BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 041259
         (257 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 171/257 (66%), Positives = 212/257 (82%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K+IK D+ L+GTI+WGLC ESK E+ K++++EMKE+G+ AN VI TTLMDAYFKAG 
Sbjct: 368 MREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGN 427

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA++LL+EM D   EVTVVTFC LIDGLCK GLV+EAI YFGRMPD  L PNVAVYTA
Sbjct: 428 RTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTA 487

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK NCI  A+ LFDEM  ++MIPD  AYTA+IDG LKH +F+EALN++N+M E+G
Sbjct: 488 LIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMG 547

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++LDL AYTSLVWGLS+CG +Q+AR    EMIG+GI+PDE LC  LL+KHYE GN+DEAI
Sbjct: 548 IELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAI 607

Query: 241 ELQNEMMGRGLLSGSKN 257
           ELQNE++ +GL+ G+ N
Sbjct: 608 ELQNELVEKGLIHGNSN 624



 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 130/246 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I   +  Y  +I  +C E     ++ L  +MK+ GLT + V   TL+D Y K G 
Sbjct: 123 MVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGL 182

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E++ L +EM     E  V+T+  LI+  CK   +  A ++F  M D  L PNV  Y+ 
Sbjct: 183 LDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYST 242

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK+  ++ A   F +M +  ++P+   Y++LID   K  +  EA  L + M +  
Sbjct: 243 LIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEH 302

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           VDL++  YT+L+ GL   G + EA  LF  M   G+ P+     +L+  H +  +MD+A+
Sbjct: 303 VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAM 362

Query: 241 ELQNEM 246
           EL NEM
Sbjct: 363 ELFNEM 368



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 149/321 (46%), Gaps = 70/321 (21%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K++K ++  Y T+I  LC E   + +     +M   GL  N    ++L+DA  KAG 
Sbjct: 228 MKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGN 287

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   +++ +VT+  L+DGLC+ G++ EA + F  M   G+ PN+  YTA
Sbjct: 288 LGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTA 347

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDT------------------------------ 150
           LI G  K   +++A  LF+EM ++D+ PD                               
Sbjct: 348 LIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESG 407

Query: 151 -----TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE-- 203
                  YT L+D Y K  +  EA+NL   M ++G ++ +  + +L+ GL + G +QE  
Sbjct: 408 IGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAI 467

Query: 204 ---------------------------------ARVLFHEMIGRGILPDEILCISLLKKH 230
                                            A+ LF EM  + ++PD+I   +++  +
Sbjct: 468 YYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGN 527

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + GN  EA+ ++N+MM  G+
Sbjct: 528 LKHGNFQEALNMRNKMMEMGI 548



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 131/285 (45%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D+  Y T+I G       ++S  L  EMK  G   + +    L++++ K   
Sbjct: 158 MKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKG 217

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------ 114
              A     EM D  ++  V+++  LID LCK G+++ AI +F  M   GL PN      
Sbjct: 218 MLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSS 277

Query: 115 -----------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                        +  YT L+DGLC++  +  A  LF  M K  
Sbjct: 278 LIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAG 337

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+  AYTALI G++K  S  +A+ L N M E  +  D+  + ++VWGL     L+E +
Sbjct: 338 VTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECK 397

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++  EM   GI  + ++  +L+  +++ GN  EAI L  EM   G
Sbjct: 398 IIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLG 442



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 99/200 (49%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C   +    KAGE   +     +M+ + I  TV T+ ++I  +CK G +  A   F +M 
Sbjct: 100 CNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMK 159

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             GL P++  Y  LIDG  K   ++ +  LF+EM      PD   Y ALI+ + K +   
Sbjct: 160 KMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGML 219

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A      M +  +  ++ +Y++L+  L + G +Q A   F +M   G+LP+E    SL+
Sbjct: 220 RAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLI 279

Query: 228 KKHYERGNMDEAIELQNEMM 247
             + + GN+ EA  L +EM+
Sbjct: 280 DANCKAGNLGEAFMLADEML 299



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 79/163 (48%)

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L K+G    + D+F  M   G+ P V  Y  +I  +CK+  +  AR+LF++M K  + PD
Sbjct: 107 LSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPD 166

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  LIDGY K     E++ L   M  +G + D+  Y +L+    +   +  A   F 
Sbjct: 167 IVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFR 226

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           EM  + + P+ I   +L+    + G M  AI+   +M   GLL
Sbjct: 227 EMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLL 269



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 71/170 (41%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
            F  L   L + G++  A   F RM  F + P      A +  L K    + +R+ F +M
Sbjct: 64  VFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDM 123

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
               + P    Y  +I    K      A +L  +M ++G+  D+  Y +L+ G  + G L
Sbjct: 124 VGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLL 183

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            E+  LF EM   G  PD I   +L+    +   M  A E   EM  + L
Sbjct: 184 DESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDL 233


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 158/254 (62%), Positives = 206/254 (81%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K IK DL LYGTI+WGLC ES+ E++KLL+ E+KE+G+  N VI TTLMDAYFK+G+
Sbjct: 491 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 550

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL+LL+EMLD  +  T VT+C LIDGLCKSGLV+EA+ +FGRM + GL PNVAVYTA
Sbjct: 551 ATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTA 610

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK NC E A+ LFDEM  + M+PD  AYTALIDG +KH + +EALNL++RM E+G
Sbjct: 611 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 670

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++LDL+AYT+L+WGLS  G +Q+AR L  EMIG+G+LPDE++ + L+KK+Y  G +DEA+
Sbjct: 671 MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 730

Query: 241 ELQNEMMGRGLLSG 254
           ELQNEM  RG+++G
Sbjct: 731 ELQNEMAKRGMITG 744



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 149/321 (46%), Gaps = 70/321 (21%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +K ++  Y T I   C E   +++     +M+   LT N    T+L+DA  KAG 
Sbjct: 351 MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL L++E+L + I++ VVT+  L+DGLC+ G ++EA + F  M + G+ PN   YTA
Sbjct: 411 LAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTA 470

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
           L+ G  K   +E A+++  EM ++ + PD                               
Sbjct: 471 LVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG 530

Query: 150 ----TTAYTALIDGYLKHESFKEALNLKN------------------------------- 174
                  YT L+D Y K     EAL L                                 
Sbjct: 531 INTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAM 590

Query: 175 ----RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
               RM+E+G+  ++  YT+LV GL +    + A+ LF EM+ +G++PD+I   +L+  +
Sbjct: 591 HHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGN 650

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + GN+ EA+ L++ M+  G+
Sbjct: 651 MKHGNLQEALNLRDRMIEIGM 671



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 130/253 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  +   D+  Y  +I   C   +   +   L EMK NGL  N V  +T +DA+ K G 
Sbjct: 316 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 375

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+    +M    +     T+  LID  CK+G + EA+     +   G+  NV  YTA
Sbjct: 376 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 435

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC++  ++ A  +F  M    + P+   YTAL+ G++K +  + A ++   M E  
Sbjct: 436 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 495

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y +++WGL     L+EA++L  E+   GI  + ++  +L+  +++ G   EA+
Sbjct: 496 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 555

Query: 241 ELQNEMMGRGLLS 253
            L  EM+  GL++
Sbjct: 556 TLLEEMLDLGLIA 568



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 127/246 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    IK  +  Y  +I  LC E   E ++ L ++MKE G T + V   +L+D + K G 
Sbjct: 246 MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGL 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + + ++M D+  +  V+T+  LI+  CK   + +A ++   M   GL PNV  Y+ 
Sbjct: 306 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            ID  CK+  ++ A   F +M +  + P+   YT+LID   K  +  EAL L   + + G
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 425

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L++  YT+L+ GL   G ++EA  +F  M+  G+ P++    +L+    +   M+ A 
Sbjct: 426 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 485

Query: 241 ELQNEM 246
           ++  EM
Sbjct: 486 DILKEM 491



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 101/204 (49%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  L+    K G    +     +M  + I+ +V T+ ++ID LCK G +  A   F +M 
Sbjct: 223 CNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMK 282

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           + G  P++  Y +LIDG  K   ++    +F++M   D  PD   Y ALI+ + K E   
Sbjct: 283 EAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMP 342

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A    + M   G+  ++  Y++ +    + G LQEA   F +M    + P+E    SL+
Sbjct: 343 KAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLI 402

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
             + + GN+ EA++L  E++  G+
Sbjct: 403 DANCKAGNLAEALKLVEEILQAGI 426



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 103/223 (46%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           S+    +M   G+  +      ++D   K G+   A SL  +M ++     +VT+  LID
Sbjct: 239 SRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLID 298

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           G  K GL+ E I  F +M D    P+V  Y ALI+  CK   + +A     EM    + P
Sbjct: 299 GHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKP 358

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   Y+  ID + K    +EA+     M  V +  +   YTSL+    + G+L EA  L 
Sbjct: 359 NVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLV 418

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            E++  GI  + +   +LL    E G M EA E+   M+  G+
Sbjct: 419 EEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 461



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 4/200 (2%)

Query: 51  LMDAYFKA----GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           + DA F A    G   EA     +M   R+     +   L+  L K G    +  +F  M
Sbjct: 187 VFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM 246

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G+  +V  Y  +ID LCK+  +E AR+LF +M +    PD   Y +LIDG+ K    
Sbjct: 247 GAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLL 306

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
            E + +  +M +   D D+  Y +L+    +   + +A    HEM   G+ P+ +   + 
Sbjct: 307 DECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTF 366

Query: 227 LKKHYERGNMDEAIELQNEM 246
           +    + G + EAI+   +M
Sbjct: 367 IDAFCKEGMLQEAIKFFVDM 386



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 72/170 (42%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
            F  L   L + G++ EA + F +M  F + P      AL+  L K    + +R  F +M
Sbjct: 187 VFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM 246

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
               +      Y  +ID   K    + A +L  +M E G   D+  Y SL+ G  + G L
Sbjct: 247 GAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLL 306

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            E   +F +M      PD I   +L+    +   M +A E  +EM   GL
Sbjct: 307 DECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 356


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  323 bits (829), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 154/251 (61%), Positives = 196/251 (78%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           NIK DL LYG+IIWG C + K E++KL+L EMK  G++AN VI TT++DAYFKAG+ S+A
Sbjct: 529 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 588

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L+   EM D  +E T+VT+CVLIDGLCK+G+V  A+DYF RM   GL PNVAVYT+LIDG
Sbjct: 589 LNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 648

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK NCIE A+ LFDEM  R M PD TA+TALIDG LKH + +EAL L +RMTE+ ++ D
Sbjct: 649 LCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFD 708

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           L+ YTSLV G S+CG L +AR  F+EMI +GILP+E+LCI LL+++Y+RG +DEAIEL+N
Sbjct: 709 LHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKN 768

Query: 245 EMMGRGLLSGS 255
           EM   GL++ S
Sbjct: 769 EMERMGLITES 779



 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 134/246 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I   +  Y  +I  LC E   E+S+ L  +M+E GL+ + V   +L+D Y K G 
Sbjct: 280 MIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 339

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  SL +EM D      ++T+  LI+  CK   +  A +YF  M + GL PNV  Y+ 
Sbjct: 340 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 399

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK+  ++ A  LF +M +  ++P+   YT+LID   K  +  EA  L N M + G
Sbjct: 400 LIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 459

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V L++  YT+L+ GL + G + EA  +F  M+  GI P++ +  +L+  + +   M++A+
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 519

Query: 241 ELQNEM 246
           ++  +M
Sbjct: 520 KILKQM 525



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      D+  Y  +I   C   K   +    SEMK NGL  N V  +TL+DA+ K G 
Sbjct: 350 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 409

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  +M  + +     T+  LID  CK+G + EA      M   G+  N+  YTA
Sbjct: 410 MQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 469

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +  A  +F  M K  + P+   YTAL+ GY+K E  ++A+ +  +MTE  
Sbjct: 470 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 529

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y S++WG      L+E +++  EM  RGI  + ++  +++  +++ G   +A+
Sbjct: 530 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL 589

Query: 241 ELQNEMMGRGL 251
               EM   G+
Sbjct: 590 NFFQEMQDVGV 600



 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +K ++  Y T+I   C E   + +  L  +M+  GL  N    T+L+DA  KAG 
Sbjct: 385 MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGN 444

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  LL++ML + +++ +VT+  L+DGLCK+G + EA + F  M   G+ PN  VYTA
Sbjct: 445 LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 504

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY--------------------------- 153
           L+ G  K   +E A  +  +M + ++ PD   Y                           
Sbjct: 505 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564

Query: 154 --------TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                   T +ID Y K     +ALN    M +VGV+  +  Y  L+ GL + G ++ A 
Sbjct: 565 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAV 624

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             F  M+  G+ P+  +  SL+    +   ++ A +L +EM  RG+
Sbjct: 625 DYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGM 670



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 111/225 (49%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E++    S M+          C  L+    K+G         ++M+ + I  +V T+ V+
Sbjct: 236 EEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVM 295

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           ID LCK G +  +   F +M + GL P+V  Y +LIDG  K   +E   +LF+EM     
Sbjct: 296 IDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGC 355

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           +PD   Y  LI+ Y K E    A    + M   G+  ++  Y++L+    + G +Q A  
Sbjct: 356 VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIK 415

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           LF +M   G+LP+E    SL+  + + GN+ EA +L N+M+  G+
Sbjct: 416 LFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 460



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 94/203 (46%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
            L   + + G   EA      M + R      +   L+  L KSG  +    +F  M   
Sbjct: 224 VLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA 283

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  +ID LCK+  +E +R LF +M +  + PD   Y +LIDGY K  S +E 
Sbjct: 284 GIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEV 343

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
            +L N M +VG   D+  Y  L+    +   +  A   F EM   G+ P+ +   +L+  
Sbjct: 344 ASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 403

Query: 230 HYERGNMDEAIELQNEMMGRGLL 252
             + G M  AI+L  +M   GLL
Sbjct: 404 FCKEGMMQGAIKLFVDMRRTGLL 426



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 86/181 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++A +  Y  +I GLC     E +      M   GL  N  + T+L+D   K   
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L DEM    +   +  F  LIDG  K G ++EA+    RM +  +  ++ VYT+
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 714

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G  +   + +AR  F+EM ++ ++P+      L+  Y K     EA+ LKN M  +G
Sbjct: 715 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774

Query: 181 V 181
           +
Sbjct: 775 L 775



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 76/170 (44%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
            F VL     + GL+ EA + F RM +F   P       L+  L K    +  R  F++M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
               + P    Y  +ID   K    + +  L  +M E+G+  D+  Y SL+ G  + G L
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +E   LF+EM   G +PD I    L+  + +   M  A E  +EM   GL
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGL 390



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 73/147 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++ +Y ++I GLC  +  E +K L  EM+  G+T +    T L+D   K G   EAL
Sbjct: 635 LQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEAL 694

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+  M +  IE  +  +  L+ G  + G + +A  +F  M + G+ P   +   L+   
Sbjct: 695 VLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREY 754

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTA 152
            K+  ++ A  L +EM +  +I ++  
Sbjct: 755 YKRGQLDEAIELKNEMERMGLITESAT 781


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 156/242 (64%), Positives = 197/242 (81%), Gaps = 1/242 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL LYGTIIWGLC ++K E+ + ++SEMK  G+ AN+VI T  MDAYFK G+  EAL+LL
Sbjct: 496 DLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLL 555

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN-VAVYTALIDGLCK 127
            EM D  +EVT+VTFCVLIDGLCK GLV EAIDYF RM DF L PN VAV TALIDGLCK
Sbjct: 556 QEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCK 615

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
            N IE A+ LFDEM  ++M+PD  AYTALIDG LKH+ F+EALN+++RM+E+G++LDL+A
Sbjct: 616 NNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHA 675

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YTSLVWGLS+   +Q+AR+  +EMIG+GI+PDEILCI LL+K+YE G++DEAIEL +E++
Sbjct: 676 YTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELL 735

Query: 248 GR 249
            +
Sbjct: 736 KK 737



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 123/239 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I   +  Y  +I  +C E     +K L  +MK+ GLT + V   +L+D Y K G 
Sbjct: 243 MVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGL 302

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  L +EM D   E  V+T+  LI+  CK   + +A  +   M + GL PNV  Y+ 
Sbjct: 303 LDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYST 362

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK++ +++A     +M +  + P+   YT+LID   K     +AL L + M +V 
Sbjct: 363 LIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQ 422

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           V  ++  YT+L+ GL + G + EA  LF  MI  G+ P+     +L+  H +   ++ A
Sbjct: 423 VGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENA 481



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 137/288 (47%), Gaps = 36/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +K ++  Y T+I  LC E   + +   L +M+  GL+ N    T+L+DA  KAG 
Sbjct: 348 MKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGY 407

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+AL L DEML  ++   VVT+  L+DGLCK G + EA D F  M   G+ PN+  YTA
Sbjct: 408 LSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTA 467

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           L+                                    GLC +N +E    +  EM    
Sbjct: 468 LVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACG 527

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +  ++  YT  +D Y K     EALNL   M ++GV++ +  +  L+ GL + G ++EA 
Sbjct: 528 IRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAI 587

Query: 206 VLFHEMIGRGILPDEI-LCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             F  M    + P+ + +C +L+    +   ++ A +L +EM  + ++
Sbjct: 588 DYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMV 635



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + D+  Y  +I   C   +   +   L EMK +GL  N V  +TL+DA  K   
Sbjct: 313 MKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHM 372

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+  L +M    +     T+  LID  CK+G + +A+     M    +  NV  YT 
Sbjct: 373 LQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTT 432

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK+  +  A +LF  M K  + P+   YTAL+ G++K++  + AL L   + E  
Sbjct: 433 LLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKK 492

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y +++WGL     L+E   +  EM   GI  + ++    +  +++ G   EA+
Sbjct: 493 IKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEAL 552

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 553 NLLQEMCDLGV 563



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 107/221 (48%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E++    S M    +      C   +    K G+   +     +M+ + I  +V T+ ++
Sbjct: 199 EEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIM 258

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I  +CK G +  A   F +M   GL P++  Y +LIDG  K   ++ +  LF+EM     
Sbjct: 259 IGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGC 318

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            PD   Y ALI+ + K+E   +A +  + M   G+  ++  Y++L+  L +   LQ+A  
Sbjct: 319 EPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIK 378

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
              +M   G+ P+E    SL+  + + G + +A++L +EM+
Sbjct: 379 FLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEML 419



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 1/216 (0%)

Query: 43  ANTVICTTLMDAYF-KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           A +V    +M  Y  K G+   A SL  +M    +   +VT+  LIDG  K GL+ E+  
Sbjct: 249 AQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFC 308

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
            F  M D G  P+V  Y ALI+  CK   + +A +   EM    + P+   Y+ LID   
Sbjct: 309 LFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALC 368

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           K    ++A+     M  VG+  +   YTSL+    + G+L +A  L  EM+   +  + +
Sbjct: 369 KEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVV 428

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
              +LL    + G M EA +L   M+  G+    K 
Sbjct: 429 TYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKT 464



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 89/202 (44%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
            L   + + G   EA      M   R+     +    +  L K+G    +  +F  M   
Sbjct: 187 ALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGA 246

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+  +V  Y  +I  +CK+  +  A++LF +M +  + PD   Y +LIDGY K     E+
Sbjct: 247 GIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDES 306

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M +VG + D+  Y +L+    +   + +A    HEM   G+ P+ +   +L+  
Sbjct: 307 FCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDA 366

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             +   + +AI+   +M   GL
Sbjct: 367 LCKEHMLQQAIKFLLDMRRVGL 388



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 3/185 (1%)

Query: 70  EMLDSRIEVTVVTFCV---LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           E+L S   V V  F V   L     + G++ EA   F RM  F + P      A +  L 
Sbjct: 169 EVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLA 228

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K    + +   F +M    +      Y  +I    K      A +L ++M ++G+  D+ 
Sbjct: 229 KTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIV 288

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y SL+ G  + G L E+  LF EM   G  PD I   +L+    +   M +A    +EM
Sbjct: 289 TYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEM 348

Query: 247 MGRGL 251
              GL
Sbjct: 349 KNSGL 353


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  316 bits (810), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 149/242 (61%), Positives = 190/242 (78%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           NIK DL LYG+IIWG C + K E++KL+L EMK  G++AN VI TT++DAYFKAG+ S+A
Sbjct: 470 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 529

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L+   EM D  +E T+VT+CVLIDGLC++G+V  A+DYF RM   GL PNVAVYT+LIDG
Sbjct: 530 LNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 589

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC  NCIE A+ LFDEM  R M PD TA+TALIDG LKH + +EAL L +RMTE+ ++ D
Sbjct: 590 LCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFD 649

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           L+ YTSLV G S+CG L +AR  F+EMI +GILP+E+LCI LL+++Y+RG +DEAIEL+N
Sbjct: 650 LHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKN 709

Query: 245 EM 246
           EM
Sbjct: 710 EM 711



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 133/246 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I   +  Y  +I  LC E   E+S+ L  +M+E GL+ + V   +L+D Y K G 
Sbjct: 221 MIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGS 280

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  SL +EM D      ++T+  LI+  CK   +  A +YF  M + GL PNV  Y+ 
Sbjct: 281 LEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYST 340

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK+  ++ A  L  +M +  ++P+   YT+LID   K  +  EA  L N M + G
Sbjct: 341 LIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAG 400

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V L++  YT+L+ GL + G + EA  +F  M+  GI P++ +  +L+  + +   M++A+
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAM 460

Query: 241 ELQNEM 246
           ++  +M
Sbjct: 461 KILKQM 466



 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      D+  Y  +I   C   K   +    SEMK NGL  N V  +TL+DA+ K G 
Sbjct: 291 MKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGM 350

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ LL +M  + +     T+  LID  CK+G + EA      M   G+  N+  YTA
Sbjct: 351 MQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTA 410

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +  A  +F  M K  + P+   YTAL+ GY+K E  ++A+ +  +MTE  
Sbjct: 411 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 470

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y S++WG      L+E +++  EM  RGI  + ++  +++  +++ G   +A+
Sbjct: 471 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL 530

Query: 241 ELQNEMMGRGL 251
               EM   G+
Sbjct: 531 NFFQEMQDVGV 541



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 135/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +K ++  Y T+I   C E   + +  LL +M+  GL  N    T+L+DA  KAG 
Sbjct: 326 MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGN 385

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  LL++ML + +++ +VT+  L+DGLCK+G + EA + F  M   G+ PN  VYTA
Sbjct: 386 LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 445

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY--------------------------- 153
           L+ G  K   +E A  +  +M + ++ PD   Y                           
Sbjct: 446 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505

Query: 154 --------TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                   T +ID Y K     +ALN    M +VGV+  +  Y  L+ GL   G ++ A 
Sbjct: 506 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAV 565

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             F  M+  G+ P+  +  SL+        ++ A +L +EM  RG+
Sbjct: 566 DYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGM 611



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 110/225 (48%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E++    S M+          C  L+    K+G         ++M+ + I  +V T+ V+
Sbjct: 177 EEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVM 236

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           ID LCK G +  +   F +M + GL P+V  Y +LIDG  K   +E   +LF+EM     
Sbjct: 237 IDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGC 296

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           +PD   Y  LI+ Y K E    A    + M   G+  ++  Y++L+    + G +Q A  
Sbjct: 297 VPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIK 356

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L  +M   G+LP+E    SL+  + + GN+ EA +L N+M+  G+
Sbjct: 357 LLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 94/203 (46%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
            L   + + G   EA      M + R      +   L+  L KSG  +    +F  M   
Sbjct: 165 VLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGA 224

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  +ID LCK+  +E +R LF +M +  + PD   Y +LIDGY K  S +E 
Sbjct: 225 GIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEV 284

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
            +L N M +VG   D+  Y  L+    +   +  A   F EM   G+ P+ +   +L+  
Sbjct: 285 ASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 344

Query: 230 HYERGNMDEAIELQNEMMGRGLL 252
             + G M  AI+L  +M   GLL
Sbjct: 345 FCKEGMMQGAIKLLXDMRRTGLL 367



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 15/206 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++A +  Y  +I GLC     E +      M   GL  N  + T+L+D       
Sbjct: 536 MQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNC 595

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L DEM    +   +  F  LIDG  K G ++EA+    RM +  +  ++ VYT+
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 655

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM---- 176
           L+ G  +   + +AR  F+EM ++ ++P+      L+  Y K     EA+ LKN M    
Sbjct: 656 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMA 715

Query: 177 -----------TEVGVDLDLNAYTSL 191
                       E GV+L L+AY  L
Sbjct: 716 YSFEFDAQLAYNEQGVNLTLHAYLYL 741



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 76/170 (44%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
            F VL     + GL+ EA + F RM +F   P       L+  L K    +  R  F++M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
               + P    Y  +ID   K    + +  L  +M E+G+  D+  Y SL+ G  + G L
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +E   LF+EM   G +PD I    L+  + +   M  A E  +EM   GL
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGL 331


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  315 bits (808), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 154/258 (59%), Positives = 197/258 (76%), Gaps = 1/258 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KG+ I+ DL LYGT IWGLC   K E +K++++EM+ENG+ ANT+I TTLMDAYFK+G 
Sbjct: 369 LKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGN 428

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYT 119
           P+E L LL+EM +   EVTVVTFCVLIDGLCK+ LV +AIDYFGRM  DFGL PN AVYT
Sbjct: 429 PTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYT 488

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+IDGLCK+N ++ A  LF++M +  ++PD TAYT+L+DG LK  +  EAL L+++M E+
Sbjct: 489 AMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEI 548

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+ LDL AYTSLVWG S+C  LQ+AR    EMIG  ILPDE+LCI +LKKHYE G +DEA
Sbjct: 549 GMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEA 608

Query: 240 IELQNEMMGRGLLSGSKN 257
           + LQ+ +M   LL+   N
Sbjct: 609 VGLQSYLMKHQLLTSDNN 626



 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 136/251 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G   K  +  Y  +I  +  E   E ++ L  EMK  GL  +TV   +++D Y K G 
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + +   +EM     E  V+T+  LI+  CKSG + + ++++  M   GL PNV  Y+ 
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYST 243

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D  CK++ +++A   + +M +   +P+   YT+L+D   K  +  +A  L N M EVG
Sbjct: 244 LVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVG 303

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ ++  YT+L+ GL     ++EA  LF +M+  G++P+     +L+    +  NMD A+
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363

Query: 241 ELQNEMMGRGL 251
           EL NE+ GRG+
Sbjct: 364 ELLNELKGRGI 374



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 124/247 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  + + D+  Y ++I   C   K         EMK++GL  N V  +TL+DA+ K   
Sbjct: 194 MKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDM 253

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+    +M          T+  L+D  CK G + +A      M + G+  NV  YTA
Sbjct: 254 MQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTA 313

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC    ++ A  LF +M    +IP+  +Y ALI G++K ++   AL L N +   G
Sbjct: 314 LIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 373

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y + +WGL     ++ A+V+ +EM   GI  + ++  +L+  +++ GN  E +
Sbjct: 374 IQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGL 433

Query: 241 ELQNEMM 247
            L  EM 
Sbjct: 434 HLLEEMQ 440



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 142/322 (44%), Gaps = 71/322 (22%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +K ++  Y T++   C E   + +     +M+  G   N    T+L+DA  K G 
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGN 288

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L +EML+  +E  VVT+  LIDGLC +  ++EA   FG+M   G+ PN+A Y A
Sbjct: 289 LSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNA 348

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
           LI G  K   ++RA  L +E+  R + PD                               
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG 408

Query: 150 ----TTAYTALIDGYLKHESFKEALNL------------------------KNRMTEVGV 181
               T  YT L+D Y K  +  E L+L                        KN++    +
Sbjct: 409 IKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAI 468

Query: 182 D----------LDLNA--YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           D          L  NA  YT+++ GL +   ++ A  LF +M   G++PD     SL+  
Sbjct: 469 DYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDG 528

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
           + ++GNM EA+ L+++M   G+
Sbjct: 529 NLKQGNMLEALALRDKMAEIGM 550



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 106/226 (46%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
            E++    S+MK   +   T  C  L+  + K G+         +M+ +  + TV T+ +
Sbjct: 79  LEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNI 138

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +ID + K G +  A   F  M   GL P+   Y ++IDG  K   ++     F+EM    
Sbjct: 139 MIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS 198

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             PD   Y +LI+ + K     + L     M + G+  ++ +Y++LV    +   +Q+A 
Sbjct: 199 CEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAI 258

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             + +M   G +P+E    SL+  + + GN+ +A  L NEM+  G+
Sbjct: 259 KFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGV 304



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 73/192 (38%), Gaps = 4/192 (2%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCV---LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           E   + DE+  +R  V V  F V   L   L   G++ EA   F +M  F + P      
Sbjct: 44  EECDVFDELWSTR-NVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCN 102

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+    K    +  +  F +M      P    Y  +ID   K    + A  L   M   
Sbjct: 103 GLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFR 162

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D   Y S++ G  + G L +    F EM      PD I   SL+    + G + + 
Sbjct: 163 GLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKG 222

Query: 240 IELQNEMMGRGL 251
           +E   EM   GL
Sbjct: 223 LEFYREMKQSGL 234


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KG+ IK DL LYGT IWGLC   K E +K++++EMKE G+ AN++I TTLMDAYFK+G 
Sbjct: 366 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 425

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYT 119
           P+E L LLDEM +  IEVTVVTFCVLIDGLCK+ LV +A+DYF R+  DFGL  N A++T
Sbjct: 426 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 485

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+IDGLCK N +E A  LF++M ++ ++PD TAYT+L+DG  K  +  EAL L+++M E+
Sbjct: 486 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 545

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+ LDL AYTSLVWGLS C  LQ+AR    EMIG GI PDE+LCIS+LKKHYE G +DEA
Sbjct: 546 GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 605

Query: 240 IELQNEMMGRGLLSGSKN 257
           +ELQ+ +M   LL+   +
Sbjct: 606 VELQSYLMKHQLLTSDND 623



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 135/251 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G   +  +  Y  +I  +C E   E ++ L  EMK  GL  +TV   +++D + K G 
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + +   +EM D   E  V+T+  LI+  CK G +   ++++  M   GL PNV  Y+ 
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D  CK+  +++A   + +M +  ++P+   YT+LID   K  +  +A  L N M +VG
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ ++  YT+L+ GL     ++EA  LF +M   G++P+     +L+    +  NMD A+
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360

Query: 241 ELQNEMMGRGL 251
           EL NE+ GRG+
Sbjct: 361 ELLNELKGRGI 371



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 147/322 (45%), Gaps = 71/322 (22%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG  +K ++  Y T++   C E   + +     +M+  GL  N    T+L+DA  K G 
Sbjct: 226 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 285

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L +EML   +E  VVT+  LIDGLC +  ++EA + FG+M   G+ PN+A Y A
Sbjct: 286 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 345

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
           LI G  K   ++RA  L +E+  R + PD                               
Sbjct: 346 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 405

Query: 150 ----TTAYTALIDGYLKHESFKEALNL------------------------KNRMTEVGV 181
               +  YT L+D Y K  +  E L+L                        KN++    V
Sbjct: 406 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 465

Query: 182 D----------LDLNA--YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           D          L  NA  +T+++ GL +   ++ A  LF +M+ +G++PD     SL+  
Sbjct: 466 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 525

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
           ++++GN+ EA+ L+++M   G+
Sbjct: 526 NFKQGNVLEALALRDKMAEIGM 547



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 123/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + D+  Y  +I   C   K         EMK NGL  N V  +TL+DA+ K G 
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+    +M    +     T+  LID  CK G + +A      M   G+  NV  YTA
Sbjct: 251 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 310

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC    ++ A  LF +M    +IP+  +Y ALI G++K ++   AL L N +   G
Sbjct: 311 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 370

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y + +WGL     ++ A+V+ +EM   GI  + ++  +L+  +++ GN  E +
Sbjct: 371 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 430

Query: 241 ELQNEM 246
            L +EM
Sbjct: 431 HLLDEM 436



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 107/226 (47%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
            E++    S+MK   +   T  C  L+  + K G+  +      +M+ +    TV T+ +
Sbjct: 76  LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNI 135

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +ID +CK G V  A   F  M   GL P+   Y ++IDG  K   ++     F+EM    
Sbjct: 136 MIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 195

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             PD   Y ALI+ + K       L     M   G+  ++ +Y++LV    + G +Q+A 
Sbjct: 196 CEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAI 255

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             + +M   G++P+E    SL+  + + GN+ +A  L NEM+  G+
Sbjct: 256 KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 301



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 4/206 (1%)

Query: 51  LMDAYFKA----GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           + DA F      G   EA+    +M   R+     +   L+    K G   +   +F  M
Sbjct: 62  VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 121

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G  P V  Y  +ID +CK+  +E AR LF+EM  R ++PDT  Y ++IDG+ K    
Sbjct: 122 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 181

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
            + +     M ++  + D+  Y +L+    + G L      + EM G G+ P+ +   +L
Sbjct: 182 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 241

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLL 252
           +    + G M +AI+   +M   GL+
Sbjct: 242 VDAFCKEGMMQQAIKFYVDMRRVGLV 267



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 57/134 (42%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P   V+ AL   L     +E A   F +M +  + P T +   L+  + K     +    
Sbjct: 58  PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 117

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M   G    +  Y  ++  + + G ++ AR LF EM  RG++PD +   S++    +
Sbjct: 118 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 177

Query: 233 RGNMDEAIELQNEM 246
            G +D+ +    EM
Sbjct: 178 VGRLDDTVCFFEEM 191


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 152/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KG+ IK DL LYGT IWGLC   K E +K++++EMKE G+ AN++I TTLMDAYFK+G 
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYT 119
           P+E L LLDEM +  IEVTVVTFCVLIDGLCK+ LV +A+DYF R+  DFGL  N A++T
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+IDGLCK N +E A  LF++M ++ ++PD TAYT+L+DG  K  +  EAL L+++M E+
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+ LDL AYTSLVWGLS C  LQ+AR    EMIG GI PDE+LCIS+LKKHYE G +DEA
Sbjct: 678 GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 737

Query: 240 IELQNEMMGRGLLSGSKN 257
           +ELQ+ +M   LL+   +
Sbjct: 738 VELQSYLMKHQLLTSDND 755



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 135/251 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G   +  +  Y  +I  +C E   E ++ L  EMK  GL  +TV   +++D + K G 
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + +   +EM D   E  V+T+  LI+  CK G +   ++++  M   GL PNV  Y+ 
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D  CK+  +++A   + +M +  ++P+   YT+LID   K  +  +A  L N M +VG
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ ++  YT+L+ GL     ++EA  LF +M   G++P+     +L+    +  NMD A+
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492

Query: 241 ELQNEMMGRGL 251
           EL NE+ GRG+
Sbjct: 493 ELLNELKGRGI 503



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 123/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + D+  Y  +I   C   K         EMK NGL  N V  +TL+DA+ K G 
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+    +M    +     T+  LID  CK G + +A      M   G+  NV  YTA
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC    ++ A  LF +M    +IP+  +Y ALI G++K ++   AL L N +   G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y + +WGL     ++ A+V+ +EM   GI  + ++  +L+  +++ GN  E +
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562

Query: 241 ELQNEM 246
            L +EM
Sbjct: 563 HLLDEM 568



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 147/322 (45%), Gaps = 71/322 (22%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG  +K ++  Y T++   C E   + +     +M+  GL  N    T+L+DA  K G 
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L +EML   +E  VVT+  LIDGLC +  ++EA + FG+M   G+ PN+A Y A
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
           LI G  K   ++RA  L +E+  R + PD                               
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537

Query: 150 ----TTAYTALIDGYLKHESFKEALNL------------------------KNRMTEVGV 181
               +  YT L+D Y K  +  E L+L                        KN++    V
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597

Query: 182 D----------LDLNA--YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           D          L  NA  +T+++ GL +   ++ A  LF +M+ +G++PD     SL+  
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
           ++++GN+ EA+ L+++M   G+
Sbjct: 658 NFKQGNVLEALALRDKMAEIGM 679



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 107/225 (47%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E++    S+MK   +   T  C  L+  + K G+  +      +M+ +    TV T+ ++
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIM 268

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           ID +CK G V  A   F  M   GL P+   Y ++IDG  K   ++     F+EM     
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            PD   Y ALI+ + K       L     M   G+  ++ +Y++LV    + G +Q+A  
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + +M   G++P+E    SL+  + + GN+ +A  L NEM+  G+
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 4/206 (1%)

Query: 51  LMDAYFKA----GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           + DA F      G   EA+    +M   R+     +   L+    K G   +   +F  M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G  P V  Y  +ID +CK+  +E AR LF+EM  R ++PDT  Y ++IDG+ K    
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
            + +     M ++  + D+  Y +L+    + G L      + EM G G+ P+ +   +L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLL 252
           +    + G M +AI+   +M   GL+
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLV 399


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 143/255 (56%), Positives = 196/255 (76%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+K DL LYGT IWGLC +++ EDS  ++ EM + GLTAN+ I TTL+DAYFK G+
Sbjct: 487 MNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGK 546

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA++LL EM D  I++TVVT+ VLIDGLCK GLV++A+ YF  M   GL PN+ +YTA
Sbjct: 547 TTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTA 606

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK +C+E A+NLF+EM  + + PD   YT+LIDG +KH +  EAL+L+NRM E+G
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++LDL AYTSL+WG SR G +Q A+ L  EM+ +GI+PD++LCI LL+K+YE G+++EA+
Sbjct: 667 MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEAL 726

Query: 241 ELQNEMMGRGLLSGS 255
            L ++M  RGL+SG+
Sbjct: 727 ALHDDMARRGLISGT 741



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 125/239 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  L  E   E ++ L  EMK  GL  + V   +L+D Y K G  + A+S+ +EM 
Sbjct: 254 YNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMK 313

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+  E  V+T+  LI+  CK   + +A +Y   M   GL PNV  Y+ LID  CK   + 
Sbjct: 314 DAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLL 373

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F +M +  + P+   YT+LID   K     EA  L++ M + GV+L++  YT+L+
Sbjct: 374 EANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALL 433

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL   G ++EA  LF  ++  G   ++ +  SL   + +   M++A+++  EM  + L
Sbjct: 434 DGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNL 492



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 146/321 (45%), Gaps = 70/321 (21%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + ++ ++  Y T+I   C      ++     +M   GL  N    T+L+DA  K G+
Sbjct: 347 MKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGD 406

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L  EM  + + + +VT+  L+DGLC+ G +REA + FG +   G   N  +YT+
Sbjct: 407 LNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTS 466

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
           L  G  K   +E+A ++ +EM K+++ PD                               
Sbjct: 467 LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526

Query: 150 ----TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL---------------------- 183
               +  YT LID Y K     EA+NL   M ++G+ +                      
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAV 586

Query: 184 -------------DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
                        ++  YT+L+ GL +   L+EA+ LF+EM+ +GI PD+++  SL+  +
Sbjct: 587 RYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGN 646

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + GN  EA+ L+N M+  G+
Sbjct: 647 MKHGNPGEALSLRNRMVEIGM 667



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + D+  Y ++I   C   +   +   L  MK+ GL  N V  +TL+DA+ KAG 
Sbjct: 312 MKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGM 371

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA     +M+   ++    T+  LID  CK G + EA      M   G++ N+  YTA
Sbjct: 372 LLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTA 431

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC+   +  A  LF  + K     +   YT+L  GY+K +  ++A+++   M +  
Sbjct: 432 LLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKN 491

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y + +WGL R   ++++  +  EM+  G+  +  +  +L+  +++ G   EA+
Sbjct: 492 LKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAV 551

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 552 NLLQEMQDLGI 562



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 113/225 (50%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E+++    +M +  +      C  L+    K+ +   ALS   +M+ + +  +V T+ ++
Sbjct: 198 EEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMV 257

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I  L + G +  A   F  M   GL P++  Y +LIDG  K   +  A ++F+EM     
Sbjct: 258 IGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGC 317

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            PD   Y +LI+ + K E   +A    + M + G+  ++  Y++L+    + G L EA  
Sbjct: 318 EPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANK 377

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            F +MI  G+ P+E    SL+  + + G+++EA +L++EM   G+
Sbjct: 378 FFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGV 422



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 99/219 (45%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
              +M   GL+ +      ++    + G+   A SL +EM    +   +VT+  LIDG  
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G++  A+  F  M D G  P+V  Y +LI+  CK   I +A      M +R + P+  
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ LID + K     EA      M  VG+  +   YTSL+    + G L EA  L  EM
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              G+  + +   +LL    E G M EA EL   ++  G
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 78/154 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ ++ +Y  +I GLC     E++K L +EM + G++ + ++ T+L+D   K G 
Sbjct: 592 MTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGN 651

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EALSL + M++  +E+ +  +  LI G  + G V+ A      M   G+ P+  +   
Sbjct: 652 PGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCIC 711

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
           L+    +   I  A  L D+M +R +I  T   T
Sbjct: 712 LLRKYYELGDINEALALHDDMARRGLISGTIDIT 745



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 71/170 (41%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
            F  L + L   G++ EA   F +M  F + P V     L+  L K +    A + F +M
Sbjct: 183 VFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDM 242

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
               + P    Y  +I    +    + A +L   M   G+  D+  Y SL+ G  + G L
Sbjct: 243 VVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGML 302

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             A  +F EM   G  PD I   SL+    +   + +A E  + M  RGL
Sbjct: 303 TGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGL 352



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 62/139 (44%)

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
            P   V+  L + L     +E AR  F +M K  ++P   +   L+    K      AL+
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
               M   G+   +  Y  ++  L+R G L+ AR LF EM  +G+ PD +   SL+  + 
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297

Query: 232 ERGNMDEAIELQNEMMGRG 250
           + G +  A+ +  EM   G
Sbjct: 298 KVGMLTGAVSVFEEMKDAG 316


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 130/246 (52%), Positives = 170/246 (69%), Gaps = 1/246 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I   C      D+  L +EM + G+  N V  T L+D       P+E L LLDEM+
Sbjct: 238 YTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMV 297

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCI 131
           +  I+VTVVTFCVLIDGLCK+ LV +AIDYFGR+  DFGL  N A+YTA+IDGLCK N +
Sbjct: 298 ELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQV 357

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  LF++M ++ ++PD TAYT+L+DG  K  +  EAL L+++M E G+ LDL AYTSL
Sbjct: 358 EAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSL 417

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           VWGLS C  LQ+AR    EMIG GI PDE+LCIS+LKKHYE G ++EA+ELQ+ +M   L
Sbjct: 418 VWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYLMKHQL 477

Query: 252 LSGSKN 257
           L+   +
Sbjct: 478 LTSDND 483



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 112/212 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G   K  +  Y  +I  +C E   E ++ L  EMK  GL  +TV   +++D + K G 
Sbjct: 86  MIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGR 145

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + +   +EM D   E  V+T+  LI+  CK G + + +++F  M   GL PNV  Y+ 
Sbjct: 146 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYST 205

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D  CK+  +++A   + +M +  ++P+   YT+LID Y K  +  +A  L N M +VG
Sbjct: 206 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVG 265

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           V+ ++  YT+L+ GL    +  E   L  EM+
Sbjct: 266 VEWNVVTYTALIDGLCGWENPTEGLHLLDEMV 297



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 137/287 (47%), Gaps = 36/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  D   Y ++I G     + +D+     EMK+     + +    L++ + K G+
Sbjct: 121 MKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 180

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L    EM  + ++  VV++  L+D  CK G++++AI ++  M   GL PN   YT+
Sbjct: 181 LPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 240

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK   +  A  L +EM +  +  +   YTALIDG    E+  E L+L + M E+ 
Sbjct: 241 LIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELD 300

Query: 181 V--------------------------------DLDLNA----YTSLVWGLSRCGHLQEA 204
           +                                D  L A    YT+++ GL +   ++ A
Sbjct: 301 IKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAA 360

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             LF +M  +G++PD     SL+  ++++GN+ EA+ L+++M+  G+
Sbjct: 361 TTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGM 407



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E++    S+MK   +   T  C  L+  + K G+         +M+ +  + TV T+ ++
Sbjct: 42  EEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIM 101

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           ID +CK G V  A   F  M   GL P+   Y ++IDG  K   ++     F+EM     
Sbjct: 102 IDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 161

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            PD   Y ALI+ + K     + L     M   G+  ++ +Y++LV    + G +Q+A  
Sbjct: 162 EPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIK 221

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + +M   G++P+E    SL+  + + GN+ +A  L NEM+  G+
Sbjct: 222 FYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGV 266



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 101/223 (45%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +  K    +M   G          ++D   K G+   A  L +EM    +    VT+ 
Sbjct: 75  KTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYN 134

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            +IDG  K G + + + +F  M D    P+V  Y ALI+  CK   + +    F EM + 
Sbjct: 135 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRN 194

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + P+  +Y+ L+D + K    ++A+     M  VG+  +   YTSL+    + G+L +A
Sbjct: 195 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDA 254

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L +EM+  G+  + +   +L+       N  E + L +EM+
Sbjct: 255 FRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMV 297



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 4/206 (1%)

Query: 51  LMDAYFKA----GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           + DA F      G   EA+    +M   R+     +   L+    K G       +F  M
Sbjct: 27  VFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM 86

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G  P V  Y  +ID +CK+  +E AR LF+EM  R +IPDT  Y ++IDG+ K    
Sbjct: 87  IGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRL 146

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
            + +     M ++  + D+  Y +L+    + G L +    F EM   G+ P+ +   +L
Sbjct: 147 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTL 206

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLL 252
           +    + G M +AI+   +M   GL+
Sbjct: 207 VDAFCKEGMMQQAIKFYVDMRRVGLV 232



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 33/257 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++A+  +Y  +I GLC  ++ E +  L  +M + GL  +    T+LMD  FK G   EAL
Sbjct: 337 LQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEAL 396

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L D+M+++ +++ ++ +  L+ GL     +++A  +   M   G+HP+  +  +++   
Sbjct: 397 ALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKH 456

Query: 126 CKKNCIERARNLFDEMPKRDMI--------------PDTTAY---TALIDGYLKHE---S 165
            +  CI  A  L   + K  ++              P+   +     LID Y+ H+   S
Sbjct: 457 YELGCINEAVELQSYLMKHQLLTSDNDNALPNIYLDPNPCFFWTAEKLIDEYIVHQQELS 516

Query: 166 FKEALNLKN-RMTEVGV-DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
           F++     N    EV V  L +      VW       +   R +  EM  R         
Sbjct: 517 FEQKYFFHNAEELEVHVYKLQIKQKKKNVWSSEPGSEISCHRTIISEMGAR--------- 567

Query: 224 ISLLKKHYERGNMDEAI 240
             +  +HY  G+ D  I
Sbjct: 568 --VRVQHYNLGSADSYI 582


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 122/246 (49%), Positives = 166/246 (67%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K ++ D+ LYGT+IWGLC + K +++K LL +M   GL  NTVI TT+MDA FKAG+
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGK 495

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA++LL ++LDS  +  VVT+C LIDGLCK+G + EAI +F +M + GL PNV  YTA
Sbjct: 496 ESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTA 555

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   + +A +L +EM  + M  D   YT+LIDGY+K  + ++A  LK +M E G
Sbjct: 556 LIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESG 615

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LDL  YT  + G      +QEAR +  EMIG GI PD+ +   L++K+ + GNM+EA 
Sbjct: 616 LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEAS 675

Query: 241 ELQNEM 246
            LQNEM
Sbjct: 676 SLQNEM 681



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 141/286 (49%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      D+  Y ++I G       E+ + L+SEM+++G  A+ V    L++ + K G 
Sbjct: 226 MKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGR 285

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A S   EM    +   VVTF   +D  CK GLV+EA+  F +M   G+ PN   YT+
Sbjct: 286 MEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTS 345

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK------------------ 162
           L+DG CK   ++ A  L DEM  + ++P+   YT ++DG  K                  
Sbjct: 346 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG 405

Query: 163 ------------HESF-----KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                       H  F     + AL+L N+M   G++LD++ Y +L+WGL +   + EA+
Sbjct: 406 VKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAK 465

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L H+M G G+ P+ ++  +++   ++ G   EA+ L ++++  G 
Sbjct: 466 SLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGF 511



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 151/321 (47%), Gaps = 70/321 (21%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + + A++  + T +   C E   +++  L ++M+  G+  N    T+L+D   KAG 
Sbjct: 296 MKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 355

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE---------------------- 98
             +A+ LLDEM+   +   VVT+ V++DGLCK G V E                      
Sbjct: 356 LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTT 415

Query: 99  -------------AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                        A+D   +M + G+  +V++Y  LI GLCK   ++ A++L  +M    
Sbjct: 416 LIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCG 475

Query: 146 MIPDTTAYT-----------------------------------ALIDGYLKHESFKEAL 170
           + P+T  YT                                   ALIDG  K  S  EA+
Sbjct: 476 LRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAI 535

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           +  N+M E+G+D ++ AYT+L+ G  + G L +A  L +EMI +G+  D+++  SL+  +
Sbjct: 536 SHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGY 595

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            ++ N+ +A  L+ +M+  GL
Sbjct: 596 MKQANLQDAFALKTKMIESGL 616



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 124/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC E +  +++ L   MK  G + + V   +L+D Y K G+  E   L+ EM 
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMR 262

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S     VVT+  LI+   K G + +A  YFG M   G+  NV  ++  +D  CK+  ++
Sbjct: 263 KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQ 322

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M  R M+P+   YT+L+DG  K     +A+ L + M   G+  ++  YT +V
Sbjct: 323 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 382

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G + EA  +   M   G+  +E+L  +L+  H+   N + A++L N+M  +G+
Sbjct: 383 DGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGM 441



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 91/173 (52%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V TF ++ID LCK G + EA   F RM   G  P+V  Y +LIDG  K   +E    L  
Sbjct: 200 VFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVS 259

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM K     D   Y ALI+ + K    ++A +    M   GV  ++  +++ V    + G
Sbjct: 260 EMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEG 319

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +QEA  LF +M  RG++P+E    SL+    + G +D+AI L +EM+ +GL+
Sbjct: 320 LVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLV 372



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 89/174 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + ++  Y  +I GLC      ++    ++M+E GL  N    T L+D + K G  ++A+
Sbjct: 511 FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAM 570

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L++EM+D  + +  V +  LIDG  K   +++A     +M + GL  ++  YT  I G 
Sbjct: 571 HLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGF 630

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           C  N ++ AR +  EM    + PD T Y  LI  Y K  + +EA +L+N M  V
Sbjct: 631 CNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESV 684



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 4/168 (2%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+  L   GL+ +A+    R+    + PN      ++  L +       R LFD +P   
Sbjct: 140 LLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLP--- 196

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            +P+   +  +ID   K     EA  L  RM  +G   D+  Y SL+ G  +CG L+E  
Sbjct: 197 -VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVE 255

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
            L  EM   G   D +   +L+    + G M++A     EM  +G+++
Sbjct: 256 QLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVA 303


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  238 bits (607), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 120/246 (48%), Positives = 164/246 (66%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K ++ D+ LYGT+IWGLC   K +++K LL +M + GL  NTVI TT+MDA+FKAG+
Sbjct: 435 MKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGK 494

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA++LL ++ DS ++  VVT+C LIDGLCK+G + EAI +F +M + GL PNV VYT 
Sbjct: 495 ESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTT 554

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   + +A +L +EM  + M  D   YT+LIDG++K    + A  LK +M E G
Sbjct: 555 LIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETG 614

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LDL  YT  + G      +QEAR +  EMIG GI PD+     L++K+ + GNM+EA 
Sbjct: 615 LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEAS 674

Query: 241 ELQNEM 246
            LQNEM
Sbjct: 675 SLQNEM 680



 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      D+  Y ++I G     + E+ +LL+SEM+++G  A+ V    L++ + K G 
Sbjct: 225 MKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGW 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A S   EM    +   VVT    +D  CK GLVREA+  F +M   G+ PN   YT+
Sbjct: 285 IEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTS 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK------------------ 162
           L+DG CK   ++ A  L DEM  + ++P+   YT ++DG  K                  
Sbjct: 345 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAG 404

Query: 163 ------------HESF-----KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                       H  F     + AL+L N M   G++LD++ Y +L+WGL +   L EA+
Sbjct: 405 VKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAK 464

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L H+M   G+ P+ ++  +++   ++ G   EA+ L +++   GL
Sbjct: 465 SLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGL 510



 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 137/251 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  Y  ++ GLC E K   +  +LS M+  G+ AN ++ TTL+  +F    
Sbjct: 365 MVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKN 424

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL LL+EM +  +E+ V  +  LI GLCK   + EA     +M D GL PN  +YT 
Sbjct: 425 SERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTT 484

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D   K      A  L  ++P   + P+   Y ALIDG  K  S  EA++  ++M E+G
Sbjct: 485 IMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELG 544

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D ++  YT+L+ G  + G L +A  L +EM+ +G+  D+++  SL+  H ++G++  A 
Sbjct: 545 LDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAF 604

Query: 241 ELQNEMMGRGL 251
            L+ +M+  GL
Sbjct: 605 ALKAKMIETGL 615



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 121/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC + +  +++ L   MK  G + + V   +L+D Y K GE  E   L+ EM 
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S     VVT+  LI+   K G + +A  YFG M   G+  NV   +  +D  CK+  + 
Sbjct: 262 KSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVR 321

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M  R M+P+   YT+L+DG  K     +A+ L + M   G+  ++  YT +V
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G +  A  +   M   G+  +E+L  +L+  H+   N + A++L NEM  +G+
Sbjct: 382 DGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGM 440



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 138/286 (48%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   + A++    T +   C E    ++  L ++M+  G+  N    T+L+D   KAG 
Sbjct: 295 MKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 354

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV------------------------ 96
             +A+ LLDEM+   +   VVT+ V++DGLCK G V                        
Sbjct: 355 LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTT 414

Query: 97  -----------REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                        A+D    M + G+  +V++Y  LI GLCK   ++ A++L  +M    
Sbjct: 415 LIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCG 474

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+T  YT ++D + K     EA+ L +++ + G+  ++  Y +L+ GL + G + EA 
Sbjct: 475 LRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAI 534

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             F +M   G+ P+  +  +L+    + G++ +A+ L NEM+ +G+
Sbjct: 535 SHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGM 580



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 5/247 (2%)

Query: 7   KADLP-LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ LP ++ T++  L      +D+   L+ +++  +  NT  C  ++    +     +  
Sbjct: 129 RSALPSVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHIL---LRLARNRQG- 184

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+  + +      V TF ++ID LCK G + EA   F RM   G  P+V  Y +LIDG 
Sbjct: 185 GLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGY 244

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +E    L  EM K     D   Y ALI+ + K    ++A +    M  +GV  ++
Sbjct: 245 GKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANV 304

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
              ++ V    + G ++EA  LF +M  RG++P+E    SL+    + G +D+AI L +E
Sbjct: 305 VTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDE 364

Query: 246 MMGRGLL 252
           M+ +GL+
Sbjct: 365 MVHQGLV 371



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 4/172 (2%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
            F  L+  L   GL+ +A+    R+    + PN      ++  L +       R LF+ +
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL 194

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
           P     P+   +  +ID   K     EA  L  RM  +G   D+  Y SL+ G  +CG L
Sbjct: 195 PA----PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           +E  +L  EM   G   D +   +L+    + G +++A     EM   G+++
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMA 302


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  237 bits (605), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 117/246 (47%), Positives = 163/246 (66%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K ++ D+ LYG +I GLC   K +++K LL++M E+GL  N +I TT+MDA FK+G+
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+++L ++LDS  +  V+T+C LIDGLCK+G + EAI +F +M D GL PNV  YTA
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTA 543

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK  C+  A  LF+EM  + M  D   YTAL+DGYLK  +  +A  LK +M + G
Sbjct: 544 LVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LDL  YT  + G      + EAR +F EMIG GI PD  +   L+ K+ + GN++EAI
Sbjct: 604 LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663

Query: 241 ELQNEM 246
            LQ+EM
Sbjct: 664 SLQDEM 669



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 122/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC E +  +++ L S MKE G   + V   +L+D Y K GE  E   L++EM 
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S  +  VVT+  LI+  CK G +  A  YF  M   G+  NV  ++  +D  CK+  + 
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M  R M  +   YT LIDG  K     +A+ L + M   GV L++  YT LV
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +   + EA  +   M   G+  +E+L  +L+  H+   N ++A+ L +EM  +GL
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429



 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    KAD+  Y  +I   C   + E +    + MK  G+ AN V  +T +DA+ K G 
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  +M    + +   T+  LIDG CK+G + +AI     M   G+  NV  YT 
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK+  +  A ++   M K  +  +   YT LI G+  +++ ++AL L + M   G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++LD++ Y +L+ GL     L EA+ L  +M   G+ P+ I+  +++   ++ G + EAI
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 241 ELQNEMMGRGL 251
            +  +++  G 
Sbjct: 489 AMLQKILDSGF 499



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 150/321 (46%), Gaps = 70/321 (21%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + + A++  + T +   C E    ++  L ++M+  G+  N    T L+D   KAG 
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------ 114
             +A+ LLDEM+   + + VVT+ VL+DGLCK   V EA D    M   G+  N      
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 115 -----------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                        +++Y ALI GLC  + ++ A++L  +M +  
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463

Query: 146 MIPDTTAYT-----------------------------------ALIDGYLKHESFKEAL 170
           + P+   YT                                   ALIDG  K  S  EA+
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI 523

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           +  N+M ++G+D ++ AYT+LV GL + G L EA  LF+EM+ +G+  D+++  +LL  +
Sbjct: 524 SHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            ++GN+ +A  L+ +M+  GL
Sbjct: 584 LKQGNLHDAFALKAKMIDSGL 604



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 87/172 (50%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V TF ++ID LCK G + EA   F RM + G  P+V  + +LIDG  K   ++    L +
Sbjct: 188 VFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVE 247

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM +     D   Y ALI+ + K    + A      M   GV  ++  +++ V    + G
Sbjct: 248 EMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEG 307

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++EA  LF +M  RG+  +E     L+    + G +D+AI L +EM+ +G+
Sbjct: 308 LVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 2/151 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  ++  Y  ++ GLC      ++  L +EM   G++ + V+ T L+D Y K G 
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L  +M+DS +++ +  +   I G C   ++ EA + F  M   G+ P+ AVY  
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           LI    K   +E A +L DEM +  ++P  T
Sbjct: 649 LISKYQKLGNLEEAISLQDEMER--VLPSCT 677



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 4/168 (2%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+  L   GL+ +A+    R+ +  + PN      ++  L +       R LF+++P   
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-- 185

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   +  +ID   K     EA +L +RM E+G   D+  + SL+ G  +CG L E  
Sbjct: 186 --PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
            L  EM   G   D +   +L+    + G M+ A      M   G+++
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  237 bits (605), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 117/246 (47%), Positives = 163/246 (66%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K ++ D+ LYG +I GLC   K +++K LL++M E+GL  N +I TT+MDA FK+G+
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+++L ++LDS  +  V+T+C LIDGLCK+G + EAI +F +M D GL PNV  YTA
Sbjct: 484 VPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTA 543

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK  C+  A  LF+EM  + M  D   YTAL+DGYLK  +  +A  LK +M + G
Sbjct: 544 LVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSG 603

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LDL  YT  + G      + EAR +F EMIG GI PD  +   L+ K+ + GN++EAI
Sbjct: 604 LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAI 663

Query: 241 ELQNEM 246
            LQ+EM
Sbjct: 664 SLQDEM 669



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 122/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC E +  +++ L S MKE G   + V   +L+D Y K GE  E   L++EM 
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S  +  VVT+  LI+  CK G +  A  YF  M   G+  NV  ++  +D  CK+  + 
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M  R M  +   YT LIDG  K     +A+ L + M   GV L++  YT LV
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +   + EA  +   M   G+  +E+L  +L+  H+   N ++A+ L +EM  +GL
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    KAD+  Y  +I   C   + E +    + MK  G+ AN V  +T +DA+ K G 
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  +M    + +   T+  LIDG CK+G + +AI     M   G+  NV  YT 
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK+  +  A ++   M K  +  +   YT LI G+  +++ ++AL L + M   G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++LD++ Y +L+ GL     L EA+ L  +M   G+ P+ I+  +++   ++ G + EAI
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 241 ELQNEMMGRGL 251
            +  +++  G 
Sbjct: 489 AMLQKILDSGF 499



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 150/321 (46%), Gaps = 70/321 (21%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + + A++  + T +   C E    ++  L ++M+  G+  N    T L+D   KAG 
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------ 114
             +A+ LLDEM+   + + VVT+ VL+DGLCK   V EA D    M   G+  N      
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 115 -----------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                        +++Y ALI GLC  + ++ A++L  +M +  
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463

Query: 146 MIPDTTAYT-----------------------------------ALIDGYLKHESFKEAL 170
           + P+   YT                                   ALIDG  K  S  EA+
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAI 523

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           +  N+M ++G+D ++ AYT+LV GL + G L EA  LF+EM+ +G+  D+++  +LL  +
Sbjct: 524 SHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGY 583

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            ++GN+ +A  L+ +M+  GL
Sbjct: 584 LKQGNLHDAFALKAKMIDSGL 604



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 87/172 (50%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V TF ++ID LCK G + EA   F RM + G  P+V  + +LIDG  K   ++    L +
Sbjct: 188 VFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVE 247

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM +     D   Y ALI+ + K    + A      M   GV  ++  +++ V    + G
Sbjct: 248 EMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEG 307

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++EA  LF +M  RG+  +E     L+    + G +D+AI L +EM+ +G+
Sbjct: 308 LVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 2/159 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  ++  Y  ++ GLC      ++  L +EM   G++ + V+ T L+D Y K G 
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L  +M+DS +++ +  +   I G C   ++ EA + F  M   G+ P+ AVY  
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           LI    K   +E A +L DEM +  ++P  T      DG
Sbjct: 649 LISKYQKLGNLEEAISLQDEMER--VLPSCTDSDTATDG 685



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 4/168 (2%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+  L   GL+ +A+    R+ +  + PN      ++  L +       R LF+++P   
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-- 185

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   +  +ID   K     EA +L +RM E+G   D+  + SL+ G  +CG L E  
Sbjct: 186 --PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
            L  EM   G   D +   +L+    + G M+ A      M   G+++
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMA 291


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  229 bits (584), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 117/246 (47%), Positives = 159/246 (64%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K ++ D+ LYG +IWGLC   K +++K LL++M E GL  N VI T +MDA FKA +
Sbjct: 430 MKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARK 489

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA++LL +M+DS     +VT+C L+DGLCK+G + EAI +F +M D GL PNV  YTA
Sbjct: 490 ESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTA 549

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +++A  L DEM  + M  D    T+L+DG+LK  + ++A  LK +M   G
Sbjct: 550 LVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSG 609

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LDL  YT  VWG      +QEAR +  EMI  GI PD ++   L+ K  + GNM+EA 
Sbjct: 610 LQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAA 669

Query: 241 ELQNEM 246
            LQNEM
Sbjct: 670 ILQNEM 675



 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 137/251 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  Y  ++ GLC E K  +++ +   M+  G+ AN ++ TTL+  +F    
Sbjct: 360 MVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKN 419

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              ALSLL EM D  +E+ V  +  LI GLC    + EA     +M + GL PN  +YT 
Sbjct: 420 SERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTN 479

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D   K      A  L  +M      P+   Y AL+DG  K  S  EA++  N+M ++G
Sbjct: 480 IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG 539

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++ AYT+LV GL + G L +A +L  EMI +G+  D ++C SL+  H ++GN+ +A 
Sbjct: 540 LEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAF 599

Query: 241 ELQNEMMGRGL 251
            L+ +M+  GL
Sbjct: 600 ALKAKMINSGL 610



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 135/251 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G   + D+  Y  ++   C   + E +    +EMK  G+ AN V  +T +DA+ K G 
Sbjct: 255 MRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGM 314

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  +M    ++   VT+  L+DG CK+G + +A+     M   G+  NV  YT 
Sbjct: 315 VREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTV 374

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK+  +  A ++F  M +  +  +   YT LI G+  +++ + AL+L + M + G
Sbjct: 375 LVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKG 434

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++LD++ Y +L+WGL     L EA+ L ++M   G+ P+ ++  +++   ++     EAI
Sbjct: 435 MELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAI 494

Query: 241 ELQNEMMGRGL 251
            L  +MM  G 
Sbjct: 495 ALLQKMMDSGF 505



 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 121/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC E    +++ LL+ MK  G + + V   +L+D Y K GE  E   L+ EM 
Sbjct: 197 FNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMR 256

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VVT+  L++  CK G +  A  YF  M   G+  NV  ++  +D  CK   + 
Sbjct: 257 GCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVR 316

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M  + M P+   YT L+DG  K     +AL L N M + GV L++  YT LV
Sbjct: 317 EAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLV 376

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G + EA  +F  M   GI  +E+L  +L+  H+   N + A+ L +EM  +G+
Sbjct: 377 DGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGM 435



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + + A++  + T +   C      ++  L ++M+  G+  N V  T L+D   KAG 
Sbjct: 290 MKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGR 349

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L +EM+   + + VVT+ VL+DGLCK G V EA D F  M   G+  N  +YT 
Sbjct: 350 LDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTT 409

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G       ERA +L  EM  + M  D + Y ALI G    +   EA +L N+M E G
Sbjct: 410 LIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG 469

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+++    +     EA  L  +M+  G  P+ +   +L+    + G++DEAI
Sbjct: 470 LKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAI 529

Query: 241 ELQNEMMGRGL 251
              N+M+  GL
Sbjct: 530 SHFNKMVDLGL 540



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 4/168 (2%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+  L   GL+ +A+    R+ +  + PN      ++  L ++   E A  LF+++P   
Sbjct: 134 LLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLPA-- 191

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   +  +ID   K     EA  L  RM  +G   D+  Y SL+ G  +CG L+E  
Sbjct: 192 --PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVE 249

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
            L  EM G G  PD +   +L+    + G M+ A     EM   G+++
Sbjct: 250 KLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMA 297



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 65/139 (46%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           PNV  +  +ID LCK+  +  AR L   M      PD   Y +LIDGY K    +E   L
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M   G   D+  Y +LV    + G ++ A   F EM   G++ + +   + +    +
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCK 311

Query: 233 RGNMDEAIELQNEMMGRGL 251
            G + EA++L  +M  +G+
Sbjct: 312 NGMVREAMKLFAQMRMKGM 330


>gi|224099659|ref|XP_002311568.1| predicted protein [Populus trichocarpa]
 gi|222851388|gb|EEE88935.1| predicted protein [Populus trichocarpa]
          Length = 312

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 96/146 (65%), Positives = 117/146 (80%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           IE TVVTFC LIDGLCK GLV+EAI YFGRMPDF L PNVAVYTAL+DGLCK NCI  A+
Sbjct: 70  IEATVVTFCALIDGLCKRGLVQEAIYYFGRMPDFDLQPNVAVYTALLDGLCKNNCIGAAK 129

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            LFDEM  ++ IPD  AYT +IDG LKH +F+EALN++ +M E+G++LDL+  T+L WGL
Sbjct: 130 KLFDEMQDKNTIPDKIAYTVIIDGNLKHGNFQEALNMRIKMMEMGIELDLHTCTALAWGL 189

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEI 221
           S+CG +Q+AR    EMIG+GI+PDE 
Sbjct: 190 SQCGQVQQARKFLAEMIGKGIIPDEF 215



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G  I+A +  +  +I GLC     +++      M +  L  N  + T L+D   K    
Sbjct: 66  EGLGIEATVVTFCALIDGLCKRGLVQEAIYYFGRMPDFDLQPNVAVYTALLDGLCKNNCI 125

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
             A  L DEM D       + + V+IDG  K G  +EA++   +M + G+  ++   TAL
Sbjct: 126 GAAKKLFDEMQDKNTIPDKIAYTVIIDGNLKHGNFQEALNMRIKMMEMGIELDLHTCTAL 185

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPD 149
             GL +   +++AR    EM  + +IPD
Sbjct: 186 AWGLSQCGQVQQARKFLAEMIGKGIIPD 213


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  210 bits (535), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 109/272 (40%), Positives = 165/272 (60%), Gaps = 23/272 (8%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK ++  Y  ++ GLC E + ++++ +   M   G+  N    T L+  + KA E   A 
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 286

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL---- 121
            +L EM +  I+  ++ +  ++ GLC    + EA    G + + G++ N  +YT L    
Sbjct: 287 DILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAY 346

Query: 122 -------------------IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
                              +DGLCK NC E A+ LFDEM  + M+PD  AYTALIDG +K
Sbjct: 347 FKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMK 406

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           H + +EALNL++RM E+G++LDL+AYT+L+WGLS  G +Q+AR L  EMIG+G+LPDE++
Sbjct: 407 HGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVV 466

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
            + L+KK+Y  G +DEA+ELQNEM  RG+++G
Sbjct: 467 YMCLIKKYYALGKVDEALELQNEMAKRGMITG 498



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 127/246 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    IK  +  Y  +I  LC E   E ++ L ++MKE G T + V   +L+D + K G 
Sbjct: 47  MGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGL 106

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + + ++M D+  +  V+T+  LI+  CK   + +A ++   M   GL PNV  Y+ 
Sbjct: 107 LDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYST 166

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            ID  CK+  ++ A   F +M +  + P+   YT+LID   K  +  EAL L   + + G
Sbjct: 167 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG 226

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L++  YT+L+ GL   G ++EA  +F  M+  G+ P++    +L+    +   M+ A 
Sbjct: 227 IKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAK 286

Query: 241 ELQNEM 246
           ++  EM
Sbjct: 287 DILKEM 292



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 126/247 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  +   D+  Y  +I   C   +   +   L EMK NGL  N V  +T +DA+ K G 
Sbjct: 117 MKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGM 176

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+    +M    +     T+  LID  CK+G + EA+     +   G+  NV  YTA
Sbjct: 177 LQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTA 236

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC++  ++ A  +F  M    + P+   YTAL+ G++K +  + A ++   M E  
Sbjct: 237 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 296

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y +++WGL     L+EA++L  E+   GI  + ++  +L+  +++ G   EA+
Sbjct: 297 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356

Query: 241 ELQNEMM 247
            L  EM+
Sbjct: 357 TLLEEML 363



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 101/204 (49%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  L+    K G    +     +M  + I+ +V T+ ++ID LCK G +  A   F +M 
Sbjct: 24  CNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMK 83

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           + G  P++  Y +LIDG  K   ++    +F++M   D  PD   Y ALI+ + K E   
Sbjct: 84  EAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMP 143

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A    + M   G+  ++  Y++ +    + G LQEA   F +M    + P+E    SL+
Sbjct: 144 KAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLI 203

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
             + + GN+ EA++L  E++  G+
Sbjct: 204 DANCKAGNLAEALKLVEEILQAGI 227



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 103/223 (46%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           S+    +M   G+  +      ++D   K G+   A SL  +M ++     +VT+  LID
Sbjct: 40  SRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLID 99

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           G  K GL+ E I  F +M D    P+V  Y ALI+  CK   + +A     EM    + P
Sbjct: 100 GHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKP 159

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   Y+  ID + K    +EA+     M  V +  +   YTSL+    + G+L EA  L 
Sbjct: 160 NVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLV 219

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            E++  GI  + +   +LL    E G M EA E+   M+  G+
Sbjct: 220 EEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV 262



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 67/157 (42%)

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
           ++ EA + F +M  F + P      AL+  L K    + +R  F +M    +      Y 
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +ID   K    + A +L  +M E G   D+  Y SL+ G  + G L E   +F +M   
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              PD I   +L+    +   M +A E  +EM   GL
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGL 157


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 108/183 (59%), Positives = 141/183 (77%), Gaps = 1/183 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG+ IK DL LYGT IW LC   K E +K++++EM+E G+ ANT I TTLMDAYFK+  
Sbjct: 369 MKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSEN 428

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYT 119
           PSE L LL+EML+  IEVT VTFCVLIDGLCK+ LV +AIDYFGR+  DFGL  N A+YT
Sbjct: 429 PSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYT 488

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+IDGLCK++ +E A  LF++M ++ ++PD TAYT+LIDG LK  +  +AL L+++M E+
Sbjct: 489 AMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEI 548

Query: 180 GVD 182
           GV+
Sbjct: 549 GVE 551



 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 138/251 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G   K  +  Y  +I  +C E   E +  L  EMK  GL  +TV   +++D Y K G 
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGR 183

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + +   +EM     E  V+T+  LI+  CK G + + +++F  M   GL PNV  Y+ 
Sbjct: 184 LDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYST 243

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D  CK++ +++A   + +M +  ++P+   YT+L+D Y K  +  +A  L + M++VG
Sbjct: 244 LVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVG 303

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ ++  YT+L+ GL     ++EA  LF +M+  G++P+     +L+    +  NMD A+
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363

Query: 241 ELQNEMMGRGL 251
           EL +EM GRG+
Sbjct: 364 ELLDEMKGRGI 374



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 148/327 (45%), Gaps = 71/327 (21%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +K ++  Y T++   C E   + +     +M+  GL  N    T+L+DAY K G 
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGN 288

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L DEM    +E  VVT+  LIDGLC    ++EA + FG+M   G+ PN+A YTA
Sbjct: 289 LSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTA 348

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
           LI G  K   ++RA  L DEM  R + PD                               
Sbjct: 349 LIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKG 408

Query: 150 ----TTAYTALIDGYLKHESFKEALNL------------------------KNRMTEVGV 181
               T  YT L+D Y K E+  E L+L                        KN++    +
Sbjct: 409 IKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAI 468

Query: 182 D----------LDLNA--YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           D          L  NA  YT+++ GL +   ++ A  LF +M  +G++PD     SL+  
Sbjct: 469 DYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDG 528

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGSK 256
             ++GN+ +A+ L+++M   G+ SG++
Sbjct: 529 KLKQGNVVQALALRDKMAEIGVESGAR 555



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  D   Y ++I G     + +D+     EMK      + +   TL++ + K G+
Sbjct: 159 MKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGK 218

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L    EM  S ++  VV++  L+D  CK  ++++A+ ++  M   GL PN   YT+
Sbjct: 219 LPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTS 278

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D  CK   +  A  L DEM +  +  +   YTALIDG    E  KEA  L  +M   G
Sbjct: 279 LVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAG 338

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +L +YT+L+ G  +  ++  A  L  EM GRGI PD +L  + +        ++ A 
Sbjct: 339 VIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAK 398

Query: 241 ELQNEMMGRGL 251
            + NEM  +G+
Sbjct: 399 VVMNEMQEKGI 409



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 118/235 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  + + D+  Y T+I   C   K         EMK++GL  N V  +TL+DA+ K   
Sbjct: 194 MKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDM 253

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL    +M    +     T+  L+D  CK G + +A      M   G+  NV  YTA
Sbjct: 254 MQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTA 313

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC    I+ A  LF +M    +IP+  +YTALI G++K ++   AL L + M   G
Sbjct: 314 LIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRG 373

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           +  DL  Y + +W L     ++ A+V+ +EM  +GI  +  +  +L+  +++  N
Sbjct: 374 IKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSEN 428



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 62/169 (36%)

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           F  L   L +  +  EA+  F +M    + P       L+    +    +  +  F +M 
Sbjct: 66  FDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMI 125

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
                P    Y  +ID   K    + A  L   M   G+  D   Y S++ G  + G L 
Sbjct: 126 GAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLD 185

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    F EM      PD I   +L+    + G + + +E   EM   GL
Sbjct: 186 DTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGL 234


>gi|255570073|ref|XP_002525999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534731|gb|EEF36423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 557

 Score =  160 bits (405), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 140/256 (54%), Gaps = 5/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ ++ + D+  YG +I GL    + +    ++ +M  NGL  + V+ TTLM A+FKAG 
Sbjct: 207 MRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLMHAHFKAGN 266

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  E+L+   E   VT   LIDGLCK G   +A  YF +        N   YTA
Sbjct: 267 TKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKE-----KANEVSYTA 321

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG+CK+  ++    +  EM +   +PD   YT+ I    +     EA  +KN+M E G
Sbjct: 322 LIDGICKEGNLDEVERVVMEMSESGFVPDKFVYTSWIAELCRQGKIVEAFKVKNKMVEEG 381

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +DLDL  Y+SL++GL+  G + EA+ LF +M+ RGI+PD ++   L++ + ++ N     
Sbjct: 382 IDLDLLTYSSLIFGLANKGLMIEAKQLFDDMLKRGIIPDSMVFDILIRGYLKQDNPVAIS 441

Query: 241 ELQNEMMGRGLLSGSK 256
            L  EM  RGLL+  K
Sbjct: 442 HLHEEMRRRGLLTIDK 457



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 115/247 (46%), Gaps = 5/247 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT I  LC     +       EM+++G+  N +  T L+D Y K G    A  L  +M 
Sbjct: 79  YGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDGYSKIGNLDFAYQLYKDMC 138

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S     V T+  LI+G CK G++  A  +F +M + G+ PN  VYT++IDG  KK  I+
Sbjct: 139 KSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPNSTVYTSIIDGHFKKGNID 198

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F EM K     D  AY  +I G + +    + L +   M   G+  D    T+L+
Sbjct: 199 VAMKYFSEMRKESFRLDIVAYGVVISGLVNNGRLDKVLEVMEDMVRNGLAPDKVVLTTLM 258

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA-----IELQNEMM 247
               + G+ + A  ++ E++ RG  PD +   SL+    + G   +A      E  NE+ 
Sbjct: 259 HAHFKAGNTKAAYGVYRELLNRGFEPDAVTISSLIDGLCKDGRYHDAKGYFCKEKANEVS 318

Query: 248 GRGLLSG 254
              L+ G
Sbjct: 319 YTALIDG 325



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   + V   +L+D Y K G+  EA   +  + ++   V +V+F  L +G CK  +  E 
Sbjct: 2   GSLPDIVTYNSLIDGYCKYGQVEEACLTIKRIRNAECRVDLVSFNALFNGFCKRKMKEEV 61

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
             Y G M    L PNV  Y   ID LCK   ++     F EM K  ++P+  A+T LIDG
Sbjct: 62  FIYMGLMWKCCL-PNVITYGTWIDTLCKVGDLDTGYKFFKEMRKDGIVPNLIAFTCLIDG 120

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           Y K  +   A  L   M +     ++  Y +L+ G  + G L+ A   F +M+  GI+P+
Sbjct: 121 YSKIGNLDFAYQLYKDMCKSMHLPNVYTYAALINGFCKRGMLERAEWFFLKMLEVGIMPN 180

Query: 220 EILCISLLKKHYERGNMDEAIELQNEM 246
             +  S++  H+++GN+D A++  +EM
Sbjct: 181 STVYTSIIDGHFKKGNIDVAMKYFSEM 207


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 146/254 (57%), Gaps = 5/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  YG II GLC   K +++  ++ +M+++ L  + VI TT+M+AYFK+G 
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+++  ++++   E  VV    +IDG+ K+G + EAI YF          N  +YT 
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE-----KANDVMYTV 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK+        LF ++ +  ++PD   YT+ I G  K  +  +A  LK RM + G
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LDL AYT+L++GL+  G + EAR +F EM+  GI PD  +   L++ + + GNM  A 
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAAS 528

Query: 241 ELQNEMMGRGLLSG 254
           +L  +M  RGL++ 
Sbjct: 529 DLLLDMQRRGLVTA 542



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 112/210 (53%)

Query: 42  TANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           + N V  +T +D + K+GE   AL     M    +   VVTF  LIDG CK+G +  A+ 
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
            +  M    +  NV  YTALIDG CKK  ++RA  ++  M +  + P++  YT +IDG+ 
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +      A+    +M   G+ LD+ AY  ++ GL   G L+EA  +  +M    ++PD +
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  +++  +++ G M  A+ + ++++ RG 
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGF 369



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 138/305 (45%), Gaps = 65/305 (21%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T I   C   + + +      MK + L+ N V  T L+D Y KAG+   A+SL  EM 
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID--------- 123
             R+ + VVT+  LIDG CK G ++ A + + RM +  + PN  VYT +ID         
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285

Query: 124 --------------------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                     GLC    ++ A  + ++M K D++PD   +T ++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV----------- 206
           + Y K    K A+N+ +++ E G + D+ A ++++ G+++ G L EA V           
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM 405

Query: 207 -------------------LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
                              LF ++   G++PD+ +  S +    ++GN+ +A +L+  M+
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465

Query: 248 GRGLL 252
             GLL
Sbjct: 466 QEGLL 470



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 120/242 (49%), Gaps = 4/242 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + +++  +C   + + ++ ++  M   G   + +   +L+D + + G+   A  +L+ + 
Sbjct: 59  FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118

Query: 73  DSR---IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
            S     +  +V+F  L +G  K  ++ E   Y G M      PNV  Y+  ID  CK  
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSG 177

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++ A   F  M +  + P+   +T LIDGY K    + A++L   M  V + L++  YT
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +L+ G  + G +Q A  ++  M+   + P+ ++  +++   ++RG+ D A++   +M+ +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297

Query: 250 GL 251
           G+
Sbjct: 298 GM 299



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 4/168 (2%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           +F  ++  +CK G V+ A D    MP FG  P+V  Y +LIDG C+   I  A  + + +
Sbjct: 58  SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117

Query: 142 PKRDMI---PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
                    PD  ++ +L +G+ K +   E       M +     ++  Y++ +    + 
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKS 176

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           G LQ A   FH M    + P+ +    L+  + + G+++ A+ L  EM
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 134/252 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  D   Y ++I GLC   K  +++ L SEM   GL  + V  T L+D Y KAGE
Sbjct: 383 MKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGE 442

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SL ++M++  +   VVT+  L+DGLCK G V  A +    M + GL PNV  Y A
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNA 502

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   IE+A  L +EM      PDT  YT ++D Y K     +A  L   M + G
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  +  L+ G    G L++   L   M+ +GI+P+     SL+K++  R NM   I
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATI 622

Query: 241 ELQNEMMGRGLL 252
           E+   M  +G++
Sbjct: 623 EIYKGMHAQGVV 634



 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 133/255 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y  +I GLC     E +  L+ EM   G   +T+  TT+MDAY K GE
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  LL  MLD  ++ T+VTF VL++G C SG++ +       M D G+ PN   + +
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C +N +     ++  M  + ++PDT  Y  LI G+ K  + KEA  L   M E G
Sbjct: 608 LMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             L   +Y SL+ G  +    +EAR LF EM   G + ++ +    +  +YE GN +  +
Sbjct: 668 FSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTL 727

Query: 241 ELQNEMMGRGLLSGS 255
           EL +E + + L+  +
Sbjct: 728 ELCDEAIEKCLVKKT 742



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 135/251 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ K +K +   Y +II  LC   +  +++ +L  MK   +  + V+ TTL+  + K+G 
Sbjct: 313 LQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGN 372

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S    L DEM   +I    VT+  +I GLC++G V EA   F  M   GL P+   YTA
Sbjct: 373 VSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTA 432

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   ++ A +L ++M ++ + P+   YTAL+DG  K      A  L + M+E G
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ GL + G++++A  L  EM   G  PD I   +++  + + G M +A 
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAH 552

Query: 241 ELQNEMMGRGL 251
           EL   M+ +GL
Sbjct: 553 ELLRIMLDKGL 563



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 121/238 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  I+ G C   +      L+ E++  GL  N     +++    K G   EA  +L
Sbjct: 286 DVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVL 345

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M + RI    V +  LI G  KSG V      F  M    + P+   YT++I GLC+ 
Sbjct: 346 RVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQA 405

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  AR LF EM  + + PD   YTALIDGY K    KEA +L N+M E G+  ++  Y
Sbjct: 406 GKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTY 465

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           T+LV GL +CG +  A  L HEM  +G+ P+     +L+    + GN+++A++L  EM
Sbjct: 466 TALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM 523



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 126/255 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  D  +Y T+I G            L  EMK   +  + V  T+++    +AG+
Sbjct: 348 MKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGK 407

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EML   ++   VT+  LIDG CK+G ++EA     +M + GL PNV  YTA
Sbjct: 408 VVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTA 467

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   ++ A  L  EM ++ + P+   Y ALI+G  K  + ++A+ L   M   G
Sbjct: 468 LVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAG 527

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   YT+++    + G + +A  L   M+ +G+ P  +    L+      G +++  
Sbjct: 528 FFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGE 587

Query: 241 ELQNEMMGRGLLSGS 255
            L   M+ +G++  +
Sbjct: 588 RLIKWMLDKGIMPNA 602



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 109/220 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  E  E G+  NTV    ++    + G+  EA SLL +M        VV++ V++DG C
Sbjct: 239 VFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYC 298

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           +   + + +     +   GL PN   Y ++I  LCK   +  A  +   M  + + PD  
Sbjct: 299 QVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV 358

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LI G+ K  +      L + M    +  D   YTS++ GL + G + EAR LF EM
Sbjct: 359 VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM 418

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + +G+ PDE+   +L+  + + G M EA  L N+M+ +GL
Sbjct: 419 LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL 458



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 125/288 (43%), Gaps = 35/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K D   Y  +I G C   + +++  L ++M E GLT N V  T L+D   K GE
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGE 477

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI------DYFGRMPDF----- 109
              A  LL EM +  ++  V T+  LI+GLCK G + +A+      D  G  PD      
Sbjct: 478 VDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTT 537

Query: 110 ------------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                   GL P +  +  L++G C    +E    L   M  + 
Sbjct: 538 IMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKG 597

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+ T + +L+  Y    + +  + +   M   GV  D N Y  L+ G  +  +++EA 
Sbjct: 598 IMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAW 657

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
            L  EM+ +G         SL+K  Y+R   +EA +L  EM   G ++
Sbjct: 658 FLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIA 705



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 1/211 (0%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS-GLVREAID 101
           A+ ++         +AG   EA  L D++L+  + V+V +  + +  L  S   +R A  
Sbjct: 179 AHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFR 238

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
            F    + G+  N   Y  ++  LC+   ++ A +L  +M  R  +PD  +Y+ ++DGY 
Sbjct: 239 VFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYC 298

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           + E   + L L   +   G+  +   Y S++  L + G + EA  +   M  + I PD +
Sbjct: 299 QVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV 358

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  +L+    + GN+    +L +EM  + ++
Sbjct: 359 VYTTLISGFGKSGNVSVEYKLFDEMKRKKIV 389


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 135/251 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D   + T+I G C    F  + +L +EM +NGL+ N V  TTL+++  KAG 
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+  LD+M D  +     T+  LIDG  + G +++A      M + G  P +  Y A
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C    +E A  L  EM +R  IPD  +Y+ +I G+ +++  ++A  LK  M   G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y+SL+ GL +   L E   LF EM+  G+ PDE+   SL+  +   G++D+A+
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 241 ELQNEMMGRGL 251
            L +EM+ +G 
Sbjct: 539 RLHDEMIQKGF 549



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 116/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII   C   K  ++  LL  M   GL  N +    +++   + G+  E   +L+EM 
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             R     VTF  LI+G C  G   +A+     M   GL PNV  YT LI+ +CK   + 
Sbjct: 301 KRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA    D+M  R + P+   YT LIDG+ +    K+A  +   M E G    +  Y +L+
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G    G +++A  L  EMI RG +PD +   +++        +++A +L+ EM+ +G+
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 15/258 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G CI  + ED+  LL EM E G   + V  +T++  + +  E  +A  L  EM+
Sbjct: 416 YNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMV 475

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   V T+  LI GLCK   + E  D F  M   GL P+   YT+LI+  C +  ++
Sbjct: 476 AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLD 535

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL---------------KNRMT 177
           +A  L DEM ++   PD   Y  LI+G+ K    KEA  L                N + 
Sbjct: 536 KALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           +   +L+  +  +L+ G    G + EA  +   M+ +G   +E +   ++  H + GN++
Sbjct: 596 DNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIE 655

Query: 238 EAIELQNEMMGRGLLSGS 255
           +A  L  EM+  G    S
Sbjct: 656 KAYNLYKEMLHSGFAPHS 673



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 114/242 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y T+I  +C       +   L +M++ GL  N    TTL+D + + G 
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  ++ EM+++    T++T+  LI+G C  G + +A      M + G  P+V  Y+ 
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   +E+A  L  EM  + + PD   Y++LI G  K     E  +L   M  +G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YTSL+      G L +A  L  EMI +G  PD +    L+    ++    EA 
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573

Query: 241 EL 242
            L
Sbjct: 574 RL 575



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 108/220 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  EM E+G++ N      L+  +  AG     L    EM  +     VVT+  +ID  C
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYC 249

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K   + EA      M   GL+PN+  Y  +I+GLC++  ++    + +EM KR  +PD  
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +  LI+GY    +F +AL L   M + G+  ++  YT+L+  + + G+L  A     +M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             RG+ P+     +L+    ++G + +A ++  EM+  G 
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 15/265 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  +   Y T+I G   +   + +  ++ EM ENG T   +    L++ +   G 
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL EM++      VV++  +I G C++  + +A      M   G+ P+VA Y++
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK+  +    +LF EM    + PD   YT+LI+ Y       +AL L + M + G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL---------------CIS 225
              D+  Y  L+ G ++    +EA+ L  +++    +P+EI                 ++
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALA 608

Query: 226 LLKKHYERGNMDEAIELQNEMMGRG 250
           L+K    +G M+EA  +   M+ +G
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKG 633



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 1/216 (0%)

Query: 37  KENGLTANTVICTTLMDAYFKAGEPSE-ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           K  G     +    ++DA  +  +  + A  +  EM++S +   V T+ +LI G C +G 
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGN 218

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           +   + +FG M   G  PNV  Y  +ID  CK   I  A  L   M  + + P+  +Y  
Sbjct: 219 LEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNV 278

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +I+G  +    KE   +   M++     D   + +L+ G    G+  +A VL  EM+  G
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + P+ +   +L+    + GN++ A+E  ++M  RGL
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 79/206 (38%), Gaps = 36/206 (17%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID------------------ 123
            F +++    +  L+ +A+        +G  P V  Y A++D                  
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193

Query: 124 ------------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
                             G C    +E     F EM +   +P+   Y  +ID Y K   
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             EA  L   M   G++ +L +Y  ++ GL R G ++E   +  EM  R  +PD +   +
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGL 251
           L+  +   GN  +A+ L  EM+  GL
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGL 339



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 101/269 (37%), Gaps = 52/269 (19%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y ++I GLC + +  +   L  EM   GL  + V  T+L++AY   G+
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGL------------------------------ 90
             +AL L DEM+       +VT+ VLI+G                               
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT 593

Query: 91  --------------------CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
                               C  GL+ EA      M   G   N  VY  +I G  K   
Sbjct: 594 LIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           IE+A NL+ EM      P +    AL    L HE  +  LN     T     +   A   
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKS-LYHEGKEVELNQLLDYTLKSCRITEAALAK 712

Query: 191 LVWGL-SRCGHLQEARVLFHEMIGRGILP 218
           ++ G+ S+ G++     +  +M   G+LP
Sbjct: 713 VLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%)

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK-HESFKEALNLKN 174
           AV+  ++    + N I +A ++ +       +P   +Y A++D  ++  +S K A  +  
Sbjct: 133 AVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFK 192

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M E GV  ++  Y  L+ G    G+L+     F EM   G LP+ +   +++  + +  
Sbjct: 193 EMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLR 252

Query: 235 NMDEAIELQNEMMGRGL 251
            + EA +L   M  +GL
Sbjct: 253 KIGEAFKLLRLMALKGL 269


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 135/251 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D   + T+I G C    F  + +L +EM +NGL+ N V  TTL+++  KAG 
Sbjct: 299 MSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGN 358

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+  LD+M D  +     T+  LIDG  + G +++A      M + G  P +  Y A
Sbjct: 359 LNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C    +E A  L  EM +R  IPD  +Y+ +I G+ +++  ++A  LK  M   G
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y+SL+ GL +   L E   LF EM+  G+ PDE+   SL+  +   G++D+A+
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 241 ELQNEMMGRGL 251
            L +EM+ +G 
Sbjct: 539 RLHDEMIQKGF 549



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 116/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII   C   K  ++  LL  M   GL  N +    +++   + G+  E   +L+EM 
Sbjct: 241 YNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMS 300

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             R     VTF  LI+G C  G   +A+     M   GL PNV  YT LI+ +CK   + 
Sbjct: 301 KRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLN 360

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA    D+M  R + P+   YT LIDG+ +    K+A  +   M E G    +  Y +L+
Sbjct: 361 RAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALI 420

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G    G +++A  L  EMI RG +PD +   +++        +++A +L+ EM+ +G+
Sbjct: 421 NGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 15/258 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G CI  + ED+  LL EM E G   + V  +T++  + +  E  +A  L  EM+
Sbjct: 416 YNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMV 475

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   V T+  LI GLCK   + E  D F  M   GL P+   YT+LI+  C +  ++
Sbjct: 476 AKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLD 535

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL---------------KNRMT 177
           +A  L DEM ++   PD   Y  LI+G+ K    KEA  L                N + 
Sbjct: 536 KALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           +   +L+  +  +L+ G    G + EA  +   M+ +G   +E +   ++  H + GN++
Sbjct: 596 DNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIE 655

Query: 238 EAIELQNEMMGRGLLSGS 255
           +A  L  EM+  G    S
Sbjct: 656 KAYNLYKEMLHSGFAPHS 673



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 114/242 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y T+I  +C       +   L +M++ GL  N    TTL+D + + G 
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  ++ EM+++    T++T+  LI+G C  G + +A      M + G  P+V  Y+ 
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   +E+A  L  EM  + + PD   Y++LI G  K     E  +L   M  +G
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG 513

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YTSL+      G L +A  L  EMI +G  PD +    L+    ++    EA 
Sbjct: 514 LPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAK 573

Query: 241 EL 242
            L
Sbjct: 574 RL 575



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 126/265 (47%), Gaps = 15/265 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  +   Y T+I G   +   + +  ++ EM ENG T   +    L++ +   G 
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL EM++      VV++  +I G C++  + +A      M   G+ P+VA Y++
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK+  +    +LF EM    + PD   YT+LI+ Y       +AL L + M + G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL---------------CIS 225
              D+  Y  L+ G ++    +EA+ L  +++    +P+EI                 ++
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALA 608

Query: 226 LLKKHYERGNMDEAIELQNEMMGRG 250
           L+K    +G M+EA  +   M+ +G
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKG 633



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 108/220 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  EM E+G++ N      L+  +  AG     L    EM  +     VVT+  +ID  C
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYC 249

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K   + EA      M   GL+PN+  Y  +I+GLC++  ++    + +EM KR  +PD  
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +  LI+GY    +F +AL L   M + G+  ++  YT+L+  + + G+L  A     +M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             RG+ P+     +L+    ++G + +A ++  EM+  G 
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGF 409



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 1/216 (0%)

Query: 37  KENGLTANTVICTTLMDAYFKAGEPSE-ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           K  G     +    ++DA  +  +  + A  +  EM++S +   V T+ +LI G C +G 
Sbjct: 159 KSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGN 218

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           +   + +FG M   G  PNV  Y  +ID  CK   I  A  L   M  + + P+  +Y  
Sbjct: 219 LEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNV 278

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +I+G  +    KE   +   M++     D   + +L+ G    G+  +A VL  EM+  G
Sbjct: 279 VINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNG 338

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + P+ +   +L+    + GN++ A+E  ++M  RGL
Sbjct: 339 LSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGL 374



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 79/206 (38%), Gaps = 36/206 (17%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID------------------ 123
            F +++    +  L+ +A+        +G  P V  Y A++D                  
Sbjct: 134 VFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193

Query: 124 ------------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
                             G C    +E     F EM +   +P+   Y  +ID Y K   
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRK 253

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             EA  L   M   G++ +L +Y  ++ GL R G ++E   +  EM  R  +PD +   +
Sbjct: 254 IGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNT 313

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGL 251
           L+  +   GN  +A+ L  EM+  GL
Sbjct: 314 LINGYCNVGNFHQALVLHAEMVKNGL 339



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 101/269 (37%), Gaps = 52/269 (19%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y ++I GLC + +  +   L  EM   GL  + V  T+L++AY   G+
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGL------------------------------ 90
             +AL L DEM+       +VT+ VLI+G                               
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT 593

Query: 91  --------------------CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
                               C  GL+ EA      M   G   N  VY  +I G  K   
Sbjct: 594 LIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGN 653

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           IE+A NL+ EM      P +    AL    L HE  +  LN     T     +   A   
Sbjct: 654 IEKAYNLYKEMLHSGFAPHSVTIMALAKS-LYHEGKEVELNQLLDYTLKSCRITEAALAK 712

Query: 191 LVWGL-SRCGHLQEARVLFHEMIGRGILP 218
           ++ G+ S+ G++     +  +M   G+LP
Sbjct: 713 VLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%)

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK-HESFKEALNLKN 174
           AV+  ++    + N I +A ++ +       +P   +Y A++D  ++  +S K A  +  
Sbjct: 133 AVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFK 192

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M E GV  ++  Y  L+ G    G+L+     F EM   G LP+ +   +++  + +  
Sbjct: 193 EMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLR 252

Query: 235 NMDEAIELQNEMMGRGL 251
            + EA +L   M  +GL
Sbjct: 253 KIGEAFKLLRLMALKGL 269


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 144/251 (57%), Gaps = 5/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  YG II GLC   K +++  ++ +M++  L  + +I TT+M+AYFK+G 
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGR 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+++  ++++   E  VV    +IDG+ K+G + EAI YF          N  +YT 
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTE-----KANDVMYTV 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK+        LF ++ +  ++PD   YT+ I G  K  +  +A  LK +M + G
Sbjct: 409 LIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEG 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++LDL AYT+L++GL+  G + EAR +F EM+  G+ PD  +   L++ + + GNM  A 
Sbjct: 469 LELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTAS 528

Query: 241 ELQNEMMGRGL 251
           +L  +M  RGL
Sbjct: 529 DLLLDMQTRGL 539



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 125/249 (50%), Gaps = 1/249 (0%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G   K D+  + T+  G   + K  D   +   +     + N V  +T +D + K+GE  
Sbjct: 122 GFTCKPDIVSFNTLFNGFS-KMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELK 180

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            AL   + M    +   VVTF  LIDG CK+G +   +  +  M    +  NV  YTALI
Sbjct: 181 LALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALI 240

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG CKK  ++RA  ++  M +  + P++  YT +I+G+ +      A+    +M   G+ 
Sbjct: 241 DGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD+ AY  ++ GL   G L+EA  +  +M    ++PD ++  +++  +++ G M  A+ +
Sbjct: 301 LDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNM 360

Query: 243 QNEMMGRGL 251
            ++++ RG 
Sbjct: 361 YHKLIERGF 369



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 133/281 (47%), Gaps = 30/281 (10%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  ++  +  +I G C     E    L  EM+   ++ N V  T L+D + K GE
Sbjct: 189 MKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGE 248

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +   ML+ R+E   + +  +I+G  + G    A+ +  +M + G+  ++  Y  
Sbjct: 249 MQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLC    ++ A  + ++M K D++PD   +T +++ Y K    K A+N+ +++ E G
Sbjct: 309 IISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA------------------------------RVLFHE 210
            + D+ A ++++ G+++ G L EA                                LF +
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVMYTVLIDALCKEEDFIEVERLFSK 428

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   G++PD+ +  S +    ++GN+ +A +L+ +M+  GL
Sbjct: 429 ISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGL 469



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 119/242 (49%), Gaps = 4/242 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + +++  +C   + + +  ++  M   G   + +   +L+D + + G+   A  +L+ + 
Sbjct: 59  FNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLR 118

Query: 73  DS---RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
            S     +  +V+F  L +G  K  ++ E   Y G M      PNV  Y+  ID  CK  
Sbjct: 119 ASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDMFCKSG 177

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++ A   F+ M +  + P+   +T LIDGY K    +  ++L   M  V + L++  YT
Sbjct: 178 ELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYT 237

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +L+ G  + G +Q A  ++  M+   + P+ ++  +++   ++RG+ D A++   +M+ +
Sbjct: 238 ALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQ 297

Query: 250 GL 251
           G+
Sbjct: 298 GM 299



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 3/153 (1%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL  L  +  S      VT    I  L  S     ++ +   +   G  P+ + + +++
Sbjct: 4   EALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSVV 63

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA-LNLKNRMTEVGV 181
             +CK   ++ A ++   MP+    PD  +Y +LIDG+ ++   + A L L++     G 
Sbjct: 64  SFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGF 123

Query: 182 DL--DLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
               D+ ++ +L  G S+   L E  V    M+
Sbjct: 124 TCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVML 156



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/110 (21%), Positives = 48/110 (43%)

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
           +V+EA+ +  R+      P+       I  L   NC   +      +  R   P  +++ 
Sbjct: 1   MVKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFN 60

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           +++    K    K A+++ + M   G + D+ +Y SL+ G  R G ++ A
Sbjct: 61  SVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  158 bits (399), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 130/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+GK +  D   Y T++ G C E       +LLSEM   GL+ N V  TTL++   KAG 
Sbjct: 303 MRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGN 362

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A+ + D+M    +     T+  LIDG C+ GL+ EA      M   G  P+V  Y A
Sbjct: 363 LSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNA 422

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    ++ A  +   M +R + PD  +Y+ +I G+ +     +A  +K  M E G
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y+SL+ GL     L EA  LF EM+ RG+ PDE+   SL+  +   G + +A+
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKAL 542

Query: 241 ELQNEMMGRGLL 252
            L +EM+ RG L
Sbjct: 543 RLHDEMVQRGFL 554



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 126/252 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  ++  Y T+I   C + K +++  LL  M   G+ AN +   ++++     G 
Sbjct: 233 MEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGR 292

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SE   L++EM    +    VT+  L++G CK G + + +     M   GL PNV  YT 
Sbjct: 293 MSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTT 352

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+ +CK   + RA  +FD+M  R + P+   YT LIDG+ +     EA  + + M   G
Sbjct: 353 LINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSG 412

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  Y +LV G    G +QEA  +   M+ RG+ PD +   +++        + +A 
Sbjct: 413 FSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAF 472

Query: 241 ELQNEMMGRGLL 252
           +++ EM+ +G+L
Sbjct: 473 QMKEEMVEKGVL 484



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 116/226 (51%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           ++D++ +  +M  NG++ N      ++      G+  + L  + +M    I   VVT+  
Sbjct: 188 YDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LID  CK   V+EA+     M   G+  N+  Y ++I+GLC K  +     L +EM  + 
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++PD   Y  L++G+ K  +  + L L + M   G+  ++  YT+L+  + + G+L  A 
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +F +M  RG+ P+E    +L+    ++G M+EA ++ +EM+  G 
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGF 413



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 116/228 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ +   Y T+I G C +    ++  +LSEM  +G + + V    L+  Y   G 
Sbjct: 373 MRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGR 432

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +L  M++  +   VV++  +I G C+   + +A      M + G+ P+   Y++
Sbjct: 433 VQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSS 492

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC +  +  A +LF EM +R + PD   YT+LI+ Y       +AL L + M + G
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRG 552

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
              D   Y+ L+ GL++    + A+ L  ++     +PD++   +L++
Sbjct: 553 FLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE 600



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 15/267 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y ++I GLC++ K  ++  L  EM   GL  + V  T+L++AY   GE
Sbjct: 478 MVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGE 537

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+AL L DEM+        VT+ VLI+GL K    + A     ++      P+   Y  
Sbjct: 538 LSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNT 597

Query: 121 LID---------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           LI+               G C K  +  A  +F  M +R+  P+   Y  +I G+ +  +
Sbjct: 598 LIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGN 657

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             +A NL   +          A  +LV  L+R G   E   L   ++    L D  +   
Sbjct: 658 VHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKV 717

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLL 252
           L++ +++ GNMD  + +  EM   GLL
Sbjct: 718 LVEVNFKEGNMDAVLNVLTEMAKDGLL 744



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 115/251 (45%), Gaps = 10/251 (3%)

Query: 11  PLYGTIIWGLCIES----KFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAGEPS--- 62
           P   + ++ L ++S     F    L LL     +G     +    ++DA  +    +   
Sbjct: 128 PFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRD 187

Query: 63  --EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +  +M+ + +   V T+ V+I G+   G + + + +  +M   G+ PNV  Y  
Sbjct: 188 YDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CKK  ++ A  L   M    +  +  +Y ++I+G        E   L   M   G
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +LV G  + G+L +  VL  EM+G+G+ P+ +   +L+    + GN+  A+
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367

Query: 241 ELQNEMMGRGL 251
           E+ ++M  RGL
Sbjct: 368 EIFDQMRVRGL 378



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 20/246 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y T+I G C E +   +  +  EM E G+  +TV  ++L+       +
Sbjct: 443 MVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQK 502

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM+   +    VT+  LI+  C  G + +A+     M   G  P+   Y+ 
Sbjct: 503 LVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSV 562

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GL KK   + A+ L  ++   + +PD   Y  LI+            N  N      
Sbjct: 563 LINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE------------NCSNN----- 605

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +  +   LV G    G + EA  +F  M+ R   P+  +   ++  H   GN+ +A 
Sbjct: 606 ---EFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAY 662

Query: 241 ELQNEM 246
            L  E+
Sbjct: 663 NLYMEL 668



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 5/176 (2%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC-----IERARN 136
            F +++  L + G V +A+         G  P V  Y A++D L +++       + A  
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           +F +M +  + P+   Y  +I G +     ++ L    +M + G+  ++  Y +L+    
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +   ++EA  L   M   G+  + I   S++     +G M E  EL  EM G+GL+
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLV 309


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 141/254 (55%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K ++ ++  Y TI+ GLC       +  L+ EMKE GL  +T+  TTLMDAY+K GE  +
Sbjct: 349 KGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVK 408

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EMLD  ++ TVVTF VL++GLC SG + +       M + G+ PN A Y +++ 
Sbjct: 409 ARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMK 468

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             C +N +  +  ++  M  + ++PD+  Y  LI G+ K  + KEA  L   M E   +L
Sbjct: 469 QYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNL 528

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
             ++Y +L+ G  +   L EAR LF EM   G++    +    +  +YE GNM+  +EL 
Sbjct: 529 TASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELC 588

Query: 244 NEMMGRGLLSGSKN 257
           +E + + LL  ++N
Sbjct: 589 DEAIEKCLLDKARN 602



 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K +L  Y +II  LC   K  + + +L EM + G+  + VI TTL+D + K G 
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EM    I    + F  LI GL  SG V EA   F  M   G  P+   YTA
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +++A  L ++M +  + P+   YTAL DG  K      A  L + M   G
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+++ Y ++V GL + G++ +A  L  EM   G+ PD I   +L+  +Y+ G M +A 
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR 410

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RGL
Sbjct: 411 ELLREMLDRGL 421



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 129/255 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  D   +  +I GL    K  ++  L +EM + G   + V  T L+D Y K GE
Sbjct: 241 MEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGE 300

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L ++M+   +   VVT+  L DGLCKSG +  A +    M   GL  N++ Y  
Sbjct: 301 MKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNT 360

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK   I +A  L +EM +  + PDT  YT L+D Y K     +A  L   M + G
Sbjct: 361 IVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRG 420

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  +  L+ GL   G L++   L   M+ +GI+P+     S++K++  R NM  + 
Sbjct: 421 LQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIST 480

Query: 241 ELQNEMMGRGLLSGS 255
           E+   M  +G++  S
Sbjct: 481 EIYRGMCAQGVVPDS 495



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 118/227 (51%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  ++  LL  M+  G   + V  TT++D Y   GE  + + L+ EM    ++  + T+ 
Sbjct: 125 KIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYS 184

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            +I  LCKSG V E       M   G+ P+  +YT LIDG CK    + A  LF EM  R
Sbjct: 185 SIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAR 244

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           +++PD+ A++ALI G        EA  L N M + G + D   YT+L+ G  + G +++A
Sbjct: 245 EIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKA 304

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L ++M+  G+ P+ +   +L     + G +D A EL +EM  +GL
Sbjct: 305 FFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGL 351



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 115/220 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           + SE  + G+  NT     LM++ F+ G+  EA  LL  M        VV++  +IDG C
Sbjct: 97  VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYC 156

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G +++ +     M   GL PN+  Y+++I  LCK   +     +  EM KR + PD  
Sbjct: 157 HVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHV 216

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG+ K  + + A  L + M    +  D  A+++L+ GLS  G + EA  LF+EM
Sbjct: 217 IYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEM 276

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I +G  PDE+   +L+  + + G M +A  L N+M+  GL
Sbjct: 277 IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 120/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + D   Y  +I G C   + + +  L ++M + GLT N V  T L D   K+GE
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM    +++ + T+  +++GLCK+G + +A+     M + GLHP+   YT 
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D   K   + +AR L  EM  R + P    +  L++G       ++   L   M E G
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG 455

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y S++       +++ +  ++  M  +G++PD      L+K H +  NM EA 
Sbjct: 456 IMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAW 515

Query: 241 ELQNEMMGR 249
            L  EM+ +
Sbjct: 516 FLHKEMVEK 524



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 5/210 (2%)

Query: 51  LMDAYFK----AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC-KSGLVREAIDYFGR 105
           + D +F+    AG  +EA    D++L+  + ++  +  + +  L  K  ++   +  F  
Sbjct: 41  VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSE 100

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            P  G+  N   Y  L++ L +   I  A +L   M  +  IPD  +YT +IDGY     
Sbjct: 101 FPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGE 160

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            ++ + L   M   G+  +L  Y+S++  L + G + E   +  EM+ RG+ PD ++  +
Sbjct: 161 LQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTT 220

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           L+    + GN   A +L +EM  R ++  S
Sbjct: 221 LIDGFCKLGNTQAAYKLFSEMEAREIVPDS 250


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  157 bits (397), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 137/251 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K +L  Y +II  LC   K +D++ +L EM   G+  +TV+ TTL+D + K G 
Sbjct: 36  MQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGN 95

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L DEM   RI    + +  +I GLC+ G + EA   F +M   G+ P+   YT 
Sbjct: 96  IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT 155

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +E+A +L ++M +  + P+   YTAL DG  K      A  L + M   G
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L++  Y SLV GL + G++++A  L  EM   G+ PD I   +L+  + + G M +A 
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH 275

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RGL
Sbjct: 276 ELLREMLDRGL 286



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 132/245 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK ++ ++  Y +++ GLC       +  L+ EM+  G+  +T+  TTLMDAY K GE
Sbjct: 211 MCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGE 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL EMLD  ++ TV+TF VL++G C SG++ +       M + G+ PN   Y +
Sbjct: 271 MVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNS 330

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C +N +     ++  M  R ++PD+  Y  LI G+ K  + KEA  L   M E G
Sbjct: 331 LMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKG 390

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +L  ++Y S++ G  +   + EAR LF EM   G+  D  +    +   Y  GNM+ A+
Sbjct: 391 FNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETAL 450

Query: 241 ELQNE 245
           EL +E
Sbjct: 451 ELCDE 455



 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 130/255 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  D   Y  +I GLC   K  ++  + ++M   G+  + V  TTL+D Y K+GE
Sbjct: 106 MEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGE 165

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A SL ++M+ S +   VVT+  L DGLCK G V  A +    M   GL  N+  Y +
Sbjct: 166 MEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNS 225

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GLCK   I +A  L +EM    M PDT  +T L+D Y K     +A  L   M + G
Sbjct: 226 LVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG 285

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  +  L+ G    G L++   L   M+ +GI+P+     SL+K++  R NM    
Sbjct: 286 LQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTT 345

Query: 241 ELQNEMMGRGLLSGS 255
           E+   M  RG++  S
Sbjct: 346 EIYKGMCARGVMPDS 360



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    D+  Y T+I G C+  + +    L+ EM+  GL  N     +++    K+G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +L EM++  I    V +  LIDG CK G ++ A   F  M    + P+   YTA
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLC+   +  A  +F++M  R + PD   YT LIDGY K    ++A +L N+M + G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  YT+L  GL + G +  A  L HEM G+G+  +     SL+    + GN+ +A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 241 ELQNEMMGRGL 251
           +L  EM   G+
Sbjct: 241 KLMEEMEVAGM 251


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  153 bits (387), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 136/252 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y T++ G C      +S  + SEM + GL  + V  T+L+ A  KAG 
Sbjct: 107 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 166

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L+ +M +  + +  VTF  LIDG CK G + +A+     M   G+ P+V  Y A
Sbjct: 167 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 226

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ AR L  EM  + + PD   Y+ +I GY K  +   A  L  +M + G
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y+SL+ GL     L +A  LF  M+  G+ PDE    +L+  H + GN+++A+
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346

Query: 241 ELQNEMMGRGLL 252
            L +EM+ +G+L
Sbjct: 347 SLHDEMIRKGVL 358



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M+G     +   Y T++   C   + + ++ ++S M+E G    N V   ++++   KAG
Sbjct: 36  MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAG 95

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
               A  + DEM+   +   VV++  L+ G CK G + E++  F  M   GL P+V  +T
Sbjct: 96  RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 155

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LI   CK   +E+A  L  +M +R +  +   +TALIDG+ K     +AL     M + 
Sbjct: 156 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC 215

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+   +  Y +L+ G  + G +  AR L  EM  + + PD +   +++  + + GN+D A
Sbjct: 216 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 275

Query: 240 IELQNEMMGRGLL 252
            +L  +M+ +G+L
Sbjct: 276 FQLNQKMLKKGVL 288



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 5/244 (2%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE---PS 62
           +  ++  Y  ++  LC   + E++  ++ +M+  G   N V   TL+ A+ +AGE     
Sbjct: 6   VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 65

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
             +SL+ E  +   +  +VTF  +++GLCK+G +  A   F  M   GL P+V  Y  L+
Sbjct: 66  RVVSLMRE--EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 123

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G CK  C+  +  +F EM +R ++PD   +T+LI    K  + ++A+ L  +M E G+ 
Sbjct: 124 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 183

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           ++   +T+L+ G  + G L +A +   EM   GI P  +   +L+  + + G MD A EL
Sbjct: 184 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 243

Query: 243 QNEM 246
             EM
Sbjct: 244 IREM 247



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 15/264 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ +   +  +I G C +   +D+ L + EM++ G+  + V    L++ Y K G 
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 236

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+ EM   R++  VVT+  +I G CK G +  A     +M   G+ P+   Y++
Sbjct: 237 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC++  +  A  LF+ M +  + PD   YT LIDG+ K  + ++AL+L + M   G
Sbjct: 297 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 356

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI------LC---------IS 225
           V  D+  Y+ L+ GLS+    +EA  L  ++     +PD I      LC         ++
Sbjct: 357 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVA 416

Query: 226 LLKKHYERGNMDEAIELQNEMMGR 249
           LLK    +G M EA ++   M+ R
Sbjct: 417 LLKGFCMKGLMKEADKVYQSMLDR 440



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 111/217 (51%), Gaps = 1/217 (0%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M  +G+  N      L+ A    G   EA+ ++ +M  +      VT+  L+   C++G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 96  VREAIDYFGRMPDFG-LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
           +  A      M + G   PN+  + ++++GLCK   +E AR +FDEM +  + PD  +Y 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            L+ GY K     E+L + + MT+ G+  D+  +TSL+    + G+L++A  L  +M  R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G+  +E+   +L+    ++G +D+A+    EM   G+
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 217



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 15/270 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y ++I GLC E +  D+  L   M + G+  +    TTL+D + K G 
Sbjct: 282 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 341

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-- 118
             +ALSL DEM+   +   VVT+ VLI+GL KS   +EA     ++      P+   Y  
Sbjct: 342 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 401

Query: 119 -------------TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
                         AL+ G C K  ++ A  ++  M  R+   D + Y+ LI G+ +  +
Sbjct: 402 LMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 461

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            ++AL+   +M   G   +  +  SLV GL   G + EA     +++    L D     +
Sbjct: 462 VRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKA 521

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           L+  + + GN+D  I++   M   GLL  S
Sbjct: 522 LIDLNRKEGNVDALIDVLCGMARDGLLPSS 551


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 136/252 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y T++ G C      +S  + SEM + GL  + V  T+L+ A  KAG 
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L+ +M +  + +  VTF  LIDG CK G + +A+     M   G+ P+V  Y A
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ AR L  EM  + + PD   Y+ +I GY K  +   A  L  +M + G
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y+SL+ GL     L +A  LF  M+  G+ PDE    +L+  H + GN+++A+
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 241 ELQNEMMGRGLL 252
            L +EM+ +G+L
Sbjct: 489 SLHDEMIRKGVL 500



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M+G     +   Y T++   C   + + ++ ++S M+E G    N V   ++++   KAG
Sbjct: 178 MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAG 237

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
               A  + DEM+   +   VV++  L+ G CK G + E++  F  M   GL P+V  +T
Sbjct: 238 RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 297

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LI   CK   +E+A  L  +M +R +  +   +TALIDG+ K     +AL     M + 
Sbjct: 298 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC 357

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+   +  Y +L+ G  + G +  AR L  EM  + + PD +   +++  + + GN+D A
Sbjct: 358 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 417

Query: 240 IELQNEMMGRGLL 252
            +L  +M+ +G+L
Sbjct: 418 FQLNQKMLKKGVL 430



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 5/244 (2%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE---PS 62
           +  ++  Y  ++  LC   + E++  ++ +M+  G   N V   TL+ A+ +AGE     
Sbjct: 148 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 207

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
             +SL+ E  +   +  +VTF  +++GLCK+G +  A   F  M   GL P+V  Y  L+
Sbjct: 208 RVVSLMRE--EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 265

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G CK  C+  +  +F EM +R ++PD   +T+LI    K  + ++A+ L  +M E G+ 
Sbjct: 266 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 325

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           ++   +T+L+ G  + G L +A +   EM   GI P  +   +L+  + + G MD A EL
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385

Query: 243 QNEM 246
             EM
Sbjct: 386 IREM 389



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 15/264 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ +   +  +I G C +   +D+ L + EM++ G+  + V    L++ Y K G 
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+ EM   R++  VVT+  +I G CK G +  A     +M   G+ P+   Y++
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC++  +  A  LF+ M +  + PD   YT LIDG+ K  + ++AL+L + M   G
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI------LC---------IS 225
           V  D+  Y+ L+ GLS+    +EA  L  ++     +PD I      LC         ++
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVA 558

Query: 226 LLKKHYERGNMDEAIELQNEMMGR 249
           LLK    +G M EA ++   M+ R
Sbjct: 559 LLKGFCMKGLMKEADKVYQSMLDR 582



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 123/244 (50%), Gaps = 2/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
            +P Y  ++  L  ++    ++  LS M  +G+  N      L+ A    G   EA+ ++
Sbjct: 117 SVPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVV 175

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDGLCK 127
            +M  +      VT+  L+   C++G +  A      M + G   PN+  + ++++GLCK
Sbjct: 176 GDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCK 235

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +E AR +FDEM +  + PD  +Y  L+ GY K     E+L + + MT+ G+  D+  
Sbjct: 236 AGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVT 295

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +TSL+    + G+L++A  L  +M  RG+  +E+   +L+    ++G +D+A+    EM 
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR 355

Query: 248 GRGL 251
             G+
Sbjct: 356 KCGI 359



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 15/270 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y ++I GLC E +  D+  L   M + G+  +    TTL+D + K G 
Sbjct: 424 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 483

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-- 118
             +ALSL DEM+   +   VVT+ VLI+GL KS   +EA     ++      P+   Y  
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 543

Query: 119 -------------TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
                         AL+ G C K  ++ A  ++  M  R+   D + Y+ LI G+ +  +
Sbjct: 544 LMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 603

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            ++AL+   +M   G   +  +  SLV GL   G + EA     +++    L D     +
Sbjct: 604 VRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKA 663

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           L+  + + GN+D  I++   M   GLL  S
Sbjct: 664 LIDLNRKEGNVDALIDVLCGMARDGLLPSS 693


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 136/252 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y T++ G C      +S  + SEM + GL  + V  T+L+ A  KAG 
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L+ +M +  + +  VTF  LIDG CK G + +A+     M   G+ P+V  Y A
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ AR L  EM  + + PD   Y+ +I GY K  +   A  L  +M + G
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y+SL+ GL     L +A  LF  M+  G+ PDE    +L+  H + GN+++A+
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 241 ELQNEMMGRGLL 252
            L +EM+ +G+L
Sbjct: 489 SLHDEMIRKGVL 500



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M+G     +   Y T++   C   + + ++ ++S M+E G    N V   ++++   KAG
Sbjct: 178 MRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAG 237

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
               A  + DEM+   +   VV++  L+ G CK G + E++  F  M   GL P+V  +T
Sbjct: 238 RMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFT 297

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LI   CK   +E+A  L  +M +R +  +   +TALIDG+ K     +AL     M + 
Sbjct: 298 SLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC 357

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+   +  Y +L+ G  + G +  AR L  EM  + + PD +   +++  + + GN+D A
Sbjct: 358 GIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSA 417

Query: 240 IELQNEMMGRGLL 252
            +L  +M+ +G+L
Sbjct: 418 FQLNQKMLKKGVL 430



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 5/244 (2%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE---PS 62
           +  ++  Y  ++  LC   + E++  ++ +M+  G   N V   TL+ A+ +AGE     
Sbjct: 148 VAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAE 207

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
             +SL+ E  +   +  +VTF  +++GLCK+G +  A   F  M   GL P+V  Y  L+
Sbjct: 208 RVVSLMRE--EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLL 265

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G CK  C+  +  +F EM +R ++PD   +T+LI    K  + ++A+ L  +M E G+ 
Sbjct: 266 SGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 325

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           ++   +T+L+ G  + G L +A +   EM   GI P  +   +L+  + + G MD A EL
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385

Query: 243 QNEM 246
             EM
Sbjct: 386 IREM 389



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 133/264 (50%), Gaps = 15/264 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ +   +  +I G C +   +D+ L + EM++ G+  + V    L++ Y K G 
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+ EM   R++  VVT+  +I G CK G +  A     +M   G+ P+   Y++
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC++  +  A  LF+ M +  + PD   YT LIDG+ K  + ++AL+L + M   G
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI------LC---------IS 225
           V  D+  Y+ L+ GLS+    +EA  L  ++     +PD I      LC         ++
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVA 558

Query: 226 LLKKHYERGNMDEAIELQNEMMGR 249
           LLK    +G M EA ++   M+ R
Sbjct: 559 LLKGFCMKGLMKEADKVYQSMLDR 582



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 123/244 (50%), Gaps = 2/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
            +P Y  ++  L  ++    ++  LS M  +G+  N      L+ A    G   EA+ ++
Sbjct: 117 SVPAYNAVLLALS-DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVV 175

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDGLCK 127
            +M  +      VT+  L+   C++G +  A      M + G   PN+  + ++++GLCK
Sbjct: 176 GDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCK 235

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +E AR +FDEM +  + PD  +Y  L+ GY K     E+L + + MT+ G+  D+  
Sbjct: 236 AGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVT 295

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +TSL+    + G+L++A  L  +M  RG+  +E+   +L+    ++G +D+A+    EM 
Sbjct: 296 FTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR 355

Query: 248 GRGL 251
             G+
Sbjct: 356 KCGI 359



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 50/289 (17%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+  +  Y  +I G C   + + ++ L+ EM+   +  + V  +T++  Y K G 
Sbjct: 354 MRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGN 413

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  +ML   +    +T+  LI GLC+   + +A + F  M   G+ P+   YT 
Sbjct: 414 LDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTT 473

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK---------------HES 165
           LIDG CK+  +E+A +L DEM ++ ++PD   Y+ LI+G  K               HE 
Sbjct: 474 LIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHED 533

Query: 166 -----------------------------------FKEALNLKNRMTEVGVDLDLNAYTS 190
                                               KEA  +   M +    LD + Y+ 
Sbjct: 534 PVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSI 593

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           L+ G  R G++++A     +M+  G  P+    ISL++  +E G + EA
Sbjct: 594 LIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 50/221 (22%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y ++I GLC E +  D+  L   M + G+  +    TTL+D + K G 
Sbjct: 424 MLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGN 483

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS--------------------------- 93
             +ALSL DEM+   +   VVT+ VLI+GL KS                           
Sbjct: 484 VEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDA 543

Query: 94  -----------------------GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
                                  GL++EA   +  M D     + +VY+ LI G C+   
Sbjct: 544 LMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGN 603

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
           + +A +   +M +    P++T+  +L+ G  +     EA N
Sbjct: 604 VRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADN 644



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 15/173 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLM----DAYF 56
           M  K +  D+  Y  +I GL   ++ +++  LL ++       + +    LM     A F
Sbjct: 494 MIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEF 553

Query: 57  KA-----------GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
           K+           G   EA  +   MLD   ++    + +LI G C+ G VR+A+ +  +
Sbjct: 554 KSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQ 613

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           M   G  PN     +L+ GL ++  +  A N   ++     + D  A  ALID
Sbjct: 614 MLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALID 666


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 141/283 (49%), Gaps = 35/283 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I   + +Y  +I GLC ES+  +++ +   M+ +G+  N     T+MD Y K     +
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L  EML   +   VVTF +LIDGLCK+  +  A  +   M  FG+ PN+ VY  LID
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 124 GLCKKN-------------------------------C----IERARNLFDEMPKRDMIP 148
           G CK                                 C    +E A  L  EM K+  +P
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   Y  LIDGY K  + ++A+ + ++MTE G++ ++  +++L+ G  + G ++ A  L+
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM+ +G+LPD +   +L+  H++ GN  EA  L  EM   GL
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    ++  YGT+I G C +  F  +  L  EM E  +    VI T L+        
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA S+   M +S +   + T+  ++DG CK   V++A++ +  M   GL PNV  +  
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK + +  AR    +M    ++P+   Y  LIDGY K  +  EAL+L + + +  
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y+ L+ GL     ++EA  L  EM  +G LP+ +   +L+  + + GNM++AI
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 241 ELQNEMMGRGL 251
           E+ ++M  +G+
Sbjct: 424 EVCSQMTEKGI 434



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 132/265 (49%), Gaps = 17/265 (6%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+  Y  +I GLC   + E++  LL EMK+ G   N V   TL+D Y K G   +A+
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M +  IE  ++TF  LIDG CK+G +  A+  +  M   GL P+V  YTALIDG 
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD--- 182
            K    + A  L  EM +  + P+    + LIDG  K     +A+ L   + + G D   
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL--FLAKTGTDTTG 541

Query: 183 -----LDLN-------AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
                LD +        YT+L+ GL   G + +A   F +M   G+ PD   CI +++ H
Sbjct: 542 SKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGH 601

Query: 231 YERGNMDEAIELQNEMMGRGLLSGS 255
           +   ++ + + LQ +++  G++  S
Sbjct: 602 FRAMHLRDVMMLQADILKMGIIPNS 626



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 121/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  +  ++  +G +I GLC   +   ++  L +M   G+  N  +   L+D Y KAG 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEALSL  E+    I   V T+ +LI GLC    + EA      M   G  PN   Y  
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E+A  +  +M ++ + P+   ++ LIDGY K    + A+ L   M   G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ AYT+L+ G  + G+ +EA  L  EM   G+ P+      L+    + G + +AI
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528

Query: 241 EL 242
           +L
Sbjct: 529 KL 530



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 123/264 (46%), Gaps = 13/264 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K    +   Y T+I G C E   E +  + S+M E G+  N +  +TL+D Y KAG+
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  EM+   +   VV +  LIDG  K G  +EA      M + GLHPNV   + 
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC 513

Query: 121 LIDGLCKKNCIERARNLF-------------DEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           LIDGLCK   I  A  LF             +E+ +    P+   YTALI G        
Sbjct: 514 LIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIF 573

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A    + M   G+  D+     ++ G  R  HL++  +L  +++  GI+P+  +   L 
Sbjct: 574 KASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLA 633

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
           K + E G +  A+    ++ G G+
Sbjct: 634 KGYEESGYLKSALRCSEDLSGIGI 657



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 97/199 (48%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  ++D   K G       +  +M+       VVT+  LIDG C+ G   +A   F  M 
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           +  + P V +YT LI GLC ++ I  A ++F  M    M+P+   Y  ++DGY K    K
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +AL L   M   G+  ++  +  L+ GL +   +  AR    +M   G++P+  +   L+
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 228 KKHYERGNMDEAIELQNEM 246
             + + GN+ EA+ L +E+
Sbjct: 341 DGYCKAGNLSEALSLHSEI 359



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 6/182 (3%)

Query: 74  SRIEVTVVT---FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           SR+E +  T   F VLI    + GLV EA+  + +M    + P +     ++DGL KK  
Sbjct: 117 SRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLVKKGR 173

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
            +    ++ +M  R   P+   Y  LIDG  +   F +A  L + M E  +   +  YT 
Sbjct: 174 FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTI 233

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ GL     + EA  +F  M   G+LP+     +++  + +  ++ +A+EL  EM+G G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG 293

Query: 251 LL 252
           LL
Sbjct: 294 LL 295


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 142/286 (49%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   + +Y  +I GLC ES+  +++ +   M+ +G+  N     T+MD Y K   
Sbjct: 219 MIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAH 278

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L  EML   +   VVTF +LIDGLCK+  +  A  +   M  FG+ PN+ VY  
Sbjct: 279 VKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNC 338

Query: 121 LIDGLCKKN-------------------------------C----IERARNLFDEMPKRD 145
           LIDG CK                                 C    +E A  L  EM K+ 
Sbjct: 339 LIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            +P+   Y  LIDGY K  + ++A+ + ++MTE G++ ++  +++L+ G  + G ++ A 
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L+ EM+ +G+LPD +   +L+  H++ GN  EA  L  EM   GL
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    ++  YGT+I G C +  F  +  L  EM E  +    VI T L+        
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA S+   M +S +   + T+  ++DG CK   V++A++ +  M   GL PNV  +  
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGI 303

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK + +  AR    +M    ++P+   Y  LIDGY K  +  EAL+L + + +  
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y+ L+ GL     ++EA  L  EM  +G LP+ +   +L+  + + GNM++AI
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 241 ELQNEMMGRGL 251
           E+ ++M  +G+
Sbjct: 424 EVCSQMTEKGI 434



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 121/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  +  ++  +G +I GLC   +   ++  L +M   G+  N  +   L+D Y KAG 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEALSL  E+    I   V T+ +LI GLC    + EA      M   G  PN   Y  
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E+A  +  +M ++ + P+   ++ LIDGY K    + A+ L   M   G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ AYT+L+ G  + G+ +EA  L  EM   G+ P+      L+    + G + +AI
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528

Query: 241 EL 242
           +L
Sbjct: 529 KL 530



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 97/199 (48%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  ++D   K G       +  +M+       VVT+  LIDG C+ G   +A   F  M 
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           +  + P V +YT LI GLC ++ I  A ++F  M    M+P+   Y  ++DGY K    K
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +AL L   M   G+  ++  +  L+ GL +   +  AR    +M   G++P+  +   L+
Sbjct: 281 KALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 228 KKHYERGNMDEAIELQNEM 246
             + + GN+ EA+ L +E+
Sbjct: 341 DGYCKAGNLSEALSLHSEI 359



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/138 (39%), Positives = 71/138 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K    +   Y T+I G C E   E +  + S+M E G+  N +  +TL+D Y KAG+
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  EM+   +   VV +  LIDG  K G  +EA      M + GLHPNV   + 
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC 513

Query: 121 LIDGLCKKNCIERARNLF 138
           LIDGLCK   I  A  LF
Sbjct: 514 LIDGLCKDGRISDAIKLF 531



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 6/182 (3%)

Query: 74  SRIEVTVVT---FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           SR+E +  T   F VLI    + GLV EA+  + +M    + P +     ++DGL KK  
Sbjct: 117 SRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGR 173

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
            +    ++ +M  R   P+   Y  LIDG  +   F +A  L + M E  +   +  YT 
Sbjct: 174 FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTI 233

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ GL     + EA  +F  M   G+LP+     +++  + +  ++ +A+EL  EM+G G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG 293

Query: 251 LL 252
           LL
Sbjct: 294 LL 295



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 9/165 (5%)

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KS LV E       + +FG  P + + T+LI        +  A N+FDE+P +++I    
Sbjct: 644 KSSLV-EGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLI---- 698

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           ++T++I  Y+ ++   +AL L  +M    V  D+   T  +   +  G L     +   +
Sbjct: 699 SWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYI 758

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEA----IELQNEMMGRGLL 252
             RG+  D  L  SL+  + + G +  A    + L N++   G+L
Sbjct: 759 RHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVL 803



 Score = 42.0 bits (97), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 20/159 (12%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           ++  GL  +  +  +L++ Y K GE   A         S +    VTF  ++     +GL
Sbjct: 758 IRHRGLDTDLCLNNSLINMYSKCGEIGTARRF------SLVLPNDVTFMGVLMACSHAGL 811

Query: 96  VREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
           V E   +F  M  D+ L P ++ +  ++D LC+   +  A     +MP R   P+   + 
Sbjct: 812 VEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVR---PNAVVWR 868

Query: 155 ALIDGYLKHESFKEALNLKNRM----------TEVGVDL 183
            L+        + + + ++N++           EVG+D+
Sbjct: 869 TLLGACSLQGMWDKKMLVRNQIKQRRDPGCSSIEVGIDI 907



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 26/217 (11%)

Query: 42  TANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           + N +  T+++ AY     P++AL L  +M    ++  +VT  V +      G +     
Sbjct: 694 SKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEW 753

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT--------AY 153
               +   GL  ++ +  +LI+   K   I  AR     +P      D T        ++
Sbjct: 754 IHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPN-----DVTFMGVLMACSH 808

Query: 154 TALIDGYLKH-ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
             L++   +H  S KE  +L+ R++  G  +DL         L R G L EA     +M 
Sbjct: 809 AGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDL---------LCRAGLLTEAYEFILKMP 859

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            R   P+ ++  +LL     +G  D+ + ++N++  R
Sbjct: 860 VR---PNAVVWRTLLGACSLQGMWDKKMLVRNQIKQR 893


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  152 bits (385), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 141/283 (49%), Gaps = 35/283 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I   + +Y  +I GLC ES+  +++ +   M+ +G+  N     T+MD Y K     +
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L  EML   +   VVTF +LIDGLCK+  +  A  +   M  FG+ PN+ VY  LID
Sbjct: 282 ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 124 GLCKK-----------------------------------NCIERARNLFDEMPKRDMIP 148
           G CK                                    + +E A  L  EM K+  +P
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   Y  LIDGY K  + ++A+ + ++MTE G++ ++  +++L+ G  + G ++ A  L+
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM+ +G+LPD +   +L+  H++ GN  EA  L  EM   GL
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    ++  YGT+I G C +  F  +  L  EM E  +    VI T L+        
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESR 243

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA S+   M +S +   + T+  ++DG CK   V++A++ +  M   GL PNV  +  
Sbjct: 244 ISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGI 303

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK + +  AR    +M    ++P+   Y  LIDGY K  +  EAL+L + + +  
Sbjct: 304 LIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE 363

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y+ L+ GL     ++EA  L  EM  +G LP+ +   +L+  + + GNM++AI
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 241 ELQNEMMGRGL 251
           E+ ++M  +G+
Sbjct: 424 EVCSQMTEKGI 434



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 132/265 (49%), Gaps = 17/265 (6%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+  Y  +I GLC   + E++  LL EMK+ G   N V   TL+D Y K G   +A+
Sbjct: 364 ILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAI 423

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M +  IE  ++TF  LIDG CK+G +  A+  +  M   GL P+V  YTALIDG 
Sbjct: 424 EVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGH 483

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD--- 182
            K    + A  L  EM +  + P+    + LIDG  K     +A+ L   + + G D   
Sbjct: 484 FKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL--FLAKTGTDTTG 541

Query: 183 -----LDLN-------AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
                LD +        YT+L+ GL   G + +A   F +M   G+ PD   CI +++ H
Sbjct: 542 SKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGH 601

Query: 231 YERGNMDEAIELQNEMMGRGLLSGS 255
           +   ++ + + LQ +++  G++  S
Sbjct: 602 FRAMHLRDVMMLQADILKMGIIPNS 626



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 121/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  +  ++  +G +I GLC   +   ++  L +M   G+  N  +   L+D Y KAG 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEALSL  E+    I   V T+ +LI GLC    + EA      M   G  PN   Y  
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E+A  +  +M ++ + P+   ++ LIDGY K    + A+ L   M   G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ AYT+L+ G  + G+ +EA  L  EM   G+ P+      L+    + G + +AI
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528

Query: 241 EL 242
           +L
Sbjct: 529 KL 530



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 119/258 (46%), Gaps = 13/258 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K    +   Y T+I G C E   E +  + S+M E G+  N +  +TL+D Y KAG+
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  EM+   +   VV +  LIDG  K G  +EA      M + GLHPNV   + 
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSC 513

Query: 121 LIDGLCKKNCIERARNLF-------------DEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           LIDGLCK   I  A  LF             +E+ +    P+   YTALI G        
Sbjct: 514 LIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIF 573

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A    + M   G+  D+     ++ G  R  HL++  +L  +++  GI+P+  +   L 
Sbjct: 574 KASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLA 633

Query: 228 KKHYERGNMDEAIELQNE 245
           K + E G +  A+    E
Sbjct: 634 KGYEESGYLKSALSFCGE 651



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 97/199 (48%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  ++D   K G       +  +M+       VVT+  LIDG C+ G   +A   F  M 
Sbjct: 161 CNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI 220

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           +  + P V +YT LI GLC ++ I  A ++F  M    M+P+   Y  ++DGY K    K
Sbjct: 221 EKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVK 280

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +AL L   M   G+  ++  +  L+ GL +   +  AR    +M   G++P+  +   L+
Sbjct: 281 KALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLI 340

Query: 228 KKHYERGNMDEAIELQNEM 246
             + + GN+ EA+ L +E+
Sbjct: 341 DGYCKAGNLSEALSLHSEI 359



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 6/182 (3%)

Query: 74  SRIEVTVVT---FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           SR+E +  T   F VLI    + GLV EA+  + +M    + P +     ++DGL KK  
Sbjct: 117 SRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGR 173

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
            +    ++ +M  R   P+   Y  LIDG  +   F +A  L + M E  +   +  YT 
Sbjct: 174 FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTI 233

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ GL     + EA  +F  M   G+LP+     +++  + +  ++ +A+EL  EM+G G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDG 293

Query: 251 LL 252
           LL
Sbjct: 294 LL 295



 Score = 43.5 bits (101), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 23/152 (15%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D+  + ++I G  +  + E++  L +EMKE    A             + GE   +L 
Sbjct: 812 KKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARK---------NKRNGEXESSLV 862

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGL 125
           L ++          VTF  ++     +GLV E   +F  M  D+ L P ++ +  ++D L
Sbjct: 863 LPND----------VTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLL 912

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           C+   +  A     +MP R   P+   +  L+
Sbjct: 913 CRAGLLTEAYEFILKMPVR---PNAVVWRTLL 941



 Score = 40.4 bits (93), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 4/120 (3%)

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
            P++AL L  +M     +  +VT  V +      G +         +   GL  ++ +  
Sbjct: 729 RPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNN 788

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LI+   K   I  AR LFD   K+D+    T +T++I G+  H   +EAL L   M E 
Sbjct: 789 SLINMYSKCGEIGTARRLFDGTQKKDV----TTWTSMIVGHALHGQAEEALQLFTEMKET 844


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/246 (36%), Positives = 132/246 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K +L  Y TII  LC ++   D+  LLSEM + G+  + V  +T++  +   G 
Sbjct: 223 MEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGH 282

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L +EM+   +    VTF +L+DGLCK G+V EA   F  M   G  PN   Y A
Sbjct: 283 LNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNA 342

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C  N ++ A+ + D M  +   P   +Y  LI+GY K     EA +L   M+E  
Sbjct: 343 LMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE 402

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y++L+ GL + G  QEA  LF EM   G+LPD +   +LL    + G++DEA+
Sbjct: 403 LTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEAL 462

Query: 241 ELQNEM 246
           +L   M
Sbjct: 463 KLLKSM 468



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 126/246 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y T+I GLC       +  LL +M+E G   N V  TT++D+  K    ++A+ 
Sbjct: 194 QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMD 253

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL EM+D  I   VVT+  ++ G C  G + EA   F  M    + PN   +T L+DGLC
Sbjct: 254 LLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLC 313

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+  +  AR +F+ M K+   P+   Y AL+DGY  +    EA  + + M + G    ++
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVH 373

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +Y  L+ G  +   L EA+ L  EM  + + PD +   +L++   + G   EA+ L  EM
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEM 433

Query: 247 MGRGLL 252
              GLL
Sbjct: 434 CSSGLL 439



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 121/255 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+N+  +   +  ++ GLC E    +++ +   M + G   N      LMD Y    +
Sbjct: 293 MVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQ 352

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +LD M+D      V ++ +LI+G CK   + EA      M +  L P+   Y+ 
Sbjct: 353 MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYST 412

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+    + A NLF EM    ++PD   Y+ L+DG  KH    EAL L   M E  
Sbjct: 413 LMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESK 472

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  Y  L+ G+   G L+ A+ LF ++   GI P       ++K   + G  DEA 
Sbjct: 473 IEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAY 532

Query: 241 ELQNEMMGRGLLSGS 255
           EL  +M   G L  S
Sbjct: 533 ELFRKMEDDGFLPNS 547



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 123/246 (50%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N +  +  +G  +  +  + ++     L ++M   G+T N      L++   +      A
Sbjct: 87  NPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFA 146

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +S+L +M    I+   +TF  LI+G C  G ++EA+  F  M   G  P+V  Y+ +I+G
Sbjct: 147 ISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVING 206

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK      A  L  +M ++   P+  AYT +ID   K     +A++L + M + G+  D
Sbjct: 207 LCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPD 266

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y++++ G    GHL EA +LF+EM+GR ++P+ +    L+    + G + EA  +  
Sbjct: 267 VVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFE 326

Query: 245 EMMGRG 250
            M  +G
Sbjct: 327 AMTKKG 332



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 111/219 (50%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L +M + G+  + +   TL++     GE  EA+ L +EM+    +  V+++  +I+GLC
Sbjct: 149 VLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLC 208

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG    A+    +M + G  PN+  YT +ID LCK   +  A +L  EM  R + PD  
Sbjct: 209 KSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV 268

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ ++ G+       EA  L N M    V  +   +T LV GL + G + EAR +F  M
Sbjct: 269 TYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +G  P+     +L+  +     MDEA ++ + M+ +G
Sbjct: 329 TKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 121/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + +   Y  ++ G C+ ++ ++++ +L  M + G          L++ Y K   
Sbjct: 328 MTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRR 387

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SLL EM +  +    VT+  L+ GLC+ G  +EA++ F  M   GL P++  Y+ 
Sbjct: 388 LDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYST 447

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   ++ A  L   M +  + PD   Y  LI+G       + A  L +++   G
Sbjct: 448 LLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADG 507

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  YT ++ GL + G   EA  LF +M   G LP+      +++   +  +   AI
Sbjct: 508 IQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAI 567

Query: 241 ELQNEMMGR 249
            L +EM+G+
Sbjct: 568 RLIDEMVGK 576



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 104/207 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C   + +++K LL EM E  LT +TV  +TLM    + G P EAL+L  EM 
Sbjct: 375 YNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMC 434

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S +   ++T+  L+DGLCK G + EA+     M +  + P++ +Y  LI+G+     +E
Sbjct: 435 SSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLE 494

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ LF ++    + P    YT +I G LK     EA  L  +M + G   +  +Y  ++
Sbjct: 495 VAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVII 554

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
            G  +      A  L  EM+G+    D
Sbjct: 555 QGFLQNQDSSTAIRLIDEMVGKRFSAD 581



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 106/199 (53%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           K  + S  +SL ++M    +   V +  +LI+ LC+   V  AI   G+M   G+ P+  
Sbjct: 104 KKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAI 163

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +  LI+G C +  I+ A  LF+EM +R   PD  +Y+ +I+G  K  +   AL L  +M
Sbjct: 164 TFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM 223

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G   +L AYT+++  L +   + +A  L  EM+ RGI PD +   ++L      G++
Sbjct: 224 EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHL 283

Query: 237 DEAIELQNEMMGRGLLSGS 255
           +EA  L NEM+GR ++  +
Sbjct: 284 NEATILFNEMVGRNVMPNT 302



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 100/192 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y T++ GLC   + +++  L  EM  +GL  + +  +TL+D   K G 
Sbjct: 398 MSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGH 457

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL  M +S+IE  +V + +LI+G+  +G +  A + F ++   G+ P +  YT 
Sbjct: 458 LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTI 517

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GL K+   + A  LF +M     +P++ +Y  +I G+L+++    A+ L + M    
Sbjct: 518 MIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKR 577

Query: 181 VDLDLNAYTSLV 192
              D + +  L+
Sbjct: 578 FSADSSTFQMLL 589



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 75/150 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL  Y T++ GLC     +++  LL  M+E+ +  + V+   L++  F AG+   A  L 
Sbjct: 441 DLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELF 500

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            ++    I+ T+ T+ ++I GL K GL  EA + F +M D G  PN   Y  +I G  + 
Sbjct: 501 SKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQN 560

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID 158
                A  L DEM  +    D++ +  L+D
Sbjct: 561 QDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 91/189 (48%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL+    ML      +VV F   +  + K       +    +M  FG+  NV     LI
Sbjct: 75  DALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILI 134

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC+ N +  A ++  +M K  + PD   +  LI+G       KEA+ L N M   G  
Sbjct: 135 NCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQ 194

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ +Y++++ GL + G+   A  L  +M  +G  P+ +   +++    +   +++A++L
Sbjct: 195 PDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDL 254

Query: 243 QNEMMGRGL 251
            +EM+ RG+
Sbjct: 255 LSEMVDRGI 263



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 73/155 (47%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + +A+  F RM      P+V  +   +  + KK       +L ++M    +  +  +   
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI+   +      A+++  +M ++G+  D   + +L+ G    G ++EA  LF+EM+ RG
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             PD I   +++    + GN   A++L  +M  +G
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKG 227


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 136/248 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+  + ++  YGT+I GLC + +  ++  + SEM   G++ N V   +L+    K  E
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +L++EM+DS+I   V T   ++D LCK G+V EA D    M   G+ PNV  Y A
Sbjct: 201 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C +N ++ A  +FD M  +D + +  +Y  LI+GY K +S  +A+ L   M+   
Sbjct: 261 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 320

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +L+ GL   G LQ+A  LFHEM+ RG +PD +   +L     +  ++D+A+
Sbjct: 321 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 380

Query: 241 ELQNEMMG 248
            L   + G
Sbjct: 381 ALLKAIEG 388



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 126/246 (51%), Gaps = 13/246 (5%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + D+  YGT++ GLC             +M   G++ +     +L+ A     E     
Sbjct: 647 FQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNSLIHALCNLCEWKHVT 693

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +LL+EM++S+I   VV F  ++D LCK G++  A D    M   G+ P+V  YTAL+DG 
Sbjct: 694 TLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGH 753

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C ++ ++ A  +FD M  +  +P+  +Y  LI+GY + +   +A+ L  +M+  G+  D 
Sbjct: 754 CLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADT 813

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL   G LQ A  LFHEM+  G +PD +    LL    +  ++ EA+ L   
Sbjct: 814 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 873

Query: 246 MMGRGL 251
           + G  L
Sbjct: 874 IEGSNL 879



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 116/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+    T++  LC E    ++  ++  M   G+  N V    LMD +    E
Sbjct: 211 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ + D M+       V+++  LI+G CK   V +A+  F  M    L PN   Y  
Sbjct: 271 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 330

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    ++ A +LF EM  R  IPD   Y  L D   K+    +A+ L   +    
Sbjct: 331 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 390

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            D D+  YT+++ G+ R G L++AR LF  +  +G+ P+      ++    ++G + EA 
Sbjct: 391 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 450

Query: 241 ELQNEMMGRG 250
           +L +EM   G
Sbjct: 451 KLFSEMNKNG 460



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y ++I  LC   +++    LL+EM  + +  N V+ +T++DA  K G 
Sbjct: 664 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 723

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  ++D M+   +E  VVT+  L+DG C    + EA+  F  M   G  PNV  Y  
Sbjct: 724 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 783

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+   +++A  L ++M  + +I DT  Y  LI G       + A+ L + M   G
Sbjct: 784 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 843

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y  L+  L +  HL EA VL   + G  +  D ++    +      G ++ A 
Sbjct: 844 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAAR 903

Query: 241 ELQNEMMGRGL 251
           +L + +  +GL
Sbjct: 904 DLFSNLSSKGL 914



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++  Y  ++ G C+ ++ + +  +   M      AN +   TL++ Y K   
Sbjct: 246 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EM    +    VT+  LI GLC  G +++AI  F  M   G  P++  Y  
Sbjct: 306 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L D LCK   +++A  L   +   +  PD   YT ++DG  +    ++A +L + ++  G
Sbjct: 366 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 425

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD-EA 239
           +  ++  Y  ++ GL + G L EA  LF EM   G  P++    +L+ + + R N     
Sbjct: 426 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC-TYNLITRGFLRNNEALRT 484

Query: 240 IELQNEMMGRGL 251
           IEL  EM+ RG 
Sbjct: 485 IELLEEMLARGF 496



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+     +I  LC  ++ + +   L+++ + G   +    TTL+      G+
Sbjct: 71  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 130

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L D+M+    +  VVT+  LI+GLCK   V EA + F  M   G+ PN+  Y +
Sbjct: 131 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 190

Query: 121 LI-----------------------------------DGLCKKNCIERARNLFDEMPKRD 145
           LI                                   D LCK+  +  A ++ D M  R 
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+   Y AL+DG+        A+ + + M       ++ +Y +L+ G  +   + +A 
Sbjct: 251 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 310

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            LF EM  + + P+ +   +L+      G + +AI L +EM+ RG
Sbjct: 311 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 355



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 1/228 (0%)

Query: 23  ESKFEDSKLLLS-EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV 81
           ++K   + L LS +M   G+  +      ++++         A S L ++L    +    
Sbjct: 57  KTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDAT 116

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           TF  LI GLC  G + EA+  F +M   G  PNV  Y  LI+GLCK   +  A N+F EM
Sbjct: 117 TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEM 176

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
             + + P+   Y +LI G  K   +K    L N M +  +  D+    ++V  L + G +
Sbjct: 177 ITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMV 236

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            EA  +   MI RG+ P+ +   +L+  H  R  +D A+++ + M+ +
Sbjct: 237 AEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHK 284



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 96/205 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  +   Y T+I GLC   + +D+  L  EM   G   + V   TL D   K   
Sbjct: 316 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 375

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++LL  +  S  +  +  +  ++DG+C++G + +A D F  +   GL PNV  Y  
Sbjct: 376 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 435

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK+  +  A  LF EM K    P+   Y  +  G+L++      + L   M   G
Sbjct: 436 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 495

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEAR 205
             +D++  T LV  LS  G  Q  +
Sbjct: 496 FSVDVSTTTLLVGMLSDDGLDQSVK 520



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 98/219 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+  A++  Y T+I G C     + +  L  EM    LT NTV   TL+      G 
Sbjct: 281 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+SL  EM+       +VT+  L D LCK+  + +A+     +      P++ +YT 
Sbjct: 341 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG+C+   +E AR+LF  +  + + P+   Y  +I G  K     EA  L + M + G
Sbjct: 401 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 460

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              +   Y  +  G  R         L  EM+ RG   D
Sbjct: 461 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 499



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +TV    L+ +  K    S  LSL  +M    I   V T  ++I+ LC    V  A    
Sbjct: 44  STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 103

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            ++   G  P+   +T LI GLC +  I  A +LFD+M      P+   Y  LI+G  K 
Sbjct: 104 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKD 163

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               EA N+ + M   G+  ++  Y SL+ GL +    +    L +EM+   I+PD    
Sbjct: 164 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 223

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +++    + G + EA ++ + M+ RG+
Sbjct: 224 NTVVDALCKEGMVAEAHDVVDMMIHRGV 251



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 80/152 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + AD   Y T+I GLC   + + +  L  EM  +G   + V    L+D   K   
Sbjct: 804 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 863

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA+ LL  +  S ++  ++ + + IDG+C++G +  A D F  +   GL P+V  Y  
Sbjct: 864 LAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNI 923

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           +I GLCK+  ++ A  LF +M + D+  ++T+
Sbjct: 924 MIHGLCKRGLLDEANKLFRKMDENDIWSNSTS 955



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 13/214 (6%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +TV  T L+ +  K    S  LSL  +M    I   V T  +LI+  C    +  A    
Sbjct: 580 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 639

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            ++   G  P+V  Y  L++GLCK             M  + + PD   Y +LI      
Sbjct: 640 AKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCNL 686

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
             +K    L N M    +  ++  ++++V  L + G +  A  +   MI RG+ PD +  
Sbjct: 687 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 746

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
            +L+  H  R  MDEA+++ + M+ +G +   ++
Sbjct: 747 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 89/190 (46%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EALS  + ML  +   + V F  L+  + K+      +    +M  FG+ P+V     +I
Sbjct: 28  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 87

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC  N ++ A +   ++ K    PD T +T LI G        EAL+L ++M   G  
Sbjct: 88  NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 147

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL +   + EA  +F EMI +GI P+ +   SL+    +         L
Sbjct: 148 PNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTL 207

Query: 243 QNEMMGRGLL 252
            NEM+   ++
Sbjct: 208 MNEMVDSKIM 217



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 48/254 (18%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++M   G+  +      L++++        A S+L ++L    +  VVT+  L++GLC
Sbjct: 603 LSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC 662

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALI----------------------------- 122
           K             M   G+ P++  Y +LI                             
Sbjct: 663 K-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVV 709

Query: 123 ------DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
                 D LCK+  I  A ++ D M KR + PD   YTAL+DG+       EA+ + + M
Sbjct: 710 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 769

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              G   ++ +Y  L+ G  +   + +A  L  +M  +G++ D +   +L+      G +
Sbjct: 770 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 829

Query: 237 DEAIELQNEMMGRG 250
             AI L +EM+  G
Sbjct: 830 QHAIALFHEMVASG 843



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/123 (21%), Positives = 52/123 (42%)

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A + F+ M  +   P T  +  L+    K +     L+L  +M   G+  D+   
Sbjct: 24  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 83

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             ++  L     +  A     +++  G  PD     +L++     G + EA+ L ++M+G
Sbjct: 84  AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 143

Query: 249 RGL 251
            G 
Sbjct: 144 EGF 146


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 130/246 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K D+  Y T+I  LC + +  ++    SEM + G+  N V  ++++  +   G+
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA SL  +M+   +    VTF +L+DGLCK G++ EA   F  M + G+ P+   Y+A
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSA 321

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A+ LFD M  +   P    Y  LI+G+ K     EA  L + M +  
Sbjct: 322 LMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRD 381

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y++L+ G  + G  Q A+ LF EM   G+LPD I    LL    + G++DEA 
Sbjct: 382 LTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAF 441

Query: 241 ELQNEM 246
            L   M
Sbjct: 442 RLLKAM 447



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 127/239 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +GT++ GLC ++K  D+  L  E+ + G   + +  TT++    K G  + AL LL +M 
Sbjct: 144 FGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKME 203

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +  VV +  +ID LCK     EA+ +F  M D G+ PNV  Y++++ G C    + 
Sbjct: 204 EKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLN 263

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +LF +M  R+++P+T  +T L+DG  K     EA  +   MTE GV+ D   Y++L+
Sbjct: 264 EATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALM 323

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G      + EA+ LF  M+G+G  P   +   L+  H +   ++EA  L +EM  R L
Sbjct: 324 DGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL 382



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 119/243 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII GLC      ++  LL +M+E G   + V   T++D+  K    +EA+    EM+
Sbjct: 179 YTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMV 238

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I   VVT+  ++ G C  G + EA   F +M    + PN   +T L+DGLCK+  I 
Sbjct: 239 DQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMIL 298

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR +F+ M +  + PD   Y+AL+DGY       EA  L + M   G    +  Y  L+
Sbjct: 299 EARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILI 358

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   L EA+ L  EM  R + PD +   +L++   + G    A +L  EM   GLL
Sbjct: 359 NGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLL 418

Query: 253 SGS 255
             S
Sbjct: 419 PDS 421



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 122/255 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+N+  +   +  ++ GLC E    +++ +   M ENG+  +    + LMD Y    +
Sbjct: 272 MIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQ 331

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D M+      +V  + +LI+G CKS  + EA      M D  L P+   Y+ 
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYST 391

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+    + A+ LF EM    ++PD+  Y+ L+DG  KH    EA  L   M E  
Sbjct: 392 LMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESK 451

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++  +  Y  L+ G+   G L+ AR LF  +  +GI P  +    ++    + G  +EA 
Sbjct: 452 IEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEAC 511

Query: 241 ELQNEMMGRGLLSGS 255
           E+  +M+  G L  S
Sbjct: 512 EMFRKMVVNGCLPNS 526



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 105/220 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK     + +Y  +I G C   +  ++K LLSEM +  LT +TV  +TLM  + +AG 
Sbjct: 342 MVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P  A  L  EM    +    +T+ +L+DGLCK G + EA      M +  + P++ +Y  
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNI 461

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G+C    +E AR LF  +  + + P    YT +I G LK     EA  +  +M   G
Sbjct: 462 LIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNG 521

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
              +   Y   + G  R G    A  L  EM+GRG   D 
Sbjct: 522 CLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADS 561



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 120/255 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D   Y  ++ G C++S+ ++++ L   M   G   +  +   L++ + K+  
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA +LL EM D  +    VT+  L+ G C++G  + A   F  M  +GL P+   Y+ 
Sbjct: 367 LNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSI 426

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   ++ A  L   M +  + P    Y  LI G       + A  L + +   G
Sbjct: 427 LLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG 486

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  YT ++ GL + G   EA  +F +M+  G LP+       ++     G+   A+
Sbjct: 487 IQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAV 546

Query: 241 ELQNEMMGRGLLSGS 255
            L  EM+GRG  + S
Sbjct: 547 RLIEEMVGRGFSADS 561



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 99/212 (46%), Gaps = 2/212 (0%)

Query: 46  VICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL--VREAIDYF 103
           V+   L+ +  K    S  +SL  +M  S I   V T  +LI+ LC S    V  A    
Sbjct: 70  VVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSAL 129

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
           G+M   GL P    +  L++GLC K  I  A  LFDE+ K    P    YT +I G  K 
Sbjct: 130 GKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKI 189

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
                AL L  +M E G   D+ AY +++  L +     EA   F EM+ +GI P+ +  
Sbjct: 190 GHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTY 249

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            S+L      G ++EA  L  +M+GR ++  +
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGRNVMPNT 281



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 106/219 (48%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           L +M + GL    V   TL++      +  +A+ L DE+       +++T+  +I GLCK
Sbjct: 129 LGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCK 188

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
            G    A+    +M + G  P+V  Y  +ID LCK      A   F EM  + + P+   
Sbjct: 189 IGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVT 248

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y++++ G+       EA +L  +M    V  +   +T LV GL + G + EAR +F  M 
Sbjct: 249 YSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMT 308

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             G+ PD     +L+  +  +  MDEA +L + M+G+G 
Sbjct: 309 ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGF 347



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 92/188 (48%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S L +M    ++ T VTF  L++GLC    + +A+  F  +   G  P++  YT +I 
Sbjct: 125 AFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIK 184

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK      A  L  +M ++   PD  AY  +ID   K     EA+   + M + G+  
Sbjct: 185 GLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPP 244

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y+S++ G    G L EA  LF +MIGR ++P+ +    L+    + G + EA  + 
Sbjct: 245 NVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF 304

Query: 244 NEMMGRGL 251
             M   G+
Sbjct: 305 EMMTENGV 312



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 78/193 (40%), Gaps = 35/193 (18%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +++  D   Y T++ G C   + + ++ L  EM   GL  +++  + L+D   K G 
Sbjct: 377 MYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGH 436

Query: 61  PSEALSLLDEMLDSRIEV-----------------------------------TVVTFCV 85
             EA  LL  M +S+IE                                    +VVT+ V
Sbjct: 437 LDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTV 496

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I GL K GL  EA + F +M   G  PN   Y   I G  +      A  L +EM  R 
Sbjct: 497 MISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRG 556

Query: 146 MIPDTTAYTALID 158
              D++ +  L+D
Sbjct: 557 FSADSSTFQMLLD 569


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 127/249 (51%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K I  ++  Y  II G C +     +  +  EM +NG T N V  T LMD YFK G+  
Sbjct: 277 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 336

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A S+   M D+ I  T  T  ++I GLCK+G   E  D F +    G  P    Y  +I
Sbjct: 337 NAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTII 396

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG  K+  I  A N++ EM +  + P T  YT+LIDG+ K  +   AL L N M   G+ 
Sbjct: 397 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 456

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           +D+ AY +L+ G  +   ++ A  L +E+ G G+ P+  +  S++       N++EAI+L
Sbjct: 457 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 516

Query: 243 QNEMMGRGL 251
             +M+  G+
Sbjct: 517 YKKMVNEGI 525



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 125/240 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII G   E     +  +  EM E G+T +TV  T+L+D + K      AL LL++M 
Sbjct: 392 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 451

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +++ +  +  LIDG CK   ++ A +    +   GL PN  +Y ++I G    N +E
Sbjct: 452 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 511

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L+ +M    +  D   YT+LIDG LK      A ++   M   G+  D  A+T L+
Sbjct: 512 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLI 571

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL   G  + AR +  +M G+ ++P  ++  +L+  H++ GN+ EA  L +EM+ RGL+
Sbjct: 572 NGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 631



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 1/250 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K + ++ D   Y   +  LC++     +  LL EM+  G        T+++ A  K G  
Sbjct: 67  KARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNV 126

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +EAL L D+M++    + +     L+ G C  G +R A+     + + GL PN   Y+ L
Sbjct: 127 AEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVL 186

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           IDG CK   IE+A   + EM  + +     +  ++++GYLK +S++ A  + N   E G+
Sbjct: 187 IDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL 246

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
                  T L W L + G + EA  L+ E+I +GI P+ +   +++  H  + N++ A +
Sbjct: 247 ANVFTFNTLLSW-LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACK 305

Query: 242 LQNEMMGRGL 251
           +  EM+  G 
Sbjct: 306 VYKEMLDNGF 315



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 101/194 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +K D+  YGT+I G C     + +  LL+E++  GL+ N  I  +++  +     
Sbjct: 450 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 509

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  +M++  I   + T+  LIDGL KSG +  A D    M   G+ P+   +T 
Sbjct: 510 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTV 569

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC K   E AR + ++M  ++MIP    Y  LI G+ K  + +EA  L + M + G
Sbjct: 570 LINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRG 629

Query: 181 VDLDLNAYTSLVWG 194
           +  D   Y  LV G
Sbjct: 630 LVPDNITYDILVNG 643



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 117/244 (47%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A++  + T++  LC E K  ++  L  E+   G++ N V    ++  + +    + A  +
Sbjct: 247 ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKV 306

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             EMLD+      VTF +L+DG  K G +  A   F RM D  + P       +I GLCK
Sbjct: 307 YKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCK 366

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
                  R+LF++   +  +P    Y  +IDG++K  +   A N+   M EVG+      
Sbjct: 367 AGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVT 426

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YTSL+ G  +  ++  A  L ++M  +G+  D     +L+    +R +M  A EL NE+ 
Sbjct: 427 YTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELR 486

Query: 248 GRGL 251
           G GL
Sbjct: 487 GAGL 490



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 1/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L +  +++ G C++     + +L++E+ E+GL  N V  + L+D   K G   +A    
Sbjct: 144 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFY 203

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM    I  +V +   +++G  K    + A   F    + GL  NV  +  L+  LCK+
Sbjct: 204 SEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKE 262

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A NL+DE+  + + P+  +Y  +I G+ + ++   A  +   M + G   +   +
Sbjct: 263 GKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTF 322

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T L+ G  + G ++ A  +FH M    ILP +     ++K   + G   E  +L N+ + 
Sbjct: 323 TILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVS 382

Query: 249 RGLL 252
           +G +
Sbjct: 383 QGFV 386



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 98/203 (48%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+ A  +     EA  L ++ML   +     T  V++    K G + EA  +F +    G
Sbjct: 11  LLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARG 70

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           +  +   Y+  +  LC K     A +L  EM     IP    +T++I   +K  +  EAL
Sbjct: 71  VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 130

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            LK+ M   G  ++L   TSL+ G    G+L+ A VL +E+   G++P+++    L+   
Sbjct: 131 RLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGC 190

Query: 231 YERGNMDEAIELQNEMMGRGLLS 253
            + GN+++A E  +EM  +G+ S
Sbjct: 191 CKNGNIEKAFEFYSEMKTKGIRS 213



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/212 (21%), Positives = 89/212 (41%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G+T +      ++ A  K G   EA     +     +E+    + + +  LC       A
Sbjct: 35  GVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYA 94

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +     M   G  P    +T++I    K+  +  A  L D+M       +    T+L+ G
Sbjct: 95  LSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKG 154

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           Y    + + AL L N ++E G+  +   Y+ L+ G  + G++++A   + EM  +GI   
Sbjct: 155 YCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSS 214

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                S+L+ + +  +   A  + N+ +  GL
Sbjct: 215 VYSLNSILEGYLKCQSWQNAFTMFNDALESGL 246


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 127/249 (51%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K I  ++  Y  II G C +     +  +  EM +NG T N V  T LMD YFK G+  
Sbjct: 395 AKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIE 454

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A S+   M D+ I  T  T  ++I GLCK+G   E  D F +    G  P    Y  +I
Sbjct: 455 NAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTII 514

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG  K+  I  A N++ EM +  + P T  YT+LIDG+ K  +   AL L N M   G+ 
Sbjct: 515 DGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLK 574

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           +D+ AY +L+ G  +   ++ A  L +E+ G G+ P+  +  S++       N++EAI+L
Sbjct: 575 MDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 634

Query: 243 QNEMMGRGL 251
             +M+  G+
Sbjct: 635 YKKMVNEGI 643



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 125/240 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII G   E     +  +  EM E G+T +TV  T+L+D + K      AL LL++M 
Sbjct: 510 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 569

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +++ +  +  LIDG CK   ++ A +    +   GL PN  +Y ++I G    N +E
Sbjct: 570 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 629

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L+ +M    +  D   YT+LIDG LK      A ++   M   G+  D  A+T L+
Sbjct: 630 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLI 689

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL   G  + AR +  +M G+ ++P  ++  +L+  H++ GN+ EA  L +EM+ RGL+
Sbjct: 690 NGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 749



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 1/250 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K + ++ D   Y   +  LC++     +  LL EM+  G        T+++ A  K G  
Sbjct: 185 KARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNV 244

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +EAL L D+M++    + +     L+ G C  G +R A+     + + GL PN   Y+ L
Sbjct: 245 AEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVL 304

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           IDG CK   IE+A   + EM  + +     +  ++++GYLK +S++ A  + N   E G+
Sbjct: 305 IDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL 364

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
                  T L W L + G + EA  L+ E+I +GI P+ +   +++  H  + N++ A +
Sbjct: 365 ANVFTFNTLLSW-LCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACK 423

Query: 242 LQNEMMGRGL 251
           +  EM+  G 
Sbjct: 424 VYKEMLDNGF 433



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 117/244 (47%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A++  + T++  LC E K  ++  L  E+   G++ N V    ++  + +    + A  +
Sbjct: 365 ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKV 424

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             EMLD+      VTF +L+DG  K G +  A   F RM D  + P       +I GLCK
Sbjct: 425 YKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCK 484

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
                  R+LF++   +  +P    Y  +IDG++K  +   A N+   M EVG+      
Sbjct: 485 AGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVT 544

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YTSL+ G  +  ++  A  L ++M  +G+  D     +L+    +R +M  A EL NE+ 
Sbjct: 545 YTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELR 604

Query: 248 GRGL 251
           G GL
Sbjct: 605 GAGL 608



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/194 (34%), Positives = 101/194 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +K D+  YGT+I G C     + +  LL+E++  GL+ N  I  +++  +     
Sbjct: 568 MKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNN 627

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  +M++  I   + T+  LIDGL KSG +  A D    M   G+ P+   +T 
Sbjct: 628 VEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTV 687

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC K   E AR + ++M  ++MIP    Y  LI G+ K  + +EA  L + M + G
Sbjct: 688 LINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRG 747

Query: 181 VDLDLNAYTSLVWG 194
           +  D   Y  LV G
Sbjct: 748 LVPDNITYDILVNG 761



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 116/244 (47%), Gaps = 1/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L +  +++ G C++     + +L++E+ E+GL  N V  + L+D   K G   +A    
Sbjct: 262 NLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFY 321

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM    I  +V +   +++G  K    + A   F    + GL  NV  +  L+  LCK+
Sbjct: 322 SEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKE 380

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A NL+DE+  + + P+  +Y  +I G+ + ++   A  +   M + G   +   +
Sbjct: 381 GKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTF 440

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T L+ G  + G ++ A  +FH M    ILP +     ++K   + G   E  +L N+ + 
Sbjct: 441 TILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVS 500

Query: 249 RGLL 252
           +G +
Sbjct: 501 QGFV 504



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 82/162 (50%)

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G + EA  +F +    G+  +   Y+  +  LC K     A +L  EM     IP   
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +T++I   +K  +  EAL LK+ M   G  ++L   TSL+ G    G+L+ A VL +E+
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
              G++P+++    L+    + GN+++A E  +EM  +G+ S
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRS 331


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 127/256 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  DL  + T+I G CIE K + +  L   M    L  + V   TL+D   + G+
Sbjct: 77  MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 136

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L D+M    I    VT+ +LID  C+ G V +A  +   M + G+ PN+  Y +
Sbjct: 137 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 196

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   + + +    +M    + PD   Y  LI GY+K +   +A  L N M +  
Sbjct: 197 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 256

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y  L+ G S  G++QEA  +F +M  +GI PD    +S++  H   GN  EA 
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 316

Query: 241 ELQNEMMGRGLLSGSK 256
           +L +EM+ RG     K
Sbjct: 317 QLHDEMLQRGFAPDDK 332



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 121/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D  +Y  +I G C      D+  +  EM   G   + V   TL++   K   
Sbjct: 7   MRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERR 66

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL+EM +  +   + TF  LI G C  G + +A+  F  M +  L P++  Y  
Sbjct: 67  LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 126

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG+C++  +++A +L+D+M  R++ P+   Y+ LID + +    ++A    + M   G
Sbjct: 127 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 186

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y S++ G  R G++ + +    +M+   + PD I   +L+  + +   M +A 
Sbjct: 187 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAF 246

Query: 241 ELQNEM 246
           +L N M
Sbjct: 247 KLLNMM 252



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 111/215 (51%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           L EM+  GL  + VI T ++  + +AG  S+AL + DEM+       VVT+  L++GLCK
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
              + +A      M + G+ P++  +T LI G C +  +++A  LFD M  + + PD   
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y  LIDG  +     +A +L + M    +  +   Y+ L+      G +++A     EMI
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            +GILP+ +   S++K +   GN+ +  +   +MM
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 218



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 93/172 (54%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           V + ++I G C++GL+ +A+     M   G  P+V  Y  L++GLCK+  +  A  L +E
Sbjct: 17  VIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNE 76

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M +R + PD   +T LI GY       +AL L + M    +  D+  Y +L+ G+ R G 
Sbjct: 77  MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 136

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           L +A  L+ +M  R I P+ +    L+  H E+G +++A    +EM+ +G+L
Sbjct: 137 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGIL 188



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 75/148 (50%)

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
           Y   M  FGL P+  +YT +I G C+   +  A  + DEM     +PD   Y  L++G  
Sbjct: 3   YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           K     +A  L N M E GV  DL  +T+L+ G    G L +A  LF  M+ + + PD +
Sbjct: 63  KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGR 249
              +L+     +G++D+A +L ++M  R
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSR 150



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 59/112 (52%)

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM    ++PD   YT +I G+ +     +AL +++ M   G   D+  Y +L+ GL +  
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L +A  L +EM  RG+ PD     +L+  +   G +D+A++L + M+ + L
Sbjct: 66  RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 117


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 134/249 (53%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  ++ ++ +Y TII G+C +    D+  L SEM   G++ N V  + L+  +F  G+  
Sbjct: 190 GNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLK 249

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L ++M+   I+  V TF +L+DG CK G ++E    F  M   G+ PNV  Y +L+
Sbjct: 250 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 309

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C    + +A+++   M +R + PD  +Y  LIDG+ K +   EA+NL   M    + 
Sbjct: 310 DGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHII 369

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y SL+ GL + G +  A  L  EM  RG+ PD I   S+L    +   +D+AI L
Sbjct: 370 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 429

Query: 243 QNEMMGRGL 251
             ++  +G+
Sbjct: 430 LTKLKDQGI 438



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 128/243 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +NIK D+  +  ++ G C + K ++ K + + M + G+  N V   +LMD Y    E ++
Sbjct: 261 ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNK 320

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+L  M    +   + ++ +LIDG CK   V EA++ F  M    + P+V  Y +LID
Sbjct: 321 AKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLID 380

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   I  A  L DEM  R + PD   Y++++D   K+    +A+ L  ++ + G+  
Sbjct: 381 GLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRP 440

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  YT L+ GL + G L++A  +F +++ +G          ++     +G  DEA+ L 
Sbjct: 441 NMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALL 500

Query: 244 NEM 246
           ++M
Sbjct: 501 SKM 503



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 132/252 (52%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK ++  Y +++ G C+  +   +K +L  M + G+  +      L+D + K  +
Sbjct: 293 MMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKK 352

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L  EM    I   VVT+  LIDGLCK G +  A+     M D G+ P++  Y++
Sbjct: 353 VDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSS 412

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D LCK + +++A  L  ++  + + P+   YT LIDG  K    ++A N+   +   G
Sbjct: 413 ILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 472

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            ++ +N YT ++ G    G   EA  L  +M     +PD +    +++  +++   D+A 
Sbjct: 473 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAE 532

Query: 241 ELQNEMMGRGLL 252
           +L+ EM+ RGLL
Sbjct: 533 KLR-EMITRGLL 543



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GLC++ +   + L    +   G   + V   TL+    K GE   AL LL  + 
Sbjct: 130 FTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVD 189

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI---------- 122
            + ++  VV +  +IDG+CK   V +A D +  M   G+ PNV  Y+ALI          
Sbjct: 190 GNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLK 249

Query: 123 -------------------------DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                    DG CK   ++  + +F  M K+ + P+   Y +L+
Sbjct: 250 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 309

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DGY   +   +A ++   M++ GV+ D+ +Y  L+ G  +   + EA  LF EM  + I+
Sbjct: 310 DGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHII 369

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           PD +   SL+    + G +  A++L +EM  RG+
Sbjct: 370 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 403



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 110/212 (51%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   NT+  TTL+      G+  +AL   D ++    ++  V +  LI GLCK G  R A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +D   R+    + PNV +Y+ +IDG+CK   +  A +L+ EM  + + P+   Y+ALI G
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +      K+A++L N+M    +  D+  +  LV G  + G ++E + +F  M+ +GI P+
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   SL+  +     +++A  +   M  RG+
Sbjct: 302 VVTYCSLMDGYCLVKEVNKAKSILYTMSQRGV 333


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 127/256 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  DL  + T+I G CIE K + +  L   M    L  + V   TL+D   + G+
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L D+M    I    VT+ +LID  C+ G V +A  +   M + G+ PN+  Y +
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   + + +    +M    + PD   Y  LI GY+K +   +A  L N M +  
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y  L+ G S  G++QEA  +F +M  +GI PD    +S++  H   GN  EA 
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 631

Query: 241 ELQNEMMGRGLLSGSK 256
           +L +EM+ RG     K
Sbjct: 632 QLHDEMLQRGFAPDDK 647



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 125/236 (52%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++   C   +F+    ++SEM++  +  + V    ++DA F+AG+   A++L+D M+   
Sbjct: 162 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 221

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++  +VT+  ++ GLC+SG+  +A + F  M DFG+ P+V  +T LI G C+   IE A 
Sbjct: 222 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 281

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            ++ EM  R + PD  +++ LI  + +      A+     M   G+  D   YT ++ G 
Sbjct: 282 KIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGF 341

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            R G + +A  +  EM+G G LPD +   +LL    +   + +A  L NEM  RG+
Sbjct: 342 CRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 127/247 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  +  +I G C   + E++  +  EM+  G+  + V  + L+  + + G+   A+
Sbjct: 257 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 316

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           + L EM    +    V + ++I G C++GL+ +A+     M   G  P+V  Y  L++GL
Sbjct: 317 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 376

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  +  A  L +EM +R + PD   +T LI GY       +AL L + M    +  D+
Sbjct: 377 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 436

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ G+ R G L +A  L+ +M  R I P+ +    L+  H E+G +++A    +E
Sbjct: 437 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 496

Query: 246 MMGRGLL 252
           M+ +G+L
Sbjct: 497 MINKGIL 503



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 124/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K  +  Y +++ GLC    ++ +  +  EM + G+  +    T L+  + + GE
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 276

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL +  EM    I+  +V+F  LI    + G +  A+ Y   M  FGL P+  +YT 
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   +  A  + DEM     +PD   Y  L++G  K     +A  L N M E G
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 396

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  DL  +T+L+ G    G L +A  LF  M+ + + PD +   +L+     +G++D+A 
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 456

Query: 241 ELQNEMMGRGLL 252
           +L ++M  R + 
Sbjct: 457 DLWDDMHSREIF 468



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 117/235 (49%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C      D+  +  EM   G   + V   TL++   K     +A  LL+EM
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +  +   + TF  LI G C  G + +A+  F  M +  L P++  Y  LIDG+C++  +
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 452

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           ++A +L+D+M  R++ P+   Y+ LID + +    ++A    + M   G+  ++  Y S+
Sbjct: 453 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 512

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           + G  R G++ + +    +M+   + PD I   +L+  + +   M +A +L N M
Sbjct: 513 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 567



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 124/247 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + IK DL  +  +I       K + +   L EM+  GL  + VI T ++  + +AG 
Sbjct: 287 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 346

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+AL + DEM+       VVT+  L++GLCK   + +A      M + G+ P++  +T 
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 406

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C +  +++A  LFD M  + + PD   Y  LIDG  +     +A +L + M    
Sbjct: 407 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 466

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y+ L+      G +++A     EMI +GILP+ +   S++K +   GN+ +  
Sbjct: 467 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 526

Query: 241 ELQNEMM 247
           +   +MM
Sbjct: 527 KFLQKMM 533



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 103/210 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
            NT     ++  Y KA E  +  +++ EM    +   VVT  V++D   ++G    A+  
Sbjct: 154 VNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMAL 213

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
              M   GL P +  Y +++ GLC+    ++A  +F EM    + PD  ++T LI G+ +
Sbjct: 214 VDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCR 273

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               +EAL +   M   G+  DL +++ L+   +R G +  A     EM   G++PD ++
Sbjct: 274 VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVI 333

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              ++      G M +A+ +++EM+G G L
Sbjct: 334 YTMVIGGFCRAGLMSDALRVRDEMVGCGCL 363



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 4/222 (1%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           ++S +  +  T    +   L+  Y ++ +P EA      +LD R+ +       L+  L 
Sbjct: 73  IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALS 132

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYT--ALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           ++G    A D +  +  F  +  V  YT   ++   CK    ++   +  EM KR + PD
Sbjct: 133 RAGWPHLAADAYRLV--FSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 190

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              +  ++D   +    + A+ L + M   G+   +  Y S++ GL R G   +A  +F 
Sbjct: 191 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 250

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           EM   G+ PD      L+      G ++EA+++  EM  RG+
Sbjct: 251 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGI 292


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 129/244 (52%), Gaps = 1/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+      I GL    + +++  + SE+KE GL  +    ++L+  + K GE  +A  L 
Sbjct: 324 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 383

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM    I   +  +  L+DGLCKSG ++ A   F  MP+ GL P+   Y+ +IDG CK 
Sbjct: 384 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 443

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A +LF EMP + + P +  Y AL+ G  K    ++A+NL   M + G    L ++
Sbjct: 444 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SF 502

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G  +   +QEA  LF EMI + I+PD +   +++  H + G M+EA  L  EM  
Sbjct: 503 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 562

Query: 249 RGLL 252
           R L+
Sbjct: 563 RNLI 566



 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 136/253 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++G+ +K D   +G  I G     K  ++     EM ++GL  N  + T L++ +FKAG 
Sbjct: 246 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EALS+   +    +   V T    I GL K+G V+EA+  F  + + GL P+V  Y++
Sbjct: 306 LMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+  +E+A  L DEM  + + P+   Y AL+DG  K    + A  L + M E G
Sbjct: 366 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 425

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y++++ G  +  ++ EA  LFHEM  +G+ P   +  +L+    + G+M++A+
Sbjct: 426 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 485

Query: 241 ELQNEMMGRGLLS 253
            L  EM+ +G  +
Sbjct: 486 NLFREMLQKGFAT 498



 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 133/255 (52%), Gaps = 8/255 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  +   Y  I  GLC   +  ++KL   EM++ GL  +   C+ L+D + + G+
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E L + D M+   I + ++T+ VLI GLCK G + +A +    M   G  PN   +  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+++ + RA  L DEM KR+++P   +Y A+I+G    +    A  L  +MT  G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC----ISLLKKHYERGNM 236
           +  ++  Y++L+ G +  G ++EAR L   M   G+ PD I C    IS L K    G M
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPD-IFCYNAIISCLSK---AGKM 236

Query: 237 DEAIELQNEMMGRGL 251
           +EA     E+ GRGL
Sbjct: 237 EEASTYLLEIQGRGL 251



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y  II  L    K E++   L E++  GL  + V     +  Y K G+
Sbjct: 211 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA    DEMLD  +      + VLI+G  K+G + EA+  F  +   G+ P+V   +A
Sbjct: 271 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 330

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I GL K   ++ A  +F E+ ++ ++PD   Y++LI G+ K    ++A  L + M   G
Sbjct: 331 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 390

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +LV GL + G +Q AR LF  M  +G+ PD +   +++  + +  N+ EA 
Sbjct: 391 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 450

Query: 241 ELQNEMMGRGL 251
            L +EM  +G+
Sbjct: 451 SLFHEMPSKGV 461



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N+      YG +I GLC       +  LL +M  +GL  N V+ +TL+  Y   G 
Sbjct: 141 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LLD M  S +   +  +  +I  L K+G + EA  Y   +   GL P+   + A
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  K   +  A   FDEM    ++P+   YT LI+G+ K  +  EAL++   +  +G
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+   ++ + GL + G +QEA  +F E+  +G++PD     SL+    ++G +++A 
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 380

Query: 241 ELQNEMMGRGL 251
           EL +EM  +G+
Sbjct: 381 ELHDEMCLKGI 391



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 124/250 (49%), Gaps = 19/250 (7%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  ++ +Y  ++ GLC     + ++ L   M E GL  ++V  +T++D Y K+   +E
Sbjct: 389 KGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAE 448

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A SL  EM    ++     +  L+ G CK G + +A++ F  M   G    ++ +  LID
Sbjct: 449 AFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLID 507

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   I+ A  LF EM  + ++PD   YT +ID + K    +EA  L   M E  + +
Sbjct: 508 GYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIV 567

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D                      LF +M+ +G+ PDE+    ++  H +  N+ EA +L+
Sbjct: 568 D------------------TVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLR 609

Query: 244 NEMMGRGLLS 253
           +E++G+G+L+
Sbjct: 610 DEVVGKGMLT 619



 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 115/247 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  +L  Y  +I GLC   K E +  +L  M   G   N+     L++ Y +      AL
Sbjct: 76  IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 135

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LLDEM    +  + V++  +I+GLC    +  A     +M   GL PNV VY+ LI G 
Sbjct: 136 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 195

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
             +  IE AR L D M    + PD   Y A+I    K    +EA      +   G+  D 
Sbjct: 196 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 255

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             + + + G S+ G + EA   F EM+  G++P+  L   L+  H++ GN+ EA+ +   
Sbjct: 256 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 315

Query: 246 MMGRGLL 252
           +   G+L
Sbjct: 316 LHALGVL 322



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 18/269 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y T+I G C      ++  L  EM   G+  ++ +   L+    K G+
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 480

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L  EML      T ++F  LIDG CKS  ++EA   F  M    + P+   YT 
Sbjct: 481 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-----------------PDTTAYTALIDGYLKH 163
           +ID  CK   +E A  LF EM +R++I                 PD   Y  +I  + K 
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 599

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
           ++  EA  L++ +   G+      +  L+  L +   L EA  L  EM   G+ P    C
Sbjct: 600 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 659

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +L++  +E G MDEA  +   +   GL+
Sbjct: 660 STLVRSFHEAGKMDEATRVFEGVKSLGLV 688



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 18/264 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++    +Y  ++ G C E   E +  L  EM + G  A T+   TL+D Y K+ +
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCK 514

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA-----------------IDYF 103
             EA  L  EM+  +I    VT+  +ID  CK+G + EA                    F
Sbjct: 515 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALF 574

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            +M   G+ P+   Y  +I   CK++ +  A  L DE+  + M+   T +  LI    K 
Sbjct: 575 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKR 634

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
           E   EA  L + M E+G+   L A ++LV      G + EA  +F  +   G++PD    
Sbjct: 635 EDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL 694

Query: 224 ISLLKKHYERGNMDEAIELQNEMM 247
           I L+  +    + ++A  L  +++
Sbjct: 695 IDLVNGNLNDTDSEDARNLIKQLV 718



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 79/150 (52%)

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M + GL PN   YT +  GLC+   +  A+  F+EM K  + PD  A +ALIDG+++   
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             E L +K+ M   G+ ++L  Y  L+ GL + G +++A  +   MI  G  P+      
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           L++ +    NM  A+EL +EM  R L+  +
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSA 150


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 129/244 (52%), Gaps = 1/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+      I GL    + +++  + SE+KE GL  +    ++L+  + K GE  +A  L 
Sbjct: 523 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 582

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM    I   +  +  L+DGLCKSG ++ A   F  MP+ GL P+   Y+ +IDG CK 
Sbjct: 583 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 642

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A +LF EMP + + P +  Y AL+ G  K    ++A+NL   M + G    L ++
Sbjct: 643 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SF 701

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G  +   +QEA  LF EMI + I+PD +   +++  H + G M+EA  L  EM  
Sbjct: 702 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 761

Query: 249 RGLL 252
           R L+
Sbjct: 762 RNLI 765



 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 140/287 (48%), Gaps = 34/287 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K +  D+  Y ++I G C + + E +  L  EM   G+  N  I   L+D   K+G+
Sbjct: 550 LKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 609

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L D M +  +E   VT+  +IDG CKS  V EA   F  MP  G+ P+  VY A
Sbjct: 610 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 669

Query: 121 LIDGLCK---------------------------------KNC-IERARNLFDEMPKRDM 146
           L+ G CK                                 K+C I+ A  LF EM  + +
Sbjct: 670 LVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 729

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           +PD   YT +ID + K    +EA  L   M E  + +D   YTSL++G ++ G   E   
Sbjct: 730 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFA 789

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           LF +M+ +G+ PDE+    ++  H +  N+ EA +L++E++G+G+L+
Sbjct: 790 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLT 836



 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 135/251 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++G+ +K D   +G  I G     K  ++     EM ++GL  N  + T L++ +FKAG 
Sbjct: 445 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 504

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EALS+   +    +   V T    I GL K+G V+EA+  F  + + GL P+V  Y++
Sbjct: 505 LMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 564

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+  +E+A  L DEM  + + P+   Y AL+DG  K    + A  L + M E G
Sbjct: 565 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 624

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y++++ G  +  ++ EA  LFHEM  +G+ P   +  +L+    + G+M++A+
Sbjct: 625 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 684

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G 
Sbjct: 685 NLFREMLQKGF 695



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 133/255 (52%), Gaps = 8/255 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  +   Y  I  GLC   +  ++KL   EM++ GL  +   C+ L+D + + G+
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E L + D M+   I + ++T+ VLI GLCK G + +A +    M   G  PN   +  
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+++ + RA  L DEM KR+++P   +Y A+I+G    +    A  L  +MT  G
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC----ISLLKKHYERGNM 236
           +  ++  Y++L+ G +  G ++EAR L   M   G+ PD I C    IS L K    G M
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPD-IFCYNAIISCLSK---AGKM 435

Query: 237 DEAIELQNEMMGRGL 251
           +EA     E+ GRGL
Sbjct: 436 EEASTYLLEIQGRGL 450



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y  II  L    K E++   L E++  GL  + V     +  Y K G+
Sbjct: 410 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 469

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA    DEMLD  +      + VLI+G  K+G + EA+  F  +   G+ P+V   +A
Sbjct: 470 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 529

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I GL K   ++ A  +F E+ ++ ++PD   Y++LI G+ K    ++A  L + M   G
Sbjct: 530 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 589

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +LV GL + G +Q AR LF  M  +G+ PD +   +++  + +  N+ EA 
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649

Query: 241 ELQNEMMGRGL 251
            L +EM  +G+
Sbjct: 650 SLFHEMPSKGV 660



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N+      YG +I GLC       +  LL +M  +GL  N V+ +TL+  Y   G 
Sbjct: 340 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 399

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LLD M  S +   +  +  +I  L K+G + EA  Y   +   GL P+   + A
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  K   +  A   FDEM    ++P+   YT LI+G+ K  +  EAL++   +  +G
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+   ++ + GL + G +QEA  +F E+  +G++PD     SL+    ++G +++A 
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 579

Query: 241 ELQNEMMGRGL 251
           EL +EM  +G+
Sbjct: 580 ELHDEMCLKGI 590



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y T+I G C      ++  L  EM   G+  ++ +   L+    K G+
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 679

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L  EML      T ++F  LIDG CKS  ++EA   F  M    + P+   YT 
Sbjct: 680 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 738

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  CK   +E A  LF EM +R++I DT  YT+L+ GY K     E   L  +M   G
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y  +++   +  +L EA  L  E++G+G+L    +   L+    +R ++ EA 
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 858

Query: 241 ELQNEMMGRGL 251
           +L +EM   GL
Sbjct: 859 KLLDEMGELGL 869



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 115/247 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  +L  Y  +I GLC   K E +  +L  M   G   N+     L++ Y +      AL
Sbjct: 275 IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL 334

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LLDEM    +  + V++  +I+GLC    +  A     +M   GL PNV VY+ LI G 
Sbjct: 335 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 394

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
             +  IE AR L D M    + PD   Y A+I    K    +EA      +   G+  D 
Sbjct: 395 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 454

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             + + + G S+ G + EA   F EM+  G++P+  L   L+  H++ GN+ EA+ +   
Sbjct: 455 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 514

Query: 246 MMGRGLL 252
           +   G+L
Sbjct: 515 LHALGVL 521



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 111/235 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C   K +++  L  EM    +  + V  TT++D + KAG+  EA  L  EM 
Sbjct: 701 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 760

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  + V  VT+  L+ G  K G   E    F +M   G+ P+   Y  +I   CK++ + 
Sbjct: 761 ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 820

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L DE+  + M+   T +  LI    K E   EA  L + M E+G+   L A ++LV
Sbjct: 821 EAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 880

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
                 G + EA  +F  +   G++PD    I L+  +    + ++A  L  +++
Sbjct: 881 RSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 21/216 (9%)

Query: 61  PSEALSLLDEML---DSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-------------- 103
           P  + S+LD +L    +    + V F +LID   + G++ EA + F              
Sbjct: 134 PYSSSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIR 193

Query: 104 ----GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
                 M + GL PN   YT +  GLC+   +  A+  F+EM K  + PD  A +ALIDG
Sbjct: 194 CNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDG 253

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +++     E L +K+ M   G+ ++L  Y  L+ GL + G +++A  +   MI  G  P+
Sbjct: 254 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
                 L++ +    NM  A+EL +EM  R L+  +
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 349



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 97/212 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D   Y T+I   C   K E++ LL  EM+E  L  +TV  T+LM  Y K G+
Sbjct: 724 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 783

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SE  +L ++M+   ++   VT+ ++I   CK   + EA      +   G+     ++  
Sbjct: 784 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 843

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK+  +  A  L DEM +  + P   A + L+  + +     EA  +   +  +G
Sbjct: 844 LITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG 903

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           +  D      LV G       ++AR L  +++
Sbjct: 904 LVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 126/250 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  DL  + T+I G CIE K + +  L   M    L  + V   TL+D   + G+
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L D+M    I    VT+ +LID  C+ G V +A  +   M + G+ PN+  Y +
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   + + +    +M    + PD   Y  LI GY+K +   +A  L N M +  
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y  L+ G S  G++QEA  +F +M  +GI PD    +S++  H   GN  EA 
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 570

Query: 241 ELQNEMMGRG 250
           +L +EM+ RG
Sbjct: 571 QLHDEMLQRG 580



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 125/236 (52%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++   C   +F+    ++SEM++  +  + V    ++DA F+AG+   A++L+D M+   
Sbjct: 101 MVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKG 160

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++  +VT+  ++ GLC+SG+  +A + F  M DFG+ P+V  +T LI G C+   IE A 
Sbjct: 161 LKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEAL 220

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            ++ EM  R + PD  +++ LI  + +      A+     M   G+  D   YT ++ G 
Sbjct: 221 KIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGF 280

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            R G + +A  +  EM+G G LPD +   +LL    +   + +A  L NEM  RG+
Sbjct: 281 CRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 127/247 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  +  +I G C   + E++  +  EM+  G+  + V  + L+  + + G+   A+
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 255

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           + L EM    +    V + ++I G C++GL+ +A+     M   G  P+V  Y  L++GL
Sbjct: 256 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  +  A  L +EM +R + PD   +T LI GY       +AL L + M    +  D+
Sbjct: 316 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 375

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ G+ R G L +A  L+ +M  R I P+ +    L+  H E+G +++A    +E
Sbjct: 376 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 435

Query: 246 MMGRGLL 252
           M+ +G+L
Sbjct: 436 MINKGIL 442



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 124/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K  +  Y +++ GLC    ++ +  +  EM + G+  +    T L+  + + GE
Sbjct: 156 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 215

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL +  EM    I+  +V+F  LI    + G +  A+ Y   M  FGL P+  +YT 
Sbjct: 216 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 275

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   +  A  + DEM     +PD   Y  L++G  K     +A  L N M E G
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 335

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  DL  +T+L+ G    G L +A  LF  M+ + + PD +   +L+     +G++D+A 
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 395

Query: 241 ELQNEMMGRGLL 252
           +L ++M  R + 
Sbjct: 396 DLWDDMHSREIF 407



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 124/247 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + IK DL  +  +I       K + +   L EM+  GL  + VI T ++  + +AG 
Sbjct: 226 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 285

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+AL + DEM+       VVT+  L++GLCK   + +A      M + G+ P++  +T 
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C +  +++A  LFD M  + + PD   Y  LIDG  +     +A +L + M    
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y+ L+      G +++A     EMI +GILP+ +   S++K +   GN+ +  
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 465

Query: 241 ELQNEMM 247
           +   +MM
Sbjct: 466 KFLQKMM 472



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 117/235 (49%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C      D+  +  EM   G   + V   TL++   K     +A  LL+EM
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 331

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +  +   + TF  LI G C  G + +A+  F  M +  L P++  Y  LIDG+C++  +
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 391

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           ++A +L+D+M  R++ P+   Y+ LID + +    ++A    + M   G+  ++  Y S+
Sbjct: 392 DKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSI 451

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           + G  R G++ + +    +M+   + PD I   +L+  + +   M +A +L N M
Sbjct: 452 IKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 506



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 103/209 (49%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           NT     ++  Y KA E  +  +++ EM    +   VVT  V++D   ++G    A+   
Sbjct: 94  NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
             M   GL P +  Y +++ GLC+    ++A  +F EM    + PD  ++T LI G+ + 
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
              +EAL +   M   G+  DL +++ L+   +R G +  A     EM   G++PD ++ 
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             ++      G M +A+ +++EM+G G L
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCL 302



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 4/222 (1%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           ++S +  +  T    +   L+  Y ++ +P EA      +LD R+ +       L+  L 
Sbjct: 12  IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALS 71

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYT--ALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           ++G    A D +  +  F  +  V  YT   ++   CK    ++   +  EM KR + PD
Sbjct: 72  RAGWPHLAADAYRLV--FSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 129

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              +  ++D   +    + A+ L + M   G+   +  Y S++ GL R G   +A  +F 
Sbjct: 130 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 189

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           EM   G+ PD      L+      G ++EA+++  EM  RG+
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGI 231


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 129/244 (52%), Gaps = 1/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+      I GL    + +++  + SE+KE GL  +    ++L+  + K GE  +A  L 
Sbjct: 612 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 671

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM    I   +  +  L+DGLCKSG ++ A   F  MP+ GL P+   Y+ +IDG CK 
Sbjct: 672 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 731

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A +LF EMP + + P +  Y AL+ G  K    ++A+NL   M + G    L ++
Sbjct: 732 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SF 790

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G  +   +QEA  LF EMI + I+PD +   +++  H + G M+EA  L  EM  
Sbjct: 791 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 850

Query: 249 RGLL 252
           R L+
Sbjct: 851 RNLI 854



 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 140/287 (48%), Gaps = 34/287 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K +  D+  Y ++I G C + + E +  L  EM   G+  N  I   L+D   K+G+
Sbjct: 639 LKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGD 698

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L D M +  +E   VT+  +IDG CKS  V EA   F  MP  G+ P+  VY A
Sbjct: 699 IQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNA 758

Query: 121 LIDGLCK---------------------------------KNC-IERARNLFDEMPKRDM 146
           L+ G CK                                 K+C I+ A  LF EM  + +
Sbjct: 759 LVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 818

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           +PD   YT +ID + K    +EA  L   M E  + +D   YTSL++G ++ G   E   
Sbjct: 819 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFA 878

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           LF +M+ +G+ PDE+    ++  H +  N+ EA +L++E++G+G+L+
Sbjct: 879 LFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLT 925



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 135/251 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++G+ +K D   +G  I G     K  ++     EM ++GL  N  + T L++ +FKAG 
Sbjct: 534 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGN 593

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EALS+   +    +   V T    I GL K+G V+EA+  F  + + GL P+V  Y++
Sbjct: 594 LMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 653

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+  +E+A  L DEM  + + P+   Y AL+DG  K    + A  L + M E G
Sbjct: 654 LISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKG 713

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y++++ G  +  ++ EA  LFHEM  +G+ P   +  +L+    + G+M++A+
Sbjct: 714 LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAM 773

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G 
Sbjct: 774 NLFREMLQKGF 784



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 131/255 (51%), Gaps = 8/255 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  +   Y  I  GLC   +  ++KL   EM++ GL  +   C+ L+D + + G+
Sbjct: 289 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E L + D M+   I + ++T+ VLI GLCK G + +A +    M   G  PN   +  
Sbjct: 349 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCL 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+++ + RA  L DEM KR+++P   +Y A+I+G    +    A  L  +MT  G
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC----ISLLKKHYERGNM 236
           +  ++  Y+ L+   +  G ++EAR L   M   G+ PD I C    IS L K    G M
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPD-IFCYNAIISCLSK---AGKM 524

Query: 237 DEAIELQNEMMGRGL 251
           +EA     E+ GRGL
Sbjct: 525 EEASTYLLEIQGRGL 539



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y  II  L    K E++   L E++  GL  + V     +  Y K G+
Sbjct: 499 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 558

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA    DEMLD  +      + VLI+G  K+G + EA+  F R+   G+ P+V   +A
Sbjct: 559 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSA 618

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I GL K   ++ A  +F E+ ++ ++PD   Y++LI G+ K    ++A  L + M   G
Sbjct: 619 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 678

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +LV GL + G +Q AR LF  M  +G+ PD +   +++  + +  N+ EA 
Sbjct: 679 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 738

Query: 241 ELQNEMMGRGL 251
            L +EM  +G+
Sbjct: 739 SLFHEMPSKGV 749



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N+      YG +I GLC       +  LL +M  +GL  N V+ + L+ AY   G 
Sbjct: 429 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGR 488

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LLD M  S +   +  +  +I  L K+G + EA  Y   +   GL P+   + A
Sbjct: 489 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 548

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  K   +  A   FDEM    ++P+   YT LI+G+ K  +  EAL++  R+  +G
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+   ++ + GL + G +QEA  +F E+  +G++PD     SL+    ++G +++A 
Sbjct: 609 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 668

Query: 241 ELQNEMMGRGL 251
           EL +EM  +G+
Sbjct: 669 ELHDEMCLKGI 679



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y T+I G C      ++  L  EM   G+  ++ +   L+    K G+
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 768

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L  EML      T ++F  LIDG CKS  ++EA   F  M    + P+   YT 
Sbjct: 769 MEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 827

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  CK   +E A  LF EM +R++I DT  YT+L+ GY K     E   L  +M   G
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y  +++   +  +L EA  L  E++G+G+L    +   L+    +R ++ EA 
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 947

Query: 241 ELQNEMMGRGL 251
           +L +EM   GL
Sbjct: 948 KLLDEMGELGL 958



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 114/247 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  +L  Y  +I GLC   K E +  +L  M   G   N+     L++ Y +      AL
Sbjct: 364 IPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRAL 423

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LLDEM    +  + V++  +I+GLC    +  A     +M   GL PNV VY+ LI   
Sbjct: 424 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAY 483

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
             +  IE AR L D M    + PD   Y A+I    K    +EA      +   G+  D 
Sbjct: 484 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 543

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             + + + G S+ G + EA   F EM+  G++P+  L   L+  H++ GN+ EA+ +   
Sbjct: 544 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRR 603

Query: 246 MMGRGLL 252
           +   G+L
Sbjct: 604 LHALGVL 610



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 108/207 (52%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           T L+ A  K G+   A  +L EM +  +      + ++I+G+C+ G + EA++    M +
Sbjct: 232 TYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGE 291

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            GL PN   YT +  GLC+   +  A+  F+EM K  + PD  A +ALIDG+++     E
Sbjct: 292 KGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE 351

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
            L +K+ M   G+ ++L  Y  L+ GL + G +++A  +   M+  G  P+      L++
Sbjct: 352 VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIE 411

Query: 229 KHYERGNMDEAIELQNEMMGRGLLSGS 255
            +    NM  A+EL +EM  R L+  +
Sbjct: 412 GYCREHNMGRALELLDEMEKRNLVPSA 438



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 110/235 (46%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            + T+I G C   K +++  L  EM    +  + V  TT++D + KAG+  EA  L  EM 
Sbjct: 790  FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 849

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  + V  VT+  L+ G  K G   E    F +M   G+ P+   Y  +I   CK++ + 
Sbjct: 850  ERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLV 909

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             A  L DE+  + M+   T +  LI    K E   EA  L + M E+G+   L A  +LV
Sbjct: 910  EAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLV 969

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
                  G + EA  +F  +   G++PD    I L+  +    + ++A  L  +++
Sbjct: 970  RSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 104/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++ V+   L+D+Y + G   EA ++     +  I ++++    L+  L K G++      
Sbjct: 156 SSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKV 215

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M D  +  +V  YT L+  LCK   +  A+ +  EM ++ + P+   Y+ +I+G  +
Sbjct: 216 YNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQ 275

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                EA+ LK  M E G+  +   YT +  GL R   + EA++ F EM   G+ PD   
Sbjct: 276 VGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNA 335

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
           C +L+      G++DE + +++ M+  G+
Sbjct: 336 CSALIDGFMREGDIDEVLRIKDVMVSCGI 364



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 35/278 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  ++  LC       +K +L EM E GL  N  I + +++   + G+  EA+ L 
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELK 286

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP--------------- 113
             M +  +     T+ ++  GLC++  + EA   F  M   GL P               
Sbjct: 287 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 346

Query: 114 --------------------NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
                               N+  Y  LI GLCK   +E+A  +   M      P++  +
Sbjct: 347 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF 406

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             LI+GY +  +   AL L + M +  +     +Y +++ GL  C  L  A  L  +M  
Sbjct: 407 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 466

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G+ P+ ++   L+  +   G ++EA  L + M   G+
Sbjct: 467 SGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGV 504



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 96/212 (45%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K I  D   Y T+I   C   K E++ LL  EM+E  L  +TV  T+LM  Y K G+
Sbjct: 813  MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 872

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             SE  +L ++M+   ++   VT+ ++I   CK   + EA      +   G+     ++  
Sbjct: 873  SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 932

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LI  LCK+  +  A  L DEM +  + P   A   L+  + +     EA  +   +  +G
Sbjct: 933  LITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLG 992

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
            +  D      LV G       ++AR L  +++
Sbjct: 993  LVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 68/140 (48%)

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
            V+  LID   +   ++ A N+F       ++       +L+   LK    +    + N 
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           M +  +  D+  YT LV  L + G L+ A+ +  EM  +G+ P+E +   +++   + G+
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 236 MDEAIELQNEMMGRGLLSGS 255
           +DEA+EL+  M  +GL+  +
Sbjct: 279 IDEAVELKRSMGEKGLVPNT 298


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 133/239 (55%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GLC   +F  +  L  +M   G   +     T+++   K GE + A  LL +M 
Sbjct: 166 FTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKME 225

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++  +  +VT+  LID LC+  LV EA+D F  M   G+ P++  YT+LI GLCK +  +
Sbjct: 226 EAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWK 285

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L +EM   +++PD   +  L+D + K     EAL +   MTE+GV+ ++  Y+SL+
Sbjct: 286 EASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLM 345

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +G S    + EAR LFH MI +G  P+      L+  + +   +DEA++L NEM+ +GL
Sbjct: 346 YGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGL 404



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  D+  Y ++I GLC  S+++++  LL+EM    +  + V    L+D + K G+
Sbjct: 259 MKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGK 318

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL +L  M +  +E  VVT+  L+ G      V EA   F  M   G  PN+  Y  
Sbjct: 319 VSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNI 378

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   I+ A  LF+EM  + + P+  +Y  LI G+ +    +EA +L   M   G
Sbjct: 379 LINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNG 438

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y+ L+ G  + G+L +A  LF  M    + P+ ++   L+    + GN  +A 
Sbjct: 439 NLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDAR 498

Query: 241 ELQNEMMGRGL 251
           +L +E+  +GL
Sbjct: 499 KLFSELFVQGL 509



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 121/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    + ++  Y T+I  LC +    ++  + S MK  G++ +    T+L+    K   
Sbjct: 224 MEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSR 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +LL+EM    I   +VTF VL+D  CK G V EA+     M + G+ PNV  Y++
Sbjct: 284 WKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSS 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G      +  AR LF  M  +   P+  +Y  LI+GY K +   EA+ L N M   G
Sbjct: 344 LMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +  +Y +L+ G  + G L+EA+ LF  M   G LPD      LL    ++G + +A 
Sbjct: 404 LTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAF 463

Query: 241 ELQNEM 246
            L   M
Sbjct: 464 RLFRAM 469



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 120/248 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++  Y ++++G  + +   +++ L   M   G   N      L++ Y KA    EA+
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +EM+   +    V++  LI G C+ G +REA D F  M   G  P++  Y+ L+DG 
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGF 453

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  + +A  LF  M    + P+   YT L+    K  + K+A  L + +   G+   +
Sbjct: 454 CKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHV 513

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+++ GL + G L EA   F  M   G  PDEI    +++   +  +   A+ L  E
Sbjct: 514 QLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGE 573

Query: 246 MMGRGLLS 253
           M  RG ++
Sbjct: 574 MRDRGFIA 581



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 117/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + D+  Y TII GLC   +   +  LL +M+E G   N V  +TL+D+  +   
Sbjct: 189 MVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRL 248

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL +   M    I   + T+  LI GLCK    +EA      M    + P++  +  
Sbjct: 249 VNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNV 308

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D  CK+  +  A  +   M +  + P+   Y++L+ GY       EA  L + M   G
Sbjct: 309 LVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKG 368

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++ +Y  L+ G  +   + EA  LF+EMI +G+ P+ +   +L+    + G + EA 
Sbjct: 369 CKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQ 428

Query: 241 ELQNEMMGRG 250
           +L   M   G
Sbjct: 429 DLFRNMCTNG 438



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 108/220 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M+  GL+ N    +  M+ + +        S+L +++   ++ T+VTF  LI+GLC
Sbjct: 115 LSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLC 174

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G   +A++ F  M   G  P+V  Y  +I+GLCK      A  L  +M +    P+  
Sbjct: 175 KVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMV 234

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ LID   +     EAL++ + M   G+  D+  YTSL+ GL +    +EA  L +EM
Sbjct: 235 TYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEM 294

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               I+PD +    L+    + G + EA+ +   M   G+
Sbjct: 295 TSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV 334



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 105/225 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K ++  Y  +I G C   + +++  L +EM   GLT N V   TL+  + + G+
Sbjct: 364 MITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGK 423

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L   M  +     + T+ +L+DG CK G + +A   F  M    L PN+ +YT 
Sbjct: 424 LREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTI 483

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+  +CK    + AR LF E+  + + P    YT +I+G  K     EAL     M   G
Sbjct: 484 LVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADG 543

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
              D  +Y  ++ GL +      A +L  EM  RG + D   C+S
Sbjct: 544 CPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVRPCLS 588



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 1/197 (0%)

Query: 51  LMDAYFKAGEPSEA-LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           L+ A  K G+  +  +SL  +M    +   + T  + ++  C+   V        ++   
Sbjct: 98  LLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKL 157

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           GL P +  +T LI+GLCK     +A  LFD+M  +   PD   Y  +I+G  K      A
Sbjct: 158 GLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAA 217

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L  +M E G   ++  Y++L+  L R   + EA  +F  M  +GI PD     SL++ 
Sbjct: 218 AGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQG 277

Query: 230 HYERGNMDEAIELQNEM 246
             +     EA  L NEM
Sbjct: 278 LCKFSRWKEASALLNEM 294


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 127/257 (49%), Gaps = 2/257 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    D   Y  +I GLC +++ E    L+ EM+  G +   V  TTL+  +  AG 
Sbjct: 117 MEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGR 176

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH--PNVAVY 118
              A+ +LDEM    I    VT+  LI GLC  G V  AI     M   G    PNV  Y
Sbjct: 177 VDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTY 236

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           T LI GLC+K   E      DEM      P+   YTALI G  +  SF EA  L N M  
Sbjct: 237 TQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVA 296

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
           +G +LD+  Y SL+ GL + G L  AR +   M+ +G+ PD     SL++   + G +DE
Sbjct: 297 IGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDE 356

Query: 239 AIELQNEMMGRGLLSGS 255
           A+ L  EM  +G++  S
Sbjct: 357 ALGLMQEMRAKGIVPNS 373



 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 124/254 (48%), Gaps = 2/254 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +     +  Y T+I G C   + + +  +L EM+  G+T NTV  T L+      GE
Sbjct: 152 MQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGE 211

Query: 61  PSEALSLLDEMLDSRIEV--TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
              A+ +L EM     E    VVT+  LI GLC+ GL    +++   M   G  PN A Y
Sbjct: 212 VERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATY 271

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           TALI GLC+K     A  L +EM       D   Y +LIDG  K      A  ++  M E
Sbjct: 272 TALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVE 331

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            GV  D+  YTSL+ GL   G L EA  L  EM  +GI+P+ +   +L+    +    D 
Sbjct: 332 KGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDH 391

Query: 239 AIELQNEMMGRGLL 252
           A++L NEM   GL+
Sbjct: 392 ALQLVNEMKSNGLM 405



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 102/220 (46%), Gaps = 2/220 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG--LTANTVICTTLMDAYFKA 58
           M+ + I  +   Y  +I GLC   + E + L+L EMK  G     N V  T L+    + 
Sbjct: 187 MEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQK 246

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G     +  LDEM+ S       T+  LI GLC+ G   EA      M   G   +V +Y
Sbjct: 247 GLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIY 306

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            +LIDGLCK   ++ AR +   M ++ + PD   YT+LI G        EAL L   M  
Sbjct: 307 NSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRA 366

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
            G+  +   YT+L+ G ++      A  L +EM   G++P
Sbjct: 367 KGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMP 406



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 3/196 (1%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           + G PS       ++L+S+ +  V+++   I+GLCK G + EA++ F  M + G  P+  
Sbjct: 69  RRGIPSSLRIYRPKLLNSQ-DTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y  LI+GLCK   +E   +L DEM  R   P    YT LI G+        A+++ + M
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG--ILPDEILCISLLKKHYERG 234
              G+  +   YT+L+ GL  CG ++ A ++  EM  RG    P+ +    L+    ++G
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247

Query: 235 NMDEAIELQNEMMGRG 250
             +  +E  +EM+  G
Sbjct: 248 LFEMGMEFLDEMIISG 263


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 142/282 (50%), Gaps = 35/282 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ +L  Y  +I GLC   + E++  +L+EM   G   + V   TL++ Y K G   +AL
Sbjct: 269 LEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQAL 328

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EML + +   VVT+  LI+ +CK+G +  A+++F +M   GL PN   YT+LI+G 
Sbjct: 329 VLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGF 388

Query: 126 CKKNCIERARNLFDEMPK-----------------------------------RDMIPDT 150
            +K  ++ A  ++DEM +                                   + + PD 
Sbjct: 389 SQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDV 448

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            +Y+ +I G+ +++    A  +   M E GV  D   Y+SL+ GL     L EA  LF E
Sbjct: 449 VSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQE 508

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           M+ + +LPDE    SL+  + + G+++EA+ L +EM+ +G L
Sbjct: 509 MLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFL 550



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 112/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C     E       EM+ N    N V   T++ AY K     EA  LL  M 
Sbjct: 206 YNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMG 265

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +E  ++T+ ++I+GLC+ G + E       M   G  P+   Y  L++G CK     
Sbjct: 266 LEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFH 325

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L  EM +  + PD   YT+LI+   K  +   A+   ++M   G+  +   YTSL+
Sbjct: 326 QALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLI 385

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G S+ G + EA  ++ EMI  G  P  +   +LL  H   G M+EAI L   M G+GL
Sbjct: 386 NGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGL 444



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 108/216 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y ++I  +C       +     +M   GL  N V  T+L++ + + G   EA 
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAY 398

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + DEM+ S    T+VT+  L++G C SG + EAI     M   GL P+V  Y+ +I G 
Sbjct: 399 RIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGF 458

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   ++RA  +  EM ++ + PD   Y++LI G  +     EA +L   M    +  D 
Sbjct: 459 CRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDE 518

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
             YTSL+ G  + G L EA  L  EMI +G LPD +
Sbjct: 519 FTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTV 554



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 107/217 (49%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           EM  +G++ N      L+  +  AG     L   +EM  +R    VVT+  +I   CK  
Sbjct: 193 EMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLK 252

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + EA      M   GL PN+  Y  +I+GLC+   IE    +  EM ++   PD   Y 
Sbjct: 253 RIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYN 312

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            L++GY K  +F +AL L + M   G+  D+  YTSL+  + + G+L  A   F +M  R
Sbjct: 313 TLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVR 372

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G+ P+ +   SL+    ++G MDEA  + +EM+  G 
Sbjct: 373 GLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGF 409



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 114/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I   C   + +++  LL  M   GL  N +    +++   + G   E   +L EM 
Sbjct: 241 YNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD 300

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   VT+  L++G CK G   +A+     M   GL P+V  YT+LI+ +CK   + 
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLN 360

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA   FD+M  R + P+   YT+LI+G+ +     EA  + + M   G    +  Y +L+
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G    G ++EA  L   M G+G+ PD +   +++        +D A ++  EM+ +G+
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGV 479



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 16/257 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+GK +  D+  Y TII G C   + + +  + +EM E G++ + +  ++L+    +   
Sbjct: 439 MEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRR 498

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L  EML+  +     T+  LI+G CK G + EA++    M   G  P+   Y  
Sbjct: 499 LNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNV 558

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY---------------TALIDGYLKHES 165
           LI+GL K+     A+ L  ++   + IP+   Y                ALI G+     
Sbjct: 559 LINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGL 618

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             EA  +   M +     +   Y  ++ G  R G++ +A  L+ EM+  G +P  +  I+
Sbjct: 619 MNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIA 678

Query: 226 LLKKHYERGNMDEAIEL 242
           L+K  Y  G MDE + L
Sbjct: 679 LVKALYSEG-MDEQLNL 694



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 15/267 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y ++I GLC + +  ++  L  EM    L  +    T+L++ Y K G+
Sbjct: 474 MVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGD 533

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-- 118
            +EAL+L DEM+        VT+ VLI+GL K    REA     ++      PN   Y  
Sbjct: 534 LNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDT 593

Query: 119 -------------TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
                         ALI G C K  +  A  +F+ M KR+  P+   Y  +I G+ +  +
Sbjct: 594 LIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGN 653

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             +A  L   M + G         +LV  L   G  ++  ++  +++    L D  L  +
Sbjct: 654 VHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKA 713

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLL 252
           L++ +++ GN+D    L  EM   G L
Sbjct: 714 LVQINHKEGNIDAVFNLLTEMAKDGFL 740



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 1/144 (0%)

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK-HESFK 167
           F  + + AV+  ++      N IE+A N+ D       +P   +Y A++D  ++  +   
Sbjct: 126 FMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVI 185

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A  +   M   GV L++ +Y  L+ G    G+L+     F EM     LP+ +   +++
Sbjct: 186 FAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVI 245

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
             + +   +DEA +L   M   GL
Sbjct: 246 GAYCKLKRIDEAFKLLRSMGLEGL 269


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  147 bits (371), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 130/250 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   +  + TI++G C E K  D++  LS+M +  L  + +   TL+  + + G 
Sbjct: 333 MVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGN 392

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LLDE+    +   +VT+  LIDGLC+ G +  A+     M + G+HP+V  YT 
Sbjct: 393 IGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTV 452

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK   +  A+  FDEM    + PD  AYTA I G LK     +A  L+  M   G
Sbjct: 453 LVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKG 512

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y   V GL + G+L+EA  L  +MI  G +PD +   S +  H E G++ E  
Sbjct: 513 FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGR 572

Query: 241 ELQNEMMGRG 250
           E+  +M+ RG
Sbjct: 573 EIFYDMLSRG 582



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 126/252 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  D+  Y T+I+G C      ++ +LL E++   L+ N V   TL+D   + G+
Sbjct: 368 MLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGD 427

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L ++M++  I   VVT+ VL++G CK G +  A ++F  M   GL P+   YTA
Sbjct: 428 LETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTA 487

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  K     +A  L +EM  +   PD   Y   ++G  K  + +EA  L  +M   G
Sbjct: 488 RIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDG 547

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   YTS +      GHL+E R +F++M+ RG  P  +    L+  H   G +D A+
Sbjct: 548 HVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAM 607

Query: 241 ELQNEMMGRGLL 252
               EM  +G++
Sbjct: 608 AYFLEMQEKGVV 619



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 126/246 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+  +  Y T++   C   + + +  L+ +M+E G   + V    L++   K GE  +A 
Sbjct: 233 IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAK 292

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EM  + + V+  T+  LI G CK GL+ EA+  +  M   G+ P VA +  ++ G 
Sbjct: 293 GLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGF 352

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  +  AR    +M K++++PD  +Y  LI G+ +  +  EA  L + +    +  ++
Sbjct: 353 CKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNI 412

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL R G L+ A  L  +MI RGI PD +    L+    + GNM  A E  +E
Sbjct: 413 VTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDE 472

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 473 MLHVGL 478



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 117/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GL  + + + +K L+ EM + GL  +      L+  Y K G   EAL+L +EM+
Sbjct: 275 FNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMV 334

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  TV +   ++ G CK G + +A      M    L P++  Y  LI G C+   I 
Sbjct: 335 TRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIG 394

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L DE+  R++  +   Y  LIDG  +    + AL LK  M   G+  D+  YT LV
Sbjct: 395 EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLV 454

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G++  A+  F EM+  G+ PD+    + +    + G+  +A +LQ EM+ +G 
Sbjct: 455 NGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGF 513



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 109/249 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y  ++ G C       +K    EM   GL  +    T  +    K G+
Sbjct: 438 MINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGD 497

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L +EML       V+T+ V ++GLCK G + EA +   +M   G  P+   YT+
Sbjct: 498 TAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTS 557

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +    +   +   R +F +M  R   P    YT LI  +  +     A+     M E G
Sbjct: 558 FMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKG 617

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y  L+ G  +   + +A   F EM  +GI P++     L+ ++   G   EA+
Sbjct: 618 VVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEAL 677

Query: 241 ELQNEMMGR 249
            L  +M+G+
Sbjct: 678 RLYAQMLGK 686



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 105/221 (47%)

Query: 31  LLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           L+  +M  N    +   C  ++          +AL +   M +  I  TV T+  ++   
Sbjct: 188 LVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSF 247

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           CK G V+ A+D   +M + G +P+   +  LI+GL KK  +++A+ L  EM K  +    
Sbjct: 248 CKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSP 307

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LI GY K     EAL L   M   GV   + ++ ++++G  + G + +AR    +
Sbjct: 308 YTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSD 367

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M+ + ++PD I   +L+      GN+ EA  L +E+  R L
Sbjct: 368 MLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNL 408



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 92/190 (48%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           + L + ++M+ +R    V     ++  L    L+ +A++ +  M ++G+ P V  Y  ++
Sbjct: 185 QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTML 244

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
              CK   ++RA +L  +M +R   P    +  LI+G  K    ++A  L   M + G+ 
Sbjct: 245 HSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLR 304

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           +    Y  L+ G  + G L EA  L+ EM+ RG+ P      +++    + G M +A + 
Sbjct: 305 VSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQ 364

Query: 243 QNEMMGRGLL 252
            ++M+ + L+
Sbjct: 365 LSDMLKKNLM 374



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 64/131 (48%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
            + + +  +M   G T   V  T L+ A+   G    A++   EM +  +   V+T+ VL
Sbjct: 569 REGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVL 628

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I+G CK   + +A  +F  M + G+ PN   YT LI+  C     + A  L+ +M  + +
Sbjct: 629 INGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRI 688

Query: 147 IPDTTAYTALI 157
            PD+  + AL+
Sbjct: 689 RPDSCTHGALL 699



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 77/166 (46%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           ++D L    L  + +  F +M      P+V     ++  L  KN + +A  ++  M +  
Sbjct: 173 IVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYG 232

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P  T Y  ++  + K    + AL+L  +M E G       +  L+ GLS+ G LQ+A+
Sbjct: 233 IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAK 292

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L  EM   G+         L+  + ++G + EA+ L  EM+ RG+
Sbjct: 293 GLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGV 338



 Score = 42.0 bits (97), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 51/115 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I    +  + + +     EM+E G+  N +    L++ + K  +  +A     EM 
Sbjct: 590 YTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQ 649

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           +  I     T+ +LI+  C  G  +EA+  + +M    + P+   + AL+  L K
Sbjct: 650 EKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDK 704



 Score = 40.0 bits (92), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 41/92 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +  ++  Y  +I G C   K + +     EM+E G+  N    T L++     G+
Sbjct: 613 MQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGK 672

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
             EAL L  +ML  RI     T   L+  L K
Sbjct: 673 WQEALRLYAQMLGKRIRPDSCTHGALLKKLDK 704


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 133/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ +L  Y  II GLC E   +++  +L EM   G T + V   TL++ Y K G 
Sbjct: 275 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 334

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL +  EM+ + +  +VVT+  LI+ +CK+  +  A+++F +M   GL PN   YT 
Sbjct: 335 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  ++  +  A  + +EM +    P    Y A I G+   E  +EAL +   M E G
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ +Y++++ G  R G L  A  +  EM+ +G+ PD +   SL++   E   + EA 
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 514

Query: 241 ELQNEMMGRGL 251
           +L  EM+  GL
Sbjct: 515 DLSQEMLDMGL 525



 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 125/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y T++ G C E  F  + ++ +EM  NG++ + V  T L+++  KA  
Sbjct: 310 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 369

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+   D+M    +     T+  LIDG  + GL+ EA      M + G  P+V  Y A
Sbjct: 370 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 429

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G C    +E A  +  EM ++ + PD  +Y+ +I G+ +      A  +K  M E G
Sbjct: 430 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 489

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y+SL+ GL     L EA  L  EM+  G+ PDE    +L+  +   G++++A+
Sbjct: 490 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 549

Query: 241 ELQNEMMGRGLL 252
            L +EM+ +G L
Sbjct: 550 HLHDEMIHKGFL 561



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  ++  Y  +I G C   + +       EM+ NG   N V   TL+DAY K G   EA 
Sbjct: 210 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 269

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA------IDYFGRMPD----------- 108
            LL  M    ++  ++++ V+I+GLC+ G ++EA      + Y G  PD           
Sbjct: 270 GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 329

Query: 109 ------------------FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
                              G+ P+V  YTALI+ +CK   + RA   FD+M  R + P+ 
Sbjct: 330 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 389

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             YT LIDG+ +     EA  + N MTE G    +  Y + + G      ++EA  +  E
Sbjct: 390 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 449

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M+ +G+ PD +   +++     +G +D A +++ EM+ +G+
Sbjct: 450 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 114/237 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +   +  Y  +I  +C       +     +M+  GL  N    TTL+D + + G  +EA 
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +L+EM +S    +VVT+   I G C    + EA+     M + GL P+V  Y+ +I G 
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+K  ++RA  +  EM ++ + PD   Y++LI G  +     EA +L   M ++G+  D 
Sbjct: 470 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 529

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             YT+L+      G L +A  L  EMI +G LPD +    L+    ++    EA  L
Sbjct: 530 FTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 586



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 104/217 (47%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           EM  + ++ N      L+  +   GE  + L    EM  +     VVT+  LID  CK G
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + EA      M   G+ PN+  Y  +I+GLC++  ++ A  + +EM  +   PD   Y 
Sbjct: 264 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 323

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            L++GY K  +F +AL +   M   GV   +  YT+L+  + +  +L  A   F +M  R
Sbjct: 324 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 383

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G+ P+E    +L+     +G ++EA  + NEM   G 
Sbjct: 384 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 420



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 2/217 (0%)

Query: 37  KENGLTANTVICTTLMDAYFKAGEPSE--ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           K +G     +   +++DA  ++    +  A  +  EM+ SR+   V T+ +LI G C  G
Sbjct: 169 KSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVG 228

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            +++ +  FG M   G  PNV  Y  LID  CK   I+ A  L   M  + M P+  +Y 
Sbjct: 229 ELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYN 288

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +I+G  +  S KEA  +   M   G   D   Y +L+ G  + G+  +A V+  EM+  
Sbjct: 289 VIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRN 348

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G+ P  +   +L+    +  N++ A+E  ++M  RGL
Sbjct: 349 GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 385



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 112/228 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ +   Y T+I G   +    ++  +L+EM E+G + + V     +  +     
Sbjct: 380 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER 439

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL ++ EM++  +   VV++  +I G C+ G +  A      M + G+ P+   Y++
Sbjct: 440 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 499

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC+   +  A +L  EM    + PD   YT LI+ Y       +AL+L + M   G
Sbjct: 500 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 559

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
              D   Y+ L+ GL++    +EA+ L  ++I    +P ++   +L++
Sbjct: 560 FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 607



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 118/270 (43%), Gaps = 15/270 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y ++I GLC   +  ++  L  EM + GL  +    TTL++AY   G+
Sbjct: 485 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 544

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-- 118
            ++AL L DEM+        VT+ VLI+GL K    REA     ++      P+   Y  
Sbjct: 545 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 604

Query: 119 -------------TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
                         ALI G C K  +  A  +F+ M +R+  P    Y  +I G+ +  +
Sbjct: 605 LIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGN 664

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             +A NL   M   G         +L+  L + G  +E   +  + +    L +  L   
Sbjct: 665 LPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKV 724

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           L++ +++ GNM+  + +  +M   GLL  S
Sbjct: 725 LVEINHKEGNMEAVLNVLTDMAKDGLLPNS 754


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 133/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ +L  Y  II GLC E   +++  +L EM   G T + V   TL++ Y K G 
Sbjct: 71  MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 130

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL +  EM+ + +  +VVT+  LI+ +CK+  +  A+++F +M   GL PN   YT 
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  ++  +  A  + +EM +    P    Y A I G+   E  +EAL +   M E G
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ +Y++++ G  R G L  A  +  EM+ +G+ PD +   SL++   E   + EA 
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310

Query: 241 ELQNEMMGRGL 251
           +L  EM+  GL
Sbjct: 311 DLSQEMLDMGL 321



 Score =  140 bits (353), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 125/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y T++ G C E  F  + ++ +EM  NG++ + V  T L+++  KA  
Sbjct: 106 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 165

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+   D+M    +     T+  LIDG  + GL+ EA      M + G  P+V  Y A
Sbjct: 166 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 225

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G C    +E A  +  EM ++ + PD  +Y+ +I G+ +      A  +K  M E G
Sbjct: 226 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 285

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y+SL+ GL     L EA  L  EM+  G+ PDE    +L+  +   G++++A+
Sbjct: 286 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 345

Query: 241 ELQNEMMGRGLL 252
            L +EM+ +G L
Sbjct: 346 HLHDEMIHKGFL 357



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  ++  Y  +I G C   + +       EM+ NG   N V   TL+DAY K G   EA 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA------IDYFGRMPD----------- 108
            LL  M    ++  ++++ V+I+GLC+ G ++EA      + Y G  PD           
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 109 ------------------FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
                              G+ P+V  YTALI+ +CK   + RA   FD+M  R + P+ 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             YT LIDG+ +     EA  + N MTE G    +  Y + + G      ++EA  +  E
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M+ +G+ PD +   +++     +G +D A +++ EM+ +G+
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 119/255 (46%), Gaps = 15/255 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y   I G C+  + E++  ++ EM E GL  + V  +T++  + + GE   A  +  EM+
Sbjct: 223 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 282

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +    VT+  LI GLC+   + EA D    M D GL P+   YT LI+  C +  + 
Sbjct: 283 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 342

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL---------------KNRMT 177
           +A +L DEM  +  +PD   Y+ LI+G  K    +EA  L                + + 
Sbjct: 343 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI 402

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E   +++  +  +L+ G    G + EA  +F  M+ R   P E +   ++  H   GN+ 
Sbjct: 403 ENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLP 462

Query: 238 EAIELQNEMMGRGLL 252
           +A  L  EM+  G +
Sbjct: 463 KAFNLYKEMIHSGFV 477



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 114/237 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +   +  Y  +I  +C       +     +M+  GL  N    TTL+D + + G  +EA 
Sbjct: 146 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 205

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +L+EM +S    +VVT+   I G C    + EA+     M + GL P+V  Y+ +I G 
Sbjct: 206 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+K  ++RA  +  EM ++ + PD   Y++LI G  +     EA +L   M ++G+  D 
Sbjct: 266 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 325

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             YT+L+      G L +A  L  EMI +G LPD +    L+    ++    EA  L
Sbjct: 326 FTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 382



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 90/181 (49%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M+ SR+   V T+ +LI G C  G +++ +  FG M   G  PNV  Y  LID  CK   
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           I+ A  L   M  + M P+  +Y  +I+G  +  S KEA  +   M   G   D   Y +
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ G  + G+  +A V+  EM+  G+ P  +   +L+    +  N++ A+E  ++M  RG
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 251 L 251
           L
Sbjct: 181 L 181



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 112/228 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ +   Y T+I G   +    ++  +L+EM E+G + + V     +  +     
Sbjct: 176 MRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLER 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL ++ EM++  +   VV++  +I G C+ G +  A      M + G+ P+   Y++
Sbjct: 236 MEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSS 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC+   +  A +L  EM    + PD   YT LI+ Y       +AL+L + M   G
Sbjct: 296 LIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 355

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
              D   Y+ L+ GL++    +EA+ L  ++I    +P ++   +L++
Sbjct: 356 FLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 403



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 15/257 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y ++I GLC   +  ++  L  EM + GL  +    TTL++AY   G+
Sbjct: 281 MVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-- 118
            ++AL L DEM+        VT+ VLI+GL K    REA     ++      P+   Y  
Sbjct: 341 LNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDT 400

Query: 119 -------------TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
                         ALI G C K  +  A  +F+ M +R+  P    Y  +I G+ +  +
Sbjct: 401 LIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGN 460

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             +A NL   M   G         +L+  L + G  +E   +  + +    L +  L   
Sbjct: 461 LPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKV 520

Query: 226 LLKKHYERGNMDEAIEL 242
           L++ +++ GNM+  + +
Sbjct: 521 LVEINHKEGNMEAVLNV 537


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 130/243 (53%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC +     ++ L++EM+  G   N +  T L+D + K G   EA ++L
Sbjct: 13  DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 72

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM    + +  V +  LI  LCK   V++A++ FG M   G  P++  + +LI GLCK 
Sbjct: 73  DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 132

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N  E A  L+ +M    +I +T  Y  LI  +L+  + +EAL L N M   G  LD   Y
Sbjct: 133 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 192

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+  L R G++++   LF +M+ +G+ P+ I C  L+      GN+  A+E   +M+ 
Sbjct: 193 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 252

Query: 249 RGL 251
           RGL
Sbjct: 253 RGL 255



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 123/237 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  + ++I+GLC  +KFE++  L  +M   G+ ANT+   TL+ A+ + G 
Sbjct: 110 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 169

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L+++ML     +  +T+  LI  LC++G + + +  F  M   GL+PN      
Sbjct: 170 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 229

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC+   I+ A     +M  R + PD   Y +LI+G  K    +EALNL +++   G
Sbjct: 230 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 289

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           +  D   Y +L+    + G   +A +L    +  G +P+E+    L+    + G+ +
Sbjct: 290 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 95/182 (52%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + ML       + T+  LI GLCK G +  A +    M   G  PNV  YT LID  CK+
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E ARN+ DEM  + +  +   Y  LI    K E  ++ALN+   M+  G   D+  +
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SL++GL +    +EA  L+ +M+  G++ + I   +L+     RG M EA++L N+M+ 
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 249 RG 250
           RG
Sbjct: 183 RG 184



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 4/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  +   Y  +I  LC + K +D+  +  +M   G   +     +L+    K  +
Sbjct: 75  MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 134

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L  +ML   +    +T+  LI    + G ++EA+     M   G   +   Y  
Sbjct: 135 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 194

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC+   IE+   LF++M  + + P+  +   LI+G  +  + + AL     M   G
Sbjct: 195 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 254

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y SL+ GL + G  QEA  LF ++   GI PD I   +L+  H + G  D+A 
Sbjct: 255 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA- 313

Query: 241 ELQNEMMGRGLLSG 254
              + ++ RG+ SG
Sbjct: 314 ---HLLLSRGVDSG 324


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  147 bits (370), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 138/252 (54%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  D+  Y T+I G CI    +++  LL+EMK   +  N      L+DA  K G+  E
Sbjct: 226 KGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKE 285

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL  M+ + I+  V T+  LIDG      V+ A   F  M   G+ P+V  YT +I+
Sbjct: 286 AKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMIN 345

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   ++ A +LF+EM  ++MIPD   Y +LIDG  K+   + A+ L  RM E G+  
Sbjct: 346 GLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQP 405

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+ +YT L+ GL + G L++A+ +F  ++ +G   +      L+ +  + G  DEA++L+
Sbjct: 406 DVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLK 465

Query: 244 NEMMGRGLLSGS 255
           ++M  +G +  +
Sbjct: 466 SKMEDKGCMPDA 477



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 134/252 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK KNI  ++  +  +I  L  E K +++K+LL+ M +  +  +     +L+D YF   E
Sbjct: 258 MKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDE 317

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +   M    +   V  +  +I+GLCK+ +V EA+  F  M    + P++  Y +
Sbjct: 318 VKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNS 377

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK + +ERA  L   M ++ + PD  +YT L+DG  K    ++A  +  R+   G
Sbjct: 378 LIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKG 437

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             L+++AYT L+  L + G   EA  L  +M  +G +PD +    +++  +E+   D+A 
Sbjct: 438 YHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAE 497

Query: 241 ELQNEMMGRGLL 252
           ++  EM+ RGLL
Sbjct: 498 KILREMIARGLL 509



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 115/239 (48%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
            T+I GLC   + + +     ++   G   + V   TL++   K GE      LL ++  
Sbjct: 131 NTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEG 190

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             ++  VV +  +I+ LCK+ L+ +A D +  M   G+ P+V  YT LI G C    ++ 
Sbjct: 191 HSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKE 250

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A +L +EM  +++ P+   +  LID   K    KEA  L   M +  +  D+  Y SL+ 
Sbjct: 251 AFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLID 310

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G      ++ A+ +F+ M  RG+ PD     +++    +   +DEA+ L  EM  + ++
Sbjct: 311 GYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMI 369



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 116/246 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  DL     +I   C ++    +  + + + + G   N +   TL+      GE  +AL
Sbjct: 88  ITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKAL 147

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              D+++    ++  V++  LI+GLCK+G  +       ++    + P+V +Y  +I+ L
Sbjct: 148 YFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSL 207

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +  A +++ EM  + + PD   YT LI G+      KEA +L N M    ++ ++
Sbjct: 208 CKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNV 267

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +  L+  LS+ G ++EA++L   M+   I PD     SL+  ++    +  A  +   
Sbjct: 268 CTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYS 327

Query: 246 MMGRGL 251
           M  RG+
Sbjct: 328 MAQRGV 333



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 104/235 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  I+  L     +     L  + + NG+T +    + L++ +      + A S+   +L
Sbjct: 60  FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   +T   LI GLC  G +++A+ +  ++   G   +   Y  LI+GLCK    +
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L  ++    + PD   Y  +I+   K++   +A ++ + M   G+  D+  YT+L+
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 239

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            G    GHL+EA  L +EM  + I P+      L+    + G M EA  L   MM
Sbjct: 240 HGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 84/188 (44%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A++  + ML  R       F  ++  L  +      I  F +    G+ P++   + LI+
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             C +  I  A ++F  + KR   P+      LI G       K+AL   +++   G  L
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D  +Y +L+ GL + G  +    L  ++ G  + PD ++  +++    +   + +A ++ 
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 244 NEMMGRGL 251
           +EM+ +G+
Sbjct: 221 SEMIVKGI 228


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 149/286 (52%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I   + +Y  +I GLC ++K E+++ +   M+E G+  N     TLMD Y K   
Sbjct: 208 MRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLAN 267

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L  +ML   +   VVTF +LIDGLCK G ++ A + F  M  F + PN+AVY +
Sbjct: 268 AKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNS 327

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           LID                                   GLC  +  E A N+F++M K  
Sbjct: 328 LIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEG 387

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++ ++  Y +LIDG  K     +AL + ++MTE GV+ ++  +++L+ G  +  +LQ A 
Sbjct: 388 ILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAM 447

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++ EM+ + + PD +   +++  H + G+M EA++L ++M+  G+
Sbjct: 448 GIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGI 493



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 130/245 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ +  D+  +G +I GLC   + + ++ L   M +  +T N  +  +L+DAY K G+
Sbjct: 278 MLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGD 337

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA++L  E+    +   V T+ +LI GLC      EA + F +M   G+  N   Y +
Sbjct: 338 VSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNS 397

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +++A  +  +M +  + P+   ++ LIDGY K  + + A+ + + M    
Sbjct: 398 LIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKS 457

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  YT+++ G  + G ++EA  L+ +M+  GI P+      LL    + G + +A+
Sbjct: 458 LSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDAL 517

Query: 241 ELQNE 245
           EL  E
Sbjct: 518 ELFTE 522



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 123/240 (51%), Gaps = 13/240 (5%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y  +I GLC  S+ E++  +  +M + G+ AN+V   +L+D   K G+  +AL
Sbjct: 353 VSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKAL 412

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M ++ +E  V+TF  LIDG CK   ++ A+  +  M    L P+V  YTA+IDG 
Sbjct: 413 EICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGH 472

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV---D 182
           CK   ++ A  L+ +M    + P+    + L+DG  K     +AL L     E      +
Sbjct: 473 CKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCN 532

Query: 183 LDLN----------AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
           +D            AYT+L+ GL + G   +A  LF +M   G+ PDE++ + +L+  ++
Sbjct: 533 VDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQ 592



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 119/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +GT+I G C +     ++ +  EM+  G+    ++ T L+       +  EA S+   M 
Sbjct: 185 FGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMR 244

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   V T+  L+DG CK    ++A+  +  M   GL P+V  +  LIDGLCK   ++
Sbjct: 245 EVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMK 304

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            ARNLF  M K  + P+   Y +LID Y K     EA+ L   +    V  D+  Y+ L+
Sbjct: 305 AARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILI 364

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL      +EA  +F +M   GIL + +   SL+    + G MD+A+E+ ++M   G+
Sbjct: 365 RGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGV 423



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 15/252 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I A+   Y ++I G C E K + +  + S+M ENG+  N +  +TL+D Y K   
Sbjct: 383 MTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRN 442

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  EM+   +   VVT+  +IDG CK G ++EA+  +  M D G+ PN    + 
Sbjct: 443 LQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISC 502

Query: 121 LIDGLCKKNCIERARNLFDE-----MPK--------RDMIPDTTAYTALIDGYLKHESFK 167
           L+DGLCK   I  A  LF E      P+        +  + +  AYTALI G  +   F 
Sbjct: 503 LLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFS 562

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A+ L + M   G+  D   Y  ++ GL +  ++    +L  +M+  G++P+  + + L 
Sbjct: 563 KAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLKFGVIPNSAVHVILC 620

Query: 228 KKHYERGNMDEA 239
           + + E G +  A
Sbjct: 621 ECYQESGFLKSA 632



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 120/243 (49%), Gaps = 3/243 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K+ K    +YG +I  LC   K E  +  LS   + G       C  L+    K G    
Sbjct: 109 KSSKFTPNVYGELIIVLC---KMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFEL 165

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              + +EM+ + +  +V+TF  LIDG C+ G +  A + F  M   G+ P V VYT LI 
Sbjct: 166 LWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIR 225

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC  N IE A ++   M +  + P+   Y  L+DGY K  + K+AL L   M   G+  
Sbjct: 226 GLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVP 285

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  +  L+ GL + G ++ AR LF  MI   + P+  +  SL+  + + G++ EA+ L 
Sbjct: 286 DVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALF 345

Query: 244 NEM 246
            E+
Sbjct: 346 LEL 348



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 113/241 (46%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            +++ L    +FE    +  EM  NGL+ + +   TL+D   + G+   A  + DEM   
Sbjct: 152 VLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK 211

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            I  TV+ + +LI GLC    + EA      M + G++PNV  Y  L+DG CK    ++A
Sbjct: 212 GIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQA 271

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L+ +M    ++PD   +  LIDG  K    K A NL   M +  V  ++  Y SL+  
Sbjct: 272 LRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDA 331

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             + G + EA  LF E+    + PD      L++        +EA  +  +M   G+L+ 
Sbjct: 332 YCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILAN 391

Query: 255 S 255
           S
Sbjct: 392 S 392



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 15/188 (7%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K++  D+  Y  +I G C     +++  L S+M +NG+T N    + L+D   K G+ S+
Sbjct: 456 KSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISD 515

Query: 64  ALSLLDEMLD---SRIEVTV----------VTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           AL L  E ++    R  V            V +  LI GLC+ G   +A+  F  M  +G
Sbjct: 516 ALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYG 575

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           L P+  +Y  ++ GL +   I     L  +M K  +IP++  +  L + Y +    K A 
Sbjct: 576 LQPDEVIYVVMLRGLFQVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQ 633

Query: 171 NLKNRMTE 178
           N    + E
Sbjct: 634 NCSKDLEE 641



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 31/178 (17%)

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA-- 155
           +A+++F   P+     N+ +Y+A+I  L     +  AR L +++ + +++     Y A  
Sbjct: 45  KALEFFNAAPE----KNIQLYSAIIHVLVGSKLLSHARYLLNDLVQ-NLVKSHKPYHACQ 99

Query: 156 ---------------------LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
                                LI    K E  +EAL++ ++   VG  L + A   L++ 
Sbjct: 100 LAFSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYHK---VGAALTIQACNVLLYV 156

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           L + G  +    ++ EMI  G+ P  I   +L+     +G++  A E+ +EM  +G++
Sbjct: 157 LVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIV 214



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 5/153 (3%)

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           A     R+      PNV  Y  LI  LCK   +E A +++ ++     I    A   L+ 
Sbjct: 101 AFSELSRLKSSKFTPNV--YGELIIVLCKMELVEEALSMYHKVGAALTI---QACNVLLY 155

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
             +K   F+    +   M   G+   +  + +L+ G  R G L  A+ +F EM  +GI+P
Sbjct: 156 VLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVP 215

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             I+   L++       ++EA  +   M   G+
Sbjct: 216 TVIVYTILIRGLCSDNKIEEAESMHRAMREVGV 248


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 136/262 (51%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  + T+I G C   + +D   LL EM E GL ANT+  TTL+  + + G+
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDF 109
            + A  LL EM+ S +   VVT   L+DGLC +G +++A++ F  M           P  
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFN 471

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y ++I G  K     EA
Sbjct: 472 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             + + M       ++  +T+L+ G  + G + +   LF EM  RGI+ + I  I+L+  
Sbjct: 532 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHG 591

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ A+++  EMM  G+
Sbjct: 592 FRKVGNINGALDIFQEMMASGV 613



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 127/241 (52%), Gaps = 7/241 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVIC-----TTLMDAYFKAGEPSEALS 66
           YGTI+ G+C       +  LL +M+E + +  N VI      T +++ +  +G  SEA  
Sbjct: 217 YGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQ 276

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL EML+  +I   VVT+  LI+   K G   EA + +  M   G+ P+   Y+++IDG 
Sbjct: 277 LLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGF 336

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+N ++ A ++F  M  +   PD   +  LI GY + +   + + L + MTE G+  + 
Sbjct: 337 CKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANT 396

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+ G  + G L  A+ L  EM+  G+ P+ + C +LL    + G + +A+E+   
Sbjct: 397 ITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKA 456

Query: 246 M 246
           M
Sbjct: 457 M 457



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 127/250 (50%), Gaps = 11/250 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ GLC+E +  ++  L  +M       N V  TTLM+   + G   EA++LLD ML
Sbjct: 151 FSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRML 206

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVY-----TALIDGLC 126
           +  ++   +T+  ++DG+CK G    A++   +M +   + PNV ++     T +I+G C
Sbjct: 207 EDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFC 266

Query: 127 KKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
                  A+ L  EM +R  I PD   Y ALI+ ++K   F EA  L + M   G+    
Sbjct: 267 SSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPST 326

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+S++ G  +   L  A  +F+ M  +G  PD I   +L+  +     +D+ I+L +E
Sbjct: 327 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 386

Query: 246 MMGRGLLSGS 255
           M   GL++ +
Sbjct: 387 MTEAGLVANT 396



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 126/252 (50%), Gaps = 7/252 (2%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  + T++ GLC E +  ++  LL  M E+GL  N +   T++D   K G+   AL+
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 235

Query: 67  LLDEMLD-SRIEVTVVTF-----CVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYT 119
           LL +M + S I+  VV +       +I+G C SG   EA      M +   + P+V  Y 
Sbjct: 236 LLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYN 295

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ALI+   K+     A  L+DEM  R +IP T  Y+++IDG+ K      A ++   M   
Sbjct: 296 ALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATK 355

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  + +L+ G  R   + +   L HEM   G++ + I   +L+    + G+++ A
Sbjct: 356 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 415

Query: 240 IELQNEMMGRGL 251
            +L  EM+  G+
Sbjct: 416 QDLLQEMVSSGV 427



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 11/254 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C +++ + ++ +   M   G + + +   TL+  Y +A    + + LL EM 
Sbjct: 329 YSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 388

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ +    +T+  LI G C+ G +  A D    M   G+ PNV     L+DGLC    ++
Sbjct: 389 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLK 448

Query: 133 RARNLFDEMPKRDMI-----------PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            A  +F  M K  M            PD   Y  LI G +    F EA  L   M   G+
Sbjct: 449 DALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 508

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D   Y S++ GL +   L EA  +F  M  +   P+ +   +L+  + + G +D+ +E
Sbjct: 509 VPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 568

Query: 242 LQNEMMGRGLLSGS 255
           L  EM  RG+++ +
Sbjct: 569 LFCEMGRRGIVANA 582



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 11/254 (4%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  D+  Y  +I     E KF +++ L  EM   G+  +T+  ++++D + K      
Sbjct: 285 KKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDA 344

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +   M        ++TF  LI G C++  V + I     M + GL  N   YT LI 
Sbjct: 345 AEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 404

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV---- 179
           G C+   +  A++L  EM    + P+      L+DG   +   K+AL +   M +     
Sbjct: 405 GFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDI 464

Query: 180 -------GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
                  GV+ D+  Y  L+ GL   G   EA  L+ EM  RGI+PD I   S++    +
Sbjct: 465 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCK 524

Query: 233 RGNMDEAIELQNEM 246
           +  +DEA ++ + M
Sbjct: 525 QSRLDEATQMFDSM 538



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 110/268 (41%), Gaps = 38/268 (14%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
            ED+  L  +M  +    + +    LM    + G     +SL  +M   R+     +F +
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+   C    +  A+  FG++   G HP V  ++ L+ GLC ++ I  A +LF +M K +
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPN 178

Query: 146 MI-------------------------------PDTTAYTALIDGYLKHESFKEALNLKN 174
           ++                               P+   Y  ++DG  K      ALNL  
Sbjct: 179 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 238

Query: 175 RMTEVG------VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLL 227
           +M EV       V   L   T ++ G    G   EA+ L  EM+ R  I PD +   +L+
Sbjct: 239 KMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALI 298

Query: 228 KKHYERGNMDEAIELQNEMMGRGLLSGS 255
               + G   EA EL +EM+ RG++  +
Sbjct: 299 NAFVKEGKFFEAEELYDEMLPRGIIPST 326


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 135/259 (52%), Gaps = 11/259 (4%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K    D+  + T+I G C   + +D   LL EM E GL ANT+  TTL+  + + G+ + 
Sbjct: 387 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 446

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDFGLH 112
           A  LL EM+ S +   VVT   L+DGLC +G +++A++ F  M           P  G+ 
Sbjct: 447 AQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVE 506

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y+++IDG  K     EA  +
Sbjct: 507 PDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQM 566

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            + M       D+  + +L+ G  + G + +   LF EM  RGI+ D I  I+L+    +
Sbjct: 567 FDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRK 626

Query: 233 RGNMDEAIELQNEMMGRGL 251
             N+D A+++  EM+  G+
Sbjct: 627 VDNIDGALDIFQEMISSGV 645



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 128/243 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            +I  ++ +Y TII GL  + +  D+  L  EM+E  +  + V    +++ +  +G  S+
Sbjct: 247 SHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSD 306

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EML+ +I   VVTF  LI+   K G   EA + +  M    + P+   Y+++ID
Sbjct: 307 AEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMID 366

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK+N ++ A ++F   P +   PD   +  LI GY + +   + + L + MTE G+  
Sbjct: 367 GFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVA 426

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   YT+L+ G  + G L  A+ L  EMI  G+ P+ + C +LL    + G + +A+E+ 
Sbjct: 427 NTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMF 486

Query: 244 NEM 246
             M
Sbjct: 487 KAM 489



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 46/292 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  D+  Y  +I G CI  ++ D++ LL EM E  +  + V  + L++A+ K G+
Sbjct: 279 MQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGK 338

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I  + VT+  +IDG CK   +  A   F   P  G  P++  +  
Sbjct: 339 FFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNT 398

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK------------------ 162
           LI G C+   ++    L  EM +  ++ +T  YT LI G+ +                  
Sbjct: 399 LIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSG 458

Query: 163 -----------------HESFKEALNLKNRMTEV-----------GVDLDLNAYTSLVWG 194
                            +   K+AL +   M +            GV+ D+  Y  L+ G
Sbjct: 459 VCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICG 518

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L   G   EA  L+ EM  RGI+PD I   S++    ++  +DEA ++ + M
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 570



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 126/250 (50%), Gaps = 1/250 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  + T++ GLC E +  ++  LL  M E+GL  N +   T++D   K G+   AL+
Sbjct: 179 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I   VV +  +IDGL K G   +A + F  M +  + P++  Y  +I+G 
Sbjct: 239 LLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGF 298

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  L  EM +R + PD   ++ALI+ ++K   F EA  L + M    +    
Sbjct: 299 CISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPST 358

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+S++ G  +   L  A  +F+    +G  PD I   +L+  +     +D+ I+L +E
Sbjct: 359 VTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHE 418

Query: 246 MMGRGLLSGS 255
           M   GL++ +
Sbjct: 419 MTEAGLVANT 428



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 11/264 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I      Y ++I G C +++ + ++ +       G + + +   TL+  Y +A  
Sbjct: 349 MLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKR 408

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL EM ++ +    +T+  LI G C+ G +  A D    M   G+ PNV     
Sbjct: 409 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNT 468

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-----------PDTTAYTALIDGYLKHESFKEA 169
           L+DGLC    ++ A  +F  M K  M            PD   Y  LI G +    F EA
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEA 528

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M   G+  D   Y+S++ GL +   L EA  +F  M  +   PD +   +L+  
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITG 588

Query: 230 HYERGNMDEAIELQNEMMGRGLLS 253
           + + G +D+ +EL  EM  RG+++
Sbjct: 589 YCKAGMVDDGLELFCEMGQRGIVA 612



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 102/247 (41%), Gaps = 32/247 (12%)

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLI------------- 87
           +  N    T LM  +    +   ALS   ++       TVVTF  L+             
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 88  ------------------DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
                             +GLC+ G V EA+    RM + GL PN   Y  ++DG+CK  
Sbjct: 172 DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 231

Query: 130 CIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
               A NL  +M +   +IP+   Y  +IDG  K     +A NL   M E  +  D+  Y
Sbjct: 232 DTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTY 291

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             ++ G    G   +A  L  EM+ R I PD +   +L+    + G   EA EL +EM+ 
Sbjct: 292 NCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLP 351

Query: 249 RGLLSGS 255
           R ++  +
Sbjct: 352 RSIIPST 358



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 5/197 (2%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           LM    + G P   +SL  +M   R+     +F +L+   C    +  A+  FG++   G
Sbjct: 87  LMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLG 146

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
            HP V  +  L+ GLC ++ I  A +LF +M K    P+   +T L++G  +     EA+
Sbjct: 147 FHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAV 202

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG-RGILPDEILCISLLKK 229
            L +RM E G+  +   Y ++V G+ + G    A  L  +M     I+P+ ++  +++  
Sbjct: 203 ALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDG 262

Query: 230 HYERGNMDEAIELQNEM 246
            ++ G   +A  L  EM
Sbjct: 263 LWKDGRHSDAHNLFIEM 279



 Score = 40.8 bits (94), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 4/154 (2%)

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +AID FG M      P+V  +  L+  + +    +   +L  +M    M  +  ++T L+
Sbjct: 64  DAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILM 123

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
             +        AL+   ++T++G    +  + +L+ GL     + EA  LFH+M      
Sbjct: 124 KCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK---- 179

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P+ +   +L+      G + EA+ L + M+  GL
Sbjct: 180 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGL 213


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/244 (36%), Positives = 132/244 (54%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G N K  +  Y  II GLC   + +++K L  EMK  G+  + +  +TL+  +  AG+  
Sbjct: 230 GVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWD 289

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           ++  L DEM+D  ++  +VTF VLID LCK G V EA      M   G+ PN+  Y +LI
Sbjct: 290 QSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLI 349

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C    +  AR LF  MP + + PD  +YT LI+GY K    KEA+NL N M +VG  
Sbjct: 350 DGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKS 409

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL + G + +A+ LF  M   G+  +  +    L    +   + EA+EL
Sbjct: 410 PNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMEL 469

Query: 243 QNEM 246
            NE+
Sbjct: 470 FNEL 473



 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 128/244 (52%), Gaps = 6/244 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC+E +  ++  L   M++ G T N V   TL+    + G  + AL L  EML
Sbjct: 164 YTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEML 223

Query: 73  D--SRIEVT----VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +  S+  V     V+T+ ++IDGLCK G   EA + F  M   G+ P+V  Y+ LI G C
Sbjct: 224 NDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFC 283

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +++++LFDEM  + + PD   ++ LID   K     EA  L   M + G+  +L 
Sbjct: 284 CAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLI 343

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y SL+ G    G L  AR LF  M  +G+ PDEI   +L+  + +   + EA+ L NEM
Sbjct: 344 TYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEM 403

Query: 247 MGRG 250
           +  G
Sbjct: 404 LQVG 407



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 125/249 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +L  Y ++I G C+      ++ L   M   GL  + +  TTL++ Y K  +
Sbjct: 333 MIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWK 392

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L +EML       V T+  L+ GL + G V +A   FG M  +G+  N  +Y  
Sbjct: 393 VKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGI 452

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +DGLCK +C+  A  LF+E+   +   +   Y+ LIDG  K    + A  L  ++++ G
Sbjct: 453 FLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEG 512

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  ++ G  + G +  A +LF +M   G  PD I   +LL    E   ++E I
Sbjct: 513 LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVI 572

Query: 241 ELQNEMMGR 249
           +L ++M+ +
Sbjct: 573 KLLHKMVQK 581



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 130/285 (45%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  D+  Y T+I G C   K++ SK L  EM + G+  + V  + L+D   K G+
Sbjct: 263 MKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGK 322

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  LL+ M+   I   ++T+  LIDG C  G +  A + F  MP  GL P+   YT 
Sbjct: 323 VTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTT 382

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL------------------------ 156
           LI+G CK   ++ A NL++EM +    P+ T Y  L                        
Sbjct: 383 LINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYG 442

Query: 157 -----------IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                      +DG  K++   EA+ L N +      L++  Y+ L+ GL + G L+ A 
Sbjct: 443 VSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAW 502

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            LF ++   G+ PD +    ++    + G +D A  L  +M   G
Sbjct: 503 ELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 108/223 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y T+I G C   K +++  L +EM + G + N     TL+   F+ G+
Sbjct: 368 MPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGK 427

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L   M    +      + + +DGLCK+  + EA++ F  +  +    N+  Y+ 
Sbjct: 428 VGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSC 487

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  LF+++ +  + PD   Y  +I G+ K      A  L  +M E G
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
              D+ AY +L+ G      L+E   L H+M+ + + P+   C
Sbjct: 548 CTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASC 590



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 41/280 (14%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++ GL   + +     L +EM+  GL+ +    + L +        SEAL+ +  +L
Sbjct: 94  FNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGIL 153

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------------------ 114
                  VVT+  LI GLC    + EA   F RM   G  PN                  
Sbjct: 154 RRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVN 213

Query: 115 -----------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                                  V  Y+ +IDGLCK    + A+ LF+EM  + MIPD  
Sbjct: 214 IALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVI 273

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +Y+ LI G+     + ++ +L + M + GV  D+  ++ L+  L + G + EA+ L   M
Sbjct: 274 SYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVM 333

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I RGI+P+ I   SL+      G+++ A EL   M  +GL
Sbjct: 334 IQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGL 373



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 94/180 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT++ GL  + K  D+K L   MK  G++AN+ I    +D   K     EA+ L +E+ 
Sbjct: 415 YGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELK 474

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               ++ +  +  LIDGLCK+G +  A + F ++   GL P+V  Y  +I G CK   ++
Sbjct: 475 SYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVD 534

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF++M +    PD  AY  L+ G+ +    +E + L ++M +  V  +  + T +V
Sbjct: 535 NANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 87/172 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   + A+  +YG  + GLC      ++  L +E+K      N    + L+D   KAG+
Sbjct: 438 MKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L +++    ++  VVT+ ++I G CK G V  A   F +M + G  P++  Y  
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           L+ G C+ N +E    L  +M ++D+ P+  + T ++D   K E +K+ ++L
Sbjct: 558 LLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDL 609



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 6/196 (3%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A    D M+ S     + +F  L+ GL K     +    +  M   GL P++   + L 
Sbjct: 74  QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC  N +  A      + +R  IP+   YT LI G        EA  L  RM ++G  
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMI------GRGILPDEILCISLLKKHYERGNM 236
            +   Y +L+ GL + G++  A  L  EM+      G    P  I    ++    + G  
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253

Query: 237 DEAIELQNEMMGRGLL 252
           DEA EL  EM  +G++
Sbjct: 254 DEAKELFEEMKAQGMI 269



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 3/143 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K  N K ++  Y  +I GLC   K E +  L  ++ + GL  + V    ++  + K G+
Sbjct: 473 LKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQ 532

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L ++M ++     ++ +  L+ G C+   + E I    +M    + PN A  T 
Sbjct: 533 VDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTI 592

Query: 121 LIDGLCKKNCIERARNLFDEMPK 143
           ++D LCK    E+ +   D +PK
Sbjct: 593 VVDMLCKD---EKYKKFVDLLPK 612



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/102 (22%), Positives = 52/102 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  Y  +I G C   + +++ +L  +M+ENG T + +   TL+  + +  +  E +
Sbjct: 513 LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVI 572

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
            LL +M+   +     +  +++D LCK    ++ +D   + P
Sbjct: 573 KLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFP 614


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  146 bits (368), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y ++I  LC E    D++ L   MKE G+  N      LM  + +  +
Sbjct: 204 MVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDD 263

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L  E+L+S +    V F  LIDG CK+    EA D F  MP FG+ P V VY +
Sbjct: 264 VNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNS 323

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
           L+DG  +    + A +L+ EM +  + PD                               
Sbjct: 324 LMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDG 383

Query: 150 ----TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                 AY ALID Y ++ + +EAL    RMTEVGV+ ++ +Y+SL+ G S+ G +Q A 
Sbjct: 384 VNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAM 443

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++ EM+ +GI P+ +   +L+  H + G +D A     EM+  G+
Sbjct: 444 AIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGI 489



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 114/230 (49%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           LP    ++ GL    +   +  L  EM   G+  + V   TL++A    G  ++A  + D
Sbjct: 143 LPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWD 202

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           +M+  +I+  V+T+  +I  LC+ G + +A   F  M + G+ PN   Y  L+ G C+ +
Sbjct: 203 QMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGD 262

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +  A  L+ E+    +IP+   +T LIDG+ K + F EA ++   M   GV   +  Y 
Sbjct: 263 DVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYN 322

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           SL+ G  R G  QEA  L+ EM   G+ PDE  C  +++   + G +  A
Sbjct: 323 SLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVA 372



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 116/237 (48%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++ T+I G C   +F ++K +  +M   G+     +  +LMD  F++G+  EALSL  EM
Sbjct: 285 VFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEM 344

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               +     T  +++ GLC  G ++ A  +   + + G++ N A Y ALID  C+   +
Sbjct: 345 TRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNL 404

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A      M +  + P+  +Y++LIDG+ K    + A+ +   M   G++ ++  YT+L
Sbjct: 405 EEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTAL 464

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + G ++ G +  A     EMI  GI P+ I    L+        + +A+    E  G
Sbjct: 465 IHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSG 521



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 98/204 (48%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  ++D   KA     A  L DEML   +  +VVT+  LI+     G V +A + + +M 
Sbjct: 146 CNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMV 205

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
              + PNV  YT++I  LC++ CI  A  LFD M +  M P+   Y  L+ G+ + +   
Sbjct: 206 ARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVN 265

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A  L   +   G+  +   +T+L+ G  +     EA+ +F +M   G+ P   +  SL+
Sbjct: 266 SAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLM 325

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
              +  G+  EA+ L  EM   GL
Sbjct: 326 DGAFRSGDAQEALSLYQEMTRLGL 349



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 3/171 (1%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VL+  L + GL+ EA+  F R+      P +    A++DGL K      A  LFDEM +R
Sbjct: 116 VLVIALSQMGLLDEALYVFRRLWTL---PALPACNAVLDGLVKARRSRCAWELFDEMLRR 172

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            M+P    Y  LI+      +  +A  + ++M    +D ++  YTS++  L   G + +A
Sbjct: 173 GMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDA 232

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             LF  M   G+ P++     L+  H +  +++ A  L  E++  GL+  +
Sbjct: 233 ERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNA 283



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 17/193 (8%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++  Y ++I G     K + +  + +EM   G+  N V  T L+  + K G    A 
Sbjct: 419 VEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAF 478

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY--------FGRMPDF-------- 109
               EM+++ I    +T  VL+DGLC+   V++A+ +        +  +  F        
Sbjct: 479 RFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEE 538

Query: 110 -GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
             L PN A+Y  LI GL        A  LF  M K  MI D+  YT LI G         
Sbjct: 539 EPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLN 598

Query: 169 ALNLKNRMTEVGV 181
           A+ L   M ++GV
Sbjct: 599 AMMLYADMMKIGV 611


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 136/250 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I AD+  Y T+I+G CIE K +++  LL+EM    +  N      L+DA  K G+
Sbjct: 225 MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S+L  ML + ++  V+T+  L+DG      V++A   F  M   G+ P+V  YT 
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A NLF EM +++M+P    Y++LIDG  K        +L + M + G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG 404

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y+SL+ GL + GHL  A  LF++M  +GI P+      LL    + G + +A 
Sbjct: 405 QPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 464

Query: 241 ELQNEMMGRG 250
           E+  +++ +G
Sbjct: 465 EVFQDLLTKG 474



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 123/235 (52%), Gaps = 4/235 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T++ G  +  + + ++ + + M   G+T +    T L++ + K     EAL
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM    +   +VT+  LIDGLCKSG +    D    M D G   NV  Y++LIDGL
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGL 419

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   ++RA  LF++M  + + P+T  +T L+DG  K    K+A  +   +   G  L++
Sbjct: 420 CKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNM 236
             Y  ++ G  + G L+EA  +  +M   G +PD    EI+ I+L KK    GN+
Sbjct: 480 YTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGGNV 534



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 121/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I G+C       +  LL ++       N V+ +T++DA  K    SEA  L  EM 
Sbjct: 167 YGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMT 226

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G C  G ++EAI     M    ++PNV  Y  L+D LCK+  ++
Sbjct: 227 VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+++   M K  + PD   Y+ L+DGY      K+A ++ N M+ +GV  D++ YT L+
Sbjct: 287 EAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + EA  LF EM  + ++P  +   SL+    + G +    +L +EM  RG
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRG 404



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 116/243 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ DL     +I   C   +      +L+++ + G   +TV   TL+      G+  +
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL   D++L    ++  V++  LI+G+CK G  R AI    ++      PNV +Y+ +ID
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIID 207

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK   +  A  LF EM  + +  D   Y+ LI G+      KEA+ L N M    ++ 
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y  LV  L + G ++EA+ +   M+   + PD I   +L+  ++    + +A  + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 244 NEM 246
           N M
Sbjct: 328 NAM 330



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 123/251 (49%), Gaps = 2/251 (0%)

Query: 4    KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            K I+ DL     +I   C   +   +  +L+++ + G   +T+  TTL++     G+ ++
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 64   ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            AL   D++L    ++  V++  LI+G+CK G  R AI    ++      P+V +Y  +ID
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 124  GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             LCK   + +A  LF EM  + +  D   Y  LI G+      KEA+ L N+M    ++ 
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 184  DLNAYTSLVWGLSRCGH--LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            ++  Y  LV  L + G   L E+  +  +M   G   + +    ++   +E+   D+  +
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 242  LQNEMMGRGLL 252
            L +EM+ RGLL
Sbjct: 1195 LLHEMIARGLL 1205



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+   +  Y ++I GLC   +      L+ EM + G  AN +  ++L+D   K G 
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGH 424

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A++L ++M D  I     TF +L+DGLCK G +++A + F  +   G H NV  Y  
Sbjct: 425 LDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
           +IDG CK+  +E A  +  +M     IPD   +  +I    K +
Sbjct: 485 MIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKD 528



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 2/149 (1%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            + G+  K D+ +Y TII  LC       +  L  EM   G++A+ V   TL+  +   G+
Sbjct: 1057 IDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGK 1116

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG--LVREAIDYFGRMPDFGLHPNVAVY 118
              EA+ LL++M+   I   V T+ +L+D LCK G  L+ E++    +M D G   N   +
Sbjct: 1117 LKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTF 1176

Query: 119  TALIDGLCKKNCIERARNLFDEMPKRDMI 147
              +I  L +K+  ++   L  EM  R ++
Sbjct: 1177 EIIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 92/197 (46%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++D++ K    S A+SL   +    I+  ++T  +LI+  C  G +        ++   G
Sbjct: 65  ILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+      LI GLC K  +++A +  D++  +    +  +Y  LI+G  K    + A+
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAI 184

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L  ++       ++  Y++++  L +   + EA  LF EM  +GI  D +   +L+   
Sbjct: 185 KLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244

Query: 231 YERGNMDEAIELQNEMM 247
              G + EAI L NEM+
Sbjct: 245 CIEGKLKEAIGLLNEMV 261



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 87/186 (46%)

Query: 62   SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            S A+SL   +    I+  + T  +LI+  C  G +        ++   G HP+   +T L
Sbjct: 943  STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTL 1002

Query: 122  IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            I+GLC K  + +A +  D++  +    +  +Y  LI+G  K    + A+ L  ++     
Sbjct: 1003 INGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLT 1062

Query: 182  DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
              D+  Y +++  L +   + +A  LF EM  +GI  D +   +L+      G + EAI 
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIG 1122

Query: 242  LQNEMM 247
            L N+M+
Sbjct: 1123 LLNKMV 1128



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 72/153 (47%)

Query: 99   AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
            A+    R+   G+ P++     LI+  C    I    ++  ++ KR   PDT  +T LI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 159  GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
            G        +AL+  +++   G  L+  +Y +L+ G+ + G  + A  L  ++ GR   P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 219  DEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            D ++  +++    +   + +A  L  EM  +G+
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGI 1097



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 23/121 (19%), Positives = 56/121 (46%)

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           ++ A + F+ M      P    +  ++D + K + +  A++L +R+   G+  DL     
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+      G +     +  +++ RG  PD +   +L+K    +G + +A+   ++++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 251 L 251
            
Sbjct: 160 F 160


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  146 bits (368), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 134/251 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N + D+ +YGT+I  LC + +   +  L SEM   G++ N V C +L+ A    GE
Sbjct: 205 MEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGE 264

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL+EM+DS+I    ++   ++D LCK G+V +A D    M   G+ P+V  YTA
Sbjct: 265 WKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTA 324

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C ++ ++ A  +FD M  +   P+  +Y  LI+GY K E   +A+ L   M    
Sbjct: 325 LIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQK 384

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +L+ GL   G LQ+A  LF EM+  G +PD +    LL    +  ++D+A+
Sbjct: 385 LIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAM 444

Query: 241 ELQNEMMGRGL 251
            L   + G  L
Sbjct: 445 ALLKAIEGSNL 455



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++    ++++ LC   +++    LL+EM ++ +  N +  TT++DA  K G 
Sbjct: 240 MITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGM 299

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  ++D M  S +E  VVT+  LIDG C    + EA+  F  M   G  PNV  Y  
Sbjct: 300 VAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNT 359

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +++A  LF+EM ++ +IP+T  Y  LI G       ++A+ L   M   G
Sbjct: 360 LINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACG 419

Query: 181 -----------------------------------VDLDLNAYTSLVWGLSRCGHLQEAR 205
                                              +D D+  YT ++ G+ R G L++AR
Sbjct: 420 QIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDAR 479

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            LF  +  +G+ P+      +     +RG +DEA +L  EM
Sbjct: 480 DLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEM 520



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 120/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + D+ +Y T+I GLC       +  LL  M++     + V+  TL+ +  K  +
Sbjct: 170 MIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQ 229

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A +L  EM+   I   +VT   L+  LC  G  +        M D  + PN    T 
Sbjct: 230 QTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTT 289

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D LCK+  + +A ++ D M +  + PD   YTALIDG+       EA+ + + M   G
Sbjct: 290 VVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKG 349

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++ +Y +L+ G  +   + +A  LF EM  + ++P+ +   +L+      G + +AI
Sbjct: 350 CAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAI 409

Query: 241 ELQNEMMGRG 250
            L  EM+  G
Sbjct: 410 ALFREMVACG 419



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 117/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I G C+ S+ +++  +   M   G   N     TL++ Y K   
Sbjct: 310 MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIER 369

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EM   ++    VT+  LI GLC  G +++AI  F  M   G  P++  Y  
Sbjct: 370 MDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRI 429

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK   +++A  L   +   ++ PD   YT +IDG  +    ++A +L + ++  G
Sbjct: 430 LLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKG 489

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y  +  GL + G L EA  LF EM       D     ++ +          AI
Sbjct: 490 LKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAI 549

Query: 241 ELQNEMMGRGL 251
           +L  EM+ RG 
Sbjct: 550 QLLEEMLARGF 560



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 116/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  ++     +I   C  ++   +  +L+++ + G   +T   TTL+      G+
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L D+M+    +  VV +  LI+GLCK+G    AI     M      P+V VY  
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK     +A NLF EM  + + P+     +L+        +K    L N M +  
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +  + T++V  L + G + +A  +   M   G+ PD +   +L+  H  R  MDEA+
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAV 339

Query: 241 ELQNEMMGRG 250
           ++ + M+ +G
Sbjct: 340 KVFDMMVHKG 349



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 106/239 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  I+  +    ++     L  +M   G+  N      L++++      + A S+L ++L
Sbjct: 77  FAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKIL 136

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +    +F  LI GLC  G + EA+  F +M   G  P+V +Y  LI+GLCK     
Sbjct: 137 KLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTS 196

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M K +  PD   Y  LI    K     +A NL + M   G+  ++    SLV
Sbjct: 197 AAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLV 256

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + L   G  +    L +EM+   I+P+ I   +++    + G + +A ++ + M   G+
Sbjct: 257 YALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGV 315



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 91/187 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC   + +D+  L  EM   G   + V    L+D   K     +A++LL  + 
Sbjct: 392 YNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIE 451

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S ++  +  + ++IDG+C++G + +A D F  +   GL PNV  Y  +  GLCK+  ++
Sbjct: 452 GSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLD 511

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM +     D   Y  +  G+L++     A+ L   M   G   D++  T LV
Sbjct: 512 EATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLV 571

Query: 193 WGLSRCG 199
             LS  G
Sbjct: 572 GMLSDDG 578



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 94/207 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + + +  L  EM    L  NTV   TL+      G   +A++L  EM+
Sbjct: 357 YNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMV 416

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+ +L+D LCK+  + +A+     +    L P++ +YT +IDG+C+   +E
Sbjct: 417 ACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELE 476

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR+LF  +  + + P+   Y  +  G  K     EA  L   M E     D   Y ++ 
Sbjct: 477 DARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTIT 536

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
            G  R      A  L  EM+ RG   D
Sbjct: 537 QGFLRNNETSRAIQLLEEMLARGFSCD 563



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 86/197 (43%)

Query: 55  YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
           Y       +ALS  + ML      ++V F  ++  + K       +    +M  FG+  N
Sbjct: 49  YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           V     LI+  C  N +  A ++  ++ K    PDT ++T LI G        EAL+L +
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
           +M   G   D+  Y +L+ GL + GH   A  L   M      PD ++  +L+    +  
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228

Query: 235 NMDEAIELQNEMMGRGL 251
              +A  L +EM+ +G+
Sbjct: 229 QQTQAFNLFSEMITKGI 245



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 72/164 (43%), Gaps = 5/164 (3%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL  Y  ++  LC     + +  LL  ++ + L  +  I T ++D   +AGE  +A  L 
Sbjct: 423 DLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLF 482

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    ++  V T+ ++  GLCK GL+ EA   F  M +     +   Y  +  G  + 
Sbjct: 483 SNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRN 542

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALI-----DGYLKHESFK 167
           N   RA  L +EM  R    D +  T L+     DG  + E+ K
Sbjct: 543 NETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHK 586


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 136/291 (46%), Gaps = 35/291 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     D+  Y T++ GLC + +  D++ LL+EMKE G+T +    TTL+  Y + G 
Sbjct: 358 MVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGN 417

Query: 61  PSEALSLLDEMLDSRIEVTVV-----------------------------------TFCV 85
             +AL L D +L  R+   VV                                   T+ +
Sbjct: 418 FEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSI 477

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LID  C+ G V EA  +   M   G  PN+  Y ++I G C+   +++ +    +M + +
Sbjct: 478 LIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDN 537

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++PD   +  LI GY+K E+   A N+ N M +  V  D   Y  ++ G S  G+++EA 
Sbjct: 538 ILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAG 597

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
            +F +M   GI PD    +SL+  H   GN  EA +L +EMM RG     K
Sbjct: 598 RVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 131/248 (52%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  +  +I G C   + E++     EM++ G+T + V  + L+  +   G+   A
Sbjct: 257 SVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHA 316

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
            + L EM    +    V + ++I G C++G + EA+     M   G  P+V  Y  L++G
Sbjct: 317 AAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNG 376

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK++ +  A  L +EM +R + PD   +T LI GY +  +F++AL L + +    +  D
Sbjct: 377 LCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           + AY SL+ G+ R G L +A  L+ +M  R I P+ +    L+  H E+G ++EA    +
Sbjct: 437 VVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLD 496

Query: 245 EMMGRGLL 252
           EM+ +G L
Sbjct: 497 EMVSKGNL 504



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K  +  + +++ GLC   +F+ +K +   M +  +  +      L+  + + GE
Sbjct: 218 MANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGE 277

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+    EM    +   VV+F  LI      G +  A  Y   M   GL P+  +YT 
Sbjct: 278 VEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTM 337

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   +  A  + DEM     +PD   Y  L++G  K     +A  L N M E G
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERG 397

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  DL  +T+L+ G  R G+ ++A  LF  ++ + + PD +   SL+     +G++ +A 
Sbjct: 398 VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKAN 457

Query: 241 ELQNEMMGRGLL 252
           EL ++M  R + 
Sbjct: 458 ELWDDMHAREIF 469



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 120/246 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG  +  D  +Y  +I G C      ++  +  EM   G   + V   TL++   K   
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHR 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL+EM +  +   + TF  LI G C+ G   +A+  F  +    L P+V  Y +
Sbjct: 383 LLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNS 442

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG+C+K  + +A  L+D+M  R++ P+   Y+ LID + +    +EA    + M   G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKG 502

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y S++ G  R G++++ +    +M+   ILPD I   +L+  + +  NM  A 
Sbjct: 503 NLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAF 562

Query: 241 ELQNEM 246
            + N M
Sbjct: 563 NVFNIM 568



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 120/236 (50%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++   C   +F+ +  ++SEM++  +  + V    L+DA F+AG+   A++L+D M +  
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKG 222

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++  +VTF  ++ GLCK     +A + F  M    + P+V  +  LI G C+   +E A 
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
             + EM +R + PD  +++ LI  +        A      M  +G+  D   YT ++ G 
Sbjct: 283 KFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGF 342

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            R G + EA  +  EM+G G LPD +   +LL    ++  + +A EL NEM  RG+
Sbjct: 343 CRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 114/226 (50%), Gaps = 4/226 (1%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E  +L+LS   E     N      ++ +Y K+ E  +A +++ EM    +   VVT  VL
Sbjct: 143 EAYRLVLSSDSE----VNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVL 198

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           ID   ++G V  AI     M + GL P +  + +++ GLCK    ++A+ +F  M +  +
Sbjct: 199 IDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSV 258

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            PD  ++  LI G+ +    +EA+     M + GV  D+ +++ L+   S  G +  A  
Sbjct: 259 APDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAA 318

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              EM G G++PD ++   ++      G+M EA+ +++EM+G G L
Sbjct: 319 YLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCL 364



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 87/196 (44%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           +AG P  A      +L S  EV   T  +++   CKS    +A      M    + P+V 
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +  LID   +   ++ A  L D M  + + P    + +++ G  KH  F +A  +   M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            +  V  D+ ++  L+ G  R G ++EA   + EM  RG+ PD +    L+     RG M
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313

Query: 237 DEAIELQNEMMGRGLL 252
           D A     EM G GL+
Sbjct: 314 DHAAAYLREMKGLGLV 329



 Score = 38.5 bits (88), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 182 DLDLNAYTSLVWGLSRCGHLQ--EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           D ++NAYT  +   S C  L+  +A  +  EM  R + PD +    L+   +  G++D A
Sbjct: 152 DSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAA 211

Query: 240 IELQNEMMGRGLLSG 254
           I L + M  +GL  G
Sbjct: 212 IALVDSMANKGLKPG 226


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  146 bits (368), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 130/243 (53%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC +     ++ L++EM+  G   N +  T L+D + K G   EA ++L
Sbjct: 406 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 465

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM    + +  V +  LI  LCK   V++A++ FG M   G  P++  + +LI GLCK 
Sbjct: 466 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 525

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N  E A  L+ +M    +I +T  Y  LI  +L+  + +EAL L N M   G  LD   Y
Sbjct: 526 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 585

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+  L R G++++   LF +M+ +G+ P+ I C  L+      GN+  A+E   +M+ 
Sbjct: 586 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 645

Query: 249 RGL 251
           RGL
Sbjct: 646 RGL 648



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 127/239 (53%), Gaps = 5/239 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE-M 71
           YG ++ GLC   K +++++LL+++       N V+  TL++ Y   G   EA +++ E M
Sbjct: 343 YGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESM 398

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L       + T+  LI GLCK G +  A +    M   G  PNV  YT LID  CK+  +
Sbjct: 399 LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 458

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E ARN+ DEM  + +  +   Y  LI    K E  ++ALN+   M+  G   D+  + SL
Sbjct: 459 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 518

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++GL +    +EA  L+ +M+  G++ + I   +L+     RG M EA++L N+M+ RG
Sbjct: 519 IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577



 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 123/237 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  + ++I+GLC  +KFE++  L  +M   G+ ANT+   TL+ A+ + G 
Sbjct: 503 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 562

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L+++ML     +  +T+  LI  LC++G + + +  F  M   GL+PN      
Sbjct: 563 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 622

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC+   I+ A     +M  R + PD   Y +LI+G  K    +EALNL +++   G
Sbjct: 623 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 682

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           +  D   Y +L+    + G   +A +L    +  G +P+E+    L+    + G+ +
Sbjct: 683 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 126/252 (50%), Gaps = 5/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   +  +G ++  LC+ ++ + +  LL +M  +G   N ++  TL+ A  K G 
Sbjct: 226 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGR 285

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +E L LL+EML       V TF   I GLCK   + EA     RM   G  PN   Y  
Sbjct: 286 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 345

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA-LNLKNRMTEV 179
           L+ GLC+   ++ AR L +++P     P+   +  LI+GY+      EA   +   M  V
Sbjct: 346 LMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 401

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  Y +L+ GL + G+L  AR L +EM  +G  P+ I    L+ +  + G ++EA
Sbjct: 402 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 461

Query: 240 IELQNEMMGRGL 251
             + +EM G+GL
Sbjct: 462 RNVLDEMSGKGL 473



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 4/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  +   Y  +I  LC + K +D+  +  +M   G   +     +L+    K  +
Sbjct: 468 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 527

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L  +ML   +    +T+  LI    + G ++EA+     M   G   +   Y  
Sbjct: 528 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 587

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC+   IE+   LF++M  + + P+  +   LI+G  +  + + AL     M   G
Sbjct: 588 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 647

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y SL+ GL + G  QEA  LF ++   GI PD I   +L+  H + G  D+A 
Sbjct: 648 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA- 706

Query: 241 ELQNEMMGRGLLSG 254
              + ++ RG+ SG
Sbjct: 707 ---HLLLSRGVDSG 717



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 108/272 (39%), Gaps = 40/272 (14%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL--- 68
           +Y  +I  L    +F+ +  LL +MK+ G+     +   +M  Y +AG P +A  LL   
Sbjct: 131 VYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 190

Query: 69  ---------------------------------DEMLDSRIEVTVVTFCVLIDGLCKSGL 95
                                             EML   I  TV TF V++  LC    
Sbjct: 191 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 250

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           V  A      M   G  PN  VY  LI  L K   +     L +EM     IPD   +  
Sbjct: 251 VDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFND 310

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
            I G  K     EA  L +RM   G   +   Y  L+ GL R G + EAR+L +++    
Sbjct: 311 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-- 368

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             P+ +L  +L+  +  RG +DEA  + +E M
Sbjct: 369 --PNVVLFNTLINGYVSRGRLDEAKAVMHESM 398


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 130/243 (53%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC +     ++ L++EM+  G   N +  T L+D + K G   EA ++L
Sbjct: 388 DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVL 447

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM    + +  V +  LI  LCK   V++A++ FG M   G  P++  + +LI GLCK 
Sbjct: 448 DEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV 507

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N  E A  L+ +M    +I +T  Y  LI  +L+  + +EAL L N M   G  LD   Y
Sbjct: 508 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 567

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+  L R G++++   LF +M+ +G+ P+ I C  L+      GN+  A+E   +M+ 
Sbjct: 568 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 627

Query: 249 RGL 251
           RGL
Sbjct: 628 RGL 630



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 127/239 (53%), Gaps = 5/239 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE-M 71
           YG ++ GLC   K +++++LL+++       N V+  TL++ Y   G   EA +++ E M
Sbjct: 325 YGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESM 380

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L       + T+  LI GLCK G +  A +    M   G  PNV  YT LID  CK+  +
Sbjct: 381 LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 440

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E ARN+ DEM  + +  +   Y  LI    K E  ++ALN+   M+  G   D+  + SL
Sbjct: 441 EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 500

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++GL +    +EA  L+ +M+  G++ + I   +L+     RG M EA++L N+M+ RG
Sbjct: 501 IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 123/237 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  + ++I+GLC  +KFE++  L  +M   G+ ANT+   TL+ A+ + G 
Sbjct: 485 MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGA 544

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L+++ML     +  +T+  LI  LC++G + + +  F  M   GL+PN      
Sbjct: 545 MQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNI 604

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC+   I+ A     +M  R + PD   Y +LI+G  K    +EALNL +++   G
Sbjct: 605 LINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEG 664

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           +  D   Y +L+    + G   +A +L    +  G +P+E+    L+    + G+ +
Sbjct: 665 ICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 126/252 (50%), Gaps = 5/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   +  +G ++  LC+ ++ + +  LL +M  +G   N ++  TL+ A  K G 
Sbjct: 208 MLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGR 267

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +E L LL+EML       V TF   I GLCK   + EA     RM   G  PN   Y  
Sbjct: 268 VNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGV 327

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN-LKNRMTEV 179
           L+ GLC+   ++ AR L +++P     P+   +  LI+GY+      EA   +   M  V
Sbjct: 328 LMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 383

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  Y +L+ GL + G+L  AR L +EM  +G  P+ I    L+ +  + G ++EA
Sbjct: 384 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 443

Query: 240 IELQNEMMGRGL 251
             + +EM G+GL
Sbjct: 444 RNVLDEMSGKGL 455



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 4/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  +   Y  +I  LC + K +D+  +  +M   G   +     +L+    K  +
Sbjct: 450 MSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNK 509

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L  +ML   +    +T+  LI    + G ++EA+     M   G   +   Y  
Sbjct: 510 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 569

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC+   IE+   LF++M  + + P+  +   LI+G  +  + + AL     M   G
Sbjct: 570 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 629

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y SL+ GL + G  QEA  LF ++   GI PD I   +L+  H + G  D+A 
Sbjct: 630 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA- 688

Query: 241 ELQNEMMGRGLLSG 254
              + ++ RG+ SG
Sbjct: 689 ---HLLLSRGVDSG 699



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 107/272 (39%), Gaps = 40/272 (14%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL--- 68
           +Y  +I  L    +F+    LL +MK+ G+     +   +M  Y +AG P +A  LL   
Sbjct: 113 VYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDM 172

Query: 69  ---------------------------------DEMLDSRIEVTVVTFCVLIDGLCKSGL 95
                                             EML   I  TV TF V++  LC    
Sbjct: 173 RGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNE 232

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           V  A      M   G  PN  VY  LI  L K   +     L +EM     IPD   +  
Sbjct: 233 VDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFND 292

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
            I G  K     EA  L +RM   G   +   Y  L+ GL R G + EAR+L +++    
Sbjct: 293 AIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN-- 350

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             P+ +L  +L+  +  RG +DEA  + +E M
Sbjct: 351 --PNVVLFNTLINGYVSRGRLDEAKAVMHESM 380


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 137/250 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I AD+  Y T+I+G CI  K +++  LL+EM    +  +    T L+DA  K G+
Sbjct: 473 MTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGK 532

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S+L  ML + ++  V T+  L++G      V++A   F  M   G+ P+V  YT 
Sbjct: 533 VKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 592

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A NLF EM +++M+PDT  Y++L+DG  K        +L + M + G
Sbjct: 593 LINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRG 652

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y SL+ GL + GHL +A  LF++M  +GI P+      LL    + G + +A 
Sbjct: 653 QPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQ 712

Query: 241 ELQNEMMGRG 250
           E+  +++ +G
Sbjct: 713 EVFQDLLTKG 722



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 131/249 (52%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+  K ++ +Y TII  LC      ++  L SEM   G++A+ V  +TL+  +   G+  
Sbjct: 440 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLK 499

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA+ LL+EM+   I   V T+ +L+D L K G V+EA      M    + P+V  Y  L+
Sbjct: 500 EAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLM 559

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +G      +++A+++F+ M    + PD   YT LI+G+ K +   EALNL   M +  + 
Sbjct: 560 NGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMV 619

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   Y+SLV GL + G +     L  EM  RG   D I   SL+    + G++D+AI L
Sbjct: 620 PDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIAL 679

Query: 243 QNEMMGRGL 251
            N+M  +G+
Sbjct: 680 FNKMKDQGI 688



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 130/247 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T++ G  +  + + ++ + + M   G+T +    T L++ + K+    EAL
Sbjct: 548 VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEAL 607

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM    +    VT+  L+DGLCKSG +    D    M D G   +V  Y +LIDGL
Sbjct: 608 NLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGL 667

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +++A  LF++M  + + P+T  +T L+DG  K    K+A  +   +   G  LD+
Sbjct: 668 CKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDV 727

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  +++G  + G L+EA  +  +M   G +P+ +    ++   +++   D+A +L  +
Sbjct: 728 YIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQ 787

Query: 246 MMGRGLL 252
           M+ RGLL
Sbjct: 788 MIARGLL 794



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 120/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G+C       +  LL ++       N  + +T++DA  K    SEA  L  EM 
Sbjct: 415 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMT 474

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G C  G ++EAI     M    ++P+V  YT L+D L K+  ++
Sbjct: 475 VKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVK 534

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+++   M K  + PD   Y  L++GYL     K+A ++ N M+ +GV  D++ YT L+
Sbjct: 535 EAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 594

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + EA  LF EM  + ++PD +   SL+    + G +    +L +EM  RG
Sbjct: 595 NGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRG 652



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I A++  Y T+I+G CI  K +++  LL+ M    +  N      L+DA  K G+
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGK 218

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S+L  ML + ++  V+T+  L+DG      V++A   F  M   G+ P+V  Y  
Sbjct: 219 VKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNI 278

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK   +++A NLF EM      P    +  ++D + K + +  A++L +R+   G
Sbjct: 279 MINGFCKIKRVDKALNLFKEMI-LSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKG 337

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL     L+      G +     +  +++ RG  P  +   +L+K    +G + +A+
Sbjct: 338 IQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKAL 397

Query: 241 ELQNEMMGRGL 251
              ++++ +G 
Sbjct: 398 HFHDKLLAQGF 408



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 105/216 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ DL     +I   C   +      +L+++ + G   +TV   TL+      G+  +
Sbjct: 336 KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 395

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL   D++L    ++  V++  LI+G+CK G  R AI    ++      PNV +Y+ +ID
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK   +  A  LF EM  + +  D   Y+ LI G+      KEA+ L N M    ++ 
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           D+  YT LV  L + G ++EA+ +   M+   + PD
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPD 551



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 92/181 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  D   Y +++ GLC   +      L+ EM++ G  A+ +   +L+D   K G 
Sbjct: 613 MHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGH 672

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L ++M D  I     TF +L+DGLCK G +++A + F  +   G H +V +Y  
Sbjct: 673 LDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNV 732

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G CK+  +E A  +  +M +   IP+   +  +I+   K +   +A  L  +M   G
Sbjct: 733 MIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792

Query: 181 V 181
           +
Sbjct: 793 L 793



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 108/220 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+++ + G   +TV   TL+      G+  EAL   D++L    ++  V++  LI+G+C
Sbjct: 50  VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G  R AI +  ++      PNV +Y  +ID LCK   +  A  LF EM  + +  +  
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ LI G+      KEAL L N M    ++ ++  Y  LV  L + G ++EA+ +   M
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   +  + I   +L+  ++    + +A  + N M   G+
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 269



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 110/233 (47%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T+I GLC++ + +++     ++   G   N V   TL++   + G+   A+  L ++   
Sbjct: 68  TLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGR 127

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
             +  V  +  +ID LCK  LV EA   F  M   G+  NV  Y+ LI G C    ++ A
Sbjct: 128 LAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEA 187

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L + M  + + P+   Y  L+D   K    KEA ++   M +  V  ++  Y++L+ G
Sbjct: 188 LGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDG 247

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
                 +++A+ +F+ M   G+ PD      ++    +   +D+A+ L  EM+
Sbjct: 248 YFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI 300



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 77/156 (49%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           +LS+L ++L        VT   LI GLC  G V+EA+ +  ++   G   N   Y  LI+
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G+C+      A     ++  R   P+   Y  +ID   K++   EA  L + MT  G+  
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           ++  Y++L++G    G L+EA  L + M+ + I P+
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPN 202



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 75/147 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +   AD+  Y ++I GLC     + +  L ++MK+ G+  NT   T L+D   K G 
Sbjct: 648 MRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 707

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +  ++L     + V  + V+I G CK GL+ EA+    +M + G  PN   +  
Sbjct: 708 LKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDI 767

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI 147
           +I+ L KK+  ++A  L  +M  R ++
Sbjct: 768 IINALFKKDENDKAEKLLRQMIARGLL 794



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 123/313 (39%), Gaps = 69/313 (22%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  ++  Y  ++  LC E K +++K +L+ M +  + +N +  +TLMD YF   E  +
Sbjct: 197 KTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKK 256

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI---------------------DY 102
           A  + + M    +   V ++ ++I+G CK   V +A+                     D 
Sbjct: 257 AQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDS 316

Query: 103 FGRMPDF-------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           F +M  +             G+ P++     LI+  C    I    ++  ++ KR   P 
Sbjct: 317 FAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPS 376

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH--------- 200
           T     LI G       K+AL+  +++   G  L+  +Y +L+ G+ + G          
Sbjct: 377 TVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLR 436

Query: 201 --------------------------LQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
                                     + EA  LF EM  +GI  D +   +L+      G
Sbjct: 437 KIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVG 496

Query: 235 NMDEAIELQNEMM 247
            + EAI L NEM+
Sbjct: 497 KLKEAIGLLNEMV 509


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/256 (34%), Positives = 132/256 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  +   YG +I G+C   + E +++LL EM+  G+  N VI  T MD Y + G+
Sbjct: 348 MSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGK 407

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L   M    I   V T+ +L +GLCK     EA      M + G+ PNV  +T 
Sbjct: 408 MDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTM 467

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+  CK+  +  A  LF +M K+  +P+   Y  LID Y K E  K+A  +K+ M   G
Sbjct: 468 FIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKG 527

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y+SL+ G    G + EA  LF+EM  +GI  +     S++    + G  DEA 
Sbjct: 528 LLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAF 587

Query: 241 ELQNEMMGRGLLSGSK 256
           +L +EMM  GL+   +
Sbjct: 588 KLYDEMMKIGLIPDDR 603



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 122/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +   +  Y  +I         E+++ +  EM+E  +  +  + ++++    + G 
Sbjct: 278 MEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGN 337

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L DEM    I     T+  LI G+CK+G +  A      M   G+  N+ ++  
Sbjct: 338 MKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNT 397

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +DG C++  ++ A  L   M K+ +  D   Y  L +G  K   + EA  + N M E G
Sbjct: 398 TMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKG 457

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  +T  +    + G+L EA  LF +M  +G +P+ I   +L+  + ++  + +A 
Sbjct: 458 VKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAH 517

Query: 241 ELQNEMMGRGLL 252
           ++++EM+ +GLL
Sbjct: 518 KIKSEMINKGLL 529



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 1/251 (0%)

Query: 1   MKGKNI-KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M GK I K ++  Y T++         +    +L  M++  +  +    + L+  Y  +G
Sbjct: 242 MVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSG 301

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  EA  + +EM +  IE+ V  +  +I    + G ++ A   F  M    + PN   Y 
Sbjct: 302 DIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYG 361

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ALI G+CK   +E A  L  EM  + +  +   +   +DGY +     EAL L+  M + 
Sbjct: 362 ALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKK 421

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G++ D+  Y  L  GL +     EA+ + + M+ +G+ P+ +     ++ + + GN+ EA
Sbjct: 422 GINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEA 481

Query: 240 IELQNEMMGRG 250
             L  +M  +G
Sbjct: 482 ERLFRDMEKKG 492



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 84/162 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K ++  +   I   C E    +++ L  +M++ G   N +   TL+DAY K  +
Sbjct: 453 MVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEK 512

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +  EM++  +   + T+  LI G C  G V EA+  F  M   G+  NVA YT+
Sbjct: 513 VKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTS 572

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +I GL K+   + A  L+DEM K  +IPD   +T+L+  + K
Sbjct: 573 MISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 114/239 (47%), Gaps = 3/239 (1%)

Query: 16  IIWGLCIESK-FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +++ +C +++ F+++  +   ++E GL      C  L+ A  + GE    +     M++S
Sbjct: 150 MLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVES 209

Query: 75  -RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGL-HPNVAVYTALIDGLCKKNCIE 132
            + E+ V +  ++ID LC+ G V +A +    M   G+  PNV  Y  L++    +   +
Sbjct: 210 NKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRK 269

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               +   M K  ++     Y+ LI  Y      +EA  +   M E  +++D+  Y+S++
Sbjct: 270 GVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMI 329

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               R G+++ A  LF EM  R I+P+     +L+    + G M+ A  L  EM  +G+
Sbjct: 330 SWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGV 388



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 2/173 (1%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
           VL+  L + G V   + +F RM +       V   T +ID LC++  +E+A+ L DEM  
Sbjct: 185 VLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVG 244

Query: 144 RDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           + ++ P+   Y  L++ Y+  +  K    +   M +  V   +  Y+ L+   S  G ++
Sbjct: 245 KGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIE 304

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           EA  +F EM  + I  D  +  S++      GNM  A  L +EM  R ++  +
Sbjct: 305 EAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNA 357


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 135/254 (53%), Gaps = 3/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKF---EDSKLLLSEMKENGLTANTVICTTLMDAYFK 57
           MK + + A++  Y T+I G C   K      +  +L EM+ +G+  N V    L+D + K
Sbjct: 189 MKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCK 248

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
               S A+ +  EM    ++  VVT+  LI+GLC +G V EA     +M +  L PN+  
Sbjct: 249 DKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIIT 308

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           + AL++G CK   +++A  LFD+MPK+ + P+ T Y  LID Y K E+ ++A  L   M 
Sbjct: 309 HNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIML 368

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
             GV  D++ Y  L+ GL R G L+ AR L  EM  + +  D I    L+     +G M 
Sbjct: 369 GKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMK 428

Query: 238 EAIELQNEMMGRGL 251
           +A+ L +EM  +GL
Sbjct: 429 KALRLLDEMCRKGL 442



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 129/253 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  +   +  +I G C +     +  + +EM   G+  N V   +L++     G+
Sbjct: 227 MRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGK 286

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA +L D+M++S ++  ++T   L++G CK+ +V++A + F  MP  G+ PNV  Y  
Sbjct: 287 VNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNI 346

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK   +E A  L+  M  + + PD + Y  LI G  +    + A NL + M    
Sbjct: 347 LIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKH 406

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y  L+  L   G +++A  L  EM  +G+ P ++   +++  + + GN+  A+
Sbjct: 407 LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAAL 466

Query: 241 ELQNEMMGRGLLS 253
            L+++M   G L+
Sbjct: 467 NLRSQMEKVGRLA 479



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 117/229 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K ++  +  ++ G C     + +  L  +M + G+T N      L+DAY K     +A 
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAF 361

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L   ML   +   V T+  LI GLC+ G +  A +    M    L  ++  Y  LID L
Sbjct: 362 ALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSL 421

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C K  +++A  L DEM ++ + P    Y  +IDGY K  + + ALNL+++M +VG   ++
Sbjct: 422 CNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANV 481

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
             Y  L+ G  +   L++A  L +EM+ +G++P+ +    + ++  E+G
Sbjct: 482 ATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 3/215 (1%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           GL  +   C  LM    K GE  +   +  EM+  RIE T+++F ++I+GLCK G + +A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI---ERARNLFDEMPKRDMIPDTTAYTAL 156
            D    M   G+  NV  Y  LIDG CK   I    +A  +  EM    + P+   +  L
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNIL 242

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           IDG+ K ++   A+ +   M   GV  ++  Y SL+ GL   G + EA  L  +M+   +
Sbjct: 243 IDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL 302

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            P+ I   +LL    +   + +A EL ++M  +G+
Sbjct: 303 KPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGI 337



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/153 (36%), Positives = 85/153 (55%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  Y  +I GLC +   E ++ L+SEM    L A+ +    L+D+    GE
Sbjct: 367 MLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGE 426

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL LLDEM    ++ + +T+  +IDG CK G +R A++   +M   G   NVA Y  
Sbjct: 427 MKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNV 486

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           LI G CKK+ +E A  L +EM ++ +IP+   Y
Sbjct: 487 LIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTY 519



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 62/128 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K++KADL  Y  +I  LC + + + +  LL EM   GL  + +   T++D Y K G 
Sbjct: 402 MDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGN 461

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL+L  +M        V T+ VLI G CK   + +A      M + GL PN   Y  
Sbjct: 462 LRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEI 521

Query: 121 LIDGLCKK 128
           + + + +K
Sbjct: 522 VTEEMMEK 529


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  144 bits (364), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 135/248 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N + ++ ++ T+I  LC + +  ++  + SEM   G++ N V   +L+    K  E
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +L++EM+DS+I   V T   ++D LCK G+V EA D    M   G+ PNV  Y A
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C +N ++ A  +FD M  +D + +  +Y  LI+GY K +S  +A+ L   M+   
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +L+ GL   G LQ+A  LFHEM+ RG +PD +   +L     +  ++D+A+
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 440

Query: 241 ELQNEMMG 248
            L   + G
Sbjct: 441 ALLKAIEG 448



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 120/279 (43%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GLC+E K  ++  L  +M   G   N V   TL++   K G  S A+ 
Sbjct: 137 QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIR 196

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI---- 122
           LL  M     +  VV F  LID LCK   V EA + F  M   G+ PN+  Y +LI    
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256

Query: 123 -------------------------------DGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                                          D LCK+  +  A ++ D M  R + P+  
Sbjct: 257 KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVV 316

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y AL+DG+        A+ + + M       ++ +Y +L+ G  +   + +A  LF EM
Sbjct: 317 TYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM 376

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             + + P+ +   +L+      G + +AI L +EM+ RG
Sbjct: 377 SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 415



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y ++I GLC   +++    L++EM ++ +  +     T++DA  K G 
Sbjct: 236 MITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGM 295

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  ++D M+   +E  VVT+  L+DG C    V  A+  F  M       NV  Y  
Sbjct: 296 VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNT 355

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +++A  LF+EM ++++ P+T  Y  LI G       ++A++L + M   G
Sbjct: 356 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 415

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y +L   L +  HL +A  L   + G    PD  +  ++L      G +++A 
Sbjct: 416 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDAR 475

Query: 241 ELQNEMMGRGL 251
           +L + +  +GL
Sbjct: 476 DLFSNLSSKGL 486



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 120/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+     +I  LC  ++ + +   L+++ + G   +    TTL+      G+
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L D+M+    +  VVT+  LI+GLCK G    AI     M      PNV V++ 
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   +  A N+F EM  + + P+   Y +LI G  K   +K    L N M +  
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+    ++V  L + G + EA  +   MI RG+ P+ +   +L+  H  R  +D A+
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 241 ELQNEMMGR 249
           ++ + M+ +
Sbjct: 336 KVFDTMVHK 344



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 116/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+    T++  LC E    ++  ++  M   G+  N V    LMD +    E
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ + D M+       V+++  LI+G CK   V +A+  F  M    L PN   Y  
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    ++ A +LF EM  R  IPD   Y  L D   K+    +A+ L   +    
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            D D+  YT+++ G+ R G L++AR LF  +  +G+ P+      ++    ++G + EA 
Sbjct: 451 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 510

Query: 241 ELQNEMMGRG 250
           +L +EM   G
Sbjct: 511 KLFSEMNKNG 520



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++  Y  ++ G C+ ++ + +  +   M      AN +   TL++ Y K   
Sbjct: 306 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 365

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EM    +    VT+  LI GLC  G +++AI  F  M   G  P++  Y  
Sbjct: 366 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 425

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L D LCK   +++A  L   +   +  PD   YT ++DG  +    ++A +L + ++  G
Sbjct: 426 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 485

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD-EA 239
           +  ++  Y  ++ GL + G L EA  LF EM   G  P++    +L+ + + R N     
Sbjct: 486 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC-TYNLITRGFLRNNEALRT 544

Query: 240 IELQNEMMGRGL 251
           IEL  EM+ RG 
Sbjct: 545 IELLEEMLARGF 556



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 96/205 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  +   Y T+I GLC   + +D+  L  EM   G   + V   TL D   K   
Sbjct: 376 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 435

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++LL  +  S  +  +  +  ++DG+C++G + +A D F  +   GL PNV  Y  
Sbjct: 436 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 495

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK+  +  A  LF EM K    P+   Y  +  G+L++      + L   M   G
Sbjct: 496 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 555

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEAR 205
             +D++  T LV  LS  G  Q  +
Sbjct: 556 FSVDVSTTTLLVGMLSDDGLDQSVK 580



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 1/230 (0%)

Query: 23  ESKFEDSKLLLS-EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV 81
           ++K   + L LS +M   G+  +      ++++         A S L ++L    +    
Sbjct: 82  KTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDAT 141

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           TF  LI GLC  G + EA+  F +M   G  PNV  Y  LI+GLCK      A  L   M
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 201

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            + +  P+   ++ LID   K     EA N+ + M   G+  ++  Y SL+ GL +    
Sbjct: 202 EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 261

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    L +EM+   I+PD     +++    + G + EA ++ + M+ RG+
Sbjct: 262 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 98/219 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+  A++  Y T+I G C     + +  L  EM    LT NTV   TL+      G 
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+SL  EM+       +VT+  L D LCK+  + +A+     +      P++ +YT 
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG+C+   +E AR+LF  +  + + P+   Y  +I G  K     EA  L + M + G
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              +   Y  +  G  R         L  EM+ RG   D
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 559



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 93/209 (44%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +TV    L+ +  K    S  LSL  +M    I   V T  ++I+ LC    V  A    
Sbjct: 69  STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 128

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            ++   G  P+   +T LI GLC +  I  A +LFD+M      P+   Y  LI+G  K 
Sbjct: 129 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKV 188

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
            +   A+ L   M +     ++  +++L+  L +   + EA  +F EMI +GI P+ +  
Sbjct: 189 GNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTY 248

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            SL+    +         L NEM+   ++
Sbjct: 249 NSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 88/189 (46%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EALS  + ML  +   + V F  L+  + K+      +    +M  FG+ P+V     +I
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC  N ++ A +   ++ K    PD T +T LI G        EAL+L ++M   G  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL + G+   A  L   M      P+ ++  +L+    +   + EA  +
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 243 QNEMMGRGL 251
            +EM+ +G+
Sbjct: 233 FSEMITKGI 241



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/123 (21%), Positives = 52/123 (42%)

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A + F+ M  +   P T  +  L+    K +     L+L  +M   G+  D+   
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             ++  L     +  A     +++  G  PD     +L++     G + EA+ L ++M+G
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 249 RGL 251
            G 
Sbjct: 169 EGF 171


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 135/248 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N + ++ ++ T+I  LC + +  ++  + SEM   G++ N V   +L+    K  E
Sbjct: 201 MEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 260

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +L++EM+DS+I   V T   ++D LCK G+V EA D    M   G+ PNV  Y A
Sbjct: 261 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C +N ++ A  +FD M  +D + +  +Y  LI+GY K +S  +A+ L   M+   
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +L+ GL   G LQ+A  LFHEM+ RG +PD +   +L     +  ++D+A+
Sbjct: 381 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 440

Query: 241 ELQNEMMG 248
            L   + G
Sbjct: 441 ALLKAIEG 448



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 120/279 (43%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GLC+E K  ++  L  +M   G   N V   TL++   K G  S A+ 
Sbjct: 137 QPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIR 196

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI---- 122
           LL  M     +  VV F  LID LCK   V EA + F  M   G+ PN+  Y +LI    
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256

Query: 123 -------------------------------DGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                                          D LCK+  +  A ++ D M  R + P+  
Sbjct: 257 KLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVV 316

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y AL+DG+        A+ + + M       ++ +Y +L+ G  +   + +A  LF EM
Sbjct: 317 TYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM 376

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             + + P+ +   +L+      G + +AI L +EM+ RG
Sbjct: 377 SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 415



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y ++I GLC   +++    L++EM ++ +  +     T++DA  K G 
Sbjct: 236 MITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGM 295

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  ++D M+   +E  VVT+  L+DG C    V  A+  F  M       NV  Y  
Sbjct: 296 VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNT 355

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +++A  LF+EM ++++ P+T  Y  LI G       ++A++L + M   G
Sbjct: 356 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 415

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y +L   L +  HL +A  L   + G    PD  +  ++L      G +++A 
Sbjct: 416 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDAR 475

Query: 241 ELQNEMMGRGL 251
           +L + +  +GL
Sbjct: 476 DLFSNLSSKGL 486



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 120/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+     +I  LC  ++ + +   L+++ + G   +    TTL+      G+
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L D+M+    +  VVT+  LI+GLCK G    AI     M      PNV V++ 
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   +  A N+F EM  + + P+   Y +LI G  K   +K    L N M +  
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+    ++V  L + G + EA  +   MI RG+ P+ +   +L+  H  R  +D A+
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 241 ELQNEMMGR 249
           ++ + M+ +
Sbjct: 336 KVFDTMVHK 344



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 116/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+    T++  LC E    ++  ++  M   G+  N V    LMD +    E
Sbjct: 271 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNE 330

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ + D M+       V+++  LI+G CK   V +A+  F  M    L PN   Y  
Sbjct: 331 VDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNT 390

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    ++ A +LF EM  R  IPD   Y  L D   K+    +A+ L   +    
Sbjct: 391 LIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSN 450

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            D D+  YT+++ G+ R G L++AR LF  +  +G+ P+      ++    ++G + EA 
Sbjct: 451 WDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEAS 510

Query: 241 ELQNEMMGRG 250
           +L +EM   G
Sbjct: 511 KLFSEMNKNG 520



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 122/252 (48%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++  Y  ++ G C+ ++ + +  +   M      AN +   TL++ Y K   
Sbjct: 306 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 365

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EM    +    VT+  LI GLC  G +++AI  F  M   G  P++  Y  
Sbjct: 366 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 425

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L D LCK   +++A  L   +   +  PD   YT ++DG  +    ++A +L + ++  G
Sbjct: 426 LSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG 485

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD-EA 239
           +  ++  Y  ++ GL + G L EA  LF EM   G  P++    +L+ + + R N     
Sbjct: 486 LQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC-TYNLITRGFLRNNEALRT 544

Query: 240 IELQNEMMGRGL 251
           IEL  EM+ RG 
Sbjct: 545 IELLEEMLARGF 556



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 100/212 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  +   Y T+I GLC   + +D+  L  EM   G   + V   TL D   K   
Sbjct: 376 MSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 435

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++LL  +  S  +  +  +  ++DG+C++G + +A D F  +   GL PNV  Y  
Sbjct: 436 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 495

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK+  +  A  LF EM K    P+   Y  +  G+L++      + L   M   G
Sbjct: 496 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 555

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
             +D++  T LV  LS  G  Q  + +  +++
Sbjct: 556 FSVDVSTTTLLVGMLSDDGLDQSVKQILCKIV 587



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 1/230 (0%)

Query: 23  ESKFEDSKLLLS-EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV 81
           ++K   + L LS +M   G+  +      ++++         A S L ++L    +    
Sbjct: 82  KTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDAT 141

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           TF  LI GLC  G + EA+  F +M   G  PNV  Y  LI+GLCK      A  L   M
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 201

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            + +  P+   ++ LID   K     EA N+ + M   G+  ++  Y SL+ GL +    
Sbjct: 202 EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 261

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    L +EM+   I+PD     +++    + G + EA ++ + M+ RG+
Sbjct: 262 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 98/219 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+  A++  Y T+I G C     + +  L  EM    LT NTV   TL+      G 
Sbjct: 341 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 400

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+SL  EM+       +VT+  L D LCK+  + +A+     +      P++ +YT 
Sbjct: 401 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 460

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG+C+   +E AR+LF  +  + + P+   Y  +I G  K     EA  L + M + G
Sbjct: 461 ILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNG 520

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              +   Y  +  G  R         L  EM+ RG   D
Sbjct: 521 CSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVD 559



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 93/209 (44%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +TV    L+ +  K    S  LSL  +M    I   V T  ++I+ LC    V  A    
Sbjct: 69  STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 128

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            ++   G  P+   +T LI GLC +  I  A +LFD+M      P+   Y  LI+G  K 
Sbjct: 129 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKV 188

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
            +   A+ L   M +     ++  +++L+  L +   + EA  +F EMI +GI P+ +  
Sbjct: 189 GNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTY 248

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            SL+    +         L NEM+   ++
Sbjct: 249 NSLIHGLCKLCEWKHVTTLMNEMVDSKIM 277



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 88/189 (46%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EALS  + ML  +   + V F  L+  + K+      +    +M  FG+ P+V     +I
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC  N ++ A +   ++ K    PD T +T LI G        EAL+L ++M   G  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQ 172

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL + G+   A  L   M      P+ ++  +L+    +   + EA  +
Sbjct: 173 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNI 232

Query: 243 QNEMMGRGL 251
            +EM+ +G+
Sbjct: 233 FSEMITKGI 241



 Score = 39.3 bits (90), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/123 (21%), Positives = 52/123 (42%)

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A + F+ M  +   P T  +  L+    K +     L+L  +M   G+  D+   
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             ++  L     +  A     +++  G  PD     +L++     G + EA+ L ++M+G
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 249 RGL 251
            G 
Sbjct: 169 EGF 171


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 135/250 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I AD+  Y T+I+G CIE K +++  LL+EM    +  N      L+DA  K G+
Sbjct: 225 MTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S+L  ML + ++  V+T+  L+DG      V++A   F  M   G+ P+V  YT 
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A NLF EM +++M+P    Y++LIDG  K        +L + M + G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRG 404

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y+SL+ GL + GHL  A  LF++M  + I P+      LL    + G + +A 
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464

Query: 241 ELQNEMMGRG 250
           E+  +++ +G
Sbjct: 465 EVFQDLLTKG 474



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 130/247 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T++ G  +  + + ++ + + M   G+T +    T L++ + K     EAL
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM    +   +VT+  LIDGLCKSG +    D    M D G   +V  Y++LIDGL
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGL 419

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   ++RA  LF++M  +++ P+   +T L+DG  K    K+A  +   +   G  L++
Sbjct: 420 CKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  ++ G  + G L+EA  +  +M   G +P+     +++   +++   D+A +L  +
Sbjct: 480 YTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQ 539

Query: 246 MMGRGLL 252
           M+ RGLL
Sbjct: 540 MIARGLL 546



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G+C       +  LL ++       N  + +T++DA  K    SEA  L  EM 
Sbjct: 167 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMT 226

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G C  G ++EAI     M    ++PNV  Y  L+D LCK+  ++
Sbjct: 227 VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+++   M K  + PD   Y+ L+DGY      K+A ++ N M+ +GV  D++ YT L+
Sbjct: 287 EAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + EA  LF EM  + ++P  +   SL+    + G +    +L +EM  RG
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRG 404



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 118/248 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ DL     +I   C   +      +L+++ + G   +TV   TL+      G+  +
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL   D++L    ++  V++  LI+G+CK G  R AI    ++      PNV +Y+ +ID
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 207

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK   +  A  LF EM  + +  D   Y+ LI G+      KEA+ L N M    ++ 
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y  LV  L + G ++EA+ +   M+   + PD I   +L+  ++    + +A  + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 244 NEMMGRGL 251
           N M   G+
Sbjct: 328 NAMSLMGV 335



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 91/181 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+   +  Y ++I GLC   +      L+ EM++ G  A+ +  ++L+D   K G 
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGH 424

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A++L ++M D  I   + TF +L+DGLCK G +++A + F  +   G H NV  Y  
Sbjct: 425 LDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK+  +E A  +  +M     IP+   +  +I    K +   +A  L  +M   G
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544

Query: 181 V 181
           +
Sbjct: 545 L 545



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +   AD+  Y ++I GLC     + +  L ++MK+  +  N    T L+D   K G 
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +  ++L     + V T+ V+I+G CK GL+ EA+    +M D G  PN   +  
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFET 519

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI 147
           +I  L KK+  ++A  L  +M  R ++
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 92/197 (46%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++D++ K    S A+SL   +    I+  ++T  +LI+  C  G +        ++   G
Sbjct: 65  ILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+      LI GLC K  +++A +  D++  +    +  +Y  LI+G  K    + A+
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 184

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L  ++       ++  Y++++  L +   + EA  LF EM  +GI  D +   +L+   
Sbjct: 185 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244

Query: 231 YERGNMDEAIELQNEMM 247
              G + EAI L NEM+
Sbjct: 245 CIEGKLKEAIGLLNEMV 261



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 23/121 (19%), Positives = 56/121 (46%)

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           ++ A + F+ M      P    +  ++D + K + +  A++L +R+   G+  DL     
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+      G +     +  +++ RG  PD +   +L+K    +G + +A+   ++++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 251 L 251
            
Sbjct: 160 F 160


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 133/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N + D+ +Y +II  LC + +   +  L SEM   G++ +     +L+ A     E
Sbjct: 190 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 249

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL+EM++S+I   VV F  ++D LCK G V EA D    M   G+ PNV  Y A
Sbjct: 250 WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 309

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A  +FD M  +   PD  +Y+ LI+GY K +  ++A+ L   M    
Sbjct: 310 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 369

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y++L+ GL   G LQ+A  LFHEM+ RG +PD +    LL    +   +DEAI
Sbjct: 370 LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAI 429

Query: 241 ELQNEMMGRGL 251
            L   + G  +
Sbjct: 430 ALLKAIEGSNM 440



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I   +  Y ++I  LC   +++    LL+EM  + +  N VI +T++DA  K G+
Sbjct: 225 MIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGK 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  ++D M+   +E  VVT+  L+DG C    + EA+  F  M   G  P+V  Y+ 
Sbjct: 285 VMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYST 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG--------------------- 159
           LI+G CK   IE+A  LF+EM ++++IP+T  Y+ L+ G                     
Sbjct: 345 LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 404

Query: 160 -------------YL-KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                        YL K+    EA+ L   +    +D D+  YT ++ G+ R G L+ AR
Sbjct: 405 QIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 464

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            LF  +  +G+ P+      ++    ++G + EA +L  EM  +G
Sbjct: 465 DLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 509



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + T+I GLC+E K  +   L  +M   G   N V   TL++   K G  S A+ 
Sbjct: 126 QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIR 185

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH-------------- 112
           LL  M     +  VV +  +ID LCK   V +A + F  M   G+               
Sbjct: 186 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALC 245

Query: 113 ---------------------PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                                PNV +++ ++D LCK+  +  A ++ D M KR + P+  
Sbjct: 246 NLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVV 305

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y AL+DG+       EA+ + + M   G   D+ +Y++L+ G  +   +++A  LF EM
Sbjct: 306 TYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM 365

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             + ++P+ +   +L+      G + +AI L +EM+ RG
Sbjct: 366 CRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 404



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  ++     +I   C   +   +  +L+++ + G   N     TL+      G+
Sbjct: 85  MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E L L D+M+    +  VVT+  LI+GLCK G    AI     M      P+V VYT+
Sbjct: 145 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 204

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   + +A NLF EM  + + P    Y +LI        +K    L N M    
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 264

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  ++++V  L + G + EA  +   MI RG+ P+ +   +L+  H  R  MDEA+
Sbjct: 265 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 324

Query: 241 ELQNEMMGRGL 251
           ++ + M+ +G 
Sbjct: 325 KVFDTMVCKGF 335



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++  Y  ++ G C+ S+ +++  +   M   G   + V  +TL++ Y K   
Sbjct: 295 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 354

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EM    +    VT+  L+ GLC  G +++AI  F  M   G  P+   Y  
Sbjct: 355 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 414

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK   ++ A  L   +   +M PD   YT +IDG  +    + A +L + ++  G
Sbjct: 415 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 474

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD-EA 239
           +  ++  YT ++ GL + G L EA  LF EM  +G  P+     +L+ + + R N     
Sbjct: 475 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGC-TYNLITRGFLRNNETLRG 533

Query: 240 IELQNEMMGRGL 251
           I+L  EM+ RG 
Sbjct: 534 IQLLQEMLARGF 545



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 100/219 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  Y T+I G C   + E +  L  EM    L  NTV  +TLM      G 
Sbjct: 330 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGR 389

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L  EM+        V++C+L+D LCK+  + EAI     +    + P++ +YT 
Sbjct: 390 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 449

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG+C+   +E AR+LF  +  + + P+   YT +I+G  +     EA  L   M   G
Sbjct: 450 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 509

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              +   Y  +  G  R         L  EM+ RG   D
Sbjct: 510 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD 548



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 99/200 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ GLC   + +D+  L  EM   G   + V    L+D   K     EA++LL  + 
Sbjct: 377 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 436

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S ++  +  + ++IDG+C++G +  A D F  +   GLHPNV  YT +I+GLC++  + 
Sbjct: 437 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 496

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM ++   P+   Y  +  G+L++      + L   M   G   D++  T LV
Sbjct: 497 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 556

Query: 193 WGLSRCGHLQEARVLFHEMI 212
             LS  G  Q  + +  E +
Sbjct: 557 EMLSDDGLDQSVKQILSEFL 576



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 102/220 (46%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M   G+  N      L++++        A S+L ++L    +  + TF  LI GLC
Sbjct: 81  LSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLC 140

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + E +  F +M   G  PNV  Y  LI+GLCK      A  L   M + +  PD  
Sbjct: 141 VEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVV 200

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT++ID   K     +A NL + M   G+   +  Y SL+  L      +    L +EM
Sbjct: 201 VYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEM 260

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   I+P+ ++  +++    + G + EA ++ + M+ RG+
Sbjct: 261 VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 300



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 87/204 (42%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           T L+ +  K    S  LSL  +M    I   + T  +LI+  C    +  A     ++  
Sbjct: 63  TKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILK 122

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            G  PN+A +  LI GLC +  I    +LFD+M      P+   Y  LI+G  K  S   
Sbjct: 123 LGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSA 182

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A+ L   M +     D+  YTS++  L +   + +A  LF EMI +GI P      SL+ 
Sbjct: 183 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 242

Query: 229 KHYERGNMDEAIELQNEMMGRGLL 252
                        L NEM+   ++
Sbjct: 243 ALCNLCEWKHVTALLNEMVNSKIM 266



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 68/150 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y  ++  LC   + +++  LL  ++ + +  +  I T ++D   +AGE   A  L 
Sbjct: 408 DFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 467

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    +   V T+ ++I+GLC+ GL+ EA   FG M   G  PN   Y  +  G  + 
Sbjct: 468 SNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN 527

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID 158
           N   R   L  EM  R    D +  T L++
Sbjct: 528 NETLRGIQLLQEMLARGFSADVSTSTVLVE 557


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T+I  LC E    D++ L   MKE G+  N      LM  + +  +
Sbjct: 212 MVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDD 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+ L  E+L S +    V F  LIDG CK+    EA   F  MP FG+ P V VY +
Sbjct: 272 VNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNS 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
           L+DG  +    + A  L+ EM +  + PD                               
Sbjct: 332 LMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDG 391

Query: 150 ----TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                 AY ALID Y +  + +EAL    RMTEVG++ ++ +Y+SL+ G S+ G +Q A 
Sbjct: 392 VNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAM 451

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++ EM+ +GI P+ +   +L+  H + G +D A  L  EM+  G+
Sbjct: 452 AIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGI 497



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 115/230 (50%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           LP    ++ GL    +   +  L  EM   GL  + V   TL++A    G  ++A  + D
Sbjct: 151 LPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWD 210

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           +M+  +I+  VVT+  +I  LC+ G + +A   F  M + G+ PN   Y  L+ G C+++
Sbjct: 211 QMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRD 270

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +  A  L+ E+ K  + P+   +T LIDG+ K + F EA  +   M   GV   +  Y 
Sbjct: 271 DVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYN 330

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           SL+ G  R G+ QEA  L+ EM   G+ PDE  C  +++   + G M  A
Sbjct: 331 SLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVA 380



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 115/237 (48%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++ T+I G C   +F ++K +  EM   G+     +  +LMD  F++G   EAL+L  EM
Sbjct: 293 IFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEM 352

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               +     T  +++ GLC  G +  A  +   + + G++ N A Y ALID  C+   +
Sbjct: 353 TRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNL 412

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A      M +  + P+  +Y++LIDG+ K    + A+ +   M   G++ ++  YT+L
Sbjct: 413 EEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTAL 472

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + G ++ G +  A  L  EMI  GI P+ I    L+        + EA+    E  G
Sbjct: 473 IHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSG 529



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 101/204 (49%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  ++D   KA  P  A  L DEML   +  +VVT+  LI+     G V +A + + +M 
Sbjct: 154 CNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMV 213

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
              + PNV  YT +I  LC++ CI  A  LFD M +  M P+   Y  L+ G+ + +   
Sbjct: 214 AQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVN 273

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A+ L   + + G++ +   +T+L+ G  +     EA+ +F EM   G+ P   +  SL+
Sbjct: 274 SAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLM 333

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
              +  GN  EA+ L  EM   GL
Sbjct: 334 DGAFRSGNAQEALALYQEMTRLGL 357



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 3/167 (1%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VL+  L + GL+ EA+  F R+      P +    A++DGL K      A  LFDEM +R
Sbjct: 124 VLVIALSQMGLLDEALYVFRRLRTL---PALPACNAVLDGLVKARRPGCAWELFDEMLRR 180

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            ++P    Y  LI+      +  +A  + ++M    +D ++  YT+++  L   G + +A
Sbjct: 181 GLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDA 240

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             LF  M   G+ P++     L+  H +R +++ A+ L  E++  GL
Sbjct: 241 ERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGL 287



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 84/193 (43%), Gaps = 17/193 (8%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ ++  Y ++I G     K + +  + +EM   G+  N V  T L+  + K G    A 
Sbjct: 427 IEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAF 486

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI------------DYFGRMPDFGLH- 112
            L  EM+++ I    +T  VL+DGLC+   V+EA+            D      +F +  
Sbjct: 487 RLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEE 546

Query: 113 ----PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
               PN  +Y  LI GL        A  LF  M K  MIPD+  YT LI G         
Sbjct: 547 ECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLN 606

Query: 169 ALNLKNRMTEVGV 181
           A+ L   M ++GV
Sbjct: 607 AMMLYADMMKIGV 619


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  144 bits (363), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 133/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N + D+ +Y +II  LC + +   +  L SEM   G++ +     +L+ A     E
Sbjct: 199 MEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCE 258

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL+EM++S+I   VV F  ++D LCK G V EA D    M   G+ PNV  Y A
Sbjct: 259 WKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNA 318

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A  +FD M  +   PD  +Y+ LI+GY K +  ++A+ L   M    
Sbjct: 319 LMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE 378

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y++L+ GL   G LQ+A  LFHEM+ RG +PD +    LL    +   +DEAI
Sbjct: 379 LIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAI 438

Query: 241 ELQNEMMGRGL 251
            L   + G  +
Sbjct: 439 ALLKAIEGSNM 449



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I   +  Y ++I  LC   +++    LL+EM  + +  N VI +T++DA  K G+
Sbjct: 234 MIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGK 293

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  ++D M+   +E  VVT+  L+DG C    + EA+  F  M   G  P+V  Y+ 
Sbjct: 294 VMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYST 353

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG--------------------- 159
           LI+G CK   IE+A  LF+EM ++++IP+T  Y+ L+ G                     
Sbjct: 354 LINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 413

Query: 160 -------------YL-KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                        YL K+    EA+ L   +    +D D+  YT ++ G+ R G L+ AR
Sbjct: 414 QIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 473

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            LF  +  +G+ P+      ++    ++G + EA +L  EM  +G
Sbjct: 474 DLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 518



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + T+I GLC+E K  +   L  +M   G   N V   TL++   K G  S A+ 
Sbjct: 135 QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIR 194

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH-------------- 112
           LL  M     +  VV +  +ID LCK   V +A + F  M   G+               
Sbjct: 195 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALC 254

Query: 113 ---------------------PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                                PNV +++ ++D LCK+  +  A ++ D M KR + P+  
Sbjct: 255 NLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVV 314

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y AL+DG+       EA+ + + M   G   D+ +Y++L+ G  +   +++A  LF EM
Sbjct: 315 TYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM 374

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             + ++P+ +   +L+      G + +AI L +EM+ RG
Sbjct: 375 CRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRG 413



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  ++     +I   C   +   +  +L+++ + G   N     TL+      G+
Sbjct: 94  MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E L L D+M+    +  VVT+  LI+GLCK G    AI     M      P+V VYT+
Sbjct: 154 IGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTS 213

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   + +A NLF EM  + + P    Y +LI        +K    L N M    
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK 273

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  ++++V  L + G + EA  +   MI RG+ P+ +   +L+  H  R  MDEA+
Sbjct: 274 IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAV 333

Query: 241 ELQNEMMGRGL 251
           ++ + M+ +G 
Sbjct: 334 KVFDTMVCKGF 344



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++  Y  ++ G C+ S+ +++  +   M   G   + V  +TL++ Y K   
Sbjct: 304 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQR 363

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EM    +    VT+  L+ GLC  G +++AI  F  M   G  P+   Y  
Sbjct: 364 IEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCI 423

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK   ++ A  L   +   +M PD   YT +IDG  +    + A +L + ++  G
Sbjct: 424 LLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG 483

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD-EA 239
           +  ++  YT ++ GL + G L EA  LF EM  +G  P+     +L+ + + R N     
Sbjct: 484 LHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGC-TYNLITRGFLRNNETLRG 542

Query: 240 IELQNEMMGRGL 251
           I+L  EM+ RG 
Sbjct: 543 IQLLQEMLARGF 554



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 100/219 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  Y T+I G C   + E +  L  EM    L  NTV  +TLM      G 
Sbjct: 339 MVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGR 398

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L  EM+        V++C+L+D LCK+  + EAI     +    + P++ +YT 
Sbjct: 399 LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTI 458

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG+C+   +E AR+LF  +  + + P+   YT +I+G  +     EA  L   M   G
Sbjct: 459 VIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKG 518

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              +   Y  +  G  R         L  EM+ RG   D
Sbjct: 519 YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSAD 557



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 99/200 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ GLC   + +D+  L  EM   G   + V    L+D   K     EA++LL  + 
Sbjct: 386 YSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIE 445

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S ++  +  + ++IDG+C++G +  A D F  +   GLHPNV  YT +I+GLC++  + 
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLA 505

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM ++   P+   Y  +  G+L++      + L   M   G   D++  T LV
Sbjct: 506 EASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLV 565

Query: 193 WGLSRCGHLQEARVLFHEMI 212
             LS  G  Q  + +  E +
Sbjct: 566 EMLSDDGLDQSVKQILSEFL 585



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 102/220 (46%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M   G+  N      L++++        A S+L ++L    +  + TF  LI GLC
Sbjct: 90  LSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLC 149

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + E +  F +M   G  PNV  Y  LI+GLCK      A  L   M + +  PD  
Sbjct: 150 VEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVV 209

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT++ID   K     +A NL + M   G+   +  Y SL+  L      +    L +EM
Sbjct: 210 VYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEM 269

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   I+P+ ++  +++    + G + EA ++ + M+ RG+
Sbjct: 270 VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 309



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 87/204 (42%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           T L+ +  K    S  LSL  +M    I   + T  +LI+  C    +  A     ++  
Sbjct: 72  TKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILK 131

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            G  PN+A +  LI GLC +  I    +LFD+M      P+   Y  LI+G  K  S   
Sbjct: 132 LGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSA 191

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A+ L   M +     D+  YTS++  L +   + +A  LF EMI +GI P      SL+ 
Sbjct: 192 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIH 251

Query: 229 KHYERGNMDEAIELQNEMMGRGLL 252
                        L NEM+   ++
Sbjct: 252 ALCNLCEWKHVTALLNEMVNSKIM 275



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 68/150 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y  ++  LC   + +++  LL  ++ + +  +  I T ++D   +AGE   A  L 
Sbjct: 417 DFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLF 476

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    +   V T+ ++I+GLC+ GL+ EA   FG M   G  PN   Y  +  G  + 
Sbjct: 477 SNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRN 536

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID 158
           N   R   L  EM  R    D +  T L++
Sbjct: 537 NETLRGIQLLQEMLARGFSADVSTSTVLVE 566


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 132/252 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++G ++K D+ +Y TII  LC   +  D+  L SEM   G++ N     TL+  +   G 
Sbjct: 224 LEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGN 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SLL+EM    I   V TF +LID L K G + EAI  F  M    + PN+  YT+
Sbjct: 284 LKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTS 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK + +ERA  L  +M ++ + PD  +YT L+D   K    + A      +   G
Sbjct: 344 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             L++  Y  ++ GL + G   +   L  +M G+G +PD I   +++   +E+   D+A 
Sbjct: 404 YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAE 463

Query: 241 ELQNEMMGRGLL 252
           +   EM+ RGLL
Sbjct: 464 KFLREMIARGLL 475



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 112/236 (47%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T+I GLC   + + +     ++   G   + V   TL++   KAGE      LL ++   
Sbjct: 168 TLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGH 227

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            ++  VV +  +I  LCK+  V +A D +  M   G+ PNV  Y  LI G C    ++ A
Sbjct: 228 SVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEA 287

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            +L +EM  +++ PD   +  LID   K     EA++L   M    +  ++  YTSL+ G
Sbjct: 288 FSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDG 347

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L +  HL+ A  L  +M  +GI PD      LL    + G ++ A +    ++ +G
Sbjct: 348 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKG 403



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 108/220 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           + + + + G   + +   TL+      GE   AL   D+++    ++  V++  LI+GLC
Sbjct: 150 VFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLC 209

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G  +       ++    + P+V +YT +I  LCK   +  A +L+ EM  + + P+  
Sbjct: 210 KAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVF 269

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  LI G+    + KEA +L N M    ++ D+  +  L+  L + G + EA  LF EM
Sbjct: 270 TYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             + + P+ +   SL+    +  +++ AI L  +M  +G+
Sbjct: 330 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 369



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 101/221 (45%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  + + NG+T N      L++ +      + A S+   +L        +T   LI GLC
Sbjct: 115 LFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLC 174

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G ++ A+ +  ++   G   +   Y  LI+GLCK    +    L  ++    + PD  
Sbjct: 175 FCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVV 234

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT +I    K++   +A +L + M   G+  ++  Y +L++G    G+L+EA  L +EM
Sbjct: 235 MYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEM 294

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             + I PD      L+    + G +DEAI L  EM  + + 
Sbjct: 295 KLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMF 335



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 81/183 (44%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            +SL  +   + +   + T  +LI+  C    +  A   F  +   G HP+      LI 
Sbjct: 112 VISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIK 171

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC    I+RA    D++  +    D  +Y  LI+G  K    K    L  ++    V  
Sbjct: 172 GLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKP 231

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  YT+++  L +   + +A  L+ EMI +GI P+     +L+      GN+ EA  L 
Sbjct: 232 DVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLL 291

Query: 244 NEM 246
           NEM
Sbjct: 292 NEM 294



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 82/188 (43%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A++  + ML  R       F  ++  L K+      I  F +    G+ PN+     LI+
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             C    I  A ++F  + KR   PD      LI G       K AL   +++   G  L
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D  +Y +L+ GL + G  +    L  ++ G  + PD ++  +++    +   + +A +L 
Sbjct: 197 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLY 256

Query: 244 NEMMGRGL 251
           +EM+ +G+
Sbjct: 257 SEMIVKGI 264


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  144 bits (362), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 138/287 (48%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++  L  + T++ GLC   + ED++ +  EM   GLT + V   TL+  Y KAG 
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGC 275

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL++  EM    +   VVTF  LI  +C++G +  A+   G+M + GL  N   +TA
Sbjct: 276 LHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTA 335

Query: 121 LIDGLCK--------------KNC---------------------IERARNLFDEMPKRD 145
           LIDG C+              + C                     ++ AR L  EM  + 
Sbjct: 336 LIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           M PD   Y+ ++ GY K      A  L  +M + GV  D   Y+SL+ GL     L +A 
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            LF +M+  G+ PDE    +L+  H + GN+ +A+ L +EM+ +G+L
Sbjct: 456 ELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVL 502



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 132/252 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G     ++  Y T++   C   + + ++ L+  M+E G+  + V   T+++   KAG 
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGR 240

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + DEM    +    V++  L+ G CK+G + EA+  F  M   G+ P+V  +T+
Sbjct: 241 MEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTS 300

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  +C+   +ERA  L  +M +R +  +   +TALIDG+ ++    +AL     M E  
Sbjct: 301 LIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECR 360

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  L+ G  + G + EAR L HEM  +G+ PD +   ++L  + + G+ D A 
Sbjct: 361 IQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAF 420

Query: 241 ELQNEMMGRGLL 252
           EL  +M+ +G++
Sbjct: 421 ELNRKMLKKGVV 432



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 120/221 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D+  + ++I  +C     E +  L+ +M+E GL  N    T L+D + + G 
Sbjct: 286 MAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGF 345

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL  + EM + RI+ +VV + VLI+G CK G + EA +    M   G+ P+V  Y+ 
Sbjct: 346 LDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYST 405

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ G CK    + A  L  +M K+ ++PD   Y++LI G  +     +A  L  +M ++G
Sbjct: 406 ILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLG 465

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   YT+L+ G  + G++Q+A  L  EMI +G+LPD +
Sbjct: 466 LQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVV 506



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 132/248 (53%), Gaps = 3/248 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +  ++  Y  ++  LC   + E++  ++  +M+  G   N V   TL+ A+ +AGE   A
Sbjct: 150 VAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAA 209

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             L+  M +  +  ++VTF  +++GLCK+G + +A   F  M   GL P+   Y  L+ G
Sbjct: 210 ERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSG 269

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK  C+  A  +F EM ++ ++PD   +T+LI    +  + + A+ L  +M E G+ ++
Sbjct: 270 YCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMN 329

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER-GNMDEAIELQ 243
              +T+L+ G  R G L +A +   EM    I P  ++C ++L   Y + G MDEA EL 
Sbjct: 330 EFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPS-VVCYNVLINGYCKLGRMDEARELI 388

Query: 244 NEMMGRGL 251
           +EM  +G+
Sbjct: 389 HEMEAKGM 396



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 50/297 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+  +  Y  +I G C   + ++++ L+ EM+  G+  + V  +T++  Y K G+
Sbjct: 356 MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGD 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  +ML   +    +T+  LI GLC+   + +A + F +M   GL P+   YT 
Sbjct: 416 TDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTT 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA----------- 169
           LIDG CK+  +++A +L DEM K+ ++PD   Y+ LIDG  K    KEA           
Sbjct: 476 LIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYED 535

Query: 170 -----------------------------------LNLKNRMTEVGVD----LDLNAYTS 190
                                              +N  +++ +  +D    LD + Y+ 
Sbjct: 536 PVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSV 595

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           L+ G  R G++ +A     +++  G  P+    ISL++  +E G   EA  +  E++
Sbjct: 596 LIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 2/195 (1%)

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG-RMPDFGLHPNVA 116
           A  PS A  LL  ML   +   V T+ +L+  LC  G   EA+   G  M   G  PNV 
Sbjct: 133 ASLPS-ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVV 191

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y  L+   C+   ++ A  L   M +  + P    +  +++G  K    ++A  + + M
Sbjct: 192 TYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM 251

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              G+  D  +Y +LV G  + G L EA  +F EM  +G++PD +   SL+      GN+
Sbjct: 252 AREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNL 311

Query: 237 DEAIELQNEMMGRGL 251
           + A+ L  +M  RGL
Sbjct: 312 ERAVALVGQMRERGL 326



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 1/144 (0%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLF-DEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
           G+ PNV  Y  L+  LC +   E A  +  D+M      P+   Y  L+  + +      
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A  L   M E GV   L  + ++V GL + G +++AR +F EM   G+ PD +   +L+ 
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVS 268

Query: 229 KHYERGNMDEAIELQNEMMGRGLL 252
            + + G + EA+ +  EM  +G++
Sbjct: 269 GYCKAGCLHEALAVFAEMAQKGVV 292



 Score = 44.3 bits (103), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 15/173 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM----------KENGL-----TANT 45
           M  K +  D+  Y  +I GL   ++ ++++ LL ++          K   L     TA  
Sbjct: 496 MIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEF 555

Query: 46  VICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
                L+  +   G  ++A  +   MLD   ++    + VLI G C+ G + +A+ +  +
Sbjct: 556 KSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQ 615

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           +   G  PN     +L+ GL ++     A N+  E+     + D     ALID
Sbjct: 616 LLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID 668


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 125/242 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +NIK D   Y  II GLC +   +++  L +EM+  G  A+ +   TL+  +  AG 
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   LL +M+  +I   VVTF VLID   K G +REA      M   G+ PN   Y +
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+N +E A  + D M  +   PD   +  LI+GY K     + L L   M+  G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y +LV G  + G L+ A+ LF EM+ R + PD +    LL    + G +++A+
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493

Query: 241 EL 242
           E+
Sbjct: 494 EI 495



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 2/250 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K  L    T++ GLC+  K  D+ +L+  M E G   N V    +++   K+G+ + A+ 
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M +  I++  V + ++IDGLCK G +  A + F  M   G   ++  Y  LI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    L  +M KR + P+   ++ LID ++K    +EA  L   M + G+  +  
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNE 245
            Y SL+ G  +   L+EA  +   MI +G  PD I+  ++L   Y + N +D+ +EL  E
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD-IMTFNILINGYCKANRIDDGLELFRE 428

Query: 246 MMGRGLLSGS 255
           M  RG+++ +
Sbjct: 429 MSLRGVIANT 438



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 108/211 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  KAD+  Y T+I G C   +++D   LL +M +  ++ N V  + L+D++ K G+
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM+   I    +T+  LIDG CK   + EAI     M   G  P++  +  
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK N I+    LF EM  R +I +T  Y  L+ G+ +    + A  L   M    
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           V  D+ +Y  L+ GL   G L++A  +F ++
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKI 499



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  +  +I     E K  ++  LL EM + G+  NT+   +L+D + K   
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ ++D M+    +  ++TF +LI+G CK+  + + ++ F  M   G+  N   Y  
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV- 179
           L+ G C+   +E A+ LF EM  R + PD  +Y  L+DG   +   ++AL +  ++ +  
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503

Query: 180 ----------------------------------GVDLDLNAYTSLVWGLSRCGHLQEAR 205
                                             GV LD  AY  ++  L R   L +A 
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +LF +M   G  PDE+    L++ H    +   A EL  EM   G 
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I   +     +I   C   K   +   + ++ + G   +TVI  TL++       
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL L+D M++   + T++T   L++GLC +G V +A+    RM + G  PN   Y  
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++ +CK      A  L  +M +R++  D   Y+ +IDG  K  S   A NL N M   G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +L+ G    G   +   L  +MI R I P+ +    L+    + G + EA 
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353

Query: 241 ELQNEMMGRGL 251
           +L  EMM RG+
Sbjct: 354 QLLKEMMQRGI 364



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 126/242 (52%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  ++ T++ GLC+E +  ++  L+  M E G     +   TL++     G+ S+A+ L+
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+++  +   VT+  +++ +CKSG    A++   +M +  +  +   Y+ +IDGLCK 
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A NLF+EM  +    D   Y  LI G+     + +   L   M +  +  ++  +
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + L+    + G L+EA  L  EM+ RGI P+ I   SL+    +   ++EAI++ + M+ 
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396

Query: 249 RG 250
           +G
Sbjct: 397 KG 398



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 91/196 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + A+   Y T++ G C   K E +K L  EM    +  + V    L+D     GE
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL +  ++  S++E+ +  + ++I G+C +  V +A D F  +P  G+  +   Y  
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LC+K+ + +A  LF +M +    PD   Y  LI  +L  +    A  L   M   G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608

Query: 181 VDLDLNAYTSLVWGLS 196
              D++    ++  LS
Sbjct: 609 FPADVSTVKMVINMLS 624



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 96/227 (42%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +D+  L  +M ++      +    L  A  K  +    L+L  +M    I  ++ T  
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           ++I+  C+   +  A    G++   G  P+  ++  L++GLC +  +  A  L D M + 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              P       L++G   +    +A+ L +RM E G   +   Y  ++  + + G    A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L  +M  R I  D +    ++    + G++D A  L NEM  +G 
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 35/283 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y TI+ GLC E    ++  L +EM E G+  +    TTL++ Y K G  ++A++L 
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M+   ++  VVT+  LIDG CK   + +  + +  M    ++PN   Y  LI+G C  
Sbjct: 627 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 686

Query: 129 NCIERARNLFDEMPKRD-----------------------------------MIPDTTAY 153
            C+  A  L+DEM ++                                    ++PD   Y
Sbjct: 687 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 746

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             LI+G++K E+   A  L N+M   G+  D+  Y  ++ G SR G +QEA ++  +MI 
Sbjct: 747 NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 806

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           RG+ PD     SL+  H  + N+ EA  + +EM+ RG +   K
Sbjct: 807 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 137/281 (48%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++     +I  LC   K E++K  LS+M+E G+  + V   TL++AY + G   EA 
Sbjct: 354 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 413

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSG---------------------------LVR- 97
            L+D M    ++  V T+  +I+GLCK+G                           LV  
Sbjct: 414 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 473

Query: 98  -------EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
                  +A   F  MP  G+ P++  ++ALI  L K  C+++A   F +M    + PD 
Sbjct: 474 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 533

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             YT LI G+ ++    EAL +++ M E G  LD+  Y +++ GL +   L EA  LF E
Sbjct: 534 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTE 593

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  RG+ PD     +L+  + + GNM++A+ L   M+ R L
Sbjct: 594 MTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL 634



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 126/249 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +K  +  Y  II GLC   K+  +K +L EM + G++ +T     L+    +   
Sbjct: 419 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 478

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + DEM    +   +V+F  LI  L K+G + +A+ YF  M + GL P+  +YT 
Sbjct: 479 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 538

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   +  A  + DEM ++    D   Y  +++G  K +   EA  L   MTE G
Sbjct: 539 LIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 598

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   +T+L+ G  + G++ +A  LF  MI R + PD +   +L+    +   M++  
Sbjct: 599 VFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 658

Query: 241 ELQNEMMGR 249
           EL N+M+ R
Sbjct: 659 ELWNDMISR 667



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D  +Y  +I G C      ++  +  EM E G   + V   T+++   K   
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  L  EM +  +     TF  LI+G  K G + +A+  F  M    L P+V  Y  
Sbjct: 584 LSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 643

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK + +E+   L+++M  R + P+  +Y  LI+GY       EA  L + M E G
Sbjct: 644 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 703

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +  +    ++V G  R G+  +A      M+ +GI+PD I   +L+    +  NMD A 
Sbjct: 704 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 763

Query: 241 ELQNEMMGRGLL 252
            L N+M   GLL
Sbjct: 764 ALVNKMENSGLL 775



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 114/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  E+  +G+  N      +++A  K  +     S L +M +  +   VVT+  LI+  C
Sbjct: 345 IYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC 404

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + GL+ EA +    M   GL P V  Y A+I+GLCK     RA+ + DEM K  M PDT 
Sbjct: 405 RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 464

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  L+    ++++  +A  + + M   GV  DL ++++L+  LS+ G L +A   F +M
Sbjct: 465 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 524

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              G+ PD ++   L+      G M EA+++++EM+ +G
Sbjct: 525 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 97/210 (46%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +N ++   L+  Y +A +  E       +    + V++     L+ GL K G V  A + 
Sbjct: 286 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 345

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  +   G+  NV     +I+ LCK   IE  ++   +M ++ + PD   Y  LI+ Y +
Sbjct: 346 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 405

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               +EA  L + M+  G+   +  Y +++ GL + G    A+ +  EM+  G+ PD   
Sbjct: 406 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 465

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              LL +     NM +A  + +EM  +G++
Sbjct: 466 YNILLVECCRNDNMMDAERIFDEMPSQGVV 495


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 134/255 (52%), Gaps = 2/255 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y TI+ GLC     E +  L+ EM   G   +T+  TTLMDAY K GE
Sbjct: 478 MSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGE 537

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  LL  ML+ R++ T+VTF VL++G C SG++ +       M + G+ PN   + +
Sbjct: 538 MAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNS 597

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C KN +     ++  M  R ++PD+  Y  LI G+ K  + KEA  L   M E G
Sbjct: 598 LMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKG 657

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +    Y +L+ G  +     EAR LF EM   G++ ++ +    +  +YE GN +  +
Sbjct: 658 YSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITL 717

Query: 241 ELQNEMMGRGLLSGS 255
           EL +E M    LSG+
Sbjct: 718 ELCDEFMTE--LSGT 730



 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 129/255 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  D+  Y ++I G+C   K  +++ + +EM   GL  + V  T L+D Y KAGE
Sbjct: 373 MRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGE 432

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S+ ++M+   +   VVT+  L DGLCK+G +  A +    M   GL PNV  Y  
Sbjct: 433 MKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNT 492

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK   IE+   L +EM      PDT  YT L+D Y K     +A  L   M    
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   L  +  L+ G    G L++   L   M+ +GI+P+     SL+K++  + NM    
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATT 612

Query: 241 ELQNEMMGRGLLSGS 255
           E+   M  RG++  S
Sbjct: 613 EIYKAMHDRGVMPDS 627



 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 137/251 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KGK +K D  +Y  II  LC   +  +++ LL  M++ G+  + V+ TT++  + K G 
Sbjct: 303 LKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGN 362

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  L DEM   +I   +VT+  +I G+CKSG + EA + F  M   GL P+   YTA
Sbjct: 363 VSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTA 422

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   ++ A ++ ++M ++ + P+   YTAL DG  K+     A  L + M+  G
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y ++V GL + G++++   L  EM   G  PD I   +L+  + + G M +A 
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAH 542

Query: 241 ELQNEMMGRGL 251
           EL   M+ + L
Sbjct: 543 ELLRIMLNKRL 553



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 112/215 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L+ E+K  GL  +  I   ++    K GE  EA  LL  M    +    V +  +I G C
Sbjct: 299 LVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFC 358

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G V  A   F  M    + P++  YT++I G+CK   +  AR +F+EM  + + PD  
Sbjct: 359 KLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEV 418

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YTALIDGY K    KEA ++ N+M + G+  ++  YT+L  GL + G +  A  L HEM
Sbjct: 419 TYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEM 478

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             +G+ P+     +++    + GN+++ ++L  EM
Sbjct: 479 SRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM 513



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 120/232 (51%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           LC   K  ++  LL +M + G   + V    ++  Y + GE  + L L+DE+    ++  
Sbjct: 252 LCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPD 311

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
              +  +I  LCK+G V EA      M  +G+ P+  VYT +I G CK   +  A  LFD
Sbjct: 312 EYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFD 371

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM ++ ++PD   YT++I G  K     EA  + N M   G++ D   YT+L+ G  + G
Sbjct: 372 EMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAG 431

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++EA  + ++M+ +G+ P+ +   +L     + G +D A EL +EM  +GL
Sbjct: 432 EMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGL 483



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 114/220 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  E  E G+  NTV C  ++    + G+  EA +LL +M D      VV++ V++ G C
Sbjct: 229 VFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYC 288

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G + + +     +   GL P+  +Y  +I  LCK   +  A  L   M K  + PD  
Sbjct: 289 RIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNV 348

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT +I G+ K  +   A  L + M    +  D+  YTS++ G+ + G + EAR +F+EM
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + +G+ PDE+   +L+  + + G M EA  + N+M+ +GL
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGL 448


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 131/255 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K +  K D  +Y  ++ G C     E    L ++M  +    +    ++L+ AY +  +
Sbjct: 379 LKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQ 438

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL + + M+   I   VVT  +L+ G    GL+ EA  +  ++  FG+ PN+  Y  
Sbjct: 439 LKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRV 498

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK N       +F +M KR  +PDT  Y+ +IDG++K    +EA  L  +M + G
Sbjct: 499 IINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEG 558

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YTSL+ GL     L E   LF  MIG G+ PD IL  SL+  + +R NM  A+
Sbjct: 559 TKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAAL 618

Query: 241 ELQNEMMGRGLLSGS 255
           E+  EM   GL + S
Sbjct: 619 EIFREMETEGLSADS 633



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 35/291 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N   D   Y ++I+  C   + +++  +   M  +G+  N V CT L+  +   G 
Sbjct: 414 MVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGL 473

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK---------------------------- 92
             EA   LD++    +   + T+ V+I+GLCK                            
Sbjct: 474 IGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSI 533

Query: 93  --SGLVR-----EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
              G V+     EA   + +M D G  PN+  YT+LI+GLC  + +     LF  M    
Sbjct: 534 IIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEG 593

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   YT+LI  Y K  + K AL +   M   G+  D   YT L+ G S+   +  A+
Sbjct: 594 LTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQ 653

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           +   EM+ +G+ P  +    L+  +++ G+  +A+ + N M+  G+   +K
Sbjct: 654 LFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAK 704



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 112/220 (50%), Gaps = 1/220 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  +L  Y  II GLC  +K  D   + ++M + G   +TV+ + ++D + KA +  EA 
Sbjct: 489 VVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAF 548

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  +M+D   +  + T+  LI+GLC    + E +  F  M   GL P+  +YT+LI   
Sbjct: 549 RLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACY 608

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK++ ++ A  +F EM    +  D+  YT LI G+ K  +   A      M   G+   +
Sbjct: 609 CKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTV 668

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL-CI 224
             YT L+ G  + G  ++A V+++ M+  GI PD  L CI
Sbjct: 669 VTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCI 708



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 116/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ +   YGT ++GLC   + + +   L  + + G   N+     ++  +   G+
Sbjct: 239 MEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQ 298

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + D M        V ++ +L+DGLCK G V         M   G+ PN+  Y++
Sbjct: 299 VHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSS 358

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+   +E A  LF  +  +    D   Y+ ++ G  +H   +   +L N M    
Sbjct: 359 LLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHN 418

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y+SL++   R   L+EA  +F  MI  GI P+ + C  L+      G + EA 
Sbjct: 419 FVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAF 478

Query: 241 ELQNEMMGRGLL 252
              +++   G++
Sbjct: 479 LFLDKVRQFGVV 490



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 35/273 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C + +   +  +   MK+ G   +    + L+D   K G+      +L EM 
Sbjct: 286 FNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMA 345

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + I   +V++  L+ GLC++G V  A + F R+ D G   +  VY+ ++ G C+   +E
Sbjct: 346 RNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLE 405

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
              +L+++M   + +PD   Y++LI  Y +H   KEAL +   M   G+  ++   T LV
Sbjct: 406 ICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILV 465

Query: 193 WGLSRCGHLQEA-------------------RV----------------LFHEMIGRGIL 217
            G S  G + EA                   RV                +F +MI RG +
Sbjct: 466 HGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYV 525

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           PD +L   ++    +  ++ EA  L  +M+  G
Sbjct: 526 PDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEG 558



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 2/259 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ K +  +L +   ++ GL   ++    + L  +MK +G + N    + LM  Y    +
Sbjct: 167 VEAKKVGVELQVCNFLLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAK 226

Query: 61  P--SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
               EA  LL EM    +     T+   + GLC++  V+ A ++   +   G   N   +
Sbjct: 227 LCLEEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCF 286

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            A+I G C    + +A  +FD M K   +PD  +Y+ L+DG  K         +   M  
Sbjct: 287 NAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMAR 346

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G+  +L +Y+SL+ GL R G ++ A  LF  +  +G   D I+   +L    +  +++ 
Sbjct: 347 NGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEI 406

Query: 239 AIELQNEMMGRGLLSGSKN 257
             +L N+M+    +  + N
Sbjct: 407 CYDLWNDMVHHNFVPDAYN 425



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 104/225 (46%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E+++ LLSEM+  G+  N     T +    +A +   A + L  +           F  +
Sbjct: 230 EEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAV 289

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I G C  G V +A++ F  M   G  P+V  Y+ L+DGLCK+  +     +  EM +  +
Sbjct: 290 IHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGI 349

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P+  +Y++L+ G  +    + A  L  R+ + G   D   Y+ ++ G  +   L+    
Sbjct: 350 TPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYD 409

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L+++M+    +PD     SL+  +     + EA+E+   M+  G+
Sbjct: 410 LWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGI 454



 Score = 43.9 bits (102), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 42/86 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + + AD  +Y  +I G       + ++L + EM   GLT   V  T L+  YFK G+
Sbjct: 624 METEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGD 683

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVL 86
             +A+ + + ML + I       C+L
Sbjct: 684 EKKAMVMYNSMLQAGIAPDAKLSCIL 709


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 35/283 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y TI+ GLC E    ++  L +EM E G+  +    TTL++ Y K G  ++A++L 
Sbjct: 306 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 365

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M+   ++  VVT+  LIDG CK   + +  + +  M    ++PN   Y  LI+G C  
Sbjct: 366 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 425

Query: 129 NCIERARNLFDEMPKRD-----------------------------------MIPDTTAY 153
            C+  A  L+DEM ++                                    ++PD   Y
Sbjct: 426 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 485

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             LI+G++K E+   A  L N+M   G+  D+  Y  ++ G SR G +QEA ++  +MI 
Sbjct: 486 NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 545

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           RG+ PD     SL+  H  + N+ EA  + +EM+ RG +   K
Sbjct: 546 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 588



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 137/281 (48%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++     +I  LC   K E++K  LS+M+E G+  + V   TL++AY + G   EA 
Sbjct: 93  VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 152

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSG---------------------------LVR- 97
            L+D M    ++  V T+  +I+GLCK+G                           LV  
Sbjct: 153 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 212

Query: 98  -------EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
                  +A   F  MP  G+ P++  ++ALI  L K  C+++A   F +M    + PD 
Sbjct: 213 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 272

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             YT LI G+ ++    EAL +++ M E G  LD+  Y +++ GL +   L EA  LF E
Sbjct: 273 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 332

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  RG+ PD     +L+  + + GNM++A+ L   M+ R L
Sbjct: 333 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 373



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 128/249 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +K  +  Y  II GLC   K+  +K +L EM + G++ +T     L+    +   
Sbjct: 158 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 217

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + DEM    +   +V+F  LI  L K+G + +A+ YF  M + GL P+  +YT 
Sbjct: 218 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 277

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   +  A  + DEM ++  + D   Y  +++G  K +   EA  L   MTE G
Sbjct: 278 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   +T+L+ G S+ G++ +A  LF  MI R + PD +   +L+    +   M++  
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 397

Query: 241 ELQNEMMGR 249
           EL N+M+ R
Sbjct: 398 ELWNDMISR 406



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D  +Y  +I G C      ++  +  EM E G   + V   T+++   K   
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  L  EM +  +     TF  LI+G  K G + +A+  F  M    L P+V  Y  
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK + +E+   L+++M  R + P+  +Y  LI+GY       EA  L + M E G
Sbjct: 383 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 442

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +  +    ++V G  R G+  +A      M+ +GI+PD I   +L+    +  NMD A 
Sbjct: 443 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 502

Query: 241 ELQNEMMGRGLL 252
            L N+M   GLL
Sbjct: 503 ALVNKMENSGLL 514



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 114/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  E+  +G+  N      +++A  K  +     S L +M +  +   VVT+  LI+  C
Sbjct: 84  IYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC 143

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + GL+ EA +    M   GL P V  Y A+I+GLCK     RA+ + DEM K  M PDT 
Sbjct: 144 RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 203

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  L+    ++++  +A  + + M   GV  DL ++++L+  LS+ G L +A   F +M
Sbjct: 204 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 263

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              G+ PD ++   L+      G M EA+++++EM+ +G
Sbjct: 264 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 97/210 (46%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +N ++   L+  Y +A +  E       +    + V++     L+ GL K G V  A + 
Sbjct: 25  SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 84

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  +   G+  NV     +I+ LCK   IE  ++   +M ++ + PD   Y  LI+ Y +
Sbjct: 85  YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 144

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               +EA  L + M+  G+   +  Y +++ GL + G    A+ +  EM+  G+ PD   
Sbjct: 145 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 204

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              LL +     NM +A  + +EM  +G++
Sbjct: 205 YNILLVECCRNDNMMDAERIFDEMPSQGVV 234


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  143 bits (360), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 35/283 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y TI+ GLC E    ++  L +EM E G+  +    TTL++ Y K G  ++A++L 
Sbjct: 463 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 522

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M+   ++  VVT+  LIDG CK   + +  + +  M    ++PN   Y  LI+G C  
Sbjct: 523 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 582

Query: 129 NCIERARNLFDEMPKRD-----------------------------------MIPDTTAY 153
            C+  A  L+DEM ++                                    ++PD   Y
Sbjct: 583 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 642

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             LI+G++K E+   A  L N+M   G+  D+  Y  ++ G SR G +QEA ++  +MI 
Sbjct: 643 NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 702

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           RG+ PD     SL+  H  + N+ EA  + +EM+ RG +   K
Sbjct: 703 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 745



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 137/281 (48%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++     +I  LC   K E++K  LS+M+E G+  + V   TL++AY + G   EA 
Sbjct: 250 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 309

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSG---------------------------LVR- 97
            L+D M    ++  V T+  +I+GLCK+G                           LV  
Sbjct: 310 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 369

Query: 98  -------EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
                  +A   F  MP  G+ P++  ++ALI  L K  C+++A   F +M    + PD 
Sbjct: 370 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 429

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             YT LI G+ ++    EAL +++ M E G  LD+  Y +++ GL +   L EA  LF E
Sbjct: 430 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 489

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  RG+ PD     +L+  + + GNM++A+ L   M+ R L
Sbjct: 490 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 530



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 128/249 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +K  +  Y  II GLC   K+  +K +L EM + G++ +T     L+    +   
Sbjct: 315 MSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDN 374

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + DEM    +   +V+F  LI  L K+G + +A+ YF  M + GL P+  +YT 
Sbjct: 375 MMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTI 434

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   +  A  + DEM ++  + D   Y  +++G  K +   EA  L   MTE G
Sbjct: 435 LIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 494

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   +T+L+ G S+ G++ +A  LF  MI R + PD +   +L+    +   M++  
Sbjct: 495 VFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVN 554

Query: 241 ELQNEMMGR 249
           EL N+M+ R
Sbjct: 555 ELWNDMISR 563



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D  +Y  +I G C      ++  +  EM E G   + V   T+++   K   
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  L  EM +  +     TF  LI+G  K G + +A+  F  M    L P+V  Y  
Sbjct: 480 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 539

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK + +E+   L+++M  R + P+  +Y  LI+GY       EA  L + M E G
Sbjct: 540 LIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKG 599

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +  +    ++V G  R G+  +A      M+ +GI+PD I   +L+    +  NMD A 
Sbjct: 600 FEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 659

Query: 241 ELQNEMMGRGLL 252
            L N+M   GLL
Sbjct: 660 ALVNKMENSGLL 671



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 114/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  E+  +G+  N      +++A  K  +     S L +M +  +   VVT+  LI+  C
Sbjct: 241 IYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYC 300

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + GL+ EA +    M   GL P V  Y A+I+GLCK     RA+ + DEM K  M PDT 
Sbjct: 301 RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 360

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  L+    ++++  +A  + + M   GV  DL ++++L+  LS+ G L +A   F +M
Sbjct: 361 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 420

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              G+ PD ++   L+      G M EA+++++EM+ +G
Sbjct: 421 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 97/210 (46%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +N ++   L+  Y +A +  E       +    + V++     L+ GL K G V  A + 
Sbjct: 182 SNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 241

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  +   G+  NV     +I+ LCK   IE  ++   +M ++ + PD   Y  LI+ Y +
Sbjct: 242 YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 301

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               +EA  L + M+  G+   +  Y +++ GL + G    A+ +  EM+  G+ PD   
Sbjct: 302 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 361

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              LL +     NM +A  + +EM  +G++
Sbjct: 362 YNILLVECCRNDNMMDAERIFDEMPSQGVV 391


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 130/246 (52%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D   Y  +I G C++   + +  L+ EM  N L  +     +L+  + K G    AL 
Sbjct: 427 KYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALE 486

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
             + ML+  I  ++ T  V+ID  C+ G V EA++    M   G+ PN+  Y A+I+ LC
Sbjct: 487 FFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLC 546

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+   ERA  LF  M KR+++P    Y+ LIDG+ K  + ++AL L  RM ++GV  D+ 
Sbjct: 547 KERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMV 606

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           AYT L+  L     + EA  LF +M   G+ PD+I   S++      G+M +A  L NEM
Sbjct: 607 AYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEM 666

Query: 247 MGRGLL 252
           + RG L
Sbjct: 667 LQRGHL 672



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 136/287 (47%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  D   + +++ G C    + ++    + M E G+  +   C  ++DA+ + G 
Sbjct: 456 MVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGR 515

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL+L++EM    I   + T+  +I+ LCK      A++ F  M    + P+V VY+ 
Sbjct: 516 VEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYST 575

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K++  ++A  L+  M K  + PD  AYT LI+         EA NL  +MTE G
Sbjct: 576 LIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENG 635

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-------------------------- 214
           +  D  +YTS++ G  R G +++A  LF+EM+ R                          
Sbjct: 636 MTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIAD 695

Query: 215 ---------GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                    GI PD +    L+  H  RGN+D+A+E+ NEM   G+L
Sbjct: 696 MLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVL 742



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 113/221 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  +L  Y  +I  LC E K E +  L   M +  +  + V+ +TL+D + K   
Sbjct: 526 MQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSN 585

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L   ML   +   +V + +LI+ LC    + EA + F +M + G+ P+   YT+
Sbjct: 586 SQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTS 645

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   + +A  LF+EM +R  +P    YT+L+DGY K      A  L + M   G
Sbjct: 646 VIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKG 705

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D+  Y  L+    R G+L +A  + +EM   G+LPD +
Sbjct: 706 ITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHM 746



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 115/244 (47%), Gaps = 8/244 (3%)

Query: 13  YGTIIWGLC----IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           Y T I+GLC    +ES  +  + L+S    NGL  N      ++    K GE  EAL +L
Sbjct: 293 YSTYIYGLCRVGYVESALDFVRSLISA---NGLV-NVYCYNAIIHGLCKKGELDEALKVL 348

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM    I   V T+ +LI G CK G V + +     M    + P++  Y++L  GLCKK
Sbjct: 349 EEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKK 408

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + + ++F ++       D TAY+ LI G+        A  L   M    +  D + +
Sbjct: 409 RLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNF 468

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SLV G  + G    A   F+ M+  GILP    C  ++  H   G ++EA+ L NEM  
Sbjct: 469 ESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQT 528

Query: 249 RGLL 252
           +G+ 
Sbjct: 529 QGIF 532



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 123/240 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II GLC + + +++  +L EMK  G++ +    + L+  + K G+  + L L++EM 
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S +E ++V++  L  GLCK  L   ++D F  +   G   +   Y+ LI G C +  ++
Sbjct: 388 YSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLD 447

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L +EM + ++ PD + + +L+ G+ K   +  AL   N M E G+   +     ++
Sbjct: 448 SAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVII 507

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               R G ++EA  L +EM  +GI P+     +++ +  +    + A+EL   M+ R +L
Sbjct: 508 DAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVL 567



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 98/195 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+   + +Y T+I G   +S  + + +L + M + G+T + V  T L++       
Sbjct: 561 MLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSR 620

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +L  +M ++ +    +++  +I G C+ G +R+A   F  M   G  P V  YT+
Sbjct: 621 MCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTS 680

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG CK N I+ A  L DEM ++ + PD   Y  LI  + +  +  +AL + N M E G
Sbjct: 681 LVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENG 740

Query: 181 VDLDLNAYTSLVWGL 195
           V  D   Y  L W L
Sbjct: 741 VLPDHMTYMMLEWLL 755



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 6/232 (2%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAG------EPSEALSLLDEMLDSRIEVTVVTFCV 85
           L  EMK  G   N    T +M+ Y K        +  +A  +L+EM  +    TVVT+  
Sbjct: 236 LFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYST 295

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
            I GLC+ G V  A+D+   +       NV  Y A+I GLCKK  ++ A  + +EM    
Sbjct: 296 YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCG 355

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   Y+ LI G+ K    ++ L L   M    ++  L +Y+SL  GL +      + 
Sbjct: 356 ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISL 415

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
            +F ++   G   D+     L+K    +G++D A +L  EM+   L     N
Sbjct: 416 DIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSN 467



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 6/230 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K+    + ++  +I      S  E++  +  + K+ GL  +T  C  L+    +A     
Sbjct: 173 KDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREF 232

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL------VREAIDYFGRMPDFGLHPNVAV 117
             SL +EM  +     V T+ ++++  CK          R+A +    M   G  P V  
Sbjct: 233 LRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVT 292

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y+  I GLC+   +E A +    +   + + +   Y A+I G  K     EAL +   M 
Sbjct: 293 YSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMK 352

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
             G+  D+  Y+ L+ G  + G +++   L  EM    + P  +   SL 
Sbjct: 353 SCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLF 402


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    K ++  Y TII  LC +    D+   LSEM E G+  N     +++  +   G+
Sbjct: 224 MEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQ 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L  EM+   +    VTF +L+DGLCK G+V EA   F  M + G+ P+++ Y A
Sbjct: 284 LNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNA 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C +  +  A+ +F+ M ++   P   +Y  LI+GY K     EA +L   M    
Sbjct: 344 LMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y++L+ GL + G  +EA  LF EM   G  P+ +  + LL    + G++DEA+
Sbjct: 404 LNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEAL 463

Query: 241 ELQNEMMGRGL 251
           +L   M  + L
Sbjct: 464 KLLKSMKEKKL 474



 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 127/246 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D   +  +I GLC E K +++  L +EM + G   N +  TT+++   K G  S A+
Sbjct: 159 IHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAV 218

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M  +  +  VVT+  +ID LCK  LV +A+++   M + G+ PNV  Y +++ G 
Sbjct: 219 DVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGF 278

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    +  A  LF EM  RD++P+T  +T L+DG  K     EA  +   MTE GV+ D+
Sbjct: 279 CNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDI 338

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
           + Y +L+ G      + EA+ +F  MI +G  P       L+  + +   MDEA  L  E
Sbjct: 339 STYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAE 398

Query: 246 MMGRGL 251
           M  + L
Sbjct: 399 MYHKAL 404



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 117/238 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC       +  +  +M++NG   N V  +T++D+  K    ++A+  L EM+
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I   V T+  ++ G C  G + EA   F  M    + PN   +T L+DGLCK+  + 
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVS 320

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR +F+ M ++ + PD + Y AL+DGY       EA  +   M   G     ++Y  L+
Sbjct: 321 EARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILI 380

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + EA+ L  EM  + + PD +   +L++   + G   EA+ L  EM   G
Sbjct: 381 NGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYG 438



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 120/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D+  Y  ++ G C++    ++K +   M   G          L++ Y K+  
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SLL EM    +    VT+  L+ GLC+ G  +EA++ F  M  +G HPN+  Y  
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG CK   ++ A  L   M ++ + P+   YT LI+G       + A  L +++   G
Sbjct: 449 LLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDG 508

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YT ++ GL + G   EA  LF +M   G LP+      +++   +  +   AI
Sbjct: 509 TRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAI 568

Query: 241 ELQNEMMGR 249
            L +EM+G+
Sbjct: 569 RLIDEMVGK 577



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 121/255 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+++  +   +  ++ GLC E    +++L+   M E G+  +      LMD Y     
Sbjct: 294 MVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRL 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + + M+         ++ +LI+G CKS  + EA      M    L+P+   Y+ 
Sbjct: 354 MNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYST 413

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+    + A NLF EM      P+   Y  L+DG+ KH    EAL L   M E  
Sbjct: 414 LMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKK 473

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  YT L+ G+   G L+ A+ LF ++ G G  PD      ++K   + G  DEA 
Sbjct: 474 LEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAY 533

Query: 241 ELQNEMMGRGLLSGS 255
           +L  +M   G L  S
Sbjct: 534 DLFRKMEDDGFLPNS 548



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 117/247 (47%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N +  +  +G  +     + ++     L ++M    +T N      L++   +      +
Sbjct: 88  NPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFS 147

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +S+L +M    I    +TF  LI+GLC  G ++EA++ F  M   G  PNV  YT +I+G
Sbjct: 148 VSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVING 207

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK      A ++F +M +    P+   Y+ +ID   K     +A+   + M E G+  +
Sbjct: 208 LCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPN 267

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y S+V G    G L EA  LF EM+GR ++P+ +    L+    + G + EA  +  
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFE 327

Query: 245 EMMGRGL 251
            M  +G+
Sbjct: 328 TMTEKGV 334



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 120/240 (50%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I  LC  +  + S  +L +M + G+  + +    L++     G+  EA+ L +EM+   
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
            E  V+++  +I+GLCK+G    A+D F +M   G  PNV  Y+ +ID LCK   +  A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
               EM +R + P+   Y +++ G+       EA  L   M    V  +   +T LV GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            + G + EAR++F  M  +G+ PD     +L+  +  +  M+EA ++   M+ +G   G+
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 109/205 (53%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
            + ++ K  + S  +SL ++M   R+   V +  +LI+ LC+   V  ++   G+M   G
Sbjct: 99  FLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLG 158

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           +HP+   + ALI+GLC +  I+ A  LF+EM KR   P+  +YT +I+G  K  +   A+
Sbjct: 159 IHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAV 218

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           ++  +M + G   ++  Y++++  L +   + +A     EM+ RGI P+     S++   
Sbjct: 219 DVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGF 278

Query: 231 YERGNMDEAIELQNEMMGRGLLSGS 255
              G ++EA  L  EM+GR ++  +
Sbjct: 279 CNLGQLNEATRLFKEMVGRDVMPNT 303



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 99/192 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y T++ GLC   + +++  L  EM   G   N V    L+D + K G 
Sbjct: 399 MYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGH 458

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL  M + ++E  +V + +LI+G+  +G +  A + F ++   G  P++  YT 
Sbjct: 459 LDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTV 518

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GL K+   + A +LF +M     +P++ +Y  +I G+L+++    A+ L + M    
Sbjct: 519 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 578

Query: 181 VDLDLNAYTSLV 192
             ++L+ +  L+
Sbjct: 579 FSVNLSTFQMLL 590



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 68/150 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  Y  ++ G C     +++  LL  MKE  L  N V  T L++  F AG+   A  L 
Sbjct: 442 NLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELF 501

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            ++        + T+ V+I GL K GL  EA D F +M D G  PN   Y  +I G  + 
Sbjct: 502 SKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQN 561

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID 158
                A  L DEM  +    + + +  L+D
Sbjct: 562 QDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 92/189 (48%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL+    M+      +VV F   +    K       +    +M  F +  NV     LI
Sbjct: 76  DALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILI 135

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC+ N ++ + ++  +M K  + PD   + ALI+G       KEA+ L N M + G +
Sbjct: 136 NCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHE 195

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++ +YT+++ GL + G+   A  +F +M   G  P+ +   +++    +   +++A+E 
Sbjct: 196 PNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEF 255

Query: 243 QNEMMGRGL 251
            +EM+ RG+
Sbjct: 256 LSEMVERGI 264



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 123 DGLCKKN----CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           DG    N    C++ A   F  M + +  P    +   +  + K + +   ++L N+M  
Sbjct: 62  DGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDL 121

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             V  ++ +   L+  L R  H+  +  +  +M   GI PD I   +L+      G + E
Sbjct: 122 FRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181

Query: 239 AIELQNEMMGRG 250
           A+EL NEM+ RG
Sbjct: 182 AVELFNEMVKRG 193



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 72/155 (46%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           V +A+  F RM      P+V  +   +    KK       +L ++M    +  +  +   
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI+   +      ++++  +M ++G+  D   + +L+ GL   G ++EA  LF+EM+ RG
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             P+ I   +++    + GN   A+++  +M   G
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNG 228



 Score = 45.4 bits (106), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 45/86 (52%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G   + D+  Y  +I GL  E   +++  L  +M+++G   N+     ++  + +  + S
Sbjct: 506 GDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSS 565

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLID 88
            A+ L+DEM+  R  V + TF +L+D
Sbjct: 566 TAIRLIDEMVGKRFSVNLSTFQMLLD 591


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 127/256 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D     T+I G C +     +  L   M    L  + V   TLMD + K GE
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  +M+   I  + ++F +LI+G C  GLV EA   +  M + G+ P +     
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G  +   + +A +  + M    + PD   Y  LI+ ++K E+F  A  L N M E G
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 639

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +L  Y +++ G SR G +QEA ++ H+MI +GI PD+    SL+  +  + NM EA 
Sbjct: 640 LLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAF 699

Query: 241 ELQNEMMGRGLLSGSK 256
            + +EM+ RG +   K
Sbjct: 700 RVHDEMLQRGFVPDDK 715



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 35/271 (12%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  LC + K ++  + LSEM+E G+ A+ V   TL++AY + G  SEA  L+D M    
Sbjct: 230 MVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKG 289

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++  + T+  LI+GLCK G    A      M   GL PN A +  ++   C+K  +  A 
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAE 349

Query: 136 NLFDEMPKR-----------------------------------DMIPDTTAYTALIDGY 160
            +F+EM +R                                    ++PDT  YT LI+GY
Sbjct: 350 RVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGY 409

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            +++    AL ++N M E G  +D+  Y +L+ GL R   L +A  LF EM+ RG+ PD 
Sbjct: 410 CRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDF 469

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               +L+  + + GNM +A+ L   M  R L
Sbjct: 470 YTLTTLIHGYCKDGNMTKALSLFETMTLRSL 500



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG  +  D  +Y  +I G C       +  + +EM E G   + V   TL++   +   
Sbjct: 390 MKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKM 449

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  EM++  +     T   LI G CK G + +A+  F  M    L P+V  Y  
Sbjct: 450 LDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNT 509

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG CK   +E+A+ L+ +M  R++ P   +++ LI+G+       EA  L + M E G
Sbjct: 510 LMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKG 569

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   L    +++ G  R G+L +A    + MI  G+ PD I   +L+    +  N D A 
Sbjct: 570 IKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAF 629

Query: 241 ELQNEMMGRGLL 252
            L N M  RGLL
Sbjct: 630 FLINNMEERGLL 641



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 125/249 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +K  L  Y  +I GLC E  +E +K +L EM   GL  N      ++    +  +
Sbjct: 285 MAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKED 344

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + +EML   +   +++F  ++    ++G +  A+ YF +M   GL P+  +YT 
Sbjct: 345 VWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 404

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+ + +  A  + +EM +R  + D   Y  L++G  + +   +A  L   M E G
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D    T+L+ G  + G++ +A  LF  M  R + PD +   +L+    + G M++A 
Sbjct: 465 VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAK 524

Query: 241 ELQNEMMGR 249
           EL  +M+ R
Sbjct: 525 ELWYDMISR 533



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL  + +I+       +   +     +MK  GL  +TVI T L++ Y +  +
Sbjct: 355 MLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDD 414

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL + +EM++    + VVT+  L++GLC+  ++ +A + F  M + G+ P+    T 
Sbjct: 415 VSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTT 474

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   + +A +LF+ M  R + PD   Y  L+DG+ K    ++A  L   M    
Sbjct: 475 LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISRE 534

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +     +++ L+ G    G + EA  L+ EM  +GI P  + C +++K +   GN+ +A 
Sbjct: 535 IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAN 594

Query: 241 ELQNEMMGRGL 251
           +  N M+  G+
Sbjct: 595 DFLNTMISEGV 605



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 109/213 (51%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           ++G   N      +++A  K G+       L EM +  +   +VT+  L++  C+ GLV 
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           EA      M   GL P +  Y ALI+GLCK+   ERA+ + DEM    + P+   +  ++
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
               + E   EA  + N M + GV  DL +++S+V   SR G L  A   F +M G G++
Sbjct: 337 VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLV 396

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           PD ++   L+  +    ++  A++++NEM+ RG
Sbjct: 397 PDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 112/243 (46%), Gaps = 5/243 (2%)

Query: 15  TIIWGLCIESKFEDSKL-----LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
            +++ L I +  +  KL         +++ G   +   C  L+ A  K G    A  + +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           + + S   V V T  ++++ LCK G +     Y   M + G++ ++  Y  L++  C++ 
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +  A  L D M  + + P    Y ALI+G  K  S++ A  + + M  VG+  +   + 
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            ++    R   + EA  +F+EM+ RG++PD I   S++      G +  A+    +M G 
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 250 GLL 252
           GL+
Sbjct: 394 GLV 396



 Score = 37.0 bits (84), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 55/140 (39%)

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           V V+  LI    +   +      F  + KR       A  AL+   +K      A  +  
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
              + G  +++     +V  L + G L    V   EM  +G+  D +   +L+  +  RG
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 235 NMDEAIELQNEMMGRGLLSG 254
            + EA  L + M G+GL  G
Sbjct: 274 LVSEAFGLVDCMAGKGLKPG 293


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 134/250 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I AD+  Y T+I+G CI SK +++  LL+EM    +  N      L+DA  K G+
Sbjct: 225 MTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L  ML + ++  V+T+  L+DG      +++A   F  M   G+ P+V  YT 
Sbjct: 285 VKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTI 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A NLF EM +++M+P    Y++LIDG  K        +L + M + G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y SL+ GL + GHL  A  LF++M  +GI P       LL    + G + +A 
Sbjct: 405 IPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQ 464

Query: 241 ELQNEMMGRG 250
           E   +++ +G
Sbjct: 465 EAFQDLLTKG 474



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 128/247 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T++ G  +  + + ++ + + M   G+T +    T L++ + K     EAL
Sbjct: 300 VKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEAL 359

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM    +   +VT+  LIDGLCKSG +    D    M D G+  NV  Y +LIDGL
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGL 419

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   ++RA  LF++M  + + P +  +T L+DG  K    K+A      +   G  LD+
Sbjct: 420 CKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDV 479

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  ++ G  + G L+EA  +  +M   G +P+ +    ++   +++   D+A +L  +
Sbjct: 480 YKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQ 539

Query: 246 MMGRGLL 252
           M+ RGLL
Sbjct: 540 MICRGLL 546



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 117/243 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ DL     +I   C   +      +L+++ + G   +T+  TTL+      G+ ++
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNK 147

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL   D++L   I+   V++  LI+G+CK G  R AI    ++      PNV +Y  +ID
Sbjct: 148 ALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIID 207

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK   +  A  LF EM  + +  D   YT LI G+      KEA+ L N M    ++ 
Sbjct: 208 ALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINP 267

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y  LV  L + G ++EA+ +   M+   + PD I   +L+  ++    + +A  + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVF 327

Query: 244 NEM 246
           N M
Sbjct: 328 NAM 330



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 124/274 (45%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GLC++ +   +     ++   G+  + V   TL++   K G+   A+ L+ ++ 
Sbjct: 132 FTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID 191

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG---------------------- 110
               +  V  +  +ID LCK  LV EA   F  M   G                      
Sbjct: 192 GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLK 251

Query: 111 -------------LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                        ++PNV  Y  L+D LCK+  ++ A+N+   M K  + PD   Y+ L+
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLM 311

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DGY      K+A ++ N M+ +GV  D+++YT L+ G  +   + EA  LF EM  + ++
Sbjct: 312 DGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P  +   SL+    + G +    +L +EM  RG+
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGI 405



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 90/176 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+   +  Y ++I GLC   +      L+ EM++ G+ AN +   +L+D   K G 
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGH 424

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A++L ++M D  I     TF +L+DGLCK G +++A + F  +   G H +V  Y  
Sbjct: 425 LDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNV 484

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +I+G CK+  +E A  +  +M +   +P+   +  +I+   K +   +A  L  +M
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 92/197 (46%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++D++ K    S A+SL   +    I+  ++T  +LI+  C  G +        ++   G
Sbjct: 65  ILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+   +T LI GLC K  + +A +  D++  + +  D  +Y  LI+G  K    + A+
Sbjct: 125 YQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAI 184

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L  ++       ++  Y +++  L +   + EA  LF EM  +GI  D +   +L+   
Sbjct: 185 KLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGF 244

Query: 231 YERGNMDEAIELQNEMM 247
                + EAI L NEM+
Sbjct: 245 CIASKLKEAIGLLNEMV 261



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 75/147 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I A++  Y ++I GLC     + +  L ++MK+ G+   +   T L+D   K G 
Sbjct: 400 MRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGR 459

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A     ++L     + V  + V+I+G CK GL+ EA+    +M + G  PN   +  
Sbjct: 460 LKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDI 519

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI 147
           +I+ L KK+  ++A  L  +M  R ++
Sbjct: 520 IINALFKKDENDKAEKLLRQMICRGLL 546



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 35/191 (18%)

Query: 96  VREAIDYFGRM------PDF-----------------------------GLHPNVAVYTA 120
           V +A+  F RM      P                               G+ P++     
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  C    I    ++  ++ KR   P T  +T LI G        +AL+  +++   G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D  +Y +L+ G+ + G  + A  L  ++ GR   P+  +  +++    +   + EA 
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 241 ELQNEMMGRGL 251
            L +EM  +G+
Sbjct: 220 GLFSEMTAKGI 230


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 128/246 (52%), Gaps = 1/246 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +A+   Y T++ GL    + ED+ ++L +M++ G   + V   TL+D +FK     EA+ 
Sbjct: 275 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 334

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL EML++    +VVT+  L  GLC+SG   EA++    M   G  PN   Y++++DGLC
Sbjct: 335 LLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC 394

Query: 127 KKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           K   +  A   F++M + +++ P   AY+ALIDG  K     EA     RM   G   D+
Sbjct: 395 KAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDV 454

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             ++ L+ GL   G +     LF  M  RG +PD +   +L+ +      +DEA +L  +
Sbjct: 455 VTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQ 514

Query: 246 MMGRGL 251
           M   GL
Sbjct: 515 MRSDGL 520



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 126/241 (52%), Gaps = 2/241 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC + + +    LL EM   G   N V   TL++A    G   EA SLL++M 
Sbjct: 104 YSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMA 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR--MPDFGLHPNVAVYTALIDGLCKKNC 130
            +     ++TF ++I GLCK G +  A        M + GL P+V  + +++DGLCK+  
Sbjct: 164 ANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQR 223

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           I  A N+F    +R   P+   Y+ LIDG  K     EAL L  +M E+G   +   Y++
Sbjct: 224 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 283

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +V GL + G +++A V+  +M   G LPD +   +L+   ++R  + EA+ L  EM+  G
Sbjct: 284 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343

Query: 251 L 251
            
Sbjct: 344 F 344



 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 126/249 (50%), Gaps = 3/249 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +  + ++  Y T+I GL   +K +++  LL++M E G  ANTV  +T++D   K G   +
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 296

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ +L +M D+      VT+  LIDG  K   +REA+     M + G HP+V  YT L  
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 356

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT--EVGV 181
           GLC+    + A  + D M  R   P+   Y++++DG  K     EAL    +M   EV V
Sbjct: 357 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV-V 415

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
              + AY++L+ GL + G + EA      MI  G +PD +    L+    + G +D  +E
Sbjct: 416 APHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 475

Query: 242 LQNEMMGRG 250
           L   M  RG
Sbjct: 476 LFRGMAERG 484



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 2/242 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM--KENGLTANTVICTTLMDAYFKA 58
           M       +L  +G II GLC E + E +  ++ EM   E+GL+ + +   +++D   K 
Sbjct: 162 MAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKE 221

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
               +A ++    L+      VVT+  LIDGL K   + EA+    +M + G   N   Y
Sbjct: 222 QRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTY 281

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + ++DGL K   +E A  +  +M     +PD   Y  LIDG+ K +  +EA+ L   M E
Sbjct: 282 STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE 341

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G    +  YT+L  GL R G   EA  +   M  RG  P+ I   S++    + G + E
Sbjct: 342 AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE 401

Query: 239 AI 240
           A+
Sbjct: 402 AL 403



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+    +   Y T++  L  + + +++  LL +M  NG     +    ++    K GE
Sbjct: 127 MAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGE 186

Query: 61  PSEALSLLDEM--LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
              A  ++DEM  ++S +   V+TF  ++DGLCK   + +A + F R  + G  PNV  Y
Sbjct: 187 IEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTY 246

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + LIDGL K   ++ A  L  +M +     +T  Y+ ++DG LK    ++A+ +  +M +
Sbjct: 247 STLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD 306

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G   D   Y +L+ G  +   L+EA  L  EM+  G  P  +   +L       G  DE
Sbjct: 307 AGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDE 366

Query: 239 AIELQNEMMGRG 250
           A+E+ + M  RG
Sbjct: 367 AVEILDYMAARG 378



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 1/246 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  + +++ GLC E +  D+  +     E G   N V  +TL+D   K  +  EAL
Sbjct: 204 LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEAL 263

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL +M++       VT+  ++DGL K G + +A+    +M D G  P+   Y  LIDG 
Sbjct: 264 QLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGF 323

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K+  +  A  L  EM +    P    YT L  G  +   F EA+ + + M   G   + 
Sbjct: 324 FKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNA 383

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS-LLKKHYERGNMDEAIELQN 244
             Y+S+V GL + G + EA   F +M    ++   ++  S L+    + G +DEA E   
Sbjct: 384 ITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLE 443

Query: 245 EMMGRG 250
            M+  G
Sbjct: 444 RMIRAG 449



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 1/199 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+  GLC   +F+++  +L  M   G   N +  ++++D   KAG  +EAL   ++M 
Sbjct: 351 YTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMA 410

Query: 73  -DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            D  +   V+ +  LIDGLCK+G + EA ++  RM   G  P+V  ++ LI+GLC    I
Sbjct: 411 RDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 470

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +    LF  M +R  +PD   Y  L+D   +     EA +L  +M   G+  D +   ++
Sbjct: 471 DTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTM 530

Query: 192 VWGLSRCGHLQEARVLFHE 210
           + GL      ++A+ +  E
Sbjct: 531 IHGLLEVNRDEDAKRIQDE 549



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 3/215 (1%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I GLC   K + +  L  +M +  +  + V    L+D   K     EA  L +E     
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCIERA 134
              TVVT+  +IDGLCK G +  A+  +  M   FG  P V  Y+ LIDGLC+ + +++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L +EM  R   P+   Y  L++  L     KEA +L  +M   G   +L  +  ++ G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 195 LSRCGHLQEARVLFHE--MIGRGILPDEILCISLL 227
           L + G ++ A  +  E  MI  G+ PD I   S+L
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVL 215



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 93/198 (46%), Gaps = 1/198 (0%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++D   K+ +  +A++L  +M+D  I   VVT+  LIDGL K   V+EA D F      G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEA 169
            HP V  Y  +IDGLCK   IE A  L+D+M       P    Y+ LIDG  +     + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M   G   +   Y +LV  L   G  +EA  L  +M   G  P+ I    ++K 
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 230 HYERGNMDEAIELQNEMM 247
             + G ++ A  + +EM 
Sbjct: 181 LCKEGEIEAAFRVVDEMF 198


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 123/240 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC   + +++  L  +M+EN    + V  T LMD   K     EA  +L
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M D      V+T+  LIDGLCK+G VR+A + F RM   G+ PNV  Y +LI G C  
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A  L +EM     +PD   Y  LIDG  K     EA  L   M     + D+  Y
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 360

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + L+ G  +   +  AR LF +M+ + +LPD +   +L++ +   G +D+A  L  EM+ 
Sbjct: 361 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA 420



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 129/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  ++  Y T+I G C ++K + +  L  +M ENG   N V   TL+    + G 
Sbjct: 68  MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 127

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LLDEM +  ++    ++  L+ GLCK+G +  A+  F    +    P+V  Y+ 
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK   ++ A  LF++M +    PD   +TAL+DG  K +  +EA  +   M +  
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y+SL+ GL + G +++A+ +F  MI RGI P+ +   SL+        +D A+
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307

Query: 241 ELQNEMMGRGLL 252
            L  EM   G L
Sbjct: 308 LLMEEMTATGCL 319



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N   ++  Y ++I GLC   +  D++ +   M   G+  N V   +L+  +     
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L++EM  +     ++T+  LIDGLCK+G   EA   FG M     +P+V  Y+ 
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   I+ AR LFD+M K+ ++PD   ++ L++GY       +A  L   M    
Sbjct: 363 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 422

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YTSLV G  + G + EAR +   M  RG  P+ +   +L+      G    A 
Sbjct: 423 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 482

Query: 241 ELQNEMMGRGL 251
           +L  EM+G G+
Sbjct: 483 KLLEEMVGNGV 493



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K    +   Y  +I G C   K   + LLL EMKE+GL  N V  +T++  + +  +
Sbjct: 33  MKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTK 92

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  +M+++     +VT+  L+ GLC++GL+ EA +    M + GL P+   Y  
Sbjct: 93  VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDT 152

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLCK   I+ A  +F++    D  PD  AY+ LI G  K     EA  L  +M E  
Sbjct: 153 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENS 212

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+  +T+L+ GL +   LQEA+ +   M  R   P+ I   SL+    + G + +A 
Sbjct: 213 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 272

Query: 241 ELQNEMMGRGL 251
           E+   M+ RG+
Sbjct: 273 EVFKRMIVRGI 283



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 122/241 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  Y T++ GLC     +++  LL EM+E GL  +     TLM    K G+   AL + 
Sbjct: 111 NLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF 170

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++  +      VV +  LI GLCK+G + EA   F +M +    P+V  +TAL+DGLCK 
Sbjct: 171 EDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKG 230

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A+ + + M  R+  P+   Y++LIDG  K    ++A  +  RM   G++ ++  Y
Sbjct: 231 DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTY 290

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SL+ G      +  A +L  EM   G LPD I   +L+    + G   EA  L  +M  
Sbjct: 291 NSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA 350

Query: 249 R 249
           +
Sbjct: 351 K 351



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 123/253 (48%), Gaps = 2/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M+ + ++ D   Y T++ GLC   K  D  L + E   NG    + V  +TL+    K G
Sbjct: 138 MRERGLQPDKFSYDTLMAGLCKTGKI-DMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG 196

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA  L ++M ++  E  VVTF  L+DGLCK   ++EA      M D    PNV  Y+
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 256

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LIDGLCK   +  A+ +F  M  R + P+   Y +LI G+        AL L   MT  
Sbjct: 257 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 316

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  Y +L+ GL + G   EA  LF +M  +   PD I    L+    +   +D A
Sbjct: 317 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 376

Query: 240 IELQNEMMGRGLL 252
             L ++M+ + +L
Sbjct: 377 RTLFDDMLKQAVL 389



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 113/236 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I+ ++  Y ++I G C+ +  + + LL+ EM   G   + +   TL+D   K G   E
Sbjct: 281 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 340

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L  +M        V+T+  LI G CK   +  A   F  M    + P+V  ++ L++
Sbjct: 341 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 400

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C    ++ A  L +EM   D  PD   YT+L+DG+ K     EA  +  RM + G   
Sbjct: 401 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 460

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           ++  YT+L+    R G    A  L  EM+G G+ P+ I   SL+      G+++EA
Sbjct: 461 NVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 516



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K    D+  Y  +I G C   + + ++ L  +M +  +  + V  +TL++ Y  AG 
Sbjct: 348 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 407

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL+EM+ S     V T+  L+DG CK G + EA     RM   G  PNV  YTA
Sbjct: 408 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 467

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LID  C+      A  L +EM    + P+   Y +LI G+      +EA  +  R+  + 
Sbjct: 468 LIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDE 527

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
               D+ AY  ++ GL R G +  A  L   +   G  P   + ++L++   +   + +A
Sbjct: 528 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 587

Query: 240 IELQNEM 246
           +E+  EM
Sbjct: 588 MEVLEEM 594



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 112/237 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC  ++  ++    ++MK+ G   N      L++ + K  +   A  LL EM 
Sbjct: 10  WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 69

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S +   VVT+  +I G C+   V  A   F +M + G  PN+  Y  L+ GLC+   ++
Sbjct: 70  ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 129

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L DEM +R + PD  +Y  L+ G  K      AL +    +      D+ AY++L+
Sbjct: 130 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 189

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            GL + G L EA  LF +M      PD +   +L+    +   + EA ++   M  R
Sbjct: 190 AGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 246



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 96/203 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC   +  ++  L  +MK      + +  + L+  + K      A +L 
Sbjct: 321 DIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLF 380

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D+ML   +   VVTF  L++G C +GLV +A      M      P+V  YT+L+DG CK 
Sbjct: 381 DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKV 440

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  AR +   M KR   P+   YTALID + +      A  L   M   GV  ++  Y
Sbjct: 441 GRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITY 500

Query: 189 TSLVWGLSRCGHLQEARVLFHEM 211
            SL+ G    G L+EAR +   +
Sbjct: 501 RSLIGGFCGTGDLEEARKMLERL 523



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 88/166 (53%)

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
           E  V+T+ ++IDGLCK+  + EA  YF +M   G  PN   Y  LI+G CK + + RA  
Sbjct: 4   EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           L  EM +  + P+   Y+ +I G+ +      A  L  +M E G   +L  Y +L+ GL 
Sbjct: 64  LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           R G + EA  L  EM  RG+ PD+    +L+    + G +D A+++
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 169



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 2/215 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   +   D+  Y +++ G C   +  +++ +L  M + G   N V  T L+DA+ +AG+
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYT 119
           P+ A  LL+EM+ + ++  V+T+  LI G C +G + EA     R+  D     ++  Y 
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYR 537

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT-E 178
            ++DGLC+   +  A  L + + +    P    Y ALI G  + +   +A+ +   MT  
Sbjct: 538 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 597

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
                +  AY +++  L+R G  +EA  L  E++G
Sbjct: 598 RKSRPNAEAYEAVIQELAREGRHEEANALADELLG 632



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           N +  T ++D   KA    EA +   +M          T+ VLI+G CK   V  A    
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
             M + GL PNV  Y+ +I G C++  ++ A  LF +M +   +P+   Y  L+ G  ++
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               EA  L + M E G+  D  +Y +L+ GL + G +  A  +F +       PD +  
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 224 ISLLKKHYERGNMDEAIELQNEM 246
            +L+    + G +DEA +L  +M
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKM 208



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 72/138 (52%)

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           NV  +T +IDGLCK N +  A   F +M K+  +P+   Y  LI+G+ K      A  L 
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
             M E G+  ++  Y++++ G  R   +  A  LF +M+  G +P+ +   +LL      
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 234 GNMDEAIELQNEMMGRGL 251
           G MDEA EL +EM  RGL
Sbjct: 126 GLMDEAYELLDEMRERGL 143


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 141/287 (49%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI  D+  Y  +I  LC E K +++K LL  M + G+  N V  +TLMD Y   GE
Sbjct: 333 MTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGE 392

Query: 61  -----------------PS------------------EALSLLDEMLDSRIEVTVVTFCV 85
                            PS                  EA++LL EML   +    VT+  
Sbjct: 393 VHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNS 452

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LIDGLCKSG +  A+D    +   G   +V  YT+L+DGLCK   +++A  LF +M +R 
Sbjct: 453 LIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG 512

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+   YTALIDG  K    K A  L   +   G  +D+  Y  ++ GL + G L EA 
Sbjct: 513 IQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEAL 572

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +  +M   G +PD +    +++  +E+   D+A +L +EM+ +GLL
Sbjct: 573 AMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 83/248 (33%), Positives = 129/248 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           ++ + D+ +Y TII GLC +    ++    +EM   G+  + +  +TL+  +  AG+   
Sbjct: 266 RSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMG 325

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A SLL+EM    I   V T+ +LID LCK G ++EA +  G M   G+ PNV  Y+ L+D
Sbjct: 326 AFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMD 385

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C    +  A+ +F  M + ++ P   +Y  +I+G  K +S  EA+NL   M    V  
Sbjct: 386 GYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVP 445

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y SL+ GL + G +  A  L  E+  RG   D I   SLL    +  N+D+AI L 
Sbjct: 446 NTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALF 505

Query: 244 NEMMGRGL 251
            +M  RG+
Sbjct: 506 MKMKERGI 513



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 127/250 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y T+I G C+  +   +  LL+EM    +  +    T L+DA  K G+
Sbjct: 298 MNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGK 357

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +LL  M    ++  VVT+  L+DG C  G V  A   F  M    ++P+V  Y  
Sbjct: 358 LKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNI 417

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK   ++ A NL  EM  ++++P+T  Y +LIDG  K      AL+L   +   G
Sbjct: 418 MINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YTSL+ GL +  +L +A  LF +M  RGI P++    +L+    +   +  A 
Sbjct: 478 QPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQ 537

Query: 241 ELQNEMMGRG 250
           +L   ++ +G
Sbjct: 538 KLFQHILVKG 547



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 122/241 (50%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T++ GLC++ + + S     ++   G   N V   TL++   K GE   A+ LL  + D 
Sbjct: 207 TLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDR 266

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
                VV +  +IDGLCK  LV EA D++  M   G+ P+V  Y+ LI G C    +  A
Sbjct: 267 STRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGA 326

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            +L +EM  +++ PD   YT LID   K    KEA NL   MT+ GV  ++  Y++L+ G
Sbjct: 327 FSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDG 386

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
               G +  A+ +FH M+   + P       ++    +  ++DEA+ L  EM+ + ++  
Sbjct: 387 YCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPN 446

Query: 255 S 255
           +
Sbjct: 447 T 447



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 122/247 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ DL     +I   C   +   S  +L ++ + G   NT+I TTLM      GE
Sbjct: 158 MEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGE 217

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             ++L   D+++    ++  V++  L++GLCK G  R AI     + D    P+V +Y  
Sbjct: 218 VKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNT 277

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   +  A + + EM  R + PD   Y+ LI G+        A +L N MT   
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN 337

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  YT L+  L + G L+EA+ L   M   G+ P+ +   +L+  +   G +  A 
Sbjct: 338 INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAK 397

Query: 241 ELQNEMM 247
           ++ + M+
Sbjct: 398 QIFHAMV 404



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 105/239 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G I+  L     F  +  L  +M+  G+  + V  + L++ +   G+ + + S+L ++L
Sbjct: 135 FGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKIL 194

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +   +    L+ GLC  G V++++ +  ++   G   N   Y  L++GLCK     
Sbjct: 195 KLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETR 254

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   +  R   PD   Y  +IDG  K +   EA +    M   G+  D+  Y++L+
Sbjct: 255 CAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLI 314

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G    G L  A  L +EM  + I PD      L+    + G + EA  L   M   G+
Sbjct: 315 CGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV 373



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 6/204 (2%)

Query: 55  YFKAGEPS------EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           YF +  PS      +A+S  + ML  R   +++ F  ++  L K      AI    +M  
Sbjct: 101 YFHSQPPSIHDVVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEV 160

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            G+ P++   + LI+  C    +  + ++  ++ K    P+T   T L+ G       K+
Sbjct: 161 KGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKK 220

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           +L+  +++   G  ++  +Y +L+ GL + G  + A  L   +  R   PD ++  +++ 
Sbjct: 221 SLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIID 280

Query: 229 KHYERGNMDEAIELQNEMMGRGLL 252
              +   ++EA +   EM  RG+ 
Sbjct: 281 GLCKDKLVNEAYDFYTEMNSRGIF 304


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 128/239 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C +   + +  + S+M + GL  N +  + LMD YFK G+   A  + D M+
Sbjct: 491 YNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMV 550

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I  +  T+ + I+GLCK G   EA D   +  + G  P    Y +++DG  K+  + 
Sbjct: 551 DENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVS 610

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   + EM +  + P+   YT LI+G+ K+ +   AL ++N M   G++LD+ AY +L+
Sbjct: 611 SALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALI 670

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   ++ A  LF E++  G+ P+ ++  SL+  +    NM+ A+ LQ  M+G G+
Sbjct: 671 DGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGI 729



 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 136/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI      Y   I GLC   +  +++ +L +  E G     +   ++MD + K G 
Sbjct: 549 MVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGS 608

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL+   EM +S +   V+T+  LI+G CK+     A+     M + GL  ++A Y A
Sbjct: 609 VSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGA 668

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CKK  IE A  LF E+    + P++  Y +LI GY    + + ALNL+ RM   G
Sbjct: 669 LIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEG 728

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI---------------- 224
           +  DL  YT+L+ GL + G L  A  L+ EM  +GI+PD I+                  
Sbjct: 729 ISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQ 788

Query: 225 -------------------SLLKKHYERGNMDEAIELQNEMMGRGL 251
                              +L+  H++ GN+ EA  L NEM+ +GL
Sbjct: 789 KILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGL 834



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 131/251 (52%), Gaps = 3/251 (1%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K + +K D   Y  +I   C     E +  LL +M++ G   +    T+++ A  K G  
Sbjct: 271 KSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNM 330

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EAL L DEM+   +++ VV    L+ G CK   +  A+++F +M + G  PN   Y  L
Sbjct: 331 VEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVL 390

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+  CK   + +A +L+ +M  +++ P      +LI G+LK ES +EA  L +    V  
Sbjct: 391 IEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE--AVAC 448

Query: 182 DL-DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           D+ ++  Y SL+  L + G + EA  L+ +M+ +G+ P ++   S++  H  +GN+D A 
Sbjct: 449 DIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAA 508

Query: 241 ELQNEMMGRGL 251
            + ++M+  GL
Sbjct: 509 SVFSDMLDCGL 519



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 106/200 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K ++ D+  YG +I G C +   E +  L SE+ + GL+ N+VI  +L+  Y     
Sbjct: 654 MRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNN 713

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL+L   ML   I   + T+  LIDGL K G +  A+D +  M   G+ P++ +YT 
Sbjct: 714 MEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTV 773

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC K  +E A+ +  EM +  + P+   Y ALI G+ K  + +EA  L N M + G
Sbjct: 774 LINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKG 833

Query: 181 VDLDLNAYTSLVWGLSRCGH 200
           +  +   Y  L+ G  + G+
Sbjct: 834 LTPNDTTYDILINGKIKGGN 853



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 35/258 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +I+ G   E     +     EM E+G++ N +  TTL++ + K      AL + +EM 
Sbjct: 596 YNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMR 655

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-------------- 118
           +  +E+ +  +  LIDG CK   +  A   F  + D GL PN  +Y              
Sbjct: 656 NKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNME 715

Query: 119 ---------------------TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                T LIDGL K+  +  A +L+ EM  + +IPD   YT LI
Sbjct: 716 AALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLI 775

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +G       + A  +   M    +  ++  Y +L+ G  + G+LQEA  L +EM+ +G+ 
Sbjct: 776 NGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLT 835

Query: 218 PDEILCISLLKKHYERGN 235
           P++     L+    + GN
Sbjct: 836 PNDTTYDILINGKIKGGN 853



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 106/244 (43%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           +D+ +Y  ++      +K  D+    + + E+ +         L+ A  K     EA  +
Sbjct: 172 SDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREV 231

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            ++M+   +     T  +++    K     EA  +F      G+  + A Y+ +I   CK
Sbjct: 232 YEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCK 291

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +E A  L  +M  +  +P    +T++I   +K  +  EAL LK+ M   GV +++  
Sbjct: 292 NLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVV 351

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            T+LV G  +   L  A   F +M   G  P+ +    L++   + GNM +A +L  +M 
Sbjct: 352 ATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMK 411

Query: 248 GRGL 251
            + +
Sbjct: 412 NKNI 415



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 94/221 (42%)

Query: 28  DSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLI 87
           +++ +  +M   G+  +      +M A  K     EA     E     +++    + ++I
Sbjct: 227 EAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVI 286

Query: 88  DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
              CK+  V  A      M D G  P+   +T++I    K+  +  A  L DEM    + 
Sbjct: 287 QAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQ 346

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
            +    T L+ GY K +    AL   ++M E G   +   Y  L+    + G++ +A  L
Sbjct: 347 MNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDL 406

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + +M  + I P   +  SL++   +  + +EA +L +E + 
Sbjct: 407 YTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVA 447



 Score = 40.8 bits (94), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 98/224 (43%), Gaps = 24/224 (10%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV-TVVTFCVLIDGL 90
           L     ++ + A T +  TL+ +Y +  +P  AL+   ++  +R  V ++ + CVL+  L
Sbjct: 72  LTKPASQDSVLARTNVIDTLL-SYKR--DPYSALTYFKQLECTRGFVRSLDSLCVLLHIL 128

Query: 91  CKSG-LVREAIDYFGRM--PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
            +S   +++A +   R    D G  PN+     L+D            +      + D  
Sbjct: 129 TRSSETLKQAQNLLNRFISGDSGPMPNI-----LVD------------HFIGSTKRFDFD 171

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
            D   Y  L++ Y+K     +A+   NR+ E  +   +     L+  L +   + EAR +
Sbjct: 172 SDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREV 231

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + +M+ +G+  D      +++ + +  N +EA +   E   RG+
Sbjct: 232 YEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGV 275


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 137/262 (52%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +L  + T+I G C   + +D   LL EM E GL A+T    TL+  ++  G+
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDF 109
            + AL LL EM+ S +   +VT   L+DGLC +G +++A++ F  M           P  
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y+++IDG  K     EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             + + M       ++  +T+L+ G  + G + +   LF EM  RGI+ + I  I+L+  
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ A+++  EM+  G+
Sbjct: 626 FRKVGNINGALDIFQEMISSGV 647



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            +I  ++ +Y  II  LC + +  D++ L +EM+E G+  +     +++  +  +G  S+
Sbjct: 249 SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSD 308

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EML+ +I   VVT+  LI+   K G   EA + +  M   G+ PN   Y+++ID
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK+N ++ A ++F  M  +   P+   +  LIDGY   +   + + L + MTE G+  
Sbjct: 369 GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA 428

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           D   Y +L+ G    G L  A  L  EMI  G+ PD + C +LL    + G + +A+E+
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 127/256 (49%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  +  +I   C  SK   +     ++ + GL  + V   TL+        
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL+L  +M ++     VVTF  L++GLC+ G + EA+    RM + GL P    Y  
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 121 LIDGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++DG+CKK     A NL  +M +   +IP+   Y+A+ID   K     +A NL   M E 
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  DL  Y S++ G    G   +A  L  EM+ R I PD +   +L+    + G   EA
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 240 IELQNEMMGRGLLSGS 255
            EL +EM+ RG++  +
Sbjct: 345 EELYDEMLPRGIIPNT 360



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 1/248 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + T++ GLC E +  ++  LL  M E+GL    +   T++D   K G+   AL+
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I   VV +  +ID LCK G   +A + F  M + G+ P++  Y ++I G 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  L  EM +R + PD   Y ALI+ ++K   F EA  L + M   G+  + 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+S++ G  +   L  A  +F+ M  +G  P+ I   +L+  +     +D+ +EL +E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 246 MMGRGLLS 253
           M   GL++
Sbjct: 421 MTETGLVA 428



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 123/292 (42%), Gaps = 46/292 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  DL  Y ++I G C   ++ D++ LL EM E  ++ + V    L++A+ K G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I    +T+  +IDG CK   +  A   F  M   G  PN+  +  
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV- 179
           LIDG C    I+    L  EM +  ++ DTT Y  LI G+        AL+L   M    
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 180 ---------------------------------------------GVDLDLNAYTSLVWG 194
                                                        GV+ D+  Y  L+ G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L   G   EA  L+ EM  RGI+PD I   S++    ++  +DEA ++ + M
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           YGTI+ G+C +     +  LL +M+E + +  N VI + ++D+  K G  S+A +L  EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +  I   + T+  +I G C SG   +A      M +  + P+V  Y ALI+   K+   
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  L+DEM  R +IP+T  Y+++IDG+ K      A ++   M   G   +L  + +L
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G      + +   L HEM   G++ D     +L+   Y  G+++ A++L  EM+  GL
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 11/266 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +   Y ++I G C +++ + ++ +   M   G + N +   TL+D Y  A  
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL EM ++ +     T+  LI G    G +  A+D    M   GL P++     
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 121 LIDGLCKKNCIERARNLFDEM-----------PKRDMIPDTTAYTALIDGYLKHESFKEA 169
           L+DGLC    ++ A  +F  M           P   + PD   Y  LI G +    F EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M   G+  D   Y+S++ GL +   L EA  +F  M  +   P+ +   +L+  
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGS 255
           + + G +D+ +EL  EM  RG+++ +
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANA 616



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 1/228 (0%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
            ED+  L S+M  +    + V    LM    +   P   +SL  +M   +I   + +F +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI   C    +  A+  FG++   GLHP+V  +  L+ GLC ++ +  A NLF +M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   +T L++G  +     EA+ L +RM E G+      Y ++V G+ + G    A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 206 VLFHEMIG-RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L  +M     I+P+ ++  +++    + G   +A  L  EM  +G+ 
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 137/262 (52%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +L  + T+I G C   + +D   LL EM E GL A+T    TL+  ++  G+
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDF 109
            + AL LL EM+ S +   +VT   L+DGLC +G +++A++ F  M           P  
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y+++IDG  K     EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             + + M       ++  +T+L+ G  + G + +   LF EM  RGI+ + I  I+L+  
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ A+++  EM+  G+
Sbjct: 626 FRKVGNINGALDIFQEMISSGV 647



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            +I  ++ +Y  II  LC + +  D++ L +EM+E G+  +     +++  +  +G  S+
Sbjct: 249 SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSD 308

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EML+ +I   VVT+  LI+   K G   EA + +  M   G+ PN   Y+++ID
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK+N ++ A ++F  M  +   P+   +  LIDGY   +   + + L + MTE G+  
Sbjct: 369 GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA 428

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           D   Y +L+ G    G L  A  L  EMI  G+ PD + C +LL    + G + +A+E+
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 128/256 (50%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  +  +I   C  SK   +     ++ + GL  + V  TTL+        
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL+L  +M ++     VVTF  L++GLC+ G + EA+    RM + GL P    Y  
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 121 LIDGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++DG+CKK     A NL  +M +   +IP+   Y+A+ID   K     +A NL   M E 
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  DL  Y S++ G    G   +A  L  EM+ R I PD +   +L+    + G   EA
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 240 IELQNEMMGRGLLSGS 255
            EL +EM+ RG++  +
Sbjct: 345 EELYDEMLPRGIIPNT 360



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 1/248 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + T++ GLC E +  ++  LL  M E+GL    +   T++D   K G+   AL+
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I   VV +  +ID LCK G   +A + F  M + G+ P++  Y ++I G 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  L  EM +R + PD   Y ALI+ ++K   F EA  L + M   G+  + 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+S++ G  +   L  A  +F+ M  +G  P+ I   +L+  +     +D+ +EL +E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 246 MMGRGLLS 253
           M   GL++
Sbjct: 421 MTETGLVA 428



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 123/292 (42%), Gaps = 46/292 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  DL  Y ++I G C   ++ D++ LL EM E  ++ + V    L++A+ K G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I    +T+  +IDG CK   +  A   F  M   G  PN+  +  
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV- 179
           LIDG C    I+    L  EM +  ++ DTT Y  LI G+        AL+L   M    
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 180 ---------------------------------------------GVDLDLNAYTSLVWG 194
                                                        GV+ D+  Y  L+ G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L   G   EA  L+ EM  RGI+PD I   S++    ++  +DEA ++ + M
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           YGTI+ G+C +     +  LL +M+E + +  N VI + ++D+  K G  S+A +L  EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +  I   + T+  +I G C SG   +A      M +  + P+V  Y ALI+   K+   
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  L+DEM  R +IP+T  Y+++IDG+ K      A ++   M   G   +L  + +L
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G      + +   L HEM   G++ D     +L+   Y  G+++ A++L  EM+  GL
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 11/266 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +   Y ++I G C +++ + ++ +   M   G + N +   TL+D Y  A  
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL EM ++ +     T+  LI G    G +  A+D    M   GL P++     
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 121 LIDGLCKKNCIERARNLFDEM-----------PKRDMIPDTTAYTALIDGYLKHESFKEA 169
           L+DGLC    ++ A  +F  M           P   + PD   Y  LI G +    F EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M   G+  D   Y+S++ GL +   L EA  +F  M  +   P+ +   +L+  
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGS 255
           + + G +D+ +EL  EM  RG+++ +
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANA 616



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 1/228 (0%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
            ED+  L S+M  +    + V    LM    +   P   +SL  +M   +I   + +F +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI   C    +  A+  FG++   GLHP+V  +T L+ GLC ++ +  A NLF +M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   +T L++G  +     EA+ L +RM E G+      Y ++V G+ + G    A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 206 VLFHEMIG-RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L  +M     I+P+ ++  +++    + G   +A  L  EM  +G+ 
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 137/262 (52%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +L  + T+I G C   + +D   LL EM E GL A+T    TL+  ++  G+
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDF 109
            + AL LL EM+ S +   +VT   L+DGLC +G +++A++ F  M           P  
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y+++IDG  K     EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             + + M       ++  +T+L+ G  + G + +   LF EM  RGI+ + I  I+L+  
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ A+++  EM+  G+
Sbjct: 626 FRKVGNINGALDIFQEMISSGV 647



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            +I  ++ +Y  II  LC + +  D++ L +EM+E G+  +     +++  +  +G  S+
Sbjct: 249 SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSD 308

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EML+ +I   VVT+  LI+   K G   EA + +  M   G+ PN   Y+++ID
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK+N ++ A ++F  M  +   P+   +  LIDGY   +   + + L + MTE G+  
Sbjct: 369 GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA 428

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           D   Y +L+ G    G L  A  L  EMI  G+ PD + C +LL    + G + +A+E+
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 126/256 (49%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  +  +I   C  SK   +     ++ + GL  + V  TTL+        
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL    +M ++     VVTF  L++GLC+ G + EA+    RM + GL P    Y  
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 121 LIDGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++DG+CKK     A NL  +M +   +IP+   Y+A+ID   K     +A NL   M E 
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  DL  Y S++ G    G   +A  L  EM+ R I PD +   +L+    + G   EA
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 240 IELQNEMMGRGLLSGS 255
            EL +EM+ RG++  +
Sbjct: 345 EELYDEMLPRGIIPNT 360



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 1/248 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + T++ GLC E +  ++  LL  M E+GL    +   T++D   K G+   AL+
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I   VV +  +ID LCK G   +A + F  M + G+ P++  Y ++I G 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  L  EM +R + PD   Y ALI+ ++K   F EA  L + M   G+  + 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+S++ G  +   L  A  +F+ M  +G  P+ I   +L+  +     +D+ +EL +E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 246 MMGRGLLS 253
           M   GL++
Sbjct: 421 MTETGLVA 428



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 123/292 (42%), Gaps = 46/292 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  DL  Y ++I G C   ++ D++ LL EM E  ++ + V    L++A+ K G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I    +T+  +IDG CK   +  A   F  M   G  PN+  +  
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV- 179
           LIDG C    I+    L  EM +  ++ DTT Y  LI G+        AL+L   M    
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 180 ---------------------------------------------GVDLDLNAYTSLVWG 194
                                                        GV+ D+  Y  L+ G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L   G   EA  L+ EM  RGI+PD I   S++    ++  +DEA ++ + M
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           YGTI+ G+C +     +  LL +M+E + +  N VI + ++D+  K G  S+A +L  EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +  I   + T+  +I G C SG   +A      M +  + P+V  Y ALI+   K+   
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  L+DEM  R +IP+T  Y+++IDG+ K      A ++   M   G   +L  + +L
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G      + +   L HEM   G++ D     +L+   Y  G+++ A++L  EM+  GL
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 11/266 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +   Y ++I G C +++ + ++ +   M   G + N +   TL+D Y  A  
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL EM ++ +     T+  LI G    G +  A+D    M   GL P++     
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 121 LIDGLCKKNCIERARNLFDEM-----------PKRDMIPDTTAYTALIDGYLKHESFKEA 169
           L+DGLC    ++ A  +F  M           P   + PD   Y  LI G +    F EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M   G+  D   Y+S++ GL +   L EA  +F  M  +   P+ +   +L+  
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGS 255
           + + G +D+ +EL  EM  RG+++ +
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANA 616



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 1/227 (0%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           ED+  L S+M  +    + V    LM    +   P   +SL  +M   +I   + +F +L
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I   C    +  A+  FG++   GLHP+V  +T L+ GLC ++ +  A + F +M +   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P+   +T L++G  +     EA+ L +RM E G+      Y ++V G+ + G    A  
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 207 LFHEMIG-RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           L  +M     I+P+ ++  +++    + G   +A  L  EM  +G+ 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 73/156 (46%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + +AID F  M      P+V  +  L+  + +    +   +L+ +M ++ +  D  ++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI  +        AL+   ++T++G+  D+  +T+L+ GL     + EA   FH+M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             P+ +   +L+      G + EA+ L + MM  GL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 83/240 (34%), Positives = 123/240 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC   + +++  L  +M+EN    + V  T LMD   K     EA  +L
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M D      V+T+  LIDGLCK+G VR+A + F RM   G+ PNV  Y +LI G C  
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A  L +EM     +PD   Y  LIDG  K     EA  L   M     + D+  Y
Sbjct: 420 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 479

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + L+ G  +   +  AR LF +M+ + +LPD +   +L++ +   G +D+A  L  EM+ 
Sbjct: 480 SCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVA 539



 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 129/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  ++  Y T+I G C ++K + +  L  +M ENG   N V   TL+    + G 
Sbjct: 187 MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGL 246

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LLDEM +  ++    ++  L+ GLCK+G +  A+  F    +    P+V  Y+ 
Sbjct: 247 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 306

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK   ++ A  LF++M +    PD   +TAL+DG  K +  +EA  +   M +  
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y+SL+ GL + G +++A+ +F  MI RGI P+ +   SL+        +D A+
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426

Query: 241 ELQNEMMGRGLL 252
            L  EM   G L
Sbjct: 427 LLMEEMTATGCL 438



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N   ++  Y ++I GLC   +  D++ +   M   G+  N V   +L+  +     
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L++EM  +     ++T+  LIDGLCK+G   EA   FG M     +P+V  Y+ 
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   I+ AR LFD+M K+ ++PD   ++ L++GY       +A  L   M    
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD 541

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YTSLV G  + G + EAR +   M  RG  P+ +   +L+      G    A 
Sbjct: 542 CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAY 601

Query: 241 ELQNEMMGRGL 251
            L  EM+G G+
Sbjct: 602 RLLEEMVGNGV 612



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K    +   Y  +I G C   K   + LLL EMKE+GL  N V  +T++  + +  +
Sbjct: 152 MKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTK 211

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  +M+++     +VT+  L+ GLC++GL+ EA +    M + GL P+   Y  
Sbjct: 212 VDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDT 271

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLCK   I+ A  +F++    D  PD  AY+ LI G  K     EA  L  +M E  
Sbjct: 272 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENS 331

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+  +T+L+ GL +   LQEA+ +   M  R   P+ I   SL+    + G + +A 
Sbjct: 332 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQ 391

Query: 241 ELQNEMMGRGL 251
           E+   M+ RG+
Sbjct: 392 EVFKRMIVRGI 402



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 122/241 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  Y T++ GLC     +++  LL EM+E GL  +     TLM    K G+   AL + 
Sbjct: 230 NLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF 289

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++  +      VV +  LI GLCK+G + EA   F +M +    P+V  +TAL+DGLCK 
Sbjct: 290 EDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKG 349

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A+ + + M  R+  P+   Y++LIDG  K    ++A  +  RM   G++ ++  Y
Sbjct: 350 DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTY 409

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SL+ G      +  A +L  EM   G LPD I   +L+    + G   EA  L  +M  
Sbjct: 410 NSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA 469

Query: 249 R 249
           +
Sbjct: 470 K 470



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 3/237 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  ++  Y  +I GLC     + +  LL EM+E+G   +  I   ++ A  KA   ++AL
Sbjct: 55  ITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKAL 114

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
                M     E  V+T+ ++IDGLCK+  + EA  YF +M   G  PN   Y  LI+G 
Sbjct: 115 DYFRSM---ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGF 171

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK + + RA  L  EM +  + P+   Y+ +I G+ +      A  L  +M E G   +L
Sbjct: 172 CKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNL 231

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             Y +L+ GL R G + EA  L  EM  RG+ PD+    +L+    + G +D A+++
Sbjct: 232 VTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 288



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 124/253 (49%), Gaps = 2/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M+ + ++ D   Y T++ GLC   K  D  L + E   NG    + V  +TL+    KAG
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKI-DMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA  L ++M ++  E  VVTF  L+DGLCK   ++EA      M D    PNV  Y+
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LIDGLCK   +  A+ +F  M  R + P+   Y +LI G+        AL L   MT  
Sbjct: 376 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 435

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  Y +L+ GL + G   EA  LF +M  +   PD I    L+    +   +D A
Sbjct: 436 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 495

Query: 240 IELQNEMMGRGLL 252
             L ++M+ + +L
Sbjct: 496 RTLFDDMLKQAVL 508



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 113/236 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I+ ++  Y ++I G C+ +  + + LL+ EM   G   + +   TL+D   K G   E
Sbjct: 400 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 459

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L  +M        V+T+  LI G CK   +  A   F  M    + P+V  ++ L++
Sbjct: 460 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 519

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C    ++ A  L +EM   D  PD   YT+L+DG+ K     EA  +  RM + G   
Sbjct: 520 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 579

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           ++  YT+L+    R G    A  L  EM+G G+ P+ I   SL+      G+++EA
Sbjct: 580 NVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 635



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K    D+  Y  +I G C   + + ++ L  +M +  +  + V  +TL++ Y  AG 
Sbjct: 467 MKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGL 526

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL+EM+ S     V T+  L+DG CK G + EA     RM   G  PNV  YTA
Sbjct: 527 VDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTA 586

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LID  C+      A  L +EM    + P+   Y +LI G+      +EA  +  R+  + 
Sbjct: 587 LIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDE 646

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
               D+ AY  ++ GL R G +  A  L   +   G  P   + ++L++   +   + +A
Sbjct: 647 NCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKA 706

Query: 240 IELQNEM 246
           +E+  EM
Sbjct: 707 MEVLEEM 713



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 3/250 (1%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K +    ++  Y  +   L    + +++  +L      G+T N      ++    K+G+ 
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +A  LL+EM +S        +  +I  LCK+    +A+DYF  M       NV  +T +
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIM 132

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           IDGLCK N +  A   F +M K+  +P+   Y  LI+G+ K      A  L   M E G+
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++  Y++++ G  R   +  A  LF +M+  G +P+ +   +LL      G MDEA E
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252

Query: 242 LQNEMMGRGL 251
           L +EM  RGL
Sbjct: 253 LLDEMRERGL 262



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 112/237 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC  ++  ++    ++MK+ G   N      L++ + K  +   A  LL EM 
Sbjct: 129 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 188

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S +   VVT+  +I G C+   V  A   F +M + G  PN+  Y  L+ GLC+   ++
Sbjct: 189 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 248

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L DEM +R + PD  +Y  L+ G  K      AL +    +      D+ AY++L+
Sbjct: 249 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 308

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            GL + G L EA  LF +M      PD +   +L+    +   + EA ++   M  R
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 365



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 96/203 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC   +  ++  L  +MK      + +  + L+  + K      A +L 
Sbjct: 440 DIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLF 499

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D+ML   +   VVTF  L++G C +GLV +A      M      P+V  YT+L+DG CK 
Sbjct: 500 DDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKV 559

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  AR +   M KR   P+   YTALID + +      A  L   M   GV  ++  Y
Sbjct: 560 GRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITY 619

Query: 189 TSLVWGLSRCGHLQEARVLFHEM 211
            SL+ G    G L+EAR +   +
Sbjct: 620 RSLIGGFCGTGDLEEARKILERL 642



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 3/238 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  +Y  +I  LC   K  ++   L   +      N +  T ++D   KA    EA +  
Sbjct: 93  DAAIYNFVIHALC---KARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRLPEATTYF 149

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M          T+ VLI+G CK   V  A      M + GL PNV  Y+ +I G C++
Sbjct: 150 AKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQ 209

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  LF +M +   +P+   Y  L+ G  ++    EA  L + M E G+  D  +Y
Sbjct: 210 TKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSY 269

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +L+ GL + G +  A  +F +       PD +   +L+    + G +DEA +L  +M
Sbjct: 270 DTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM 327



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 2/215 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   +   D+  Y +++ G C   +  +++ +L  M + G   N V  T L+DA+ +AG+
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 596

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYT 119
           P+ A  LL+EM+ + ++  V+T+  LI G C +G + EA     R+  D     ++  Y 
Sbjct: 597 PTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYR 656

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT-E 178
            ++DGLC+   +  A  L + + +    P    Y ALI G  + +   +A+ +   MT  
Sbjct: 657 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 716

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
                +  AY +++  L+R G  +EA  L  E++G
Sbjct: 717 RKSRPNAEAYEAVIQELAREGRHEEANALADELLG 751


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 137/262 (52%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +L  + T+I G C   + +D   LL EM E GL A+T    TL+  ++  G+
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDF 109
            + AL LL EM+ S +   +VT   L+DGLC +G +++A++ F  M           P  
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y+++IDG  K     EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             + + M       ++  +T+L+ G  + G + +   LF EM  RGI+ + I  I+L+  
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ A+++  EM+  G+
Sbjct: 626 FRKVGNINGALDIFQEMISSGV 647



 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            +I  ++ +Y  II  LC + +  D++ L +EM+E G+  +     +++  +  +G  S+
Sbjct: 249 SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSD 308

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EML+ +I   VVT+  LI+   K G   EA + +  M   G+ PN   Y+++ID
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK+N ++ A ++F  M  +   P+   +  LIDGY   +   + + L + MTE G+  
Sbjct: 369 GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA 428

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           D   Y +L+ G    G L  A  L  EMI  G+ PD + C +LL    + G + +A+E+
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 126/256 (49%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  +  +I   C  SK   +     ++ + GL  + V   TL+        
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL+L  +M ++     VVTF  L++GLC+ G + EA+    RM + GL P    Y  
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 121 LIDGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++DG+CK      A +L  +M +   +IP+   Y+A+ID   K     +A NL   M E 
Sbjct: 225 IVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  DL  Y S++ G    G   +A  L  EM+ R I PD +   +L+    + G   EA
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 240 IELQNEMMGRGLLSGS 255
            EL +EM+ RG++  +
Sbjct: 345 EELYDEMLPRGIIPNT 360



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 1/248 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + T++ GLC E +  ++  LL  M E+GL    +   T++D   K G+   AL 
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALD 240

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I   VV +  +ID LCK G   +A + F  M + G+ P++  Y ++I G 
Sbjct: 241 LLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  L  EM +R + PD   Y ALI+ ++K   F EA  L + M   G+  + 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+S++ G  +   L  A  +F+ M  +G  P+ I   +L+  +     +D+ +EL +E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 246 MMGRGLLS 253
           M   GL++
Sbjct: 421 MTETGLVA 428



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 123/292 (42%), Gaps = 46/292 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  DL  Y ++I G C   ++ D++ LL EM E  ++ + V    L++A+ K G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I    +T+  +IDG CK   +  A   F  M   G  PN+  +  
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV- 179
           LIDG C    I+    L  EM +  ++ DTT Y  LI G+        AL+L   M    
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 180 ---------------------------------------------GVDLDLNAYTSLVWG 194
                                                        GV+ D+  Y  L+ G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L   G   EA  L+ EM  RGI+PD I   S++    ++  +DEA ++ + M
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 120/240 (50%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           YGTI+ G+C       +  LL +M+E + +  N VI + ++D+  K G  S+A +L  EM
Sbjct: 222 YGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +  I   + T+  +I G C SG   +A      M +  + P+V  Y ALI+   K+   
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  L+DEM  R +IP+T  Y+++IDG+ K      A ++   M   G   +L  + +L
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G      + +   L HEM   G++ D     +L+   Y  G+++ A++L  EM+  GL
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 11/266 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +   Y ++I G C +++ + ++ +   M   G + N +   TL+D Y  A  
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL EM ++ +     T+  LI G    G +  A+D    M   GL P++     
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 121 LIDGLCKKNCIERARNLFDEM-----------PKRDMIPDTTAYTALIDGYLKHESFKEA 169
           L+DGLC    ++ A  +F  M           P   + PD   Y  LI G +    F EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M   G+  D   Y+S++ GL +   L EA  +F  M  +   P+ +   +L+  
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGS 255
           + + G +D+ +EL  EM  RG+++ +
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANA 616



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 1/228 (0%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
            ED+  L S+M  +    + V    LM    +   P   +SL  +M   +I   + +F +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI   C    +  A+  FG++   GLHP+V  +  L+ GLC ++ +  A NLF +M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   +T L++G  +     EA+ L +RM E G+      Y ++V G+ + G    A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 206 VLFHEMIG-RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L  +M     I+P+ ++  +++    + G   +A  L  EM  +G+ 
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 137/262 (52%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +L  + T+I G C   + +D   LL EM E GL A+T    TL+  ++  G+
Sbjct: 386 MATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGD 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDF 109
            + AL LL EM+ S +   +VT   L+DGLC +G +++A++ F  M           P  
Sbjct: 446 LNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFN 505

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y+++IDG  K     EA
Sbjct: 506 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             + + M       ++  +T+L+ G  + G + +   LF EM  RGI+ + I  I+L+  
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICG 625

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ A+++  EM+  G+
Sbjct: 626 FRKVGNINGALDIFQEMISSGV 647



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            +I  ++ +Y  II  LC + +  D++ L +EM+E G+  +     +++  +  +G  S+
Sbjct: 249 SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSD 308

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EML+ +I   VVT+  LI+   K G   EA + +  M   G+ PN   Y+++ID
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMID 368

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK+N ++ A ++F  M  +   P+   +  LIDGY   +   + + L + MTE G+  
Sbjct: 369 GFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVA 428

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           D   Y +L+ G    G L  A  L  EMI  G+ PD + C +LL    + G + +A+E+
Sbjct: 429 DTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEM 487



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 127/256 (49%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  +  +I   C  SK   +     ++ + GL  + V   TL+        
Sbjct: 105 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDR 164

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL+L  +M ++     VVTF  L++GLC+ G + EA+    RM + GL P    Y  
Sbjct: 165 VSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 121 LIDGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++DG+CKK     A NL  +M +   +IP+   Y+A+ID   K     +A NL   M E 
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  DL  Y S++ G    G   +A  L  EM+ R I PD +   +L+    + G   EA
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 240 IELQNEMMGRGLLSGS 255
            EL +EM+ RG++  +
Sbjct: 345 EELYDEMLPRGIIPNT 360



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 1/248 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + T++ GLC E +  ++  LL  M E+GL    +   T++D   K G+   AL+
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I   VV +  +ID LCK G   +A + F  M + G+ P++  Y ++I G 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  L  EM +R + PD   Y ALI+ ++K   F EA  L + M   G+  + 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNT 360

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+S++ G  +   L  A  +F+ M  +G  P+ I   +L+  +     +D+ +EL +E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 246 MMGRGLLS 253
           M   GL++
Sbjct: 421 MTETGLVA 428



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 123/292 (42%), Gaps = 46/292 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  DL  Y ++I G C   ++ D++ LL EM E  ++ + V    L++A+ K G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I    +T+  +IDG CK   +  A   F  M   G  PN+  +  
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV- 179
           LIDG C    I+    L  EM +  ++ DTT Y  LI G+        AL+L   M    
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 180 ---------------------------------------------GVDLDLNAYTSLVWG 194
                                                        GV+ D+  Y  L+ G
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L   G   EA  L+ EM  RGI+PD I   S++    ++  +DEA ++ + M
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           YGTI+ G+C +     +  LL +M+E + +  N VI + ++D+  K G  S+A +L  EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +  I   + T+  +I G C SG   +A      M +  + P+V  Y ALI+   K+   
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  L+DEM  R +IP+T  Y+++IDG+ K      A ++   M   G   +L  + +L
Sbjct: 342 FEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTL 401

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G      + +   L HEM   G++ D     +L+   Y  G+++ A++L  EM+  GL
Sbjct: 402 IDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGL 461



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 11/266 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +   Y ++I G C +++ + ++ +   M   G + N +   TL+D Y  A  
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL EM ++ +     T+  LI G    G +  A+D    M   GL P++     
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 121 LIDGLCKKNCIERARNLFDEM-----------PKRDMIPDTTAYTALIDGYLKHESFKEA 169
           L+DGLC    ++ A  +F  M           P   + PD   Y  LI G +    F EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M   G+  D   Y+S++ GL +   L EA  +F  M  +   P+ +   +L+  
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGS 255
           + + G +D+ +EL  EM  RG+++ +
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANA 616



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 1/228 (0%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
            ED+  L S+M  +    + V    LM    +   P   +SL  +M   +I   + +F +
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI   C    +  A+  FG++   GLHP+V  +  L+ GLC ++ +  A NLF +M +  
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   +T L++G  +     EA+ L +RM E G+      Y ++V G+ + G    A 
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 206 VLFHEMIG-RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L  +M     I+P+ ++  +++    + G   +A  L  EM  +G+ 
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 122/238 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I GLC+ + F+D++ L ++M   G   + V    ++DA  K G   EA  L+ +M+
Sbjct: 48  YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI 107

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      VVT+  ++DGLCKSG V EA+  F  M   G  PN   +  +I GLC+++ I+
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  +F EM  RD+ PD+ +Y  LIDG  K     EA  L  RM + G+      Y  ++
Sbjct: 168 QACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI 227

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G+     L EA  LF  M  +G  P       L+  H +RG MDEA  L   M   G
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDG 285



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 117/245 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  +     +  +I   C   K +++  LL  M ++G   + V  +TL+        
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL++M+  + + TVVT   LI GLCK+G ++EA +    M   G  P+V  Y  
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+    ERAR L  +M  R + P+   YTAL+ G  K     EA  +  +M   G
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  YT+L+ G    G +     LF EM+  GI PD ++  +L  +  + G    A+
Sbjct: 426 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 485

Query: 241 ELQNE 245
           E+  E
Sbjct: 486 EILRE 490



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + TII GLC +SK + +  +  EM+   +  ++     L+D   KAG+ +EA  L   ML
Sbjct: 153 HNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRML 212

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           DS I  + VT+ V+I G+C +  + EA++ F  M   G  P+   +  LID  CK+  ++
Sbjct: 213 DSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMD 272

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M     +PD   Y+ LI G        +A +L   M +      +    +L+
Sbjct: 273 EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 332

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G ++EAR +   M+  G  PD +   +L+  H   G  + A EL ++M+ RGL
Sbjct: 333 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 115/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ ++I  D   YG +I GL    K  ++  L   M ++G+T + V    ++     A  
Sbjct: 176 MEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L   M       +  TF +LID  CK G + EA     RM D G  P+V  Y+ 
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    ++ AR+L ++M KR   P       LI G  K    KEA  + + M   G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +LV G  R G  + AR L  +M+ RG+ P+ +   +L+    +   + EA 
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415

Query: 241 ELQNEMMGRG 250
            +  +M   G
Sbjct: 416 GVFAQMKSSG 425



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 117/242 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T++ GLC   + E++ LL +EM+  G T N     T++    +  +  +A  + 
Sbjct: 114 DVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM    I     ++ +LIDGL K+G + EA   F RM D G+ P+   Y  +I G+C  
Sbjct: 174 HEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLA 233

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  LF  M  +   P    +  LID + K     EA  L  RMT+ G   D+  Y
Sbjct: 234 YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTY 293

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           ++L+ GL     + +AR L  +M+ R   P  +   +L+    + G + EA E+ + M+ 
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 353

Query: 249 RG 250
            G
Sbjct: 354 SG 355



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 113/276 (40%), Gaps = 37/276 (13%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC  ++ +D++ LL +M +       V   TL+    KAG   EA  +L
Sbjct: 289 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 348

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+ S     VVT+  L+ G C++G    A +    M   GL PNV  YTAL+ GLCK 
Sbjct: 349 DAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 408

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +  A  +F +M      P+   YTALI G+         L L   M   G+  D   Y
Sbjct: 409 NRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 468

Query: 189 TSLV---------------------------WG----------LSRCGHLQEARVLFHEM 211
            +L                            WG          L   G ++ A     +M
Sbjct: 469 GTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDM 528

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +  G LP    C SL+    + G   EA  +  E+M
Sbjct: 529 VRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 107/216 (49%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E  ++ ++     L+D   KAG+ ++A  L  ++L S +  + V +  LI GLC +  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
             +A + F  M   G  P+   Y  +ID  CK+  +E A +L  +M +   +PD   Y  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           ++DG  K    +EAL L N M  +G   +  ++ +++ GL +   + +A  +FHEM  R 
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I PD      L+    + G ++EA +L   M+  G+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGI 216



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 6/145 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      +L  Y  +I G C   + +    L  EM   G++ + V+  TL     K+G 
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 61  PSEALSLLDEMLDS-RIEV---TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
            + AL +L E  +S R E     V  F V  DGL  +G +  A+ +   M   G  P   
Sbjct: 481 SARALEILREGRESLRSEAWGDEVYRFAV--DGLLDAGKMEMALGFVRDMVRGGQLPAPE 538

Query: 117 VYTALIDGLCKKNCIERARNLFDEM 141
              +L+ GLCK      AR + +E+
Sbjct: 539 RCASLVAGLCKSGQGGEARAVLEEI 563


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 130/246 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   IK ++  Y TII G C   + E ++++   MK  G+  ++    + +    K G+
Sbjct: 217 MEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGK 276

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L++M +  +  T VT+  LIDG C  G +  A DY  +M   GL P V+ Y  
Sbjct: 277 LEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNM 336

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L     ++ A  +  EM ++ ++PD+  Y  LI+GY +  + K+A  L + M   G
Sbjct: 337 LIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKG 396

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTSL++ LS+ G +++A  LF +++ +GI PD I+  +L+  H   GNMD A 
Sbjct: 397 IQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAF 456

Query: 241 ELQNEM 246
            +  EM
Sbjct: 457 AMLKEM 462



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 137/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +K D   YG+ I G+C E K E++  +L +MKE GL    V   TL+D Y   G 
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311

Query: 61  PSEALSLLDEMLDSRIEVTV-----------------------------------VTFCV 85
              A    D+M+   +  TV                                   VT+ +
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+G C+ G V++A      M   G+ P    YT+LI  L K+  +++A +LF+++ ++ 
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   + ALIDG+  + +   A  +   M ++ V  D   + +L+ G  R G ++ AR
Sbjct: 432 IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAR 491

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L  EM  RGI PD I   +L+  + +RG+M +A  +++EM+  G 
Sbjct: 492 ELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGF 537



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 120/244 (49%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           LY  +I   C   + +D+      MK  G+  +   C  ++  + K+    +A  L  EM
Sbjct: 123 LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM 182

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
              RI+ +VVTF ++I+ LCK G +++A ++ G M   G+ PNV  Y  +I G C +  +
Sbjct: 183 FRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRV 242

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E AR +FD M  R + PD+  Y + I G  K    +EA  +  +M E+G+      Y +L
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G    G+L+ A     +M+  G++P       L+   +    MDEA  +  EM  +GL
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL 362

Query: 252 LSGS 255
           +  S
Sbjct: 363 VPDS 366



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 35/251 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  L ++ K +++  ++ EM E GL  ++V    L++ Y + G   +A +L DEM+
Sbjct: 334 YNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMI 393

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID--------- 123
              I+ T VT+  LI  L K G +++A D F ++   G+ P++ ++ ALID         
Sbjct: 394 SKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMD 453

Query: 124 --------------------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                     G C++  +E AR L +EM  R + PD  +Y  LI
Sbjct: 454 RAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLI 513

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            GY K    K+A  +++ M  +G +  L  Y +L+ GL +      A  L  EMI +GI 
Sbjct: 514 SGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGIT 573

Query: 218 PDEILCISLLK 228
           P++   +SL++
Sbjct: 574 PNDNTYLSLIE 584



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 86/195 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+     Y ++I+ L    + + +  L  ++   G+  + ++   L+D +   G 
Sbjct: 392 MISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGN 451

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++L EM   ++    VTF  L+ G C+ G V  A +    M   G+ P+   Y  
Sbjct: 452 MDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNT 511

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K+  ++ A  + DEM      P    Y ALI G  K+E    A  L   M   G
Sbjct: 512 LISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKG 571

Query: 181 VDLDLNAYTSLVWGL 195
           +  + N Y SL+ G+
Sbjct: 572 ITPNDNTYLSLIEGI 586



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 77/173 (44%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           T V + +LI   C+     +A + F  M   G+ P+V     ++    K N  E+A  L+
Sbjct: 120 TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
            EM +  +      +  +I+   K    K+A      M  +G+  ++  Y +++ G    
Sbjct: 180 AEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSR 239

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G ++ AR++F  M  RG+ PD     S +    + G ++EA  +  +M   GL
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGL 292


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 133/252 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D   Y T+I G C E  F  + ++ +EM  +GLT + +  T+L+ +  KAG 
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+  LD+M    +     T+  L+DG  + G + EA      M D G  P+V  Y A
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C    +E A  + ++M ++ + PD  +Y+ ++ G+ +     EAL +K  M E G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y+SL+ G       +EA  L+ EM+  G+ PDE    +L+  +   G++++A+
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540

Query: 241 ELQNEMMGRGLL 252
           +L NEM+ +G+L
Sbjct: 541 QLHNEMVEKGVL 552



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 127/255 (49%), Gaps = 15/255 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C+  K ED+  +L +MKE GL+ + V  +T++  + ++ +  EAL +  EM+
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I+   +T+  LI G C+    +EA D +  M   GL P+   YTALI+  C +  +E
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL---------------KNRMT 177
           +A  L +EM ++ ++PD   Y+ LI+G  K    +EA  L                + + 
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E   +++  +  SL+ G    G + EA  +F  M+G+   PD      ++  H   G++ 
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657

Query: 238 EAIELQNEMMGRGLL 252
           +A  L  EM+  G L
Sbjct: 658 KAYTLYKEMVKSGFL 672



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 113/209 (54%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I  +C       +   L +M+  GL  N    TTL+D + + G  +EA  +L EM 
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+    +VVT+  LI+G C +G + +AI     M + GL P+V  Y+ ++ G C+   ++
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +  EM ++ + PDT  Y++LI G+ +    KEA +L   M  VG+  D   YT+L+
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEI 221
                 G L++A  L +EM+ +G+LPD +
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVV 556



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    ++  Y T+I G C   K +D   LL  M   GL  N +    +++   + G 
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   +L EM      +  VT+  LI G CK G   +A+     M   GL P+V  YT+
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  +CK   + RA    D+M  R + P+   YT L+DG+ +     EA  +   M + G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  Y +L+ G    G +++A  +  +M  +G+ PD +   ++L       ++DEA+
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 241 ELQNEMMGRGL 251
            ++ EM+ +G+
Sbjct: 471 RVKREMVEKGI 481



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 130/253 (51%), Gaps = 15/253 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G   +    ++  +L EM +NG + + V    L++ +   G+  +A+++L++M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   VV++  ++ G C+S  V EA+     M + G+ P+   Y++LI G C++   +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L++EM +  + PD   YTALI+ Y      ++AL L N M E GV  D+  Y+ L+
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEIL---------------CISLLKKHYERGNMD 237
            GL++    +EA+ L  ++     +P ++                 +SL+K    +G M 
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622

Query: 238 EAIELQNEMMGRG 250
           EA ++   M+G+ 
Sbjct: 623 EADQVFESMLGKN 635



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 1/216 (0%)

Query: 37  KENGLTANTVICTTLMDAYFKAGEP-SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           + +G     +    ++DA  ++    S A ++  EML+S++   V T+ +LI G C +G 
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           +  A+  F +M   G  PNV  Y  LIDG CK   I+    L   M  + + P+  +Y  
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +I+G  +    KE   +   M   G  LD   Y +L+ G  + G+  +A V+  EM+  G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + P  I   SL+    + GNM+ A+E  ++M  RGL
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 115/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y  +I G C     + +  L  +M+  G   N V   TL+D Y K  +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   LL  M    +E  ++++ V+I+GLC+ G ++E       M   G   +   Y  
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+    +A  +  EM +  + P    YT+LI    K  +   A+   ++M   G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+LV G S+ G++ EA  +  EM   G  P  +   +L+  H   G M++AI
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435

Query: 241 ELQNEMMGRGL 251
            +  +M  +GL
Sbjct: 436 AVLEDMKEKGL 446



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 104/220 (47%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  EM E+ ++ N      L+  +  AG    AL+L D+M        VVT+  LIDG C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K   + +       M   GL PN+  Y  +I+GLC++  ++    +  EM +R    D  
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  LI GY K  +F +AL +   M   G+   +  YTSL+  + + G++  A     +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             RG+ P+E    +L+    ++G M+EA  +  EM   G 
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 15/267 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK D   Y ++I G C + + +++  L  EM   GL  +    T L++AY   G+
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA------IDYFGRMP-DFGLH- 112
             +AL L +EM++  +   VVT+ VLI+GL K    REA      + Y   +P D   H 
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595

Query: 113 -----PNVAVYT--ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
                 N+   +  +LI G C K  +  A  +F+ M  ++  PD TAY  +I G+ +   
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            ++A  L   M + G  L      +LV  L + G + E   +   ++    L +      
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLL 252
           L++ ++  GNMD  +++  EM   G L
Sbjct: 716 LVEINHREGNMDVVLDVLAEMAKDGFL 742


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 132/257 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K++  D+  Y  I+ GLC   K E++K +  EM+E G+  N     TL+D+ FK G 
Sbjct: 113 MTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGN 172

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L   M+   I   VV +  L+DGL K+G+   A D F  + +  L PN   Y+A
Sbjct: 173 VAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSA 232

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   + +   L  EM ++ + P+   Y++++DGY K     EA+++  +M +  
Sbjct: 233 LIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ G  +      A  LF EM  RG+  +  +  S +      G M+EA 
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352

Query: 241 ELQNEMMGRGLLSGSKN 257
           EL  +MM RGLL    N
Sbjct: 353 ELFKDMMSRGLLPDRVN 369



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 124/241 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+  +  +  +I G C   +   +  LL  MK  G   + V   TLM+ + K G+   A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ E+    +E  V+T+  LID  CKS  + +A+  +  M    L P+V  YT +++GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +E A+++F EM +  ++P+  +Y  LID   K  +  EA  L+ RM   G+  D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+ GL + G    A  +F  ++   ++P+ +   +L+  H + G++++   L  E
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 246 M 246
           M
Sbjct: 253 M 253



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 134/286 (46%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    D+  Y T++ G C       +K L+ E+    L  N +  TTL+DAY K+  
Sbjct: 43  MKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQC 102

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------ 114
             +AL + DEM    +   VVT+  +++GLCKSG V EA   F  M + G+ PN      
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 115 -----------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                        V VYTAL+DGL K      A ++F  + +  
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+   Y+ALIDG+ K     +   L   M E  +  ++  Y+S+V G ++ G L EA 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +  +M+ R ILP+  +  +L+  +++      A++L  EM  RGL
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 121/244 (49%), Gaps = 3/244 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C        +LLL EM+E  +  N ++ ++++D Y K G  +EA+ ++ +M+
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   V  +  LIDG  K+     A+D F  M   GL  N  V  + ++ L +   +E
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M  R ++PD   YT+++DG+ K     +A N+   MTE     D+ AY  L+
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409

Query: 193 WGLSRCGHLQEARVLFHE-MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G  +     FH  M   G+ PD     +++  + + GN+  A++L NEM   GL
Sbjct: 410 NGLFKLGKYESES--FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467

Query: 252 LSGS 255
              S
Sbjct: 468 KPNS 471



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 124/256 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D   + T+I   C E    ++  LL+EMK  GL  N++ C  L+     AGE
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL++ML      T  T   ++D   KS      +    ++   G+  +++ Y  
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C+   I RA  +F +M  + ++ D   Y ALI GY      K+A  + ++M   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y  L+ GLS    ++EA  L ++M  RG++P+      L+  H + GNM E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 241 ELQNEMMGRGLLSGSK 256
           +L  EM+ +G +  ++
Sbjct: 667 KLYCEMITKGFVPKTR 682



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 97/176 (55%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I  +V  F VLIDG C++G +  A++    M   G  P++  Y  L++G CK   +  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L  E+   ++ P+   YT LID Y K +  ++AL + + MT   +  D+  YT ++ GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + G ++EA+ +F EM   G++P+     +L+   ++ GN+ EA  LQ  M+ RG+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K+I  ++ +Y +I+ G   +    ++  ++ +M +  +  N  +  TL+D YFKA +
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L  EM    +E         ++ L +SG + EA + F  M   GL P+   YT+
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG  K      A N+  EM ++    D  AY  LI+G  K   + E+ +    M ++G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLG 431

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   + +++    + G+L  A  L +EM   G+ P+ I C  L+++    G +++ +
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491

Query: 241 ELQNEMMGRGL 251
           +L N+M+  G 
Sbjct: 492 DLLNDMLVMGF 502



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 14/238 (5%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  +K DL  Y T+I   C       + L+  +M   G+ A+ +    L+  Y  +    
Sbjct: 534 GMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLK 593

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A ++  +ML   +   V T+ +L+ GL  + L++EA     +M + GL PN   Y  L+
Sbjct: 594 KAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILV 653

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G  K   ++    L+ EM  +  +P T  Y  LI  + K +   +A  L   M   G+ 
Sbjct: 654 SGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIP 713

Query: 183 LDLNAYTSLVWG---LSRCGHLQ---------EARVLFHEMIGRGILPDE--ILCISL 226
            + + Y  L+ G   LS+   L          EA+ LF EM  +G +P E  + CIS 
Sbjct: 714 PNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 7/256 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + ++ +  +  + +  L    + E++  L  +M   GL  + V  T++MD +FKAG+
Sbjct: 323 MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGK 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A ++  EM +      VV + VLI+GL K G   E+  +   M   GL P+ A +  
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNT 441

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+  CK+  +  A  L +EM    + P++     L+         ++ ++L N M  +G
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFH---EMIGRGILPDEILCISLLKKHYERGNMD 237
                  + +++   S+    + A V+ H   +++G G+  D     +L+      G + 
Sbjct: 502 FHPTPTTHKAVLDASSKS---RRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558

Query: 238 EAIELQNEMMGRGLLS 253
            A  +  +MMG+G+L+
Sbjct: 559 RATLVFKDMMGKGILA 574


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 132/257 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K++  D+  Y  I+ GLC   K E++K +  EM+E G+  N     TL+D+ FK G 
Sbjct: 113 MTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGN 172

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L   M+   I   VV +  L+DGL K+G+   A D F  + +  L PN   Y+A
Sbjct: 173 VAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSA 232

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   + +   L  EM ++ + P+   Y++++DGY K     EA+++  +M +  
Sbjct: 233 LIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ G  +      A  LF EM  RG+  +  +  S +      G M+EA 
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352

Query: 241 ELQNEMMGRGLLSGSKN 257
           EL  +MM RGLL    N
Sbjct: 353 ELFKDMMSRGLLPDRVN 369



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 124/241 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+  +  +  +I G C   +   +  LL  MK  G   + V   TLM+ + K G+   A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ E+    +E  V+T+  LID  CKS  + +A+  +  M    L P+V  YT +++GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +E A+++F EM +  ++P+  +Y  LID   K  +  EA  L+ RM   G+  D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+ GL + G    A  +F  ++   ++P+ +   +L+  H + G++++   L  E
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 246 M 246
           M
Sbjct: 253 M 253



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 134/286 (46%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    D+  Y T++ G C       +K L+ E+    L  N +  TTL+DAY K+  
Sbjct: 43  MKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQC 102

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------ 114
             +AL + DEM    +   VVT+  +++GLCKSG V EA   F  M + G+ PN      
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 115 -----------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                        V VYTAL+DGL K      A ++F  + +  
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+   Y+ALIDG+ K     +   L   M E  +  ++  Y+S+V G ++ G L EA 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +  +M+ R ILP+  +  +L+  +++      A++L  EM  RGL
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 121/244 (49%), Gaps = 3/244 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C        +LLL EM+E  +  N ++ ++++D Y K G  +EA+ ++ +M+
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   V  +  LIDG  K+     A+D F  M   GL  N  V  + ++ L +   +E
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M  R ++PD   YT+++DG+ K     +A N+   MTE     D+ AY  L+
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409

Query: 193 WGLSRCGHLQEARVLFHE-MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G  +     FH  M   G+ PD     +++  + + GN+  A++L NEM   GL
Sbjct: 410 NGLFKLGKYESES--FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467

Query: 252 LSGS 255
              S
Sbjct: 468 KPNS 471



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 124/256 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D   + T+I   C E    ++  LL+EMK  GL  N++ C  L+     AGE
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL++ML      T  T   ++D   KS      +    ++   G+  +++ Y  
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNT 546

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C+   I RA  +F +M  + ++ D   Y ALI GY      K+A  + ++M   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y  L+ GLS    ++EA  L ++M  RG++P+      L+  H + GNM E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 241 ELQNEMMGRGLLSGSK 256
           +L  EM+ +G +  ++
Sbjct: 667 KLYCEMITKGFVPKTR 682



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 97/176 (55%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I  +V  F VLIDG C++G +  A++    M   G  P++  Y  L++G CK   +  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L  E+   ++ P+   YT LID Y K +  ++AL + + MT   +  D+  YT ++ GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + G ++EA+ +F EM   G++P+     +L+   ++ GN+ EA  LQ  M+ RG+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K+I  ++ +Y +I+ G   +    ++  ++ +M +  +  N  +  TL+D YFKA +
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L  EM    +E         ++ L +SG + EA + F  M   GL P+   YT+
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG  K      A N+  EM ++    D  AY  LI+G  K   + E+ +    M ++G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLG 431

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   + +++    + G+L  A  L +EM   G+ P+ I C  L+++    G +++ +
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491

Query: 241 ELQNEMMGRGL 251
           +L N+M+  G 
Sbjct: 492 DLLNDMLVMGF 502



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 14/238 (5%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  +K DL  Y T+I   C       + L+  +M   G+ A+ +    L+  Y  +    
Sbjct: 534 GMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLK 593

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A ++  +ML   +   V T+ +L+ GL  + L++EA     +M + GL PN   Y  L+
Sbjct: 594 KAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILV 653

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G  K   ++    L+ EM  +  +P T  Y  LI  + K +   +A  L   M   G+ 
Sbjct: 654 SGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIP 713

Query: 183 LDLNAYTSLVWG---LSRCGHLQ---------EARVLFHEMIGRGILPDE--ILCISL 226
            + + Y  L+ G   LS+   L          EA+ LF EM  +G +P E  + CIS 
Sbjct: 714 PNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 7/256 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + ++ +  +  + +  L    + E++  L  +M   GL  + V  T++MD +FKAG+
Sbjct: 323 MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGK 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A ++  EM +      VV + VLI+GL K G   E+  +   M   GL P+ A +  
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNT 441

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+  CK+  +  A  L +EM    + P++     L+         ++ ++L N M  +G
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFH---EMIGRGILPDEILCISLLKKHYERGNMD 237
                  + +++   S+    + A V+ H   +++G G+  D     +L+      G + 
Sbjct: 502 FHPTPTTHKAVLDASSKS---RRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558

Query: 238 EAIELQNEMMGRGLLS 253
            A  +  +MMG+G+L+
Sbjct: 559 RATLVFKDMMGKGILA 574


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 142/246 (57%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N K D+  Y  +I  LC +   + +  LL+EMK+  +  N     +L+D   K G+
Sbjct: 194 MEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQ 253

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +  +LL EM++  I   V TF +LIDGLCK G V +A +    M + G+ P++  Y+A
Sbjct: 254 WEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSA 313

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG C +  ++RAR +F+ +  + + P+  +Y+ LI+GY K ++  +A+ L   +++ G
Sbjct: 314 IMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKG 373

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y++++ GL   G + +A+ +F EM+  G  PD  L  +LL  +++ G ++EA+
Sbjct: 374 LKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAM 433

Query: 241 ELQNEM 246
            L +++
Sbjct: 434 LLFSKL 439



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 116/215 (53%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           NI  ++  +  +I GLC E K ED+  ++  M E G+  + +  + +MD Y   G+   A
Sbjct: 268 NINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRA 327

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             + + + D  I+  + ++ +LI+G CK   + +A+  FG +   GL P+   Y+ ++ G
Sbjct: 328 RRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHG 387

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L +   I  A+ +FDEM +    PD   ++ L+ GY K+   +EA+ L +++     D +
Sbjct: 388 LIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTN 447

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           ++ YT ++ GL +   ++EA  +F ++   G++PD
Sbjct: 448 ISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPD 482



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 130/248 (52%), Gaps = 3/248 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPSEA 64
           I  ++  + T++ GL  E+K  D+ +L  ++ +E     N V+  T+M+   K G   + 
Sbjct: 128 IPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKT 187

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           LSLL  M     +  V T+ ++ID LCK   +  AI+    M    + PN+  Y +LIDG
Sbjct: 188 LSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDG 247

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK    E+ + L  EM   ++ P+   ++ LIDG  K    ++A  +   M E GV+ D
Sbjct: 248 LCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPD 307

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY-ERGNMDEAIELQ 243
           +  Y++++ G    G +  AR +F+ +  +GI P+ I   S+L   Y ++ N+ +A++L 
Sbjct: 308 IITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN-IFSYSILINGYCKKKNLAKAMQLF 366

Query: 244 NEMMGRGL 251
            E+  +GL
Sbjct: 367 GEISQKGL 374



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 123/239 (51%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +YGT++ GL      E +  LL  M++     +    + ++DA  K      A++LL+EM
Sbjct: 170 MYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM 229

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               I   + T+  LIDGLCK G   +       M +  ++PNV  ++ LIDGLCK+  +
Sbjct: 230 KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKV 289

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  +   M ++ + PD   Y+A++DGY        A  + N + + G+  ++ +Y+ L
Sbjct: 290 EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSIL 349

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + G  +  +L +A  LF E+  +G+ PD +   ++L    E G + +A ++ +EM+  G
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG 408



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 101/215 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ K IK ++  Y  +I G C +     +  L  E+ + GL  +TV  +T++    + G 
Sbjct: 334 LRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGR 393

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + DEML       +     L+ G  K GLV EA+  F ++       N++ YT 
Sbjct: 394 IGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTV 453

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK + +  A  +F+++P   +IPD   Y  +I G+ +   F E   +  +M + G
Sbjct: 454 VINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNG 513

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
              +   Y  ++ G  R   + E      EM GRG
Sbjct: 514 CPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG 548



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 120/232 (51%), Gaps = 1/232 (0%)

Query: 21  CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI-EVT 79
           C+  + + +  +L    + G+  N V   TL+   F   + ++A+ L  +++  +I E  
Sbjct: 108 CLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPN 167

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
            V +  +++GL K G   + +     M      P+V  Y+ +ID LCK   ++ A NL +
Sbjct: 168 EVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLN 227

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM ++++ P+   Y +LIDG  K   +++   L + M  + ++ +++ ++ L+ GL + G
Sbjct: 228 EMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEG 287

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +++A  +   MI +G+ PD I   +++  +  RG +D A  + N +  +G+
Sbjct: 288 KVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGI 339


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 133/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN + ++  Y TII  LC + +  ++  L SEM   G++ +     +L+ A     E
Sbjct: 243 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 302

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL+EM++S+I   VV F  ++D LCK G++  A D    M   G+ P+V  YTA
Sbjct: 303 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 362

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A  +FD M  +  +P+  +Y  LI+GY + +   +A+ L  +M+  G
Sbjct: 363 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 422

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +L+ GL   G LQ A  LFHEM+  G +PD +    LL    +  ++ EA+
Sbjct: 423 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 482

Query: 241 ELQNEMMGRGL 251
            L   + G  L
Sbjct: 483 VLLKAIEGSNL 493



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 119/248 (47%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+  + D+  YGT++ GLC       +  LL  M +     N +   T++D+  K  + +
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA +L  EM+   I   + T+  LI  LC     +        M +  + PNV V++ ++
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 329

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK+  I  A ++ D M KR + PD   YTAL+DG+       EA+ + + M   G  
Sbjct: 330 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 389

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++ +Y  L+ G  +   + +A  L  +M  +G++ D +   +L+      G +  AI L
Sbjct: 390 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 449

Query: 243 QNEMMGRG 250
            +EM+  G
Sbjct: 450 FHEMVASG 457



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 108/219 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y ++I  LC   +++    LL+EM  + +  N V+ +T++DA  K G 
Sbjct: 278 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 337

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  ++D M+   +E  VVT+  L+DG C    + EA+  F  M   G  PNV  Y  
Sbjct: 338 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 397

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+   +++A  L ++M  + +I DT  Y  LI G       + A+ L + M   G
Sbjct: 398 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 457

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              DL  Y  L+  L +  HL EA VL   + G  +  D
Sbjct: 458 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 496



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 117/257 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+     +I   C   +   +  +L+++ + G   +     TL+      G+
Sbjct: 138 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 197

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L D+ +    +  VVT+  L++GLCK G    AI     M      PNV  Y  
Sbjct: 198 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 257

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   +  A NLF EM  + + PD   Y +LI        +K    L N M    
Sbjct: 258 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 317

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  ++++V  L + G +  A  +   MI RG+ PD +   +L+  H  R  MDEA+
Sbjct: 318 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 377

Query: 241 ELQNEMMGRGLLSGSKN 257
           ++ + M+ +G +   ++
Sbjct: 378 KVFDTMVHKGCVPNVRS 394



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 102/220 (46%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++M   G+  +      L++++        A S+L ++L    +    TF  LI GLC
Sbjct: 134 LSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLC 193

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + EA+  F +    G  P+V  Y  L++GLCK      A  L   M +++  P+  
Sbjct: 194 VEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVI 253

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           AY  +ID   K     EA NL + M   G+  D+  Y SL+  L      +    L +EM
Sbjct: 254 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM 313

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   I+P+ ++  +++    + G +  A ++ + M+ RG+
Sbjct: 314 VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV 353



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 89/209 (42%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +TV  T L+ +  K    S  LSL  +M    I   V T  +LI+  C    +  A    
Sbjct: 111 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 170

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            ++   G  P+   +  LI GLC +  I  A +LFD+       PD   Y  L++G  K 
Sbjct: 171 AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKV 230

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
            +   A+ L   M +     ++ AY +++  L +   + EA  LF EMI +GI PD    
Sbjct: 231 GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTY 290

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            SL+              L NEM+   ++
Sbjct: 291 NSLIHALCNLCEWKHVTTLLNEMVNSKIM 319



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 83/189 (43%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +ALS  + ML      + V F  L+  + K       +    +M  FG+ P+V     LI
Sbjct: 95  DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 154

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C    +  A ++  ++ K    PD T +  LI G        EAL+L ++    G  
Sbjct: 155 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 214

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y +L+ GL + G+   A  L   M+ +   P+ I   +++    +   + EA  L
Sbjct: 215 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 274

Query: 243 QNEMMGRGL 251
            +EM+ +G+
Sbjct: 275 FSEMITKGI 283



 Score = 40.0 bits (92), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 52/123 (42%)

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A + F+ M      P T  +T L+    K + +   L+L  +M   G+  D+   
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+        L  A  +  +++  G  PD     +L++     G + EA+ L ++ +G
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210

Query: 249 RGL 251
            G 
Sbjct: 211 EGF 213


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 132/257 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K++  D+  Y  I+ GLC   K E++K +  EM+E G+  N     TL+D+ FK G 
Sbjct: 113 MTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGN 172

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L   M+   I   VV +  L+DGL K+G+   A D F  + +  L PN   Y+A
Sbjct: 173 VAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSA 232

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   + +   L  EM ++ + P+   Y++++DGY K     EA+++  +M +  
Sbjct: 233 LIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ G  +      A  LF EM  RG+  +  +  S +      G M+EA 
Sbjct: 293 ILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEAD 352

Query: 241 ELQNEMMGRGLLSGSKN 257
           EL  +MM RGLL    N
Sbjct: 353 ELFKDMMSRGLLPDRVN 369



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 124/241 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+  +  +  +I G C   +   +  LL  MK  G   + V   TLM+ + K G+   A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ E+    +E  V+T+  LID  CKS  + +A+  +  M    L P+V  YT +++GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +E A+++F EM +  ++P+  +Y  LID   K  +  EA  L+ RM   G+  D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+ GL + G    A  +F  ++   ++P+ +   +L+  H + G++++   L  E
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 246 M 246
           M
Sbjct: 253 M 253



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 134/286 (46%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    D+  Y T++ G C       +K L+ E+    L  N +  TTL+DAY K+  
Sbjct: 43  MKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQC 102

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------ 114
             +AL + DEM    +   VVT+  +++GLCKSG V EA   F  M + G+ PN      
Sbjct: 103 LEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYAT 162

Query: 115 -----------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                        V VYTAL+DGL K      A ++F  + +  
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+   Y+ALIDG+ K     +   L   M E  +  ++  Y+S+V G ++ G L EA 
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +  +M+ R ILP+  +  +L+  +++      A++L  EM  RGL
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGL 328



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 121/244 (49%), Gaps = 3/244 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C        +LLL EM+E  +  N ++ ++++D Y K G  +EA+ ++ +M+
Sbjct: 230 YSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMV 289

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   V  +  LIDG  K+     A+D F  M   GL  N  V  + ++ L +   +E
Sbjct: 290 QRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRME 349

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M  R ++PD   YT+++DG+ K     +A N+   MTE     D+ AY  L+
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409

Query: 193 WGLSRCGHLQEARVLFHE-MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G  +     FH  M   G+ PD     +++  + + GN+  A++L NEM   GL
Sbjct: 410 NGLFKLGKYESES--FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467

Query: 252 LSGS 255
              S
Sbjct: 468 KPNS 471



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 124/256 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D   + T+I   C E    ++  LL+EMK  GL  N++ C  L+     AGE
Sbjct: 427 MRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGE 486

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL++ML      T  T   ++D   KS      +    ++   G+  +++ Y  
Sbjct: 487 IEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNT 546

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C+   I RA  +F +M  + ++ D   Y ALI GY      K+A  + ++M   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y  L+ GLS    ++EA  L ++M  RG++P+      L+  H + GNM E +
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 241 ELQNEMMGRGLLSGSK 256
           +L  EM+ +G +  ++
Sbjct: 667 KLYCEMITKGFVPKTR 682



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 97/176 (55%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I  +V  F VLIDG C++G +  A++    M   G  P++  Y  L++G CK   +  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L  E+   ++ P+   YT LID Y K +  ++AL + + MT   +  D+  YT ++ GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + G ++EA+ +F EM   G++P+     +L+   ++ GN+ EA  LQ  M+ RG+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI 188



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 124/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K+I  ++ +Y +I+ G   +    ++  ++ +M +  +  N  +  TL+D YFKA +
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQ 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L  EM    +E         ++ L +SG + EA + F  M   GL P+   YT+
Sbjct: 313 RGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTS 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG  K      A N+  EM ++    D  AY  LI+G  K   + E+ +    M ++G
Sbjct: 373 MMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLG 431

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   + +++    + G+L  A  L +EM   G+ P+ I C  L+++    G +++ +
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491

Query: 241 ELQNEMMGRGL 251
           +L N+M+  G 
Sbjct: 492 DLLNDMLVMGF 502



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 14/238 (5%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  +K DL  Y T+I   C       + L+  +M   G+ A+ +    L+  Y  +    
Sbjct: 534 GMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLK 593

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A ++  +ML   +   V T+ +L+ GL  + L++EA     +M + GL PN   Y  L+
Sbjct: 594 KAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILV 653

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G  K   ++    L+ EM  +  +P T  Y  LI  + K +   +A  L   M   G+ 
Sbjct: 654 SGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIP 713

Query: 183 LDLNAYTSLVWG---LSRCGHLQ---------EARVLFHEMIGRGILPDE--ILCISL 226
            + + Y  L+ G   LS+   L          EA+ LF EM  +G +P E  + CIS 
Sbjct: 714 PNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISF 771



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 7/256 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + ++ +  +  + +  L    + E++  L  +M   GL  + V  T++MD +FKAG+
Sbjct: 323 MKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGK 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A ++  EM +      VV + VLI+GL K G   E+  +   M   GL P+ A +  
Sbjct: 383 ESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNT 441

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+  CK+  +  A  L +EM    + P++     L+         ++ ++L N M  +G
Sbjct: 442 MINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMG 501

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFH---EMIGRGILPDEILCISLLKKHYERGNMD 237
                  + +++   S+    + A V+ H   +++G G+  D     +L+      G + 
Sbjct: 502 FHPTPTTHKAVLDASSKS---RRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558

Query: 238 EAIELQNEMMGRGLLS 253
            A  +  +MMG+G+L+
Sbjct: 559 RATLVFKDMMGKGILA 574


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  +  +I G C   + +D   LL EM   GL ANT+  TTL+  + + G 
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGN 438

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDF 109
            + AL LL EM+ S +   VVT   L+DGLC +G +++A++ F  M           P  
Sbjct: 439 LNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN 498

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
            + P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y ++IDG  K     EA
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEA 558

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             + + M   G   D+  +T+L+ G  + G + +   +F EM  RGI+ + I   +L+  
Sbjct: 559 TQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHG 618

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ A+++  EM+  G+
Sbjct: 619 FCQVGNINGALDIFQEMISSGV 640



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 127/237 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK ++ +Y  II GL  + +  D++ L SEM+E G++ N      +++ +  +G  SEA 
Sbjct: 244 IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQ 303

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL EM + ++   VVTF VLI+ L K G   EA + +  M   G+ PN   Y ++IDG 
Sbjct: 304 RLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGF 363

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K+N ++ A  +F  M  +   PD   ++ LIDGY   +   + + L + M+  G+  + 
Sbjct: 364 SKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANT 423

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             YT+L+ G  + G+L  A  L  EMI  G+ P+ + C +LL      G + +A+E+
Sbjct: 424 ITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEM 480



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 131/250 (52%), Gaps = 1/250 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  + T++ GLC E +  ++  LL  M E+GL  N +   T++D   K G+   AL+
Sbjct: 174 KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 233

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + SRI+  VV +  +IDGL K G   +A + F  M + G+ PN+  Y  +I+G 
Sbjct: 234 LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGF 293

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A+ L  EM +R M PD   ++ LI+  +K   F EA  L N M   G+  + 
Sbjct: 294 CSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNT 353

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y S++ G S+   L  A  +F+ M  +G  PD I    L+  +     +D+ ++L +E
Sbjct: 354 ITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHE 413

Query: 246 MMGRGLLSGS 255
           M  RGL++ +
Sbjct: 414 MSRRGLVANT 423



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 11/266 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +   Y ++I G   +++ + ++ +   M   G + + +  + L+D Y  A  
Sbjct: 344 MLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKR 403

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL EM    +    +T+  LI G C+ G +  A+D    M   G+ PNV     
Sbjct: 404 VDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNT 463

Query: 121 LIDGLCKKNCIERARNLFDEM-----------PKRDMIPDTTAYTALIDGYLKHESFKEA 169
           L+DGLC    ++ A  +F  M           P  D+ PD   Y  LI G +    F EA
Sbjct: 464 LLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEA 523

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M   G+  D   Y S++ GL +   L EA  +F  M  +G  PD +   +L+  
Sbjct: 524 EELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLING 583

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGS 255
           + + G + + +E+  EM  RG+++ +
Sbjct: 584 YCKVGRVGDGLEVFCEMGRRGIVANA 609



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 109/256 (42%), Gaps = 32/256 (12%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLI---- 87
           L  +M+   +  N    T L+  +    +   ALS   ++       ++VTF  L+    
Sbjct: 98  LHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLC 157

Query: 88  ---------------------------DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                                      +GLC+ G V EA+    RM + GL PN   Y  
Sbjct: 158 VEDRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 217

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++DG+CK      A NL  +M +   I P+   Y+A+IDG  K     +A NL + M E 
Sbjct: 218 IVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEK 277

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  +L  Y  ++ G    G   EA+ L  EM  R + PD +    L+    + G   EA
Sbjct: 278 GISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEA 337

Query: 240 IELQNEMMGRGLLSGS 255
            EL NEM+ RG++  +
Sbjct: 338 EELYNEMLPRGIIPNT 353



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 7/203 (3%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+    +   P   +SL  +M   RI   + +F +LI   C    +  A+  FG++   G
Sbjct: 82  LLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLG 141

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
            HP++  ++ L+ GLC ++ +  A + F ++ K    P+  A+T L++G  +     EA+
Sbjct: 142 FHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAV 197

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM--IGRGILPDEILCISLLK 228
            L +RM E G+  +   Y ++V G+ + G    A  L  +M  + R I P+ ++  +++ 
Sbjct: 198 ALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSR-IKPNVVIYSAIID 256

Query: 229 KHYERGNMDEAIELQNEMMGRGL 251
             ++ G   +A  L +EM  +G+
Sbjct: 257 GLWKDGRQTDAQNLFSEMQEKGI 279


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 134/250 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I AD+  Y T+I+G CI  K +++  LL+EM    +  N      L+DA  K G+
Sbjct: 225 MAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGK 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S+L  ML + ++  V+T+  L+DG      V++A   F  M   G+ P+V  YT 
Sbjct: 285 VKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A NLF EM +++M+P    Y++LIDG  K        +L + M + G
Sbjct: 345 LINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y+SL+ GL + GHL  A  LF++M  + I P+      LL    + G + +A 
Sbjct: 405 QPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQ 464

Query: 241 ELQNEMMGRG 250
           E+  +++ +G
Sbjct: 465 EVFQDLLTKG 474



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 130/247 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T++ G  +  + + ++ + + M   G+T +    T L++ + K     EAL
Sbjct: 300 VKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEAL 359

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM    +   +VT+  LIDGLCKSG +    D    M D G   +V  Y++LIDGL
Sbjct: 360 NLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGL 419

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   ++RA  LF++M  +++ P+   +T L+DG  K    K+A  +   +   G  L++
Sbjct: 420 CKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNV 479

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  ++ G  + G L+EA  +  +M   G +P+     +++   +++   D+A +L  +
Sbjct: 480 YTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQ 539

Query: 246 MMGRGLL 252
           M+ RGLL
Sbjct: 540 MIARGLL 546



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 118/238 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G+C       +   L ++       + V+  T++DA  K    SEA  L  EM 
Sbjct: 167 YATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMA 226

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G C  G ++EAI     M    ++PNV  Y  L+D LCK+  ++
Sbjct: 227 VKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVK 286

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+++   M K  + PD   Y+ L+DGY      K+A ++ N M+ +GV  D++ YT L+
Sbjct: 287 EAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + EA  LF EM  + ++P  +   SL+    + G +    +L +EM  RG
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 117/248 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ DL     +I   C   +      +L+++ + G   +TV   TL+      G+  +
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL   D++L    ++  V++  LI+G+CK G  R AI +  ++      P+V +Y  +ID
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIID 207

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            +CK   +  A  LF EM  + +  D   Y  LI G+      KEA+ L N M    ++ 
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y  LV  L + G ++EA+ +   M+   + PD I   +L+  ++    + +A  + 
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 244 NEMMGRGL 251
           N M   G+
Sbjct: 328 NAMSLMGV 335



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 91/181 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+   +  Y ++I GLC   +      L+ EM++ G  A+ +  ++L+D   K G 
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGH 424

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A++L ++M D  I   + TF +L+DGLCK G +++A + F  +   G H NV  Y  
Sbjct: 425 LDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK+  +E A  +  +M     IP+   +  +I    K +   +A  L  +M   G
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544

Query: 181 V 181
           +
Sbjct: 545 L 545



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 74/147 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +   AD+  Y ++I GLC     + +  L ++MK+  +  N    T L+D   K G 
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +  ++L     + V T+ V+I+G CK GL+ EA+    +M D G  PN   +  
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFET 519

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI 147
           +I  L KK+  ++A  L  +M  R ++
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIARGLL 546



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 90/197 (45%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++D++ K    S A+SL   +    I+  ++T  +LI+  C  G +        ++   G
Sbjct: 65  ILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG 124

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+      LI GLC K  +++A +  D++  +    +  +Y  LI+G  K    + A+
Sbjct: 125 YPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAI 184

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
               ++       D+  Y +++  + +   + EA  LF EM  +GI  D +   +L+   
Sbjct: 185 KFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGF 244

Query: 231 YERGNMDEAIELQNEMM 247
              G + EAI L NEM+
Sbjct: 245 CIVGKLKEAIGLLNEMV 261



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 5/203 (2%)

Query: 54  AYFKAGEPS-----EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           ++F +  PS     +A+S  + ML  R    ++ F  ++D   K      A+    R+  
Sbjct: 28  SHFHSQPPSIQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLEL 87

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            G+ P++     LI+  C    I    ++  ++ KR   PDT     LI G       K+
Sbjct: 88  KGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKK 147

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           AL+  +++   G  L+  +Y +L+ G+ + G  + A     ++ GR   PD ++  +++ 
Sbjct: 148 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIID 207

Query: 229 KHYERGNMDEAIELQNEMMGRGL 251
              +   + EA  L +EM  +G+
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGI 230


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  141 bits (356), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 129/246 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +NIKA +  Y  +I  LC +  F+D+  L +EM+  G+ A+ V  ++L+      G+
Sbjct: 265 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 324

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +L EM+   I   VVTF  LID   K G + EA + +  M   G+ P+   Y +
Sbjct: 325 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 384

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+NC+  A  +FD M  +   PD   Y+ LI+ Y K +   + + L   ++  G
Sbjct: 385 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 444

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +LV G  + G L  A+ LF EM+ RG+ P  +    LL    + G +++A+
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504

Query: 241 ELQNEM 246
           E+  +M
Sbjct: 505 EIFEKM 510



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 117/212 (55%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   +T+  +TL++ +   G  SEA++L+D M++ +    +VT   LI+GLC  G V EA
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    RM ++G  P+   Y  +++ LCK      A +LF +M +R++      Y+ +ID 
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 283

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K  SF +AL+L N M   G+  D+  Y+SL+ GL   G   +   +  EMIGR I+PD
Sbjct: 284 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   +L+    + G + EA EL NEM+ RG+
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRGI 375



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 127/249 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + DL    T+I GLC++ +  ++ +L+  M E G   + V    +++   K+G  + AL 
Sbjct: 201 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 260

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  +M +  I+ +VV + ++ID LCK G   +A+  F  M   G+  +V  Y++LI GLC
Sbjct: 261 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 320

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    +  EM  R++IPD   ++ALID ++K     EA  L N M   G+  D  
Sbjct: 321 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 380

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y SL+ G  +   L EA  +F  M+ +G  PD +    L+  + +   +D+ + L  E+
Sbjct: 381 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 440

Query: 247 MGRGLLSGS 255
             +GL+  +
Sbjct: 441 SSKGLIPNT 449



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 126/244 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T++ G C+E +  ++  L+  M E     + V  +TL++     G  SEAL 
Sbjct: 166 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 225

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L+D M++   +   VT+  +++ LCKSG    A+D F +M +  +  +V  Y+ +ID LC
Sbjct: 226 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 285

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K    + A +LF+EM  + +  D   Y++LI G      + +   +   M    +  D+ 
Sbjct: 286 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 345

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +++L+    + G L EA+ L++EMI RGI PD I   SL+    +   + EA ++ + M
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 405

Query: 247 MGRG 250
           + +G
Sbjct: 406 VSKG 409



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 123/281 (43%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+NI  D+  +  +I     E K  ++K L +EM   G+  +T+   +L+D + K   
Sbjct: 335 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 394

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + D M+    E  +VT+ +LI+  CK+  V + +  F  +   GL PN   Y  
Sbjct: 395 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 454

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL-----KNR 175
           L+ G C+   +  A+ LF EM  R + P    Y  L+DG   +    +AL +     K+R
Sbjct: 455 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 514

Query: 176 MT------------------------------EVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           MT                              + GV  D+  Y  ++ GL + G L EA 
Sbjct: 515 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 574

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +LF +M   G  PD+     L++ H     +  ++EL  EM
Sbjct: 575 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 615



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 81/172 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G C   K   +K L  EM   G+  + V    L+D     GE ++AL + ++M 
Sbjct: 452 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            SR+ + +  + ++I G+C +  V +A   F  + D G+ P+V  Y  +I GLCKK  + 
Sbjct: 512 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 571

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            A  LF +M +    PD   Y  LI  +L       ++ L   M   G   D
Sbjct: 572 EADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 623



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 79/176 (44%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           IE  + T  ++I+  C+   +  A    GR    G  P+   ++ L++G C +  +  A 
Sbjct: 130 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 189

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L D M +    PD    + LI+G        EAL L +RM E G   D   Y  ++  L
Sbjct: 190 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 249

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + G+   A  LF +M  R I    +    ++    + G+ D+A+ L NEM  +G+
Sbjct: 250 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 305



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 45/98 (45%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K D+  Y  +I GLC +    ++ +L  +MKE+G T +      L+ A+        
Sbjct: 548 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 607

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           ++ L++EM          T  ++ID L    L +  +D
Sbjct: 608 SVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLD 645



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 35/158 (22%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +   + +Y  II G+C  SK +D+  L   + + G+  + V              
Sbjct: 510 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV-------------- 555

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                                T+ V+I GLCK G + EA   F +M + G  P+   Y  
Sbjct: 556 ---------------------TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 594

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           LI      + +  +  L +EM       D++    +ID
Sbjct: 595 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 632


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 129/246 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +NIKA +  Y  +I  LC +  F+D+  L +EM+  G+ A+ V  ++L+      G+
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +L EM+   I   VVTF  LID   K G + EA + +  M   G+ P+   Y +
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+NC+  A  +FD M  +   PD   Y+ LI+ Y K +   + + L   ++  G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +LV G  + G L  A+ LF EM+ RG+ P  +    LL    + G +++A+
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475

Query: 241 ELQNEM 246
           E+  +M
Sbjct: 476 EIFEKM 481



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 117/212 (55%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   +T+  +TL++ +   G  SEA++L+D M++ +    +VT   LI+GLC  G V EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    RM ++G  P+   Y  +++ LCK      A +LF +M +R++      Y+ +ID 
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K  SF +AL+L N M   G+  D+  Y+SL+ GL   G   +   +  EMIGR I+PD
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   +L+    + G + EA EL NEM+ RG+
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 127/249 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + DL    T+I GLC++ +  ++ +L+  M E G   + V    +++   K+G  + AL 
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  +M +  I+ +VV + ++ID LCK G   +A+  F  M   G+  +V  Y++LI GLC
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    +  EM  R++IPD   ++ALID ++K     EA  L N M   G+  D  
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y SL+ G  +   L EA  +F  M+ +G  PD +    L+  + +   +D+ + L  E+
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411

Query: 247 MGRGLLSGS 255
             +GL+  +
Sbjct: 412 SSKGLIPNT 420



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 126/244 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T++ G C+E +  ++  L+  M E     + V  +TL++     G  SEAL 
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L+D M++   +   VT+  +++ LCKSG    A+D F +M +  +  +V  Y+ +ID LC
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K    + A +LF+EM  + +  D   Y++LI G      + +   +   M    +  D+ 
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +++L+    + G L EA+ L++EMI RGI PD I   SL+    +   + EA ++ + M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376

Query: 247 MGRG 250
           + +G
Sbjct: 377 VSKG 380



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 123/281 (43%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+NI  D+  +  +I     E K  ++K L +EM   G+  +T+   +L+D + K   
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + D M+    E  +VT+ +LI+  CK+  V + +  F  +   GL PN   Y  
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL-----KNR 175
           L+ G C+   +  A+ LF EM  R + P    Y  L+DG   +    +AL +     K+R
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485

Query: 176 MT------------------------------EVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           MT                              + GV  D+  Y  ++ GL + G L EA 
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +LF +M   G  PD+     L++ H     +  ++EL  EM
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 81/172 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G C   K   +K L  EM   G+  + V    L+D     GE ++AL + ++M 
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            SR+ + +  + ++I G+C +  V +A   F  + D G+ P+V  Y  +I GLCKK  + 
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            A  LF +M +    PD   Y  LI  +L       ++ L   M   G   D
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 79/176 (44%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           IE  + T  ++I+  C+   +  A    GR    G  P+   ++ L++G C +  +  A 
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L D M +    PD    + LI+G        EAL L +RM E G   D   Y  ++  L
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + G+   A  LF +M  R I    +    ++    + G+ D+A+ L NEM  +G+
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 45/98 (45%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K D+  Y  +I GLC +    ++ +L  +MKE+G T +      L+ A+        
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           ++ L++EM          T  ++ID L    L +  +D
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLD 616



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 35/158 (22%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +   + +Y  II G+C  SK +D+  L   + + G+  + V              
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV-------------- 526

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                                T+ V+I GLCK G + EA   F +M + G  P+   Y  
Sbjct: 527 ---------------------TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           LI      + +  +  L +EM       D++    +ID
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 130/255 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K +  K D  +Y  ++ G C     E    L ++M  +    +    ++L+ AY +  +
Sbjct: 379 LKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQ 438

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL + + M+   I   VVT  +L+ G    GL+ EA  +  ++  FG+ P++  Y  
Sbjct: 439 LKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRV 498

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK N       +F +M KR  +PDT  Y+ +IDG++K    +EA  L  +M + G
Sbjct: 499 IIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEG 558

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YTSL+ GL     L E   LF  MIG G+ PD IL  SL+  + +R NM  A+
Sbjct: 559 TKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAAL 618

Query: 241 ELQNEMMGRGLLSGS 255
           E+  EM   GL + S
Sbjct: 619 EIFREMETEGLSADS 633



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 35/291 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N   D   Y ++I+  C   + +++  +   M  +G+  N V CT L+  +   G 
Sbjct: 414 MVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGL 473

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK---------------------------- 92
             EA   LD++    +  ++ T+ V+I GLCK                            
Sbjct: 474 IGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSI 533

Query: 93  --SGLVR-----EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
              G V+     EA   + +M D G  PN+  YT+LI+GLC  + +     LF  M    
Sbjct: 534 IIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEG 593

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   YT+LI  Y K  + K AL +   M   G+  D   YT L+ G S+   +  A+
Sbjct: 594 LAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQ 653

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           +   EM+ +G+ P  +    L+  +++ G+  +A+ + N M+  G+   +K
Sbjct: 654 LFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDAK 704



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 1/220 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +   L  Y  II GLC  +K  D   + ++M + G   +TV+ + ++D + KA +  EA 
Sbjct: 489 VVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAF 548

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  +M+D   +  + T+  LI+GLC    + E +  F  M   GL P+  +YT+LI   
Sbjct: 549 RLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACY 608

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK++ ++ A  +F EM    +  D+  YT LI G+ K  +   A      M   G+   +
Sbjct: 609 CKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTV 668

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL-CI 224
             YT L+ G  + G  ++A  +++ M+  GI PD  L CI
Sbjct: 669 VTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDAKLSCI 708



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 112/249 (44%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++ +   Y T ++GLC   + + +   L  + + G   N      ++  +   G+  +
Sbjct: 242 EGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHK 301

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ + D M        V ++ +L+DGLCK G V         M   G+ PN+  Y++L+ 
Sbjct: 302 AIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLH 361

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC+   +E A  LF  +  +    D   Y+ ++ G  +H   +   +L N M       
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVP 421

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D   Y+SL++   R   L+EA  +F  M+  GI P+ + C  L+      G + EA    
Sbjct: 422 DAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFL 481

Query: 244 NEMMGRGLL 252
           +++   G++
Sbjct: 482 DKVRQFGVV 490



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 35/273 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C + +   +  +   MK+ G   +    + L+D   K G+      +L EM 
Sbjct: 286 FNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMA 345

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + I   +V++  L+ GLC++G V  A + F R+ D G   +  VY+ ++ G C+   +E
Sbjct: 346 RNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLE 405

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
              +L+++M   + +PD   Y++LI  Y +H   KEAL +   M   G+  ++   T LV
Sbjct: 406 ICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILV 465

Query: 193 WGLSRCGHLQEA-------------------RVLFH----------------EMIGRGIL 217
            G S  G + EA                   RV+ H                +MI RG +
Sbjct: 466 HGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYV 525

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           PD +L   ++    +  ++ EA  L  +M+  G
Sbjct: 526 PDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEG 558



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 2/231 (0%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD--SRIEVTVVTFCVL 86
           ++ L  +MK +G + N    + LM  Y    +     +L          +     T+   
Sbjct: 195 ARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATY 254

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           + GLC +  V+ A ++   +   G   N   + A+I G C    + +A  +FD M K   
Sbjct: 255 LYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGF 314

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           +PD  +Y+ L+DG  K         +   M   G+  +L +Y+SL+ GL R G ++ A  
Sbjct: 315 VPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFE 374

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
           LF  +  +G   D I+   +L    +  +++   +L N+M+    +  + N
Sbjct: 375 LFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYN 425



 Score = 45.1 bits (105), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 43/86 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + + AD  +Y  +I G       + ++L + EM   GLT   V  T L+  YFK G+
Sbjct: 624 METEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGD 683

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVL 86
             +A+++ + ML + I       C+L
Sbjct: 684 EKKAMAMYNSMLQAGIAPDAKLSCIL 709


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 135/287 (47%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K +L  + +++ G+C   K ED++ +  EM   GL  + V   TL+  Y KAG 
Sbjct: 251 MREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGC 310

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EALS+  EM    I   VVTF  LI  +CK+G +  A+    +M + GL  N   +TA
Sbjct: 311 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTA 370

Query: 121 LIDGLCK--------------KNC---------------------IERARNLFDEMPKRD 145
           LIDG CK              K C                     ++ AR L  EM  + 
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   Y+ +I  Y K+     A  L  +M E GV  D   Y+SL+  L     L +A 
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           VLF  MI  G+ PDE    SL+  H + GN++ A+ L ++M+  G+L
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVL 537



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 129/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G     ++  Y T++       + + ++ L+  M+E GL  N V   ++++   KAG+
Sbjct: 216 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGK 275

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + DEM+   +    V++  L+ G CK+G   EA+  F  M   G+ P+V  +T+
Sbjct: 276 MEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 335

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  +CK   +ERA  L  +M +R +  +   +TALIDG+ K     +AL     M +  
Sbjct: 336 LIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCR 395

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +L+ G    G + EAR L HEM  +G+ PD +   +++  + +  +   A 
Sbjct: 396 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 455

Query: 241 ELQNEMMGRGLL 252
           EL  +M+ +G+L
Sbjct: 456 ELNQQMLEKGVL 467



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y  ++  LC     +++  +L +M+  G   N V   TL+ A+F+AGE
Sbjct: 181 MLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 240

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+  M +  ++  +VTF  +++G+CK+G + +A   F  M   GL P+   Y  
Sbjct: 241 VDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNT 300

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK  C   A ++F EM ++ ++PD   +T+LI    K  + + A+ L  +M E G
Sbjct: 301 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERG 360

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + ++   +T+L+ G  + G L +A +    M    I P  +   +L+  +   G MDEA 
Sbjct: 361 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEAR 420

Query: 241 ELQNEMMGRGL 251
           EL +EM  +GL
Sbjct: 421 ELLHEMEAKGL 431



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 118/228 (51%), Gaps = 1/228 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  L  ++    ++     M  +G+  N      L+ A    G   EALS+L +M 
Sbjct: 159 YNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMR 217

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +     VVT+  L+    ++G V  A    G M + GL PN+  + ++++G+CK   +E
Sbjct: 218 GAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKME 277

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR +FDEM +  + PD  +Y  L+ GY K     EAL++   MT+ G+  D+  +TSL+
Sbjct: 278 DARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLI 337

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             + + G+L+ A  L  +M  RG+  +E+   +L+    ++G +D+A+
Sbjct: 338 HVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 385



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  + ++I  +C     E +  L+ +M+E GL  N V  T L+D + K G 
Sbjct: 321 MTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL  +  M   RI+ +VV +  LI+G C  G + EA +    M   GL P+V  Y+ 
Sbjct: 381 LDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   CK      A  L  +M ++ ++PD   Y++LI      +   +A  L   M ++G
Sbjct: 441 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLG 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   YTSL+ G  + G+++ A  L  +M+  G+LPD +
Sbjct: 501 LQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVV 541



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 15/268 (5%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  D   Y ++I  LC E +  D+ +L   M + GL  +    T+L+D + K G    
Sbjct: 464 KGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVES 523

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL-- 121
           ALSL D+M+ + +   VVT+ VLI+GL KS    EA     ++      P    Y AL  
Sbjct: 524 ALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMH 583

Query: 122 -------------IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
                        + G C K  +  A  ++  M  R+   D + Y+ LI G+ +  +  +
Sbjct: 584 CCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMK 643

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           AL+   +M + G   +  +  SL+ GL   G + EA  +  +++    L D     +L+ 
Sbjct: 644 ALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALID 703

Query: 229 KHYERGNMDEAIELQNEMMGRGLLSGSK 256
            +   GN+D  +++ + M   GLL   +
Sbjct: 704 LNLNEGNVDAVLDVLHGMAKDGLLPSPR 731



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 90/190 (47%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           + A    D ML   +   V T+ +L+  LC  G  +EA+     M   G  PNV  Y  L
Sbjct: 172 TSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTL 231

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +    +   ++ A  L   M +  + P+   + ++++G  K    ++A  + + M   G+
Sbjct: 232 VAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGL 291

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D  +Y +LV G  + G   EA  +F EM  +GI+PD +   SL+    + GN++ A+ 
Sbjct: 292 APDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVT 351

Query: 242 LQNEMMGRGL 251
           L  +M  RGL
Sbjct: 352 LVRQMRERGL 361



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 1/174 (0%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           +V+ +  ++  L  + L   A  +F  M   G+ PNV  Y  L+  LC +   + A ++ 
Sbjct: 155 SVLAYNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSIL 213

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
            +M      P+   Y  L+  + +      A  L   M E G+  +L  + S+V G+ + 
Sbjct: 214 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKA 273

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G +++AR +F EM+  G+ PD +   +L+  + + G   EA+ +  EM  +G++
Sbjct: 274 GKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 327



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 1/105 (0%)

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           +P   AY A++   L   S   A    + M   GV  ++  Y  LV  L   GH +EA  
Sbjct: 153 VPSVLAYNAVLLA-LSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 211

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  +M G G  P+ +   +L+   +  G +D A  L   M   GL
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGL 256


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  Y  +I  LC+E++  +++  L EM    LT N V  T L+D   K G 
Sbjct: 37  MVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR 96

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++LL +M    +  T VT+  LI GLCK+    EA D    M   G  P++  YT 
Sbjct: 97  VDEAVALLSKMRKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 155

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK    + A  +F+++  R   PD   Y+ LIDG  K    KEA++L  RM + G
Sbjct: 156 LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215

Query: 181 VDL-DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             + +   Y SL+ G  R G + EA  L   M   G  PD +   +L+    +   +D+A
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275

Query: 240 IELQNEMMGRGL 251
            +L N+M  +GL
Sbjct: 276 YDLLNQMTRKGL 287



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 2/244 (0%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           AD   Y ++I GLC   + E + + L +M   G   +    T ++ A        EA   
Sbjct: 9   ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L+EM +  +   VVT+ VLIDGLCK G V EA+    +M    + P    Y +LI GLCK
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCK 127

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
                 A +L +EM     IPD   YT LI G+ K +   +AL +  ++   G   D+  
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRG-ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           Y+ L+ GL + G L+EA  LF  MI  G  +P+ +   SL+      G MDEA+ L   M
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 247 MGRG 250
              G
Sbjct: 248 AETG 251



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 124/245 (50%), Gaps = 9/245 (3%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T++ G C  ++ +D+  LL++M   GLT + V  T+LMD   +    S+A+ +L
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM       TV T+  ++DG C++  + EA  +   + +    PNV  +  +I GLCK 
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKV 372

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNA 187
           N    A  L +E  +R   PD   YT +IDG  + +   EA  +  +M  E G   +   
Sbjct: 373 NRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSIT 432

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE-AIELQNEM 246
           Y++LV GL   G L  AR      I +G +P+ I   +LL   + + N DE A EL ++M
Sbjct: 433 YSTLVTGLCNAGMLDRAR----GYIEKGCVPN-IGTYNLLIDAFRKANRDEDARELLDDM 487

Query: 247 MGRGL 251
           + RG 
Sbjct: 488 VQRGF 492



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 125/246 (50%), Gaps = 3/246 (1%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEP 61
            +  + D+  Y  +I GLC E + +++  L   M ++G    NTV   +L+  + + G+ 
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA++LL+ M ++     VVT+  L++G CK   + +A D   +M   GL P+V  +T+L
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +DGLC++N +  A ++  EM ++   P    Y  ++DGY +    +EA   K  + E+  
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA--RKFMLEEMDC 355

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++ ++  ++ GL +     EA  L  E   R   PD ++  +++        +DEA  
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACR 415

Query: 242 LQNEMM 247
           +  +M+
Sbjct: 416 VYRKML 421



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 5/217 (2%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           N  +A+ V  T+L+    K     +AL  L +M+       V T+  +I  LC    + E
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           A  +   M +  L PNV  YT LIDGLCK   ++ A  L  +M K+  +P    Y +LI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLIS 123

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           G  K E   EA +L   M   G   D+  YT+L+ G  +     +A  +F +++ RG  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           D +    L+    + G + EAI+L     GR + SGS
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDL----FGRMIKSGS 216



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 7/217 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D+  + +++ GLC E++  D+  +L EM+    +       T++D Y +A +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   + E +D      VV+F ++I GLCK     EA++          +P+V +YT 
Sbjct: 342 LEEARKFMLEEMDC--PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399

Query: 121 LIDGLCKKNCIERARNLFDEM-PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +IDGLC++  ++ A  ++ +M  +   +P++  Y+ L+ G         A        E 
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGY----IEK 455

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           G   ++  Y  L+    +    ++AR L  +M+ RG 
Sbjct: 456 GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 125/252 (49%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  Y  +I  LC+E++  +++  L EM    LT N V  T L+D   K G 
Sbjct: 37  MVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGR 96

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++LL +M    +  T VT+  LI GLCK+    EA D    M   G  P++  YT 
Sbjct: 97  VDEAVALLSKMRKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 155

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK    + A  +F+++  R   PD   Y+ LIDG  K    KEA++L  RM + G
Sbjct: 156 LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215

Query: 181 VDL-DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             + +   Y SL+ G  R G + EA  L   M   G  PD +   +L+    +   +D+A
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275

Query: 240 IELQNEMMGRGL 251
            +L N+M  +GL
Sbjct: 276 YDLLNQMTRKGL 287



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 2/244 (0%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           AD   Y ++I GLC   + E + + L +M   G   +    T ++ A        EA   
Sbjct: 9   ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKF 68

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L+EM +  +   VVT+ VLIDGLCK G V EA+    +M    + P    Y +LI GLCK
Sbjct: 69  LEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCK 127

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
                 A +L +EM     IPD   YT LI G+ K +   +AL +  ++   G   D+  
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRG-ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           Y+ L+ GL + G L+EA  LF  MI  G  +P+ +   SL+      G MDEA+ L   M
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 247 MGRG 250
              G
Sbjct: 248 AETG 251



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 124/245 (50%), Gaps = 9/245 (3%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T++ G C  ++ +D+  LL++M   GLT + V  T+LMD   +    S+A+ +L
Sbjct: 255 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL 314

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM       TV T+  ++DG C++  + EA  +   + +    PNV  +  +I GLCK 
Sbjct: 315 GEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKV 372

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNA 187
           N    A  L +E  +R   PD   YT +IDG  + +   EA  +  +M  E G   +   
Sbjct: 373 NRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSIT 432

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE-AIELQNEM 246
           Y++L+ GL   G L  AR      I +G +P+ I   +LL   + + N DE A EL ++M
Sbjct: 433 YSTLITGLCNAGMLDRAR----GYIEKGCVPN-IGTYNLLIDAFRKANRDEDARELLDDM 487

Query: 247 MGRGL 251
           + RG 
Sbjct: 488 VQRGF 492



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 125/246 (50%), Gaps = 3/246 (1%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEP 61
            +  + D+  Y  +I GLC E + +++  L   M ++G    NTV   +L+  + + G+ 
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA++LL+ M ++     VVT+  L++G CK   + +A D   +M   GL P+V  +T+L
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +DGLC++N +  A ++  EM ++   P    Y  ++DGY +    +EA   K  + E+  
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA--RKFMLEEMDC 355

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++ ++  ++ GL +     EA  L  E   R   PD ++  +++        +DEA  
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACR 415

Query: 242 LQNEMM 247
           +  +M+
Sbjct: 416 VYRKML 421



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 5/217 (2%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           N  +A+ V  T+L+    K     +AL  L +M+       V T+  +I  LC    + E
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           A  +   M +  L PNV  YT LIDGLCK   ++ A  L  +M K+  +P    Y +LI 
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLIS 123

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           G  K E   EA +L   M   G   D+  YT+L+ G  +     +A  +F +++ RG  P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           D +    L+    + G + EAI+L     GR + SGS
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDL----FGRMIKSGS 216



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 7/217 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D+  + +++ GLC E++  D+  +L EM+    +       T++D Y +A +
Sbjct: 282 MTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQ 341

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   + E +D      VV+F ++I GLCK     EA++          +P+V +YT 
Sbjct: 342 LEEARKFMLEEMDC--PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399

Query: 121 LIDGLCKKNCIERARNLFDEM-PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +IDGLC++  ++ A  ++ +M  +   +P++  Y+ LI G         A        E 
Sbjct: 400 VIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGY----IEK 455

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           G   ++  Y  L+    +    ++AR L  +M+ RG 
Sbjct: 456 GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 131/252 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D   + T+I GLC   KF  +     + + +G        TT+++   K GE + A 
Sbjct: 161 LQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAA 220

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  +M ++  +  VVT+ +LID LCK  LV EA+D F  M    + P++  Y +LI GL
Sbjct: 221 GLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGL 280

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C     + A  L +EM   +++P+   +  L+D   K     EA  +   MTE+GV+ D+
Sbjct: 281 CNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDV 340

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+SL++G S    + EAR LF  MI +G  PD      L+K + +   +DEA +L NE
Sbjct: 341 VTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNE 400

Query: 246 MMGRGLLSGSKN 257
           M+ +GL   + N
Sbjct: 401 MIHQGLTPDNVN 412



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 129/285 (45%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  D+  Y ++I GLC   +++++  LL+EM    +  N      L+DA  K G+
Sbjct: 261 MKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGK 320

Query: 61  PSEALSLLDEMLDSRIEVTVVTFC-----------------------------------V 85
            SEA  +   M +  +E  VVT+                                    +
Sbjct: 321 VSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNI 380

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G CK+  + EA   F  M   GL P+   Y  LI GLC+   +  A++LF  M    
Sbjct: 381 LIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            +PD   Y+ L+DG+ K     +A  L   M    +  D+  Y  L+  + + G+L++AR
Sbjct: 441 NLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDAR 500

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            LF E+  +G+LP+  +  +++    + G +DEA+E    M G G
Sbjct: 501 KLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 115/242 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    + ++  Y  +I  LC +    ++  + S MK   ++ +     +L+        
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRR 285

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +LL+EM    I   + TF VL+D +CK G V EA   F  M + G+ P+V  Y++
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSS 345

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   +  I  AR LFD M  +   PD  +Y  LI GY K +   EA  L N M   G
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +L+ GL + G L+EA+ LF  M   G LPD      LL    + G + +A 
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAF 465

Query: 241 EL 242
            L
Sbjct: 466 RL 467



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 118/248 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  Y ++++G  +  +  +++ L   M   G   +      L+  Y KA    EA 
Sbjct: 336 VEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAK 395

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +EM+   +    V +  LI GLC+ G +REA D F  M   G  P++  Y+ L+DG 
Sbjct: 396 QLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGF 455

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  + +A  LF  M    + PD   Y  LID   K  + K+A  L + +   G+  ++
Sbjct: 456 CKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNV 515

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+++  L + G L EA   F  M G G  PDE     +++   +  +   A +L  E
Sbjct: 516 QIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGE 575

Query: 246 MMGRGLLS 253
           M  RG ++
Sbjct: 576 MRDRGFVA 583



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 101/219 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D   Y  +I G C   + +++K L +EM   GLT + V   TL+    + G 
Sbjct: 366 MITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGR 425

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L   M  +     + T+ +L+DG CK G + +A   F  M    L P++A+Y  
Sbjct: 426 LREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNI 485

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID +CK   ++ AR LF E+  + ++P+   YT +I+   K     EAL     M   G
Sbjct: 486 LIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDG 545

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              D  +Y  ++ G  +      A  L  EM  RG + +
Sbjct: 546 CPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAE 584



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 98/208 (47%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M+  GL+ +    + L+D +        A S+  +M+   ++   VTF  LI+GLC
Sbjct: 117 LSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLC 176

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G   +A+++F      G  P V  YT +I+GLCK      A  LF +M +    P+  
Sbjct: 177 KVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVV 236

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  LID   K +   EAL++ + M    +  D+  Y SL+ GL      +EA  L +EM
Sbjct: 237 TYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEM 296

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEA 239
               I+P+      L+    + G + EA
Sbjct: 297 TSLNIMPNIFTFNVLVDAICKEGKVSEA 324



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 1/199 (0%)

Query: 49  TTLMDAYFKAGEPSEA-LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           T L+ A  K G+   A +SL  +M  + +   + T  +LID       V  A   F +M 
Sbjct: 98  TKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMI 157

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             GL P+   +  LI+GLCK     +A   FD+       P    YT +I+G  K     
Sbjct: 158 KLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETT 217

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A  L  +M E G   ++  Y  L+  L +   + EA  +F  M  + I PD     SL+
Sbjct: 218 AAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLI 277

Query: 228 KKHYERGNMDEAIELQNEM 246
           +         EA  L NEM
Sbjct: 278 QGLCNFRRWKEASALLNEM 296



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 61/146 (41%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL  Y  ++ G C E     +  L   M+   L  +  +   L+DA  K G   +A  L 
Sbjct: 444 DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLF 503

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            E+    +   V  +  +I+ LCK GL+ EA++ F  M   G  P+   Y  +I G  + 
Sbjct: 504 SELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQY 563

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYT 154
               RA  L  EM  R  + +    T
Sbjct: 564 KDESRAAQLIGEMRDRGFVAEAGTTT 589


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 141/288 (48%), Gaps = 35/288 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  ++  Y  +++G CI    +++  LL+EMK   +  +     TL+DA  K G+   
Sbjct: 232 KGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKA 291

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +L  M+ + I+  VVT+  LIDG      V+ A   F  M   G+ PNV  YT +ID
Sbjct: 292 AKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMID 351

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK+  ++ A +LF+EM  ++MIPD   YT+LIDG  K+   + A+ L  +M E G+  
Sbjct: 352 GLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQP 411

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMI------------------------------- 212
           D+ +YT L+  L + G L+ A+  F  ++                               
Sbjct: 412 DVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLK 471

Query: 213 ----GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
               G+G +PD I   +++   +E+   D+A ++  EM+ RGL    K
Sbjct: 472 SKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARK 519



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 130/253 (51%), Gaps = 2/253 (0%)

Query: 2   KGKNIKADLPLYGTIIWGL--CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           K +N KA+  L   I  GL    + + +++K++L+ M +  +  + V   TLMD YF   
Sbjct: 496 KDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVN 555

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           E   A  +   M    +   V  + ++IDGLCK   V EA+  F  M    + PN+  YT
Sbjct: 556 ELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYT 615

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LID LCK + +ERA  L  EM +  + PD  +YT L+DG  K    + A  +  R+   
Sbjct: 616 SLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVK 675

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G  L++  YT+++  L + G   EA  L  +M  +G +PD +    ++   +E+   D+A
Sbjct: 676 GYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKA 735

Query: 240 IELQNEMMGRGLL 252
            ++  EM+ RGL+
Sbjct: 736 EKILXEMIARGLM 748



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 111/214 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK D+  YGT++ G  + ++ + +K +   M + G+T N    T ++D   K     EA+
Sbjct: 537 IKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAM 596

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL +EM    +   +VT+  LID LCK+  +  AI     M + G+ P+V  YT L+DGL
Sbjct: 597 SLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGL 656

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +E A+ +F  +  +    +   YTA+I+   K   F EAL+L+ +M + G   D 
Sbjct: 657 CKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDA 716

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             +  ++W L       +A  +  EMI RG++ +
Sbjct: 717 VTFDIIIWALFEKDENDKAEKILXEMIARGLMKE 750



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 119/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC   + +    LL +++ + +  + V+  T++ +  K     +A  L  EM+
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  L+ G C  G ++EA      M    ++P+V  +  LID L K+  ++
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +   M K  + PD   Y +LIDGY      K A  +   M + GV  ++  YT+++
Sbjct: 291 AAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMI 350

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +   + EA  LF EM  + ++PD +   SL+    +  +++ AI L  +M  +G+
Sbjct: 351 DGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 409



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 112/239 (46%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
            T+I GLC   + + +     ++   G   N V   TL++   K GE      LL ++  
Sbjct: 137 NTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEG 196

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             ++  VV +  +I  LCK+ L+ +A D +  M   G+ PNV  Y AL+ G C    ++ 
Sbjct: 197 HSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKE 256

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A +L +EM  +++ PD   +  LID   K    K A  +   M +  +  D+  Y SL+ 
Sbjct: 257 AFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLID 316

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G      ++ A+ +F+ M   G+ P+     +++    +   +DEA+ L  EM  + ++
Sbjct: 317 GYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMI 375



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 106/220 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+ + + G   N +   TL+      GE  +AL   D+++    ++  V++  LI+GLC
Sbjct: 120 VLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLC 179

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G  +       ++    + P+V +Y  +I  LCK   +  A +L+ EM  + + P+  
Sbjct: 180 KTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVV 239

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y AL+ G+      KEA +L N M    ++ D+  + +L+  L + G ++ A+++   M
Sbjct: 240 TYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVM 299

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   I PD +   SL+  ++    +  A  +   M   G+
Sbjct: 300 MKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGV 339



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 94/208 (45%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  + + NG T +      LM+ +      + A S+L  +L        +T   LI GLC
Sbjct: 85  LFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLC 144

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G +++A+ +  ++   G   N   Y  LI+GLCK    +    L  ++    + PD  
Sbjct: 145 FRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVV 204

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  +I    K++   +A +L + M   G+  ++  Y +LV+G    GHL+EA  L +EM
Sbjct: 205 MYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEM 264

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEA 239
             + I PD     +L+    + G M  A
Sbjct: 265 KLKNINPDVCTFNTLIDALGKEGKMKAA 292



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK KN+  ++  Y ++I  LC     E +  LL EMKE+G+  +    T L+D   K+G 
Sbjct: 602 MKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGR 661

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +   +L     + V  +  +I+ LCK+GL  EA+D   +M D G  P+   +  
Sbjct: 662 LEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDI 721

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           +I  L +K+  ++A  +  EM  R ++ +
Sbjct: 722 IIWALFEKDENDKAEKILXEMIARGLMKE 750



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 74/165 (44%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           T  +L++  C    +  A      +   G HPN      LI GLC +  I++A    D++
Sbjct: 100 TLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQV 159

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
             +    +  +Y  LI+G  K    K    L  ++    V  D+  Y +++  L +   L
Sbjct: 160 VAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLL 219

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +A  L+ EMI +GI P+ +   +L+      G++ EA  L NEM
Sbjct: 220 GDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEM 264



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 80/188 (42%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A++  D ML  R       F  ++  L  +      I  F +    G  P++     L++
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             C    I  A ++   + KR   P+      LI G       K+AL   +++   G  L
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +  +Y +L+ GL + G  +    L  ++ G  + PD ++  +++    +   + +A +L 
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 244 NEMMGRGL 251
           +EM+ +G+
Sbjct: 227 SEMIVKGI 234


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 133/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN + ++  Y TII  LC + +  ++  L SEM   G++ +     +L+ A     E
Sbjct: 281 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL+EM++S+I   VV F  ++D LCK G++  A D    M   G+ P+V  YTA
Sbjct: 341 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A  +FD M  +  +P+  +Y  LI+GY + +   +A+ L  +M+  G
Sbjct: 401 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 460

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +L+ GL   G LQ A  LFHEM+  G +PD +    LL    +  ++ EA+
Sbjct: 461 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 520

Query: 241 ELQNEMMGRGL 251
            L   + G  L
Sbjct: 521 VLLKAIEGSNL 531



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 119/248 (47%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+  + D+  YGT++ GLC       +  LL  M +     N +   T++D+  K  + +
Sbjct: 248 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 307

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA +L  EM+   I   + T+  LI  LC     +        M +  + PNV V++ ++
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK+  I  A ++ D M KR + PD   YTAL+DG+       EA+ + + M   G  
Sbjct: 368 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 427

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++ +Y  L+ G  +   + +A  L  +M  +G++ D +   +L+      G +  AI L
Sbjct: 428 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 487

Query: 243 QNEMMGRG 250
            +EM+  G
Sbjct: 488 FHEMVASG 495



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y ++I  LC   +++    LL+EM  + +  N V+ +T++DA  K G 
Sbjct: 316 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 375

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  ++D M+   +E  VVT+  L+DG C    + EA+  F  M   G  PNV  Y  
Sbjct: 376 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 435

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+   +++A  L ++M  + +I DT  Y  LI G       + A+ L + M   G
Sbjct: 436 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 495

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y  L+  L +  HL EA VL   + G  +  D ++    +      G ++ A 
Sbjct: 496 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAAR 555

Query: 241 ELQNEMMGRGL 251
           +L + +  +GL
Sbjct: 556 DLFSNLSSKGL 566



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 117/257 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+     +I   C   +   +  +L+++ + G   +     TL+      G+
Sbjct: 176 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGK 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L D+ +    +  VVT+  L++GLCK G    AI     M      PNV  Y  
Sbjct: 236 IGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNT 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   +  A NLF EM  + + PD   Y +LI        +K    L N M    
Sbjct: 296 IIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK 355

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  ++++V  L + G +  A  +   MI RG+ PD +   +L+  H  R  MDEA+
Sbjct: 356 IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV 415

Query: 241 ELQNEMMGRGLLSGSKN 257
           ++ + M+ +G +   ++
Sbjct: 416 KVFDTMVHKGCVPNVRS 432



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 8/247 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C   + + +  LL +M   GL A+TV   TL+      G    A++L  EM+
Sbjct: 433 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 492

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S     +VT+ +L+D LCK+  + EA+     +    L  ++ VY   IDG+C+   +E
Sbjct: 493 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 552

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR+LF  +  + + PD   Y  +I G  K     EA  L  +M E G   D   Y +++
Sbjct: 553 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTII 612

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD--------EILCISLLKKHYERGNMDEAIELQN 244
            G  R      A  L  EM+  G   D        E+L    L + +ER  +    E   
Sbjct: 613 RGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERLRLRGVGEEDR 672

Query: 245 EMMGRGL 251
           E+  RG+
Sbjct: 673 ELHLRGV 679



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 94/196 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + AD   Y T+I GLC   + + +  L  EM  +G   + V    L+D   K   
Sbjct: 456 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 515

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA+ LL  +  S ++  ++ + + IDG+C++G +  A D F  +   GL P+V  Y  
Sbjct: 516 LAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNI 575

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK+  ++ A  LF +M +     D   Y  +I G+L+      A  L   M   G
Sbjct: 576 MIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEG 635

Query: 181 VDLDLNAYTSLVWGLS 196
              D++  T +V  LS
Sbjct: 636 FSADVSTTTLIVEMLS 651



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 113/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y  ++ G C+ S+ +++  +   M   G   N      L++ Y +   
Sbjct: 386 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQR 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL++M    +    VT+  LI GLC  G ++ AI  F  M   G  P++  Y  
Sbjct: 446 MDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRI 505

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK + +  A  L   +   ++  D   Y   IDG  +    + A +L + ++  G
Sbjct: 506 LLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 565

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  ++ GL + G L EA  LF +M   G   D  +  ++++          A 
Sbjct: 566 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGAT 625

Query: 241 ELQNEMMGRGL 251
           +L  EM+  G 
Sbjct: 626 QLLQEMLAEGF 636



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 102/220 (46%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++M   G+  +      L++++        A S+L ++L    +    TF  LI GLC
Sbjct: 172 LSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLC 231

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + EA+  F +    G  P+V  Y  L++GLCK      A  L   M +++  P+  
Sbjct: 232 VEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVI 291

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           AY  +ID   K     EA NL + M   G+  D+  Y SL+  L      +    L +EM
Sbjct: 292 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM 351

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   I+P+ ++  +++    + G +  A ++ + M+ RG+
Sbjct: 352 VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV 391



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 89/209 (42%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +TV  T L+ +  K    S  LSL  +M    I   V T  +LI+  C    +  A    
Sbjct: 149 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 208

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            ++   G  P+   +  LI GLC +  I  A +LFD+       PD   Y  L++G  K 
Sbjct: 209 AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKV 268

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
            +   A+ L   M +     ++ AY +++  L +   + EA  LF EMI +GI PD    
Sbjct: 269 GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTY 328

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            SL+              L NEM+   ++
Sbjct: 329 NSLIHALCNLCEWKHVTTLLNEMVNSKIM 357



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 83/189 (43%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +ALS  + ML      + V F  L+  + K       +    +M  FG+ P+V     LI
Sbjct: 133 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 192

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C    +  A ++  ++ K    PD T +  LI G        EAL+L ++    G  
Sbjct: 193 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQ 252

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y +L+ GL + G+   A  L   M+ +   P+ I   +++    +   + EA  L
Sbjct: 253 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNL 312

Query: 243 QNEMMGRGL 251
            +EM+ +G+
Sbjct: 313 FSEMITKGI 321



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K ++ D+  Y  +I GLC     +++  L  +M ENG + +  I  T++  + ++ E
Sbjct: 561 LSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNE 620

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
              A  LL EML       V T  ++++ L   GL
Sbjct: 621 TFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGL 655



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 52/123 (42%)

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A + F+ M      P T  +T L+    K + +   L+L  +M   G+  D+   
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+        L  A  +  +++  G  PD     +L++     G + EA+ L ++ +G
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248

Query: 249 RGL 251
            G 
Sbjct: 249 EGF 251


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 138/290 (47%), Gaps = 35/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T+I+ LC E    D++ L  EMKE G+  N      LM ++FK   
Sbjct: 199 MVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDN 258

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL    ++L   +    V F  LIDGLCK+  + EA + F  MP + + P V VY +
Sbjct: 259 IKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNS 318

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
           LI G  +    + A   F E+ ++++ PD                               
Sbjct: 319 LIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSG 378

Query: 150 ----TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                 AY  LID Y K  +  EAL    RM+EVGV+ ++  Y+SL+ G S+ G ++ A 
Sbjct: 379 IALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAM 438

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            ++ EM+ +G+ P+ +   +L+  H + G+MD A  LQ EM  +G+ S +
Sbjct: 439 AIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNA 488



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 114/242 (47%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           LP    I+ GL           L  EM   G+  + V   TL++A    G+ ++A  + D
Sbjct: 138 LPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWD 197

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           +M+  RI+  VVT+  +I  LC+   + +A   F  M + G+ PN+  Y AL+    K++
Sbjct: 198 QMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRD 257

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I+ A   + ++ K  ++P+   +T LIDG  K     EA N+   M    V   +  Y 
Sbjct: 258 NIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYN 317

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           SL+ G  R G+ QEA   F E+I + + PDE  C  +++   + G M  A      M   
Sbjct: 318 SLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQS 377

Query: 250 GL 251
           G+
Sbjct: 378 GI 379



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 6/258 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +   +P+Y ++I G       +++     E+    L  +   C+ ++      G+
Sbjct: 304 MPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQ 363

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A   L+ M  S I +    + VLID  CKSG + EA+    RM + G+ PNV  Y++
Sbjct: 364 MQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSS 423

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +E A  ++ EM  + + P+   YTALI G+ K+     A  L+  M E G
Sbjct: 424 LIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKG 483

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR------GILPDEILCISLLKKHYERG 234
           +  +    + LV GL R   +Q+A     E  G+        + + +  ++L+   Y  G
Sbjct: 484 IYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDG 543

Query: 235 NMDEAIELQNEMMGRGLL 252
             +EA    + M   G++
Sbjct: 544 QYNEACHFFSCMRDSGMV 561



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 112/238 (47%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++ T+I GLC  ++  ++K +  +M    +     +  +L+   F++G   EAL+   E+
Sbjct: 280 IFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   +     T  +++ GLC  G ++ A  +   M   G+  N A Y  LID  CK   +
Sbjct: 340 IRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNL 399

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A      M +  + P+   Y++LIDG+ K+   + A+ +   M   GV+ ++  YT+L
Sbjct: 400 DEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTAL 459

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           + G ++ G +  A  L  EM  +GI  + I    L+        + +A+    E  G+
Sbjct: 460 IHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQ 517



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 8/243 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  +   Y  +I   C     +++ +  + M E G+  N V  ++L+D + K GE
Sbjct: 374 MQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGE 433

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+++  EM+   +E  VVT+  LI G  K+G +  A      M + G++ N    + 
Sbjct: 434 MEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSV 493

Query: 121 LIDGLCKKNCIERARNLFDEMP------KRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           L+DGLC++N ++ A     E        K   I ++  Y  LI G      + EA +  +
Sbjct: 494 LVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFS 553

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M + G+  D   YT ++ GL   G++  A +L+ +M+  G+ P +  C  +    + R 
Sbjct: 554 CMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTK--CAMVCPDIWSRE 611

Query: 235 NMD 237
           ++D
Sbjct: 612 SVD 614



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 6/254 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K ++ D      ++ GLC   + + +   L  M+++G+  N      L+D Y K+G   E
Sbjct: 342 KELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDE 401

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL     M +  +E  VVT+  LIDG  K+G +  A+  +  M   G+ PNV  YTALI 
Sbjct: 402 ALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIH 461

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL-----KNRMTE 178
           G  K   ++ A  L  EM ++ +  +    + L+DG  +    ++A+         + +E
Sbjct: 462 GHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSE 521

Query: 179 VGVDL-DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
               + +   Y +L++GL   G   EA   F  M   G++PD      +++     G + 
Sbjct: 522 KNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVL 581

Query: 238 EAIELQNEMMGRGL 251
            A+ L  +M+  G+
Sbjct: 582 NAMMLYADMVKVGV 595



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 3/168 (1%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VL+  L +  L  EA+  FGR+ +    P +    A++DGL K + + R   LFDEM  R
Sbjct: 111 VLVIALSQMALPDEALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEMLGR 167

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            M+P    Y  LI+         +A  + ++M    +D ++  YT++++ L     + +A
Sbjct: 168 GMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDA 227

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             LF EM   G+ P+     +L+  H++R N+  A+    +++  GL+
Sbjct: 228 EGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLV 275


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/244 (36%), Positives = 130/244 (53%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G N K  +  Y  II  LC + + ++++ L  EMK  G+T   +  T+L+  +   G+  
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWE 294

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA  L +EM++  ++  VVTF VLID LCK G V EA D    M   G+ PN+  Y +LI
Sbjct: 295 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 354

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +G C    +  AR LF  MP +   PD   YT LI+GY K    +EA+ L N M +VG  
Sbjct: 355 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 414

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y +L+ GL + G + +A+ LF  M   GI  D  +    L    + G + EA+EL
Sbjct: 415 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 474

Query: 243 QNEM 246
            N++
Sbjct: 475 FNKL 478



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 123/248 (49%), Gaps = 6/248 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC+E +   + LL + M++ G T N +   TLM    + G  S AL L 
Sbjct: 165 DIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLH 224

Query: 69  DEMLDS------RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            EML+         +  V+++ ++ID LCK     EA D F  M   G+ P V  YT+LI
Sbjct: 225 QEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLI 284

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C     E A+ LF+EM  + + P+   +  LID   K     EA +L   M + G+ 
Sbjct: 285 HGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIV 344

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +L  Y SL+ G    G L  AR LF  M  +G  PD I    L+  + +   ++EA++L
Sbjct: 345 PNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKL 404

Query: 243 QNEMMGRG 250
            N M+  G
Sbjct: 405 YNGMLQVG 412



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 121/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +L  Y ++I G C+      ++ L   M   G   + +  T L++ Y K  +
Sbjct: 338 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK 397

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L + ML       V T+  L+ GL + G V +A   FG M  +G+  ++ +Y  
Sbjct: 398 VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGI 457

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            ++GLCK  C+  A  LF+++   ++  D   +  LIDG  K    + A  L  ++ +  
Sbjct: 458 FLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEE 517

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  ++    R G + +A +LF +M   G  PD+I   +L++  +E   +++ +
Sbjct: 518 LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVV 577

Query: 241 ELQNEMMGR 249
           EL + M+ R
Sbjct: 578 ELLHMMVQR 586



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 2/243 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +   +  Y ++I G C   K+E++K L +EM   G+  N V    L+D   K G+
Sbjct: 268 MKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGK 327

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ M+   I   ++T+  LI+G C  G +  A + F  MP  G  P+V  YT 
Sbjct: 328 VIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTV 387

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK + +E A  L++ M +    PD   Y AL+ G  +     +A  L   M   G
Sbjct: 388 LINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYG 447

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS-LLKKHYERGNMDEA 239
           +  DL  Y   + GL + G L EA  LF+++    I  D I C + L+    + G ++ A
Sbjct: 448 IPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLD-IECFNCLIDGLCKAGKLETA 506

Query: 240 IEL 242
            EL
Sbjct: 507 WEL 509



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 105/219 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + D+  Y  +I G C  SK E++  L + M + G   +      L+   F+ G+
Sbjct: 373 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 432

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L   M    I   +  + + ++GLCK+G + EA++ F ++  + +  ++  +  
Sbjct: 433 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 492

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  LF+++P+ ++ PD   Y  +I  + +     +A  L  +M + G
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              D   Y +L+ G      L++   L H M+ R +  D
Sbjct: 553 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 90/180 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  YG ++ GL    K  D+K L   MK  G+  +  I    ++   K G   EA+ 
Sbjct: 414 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 473

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L +++    I++ +  F  LIDGLCK+G +  A + F ++P   L P+V  Y  +I   C
Sbjct: 474 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 533

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +   + +A  LF +M K    PD   Y  LI G+ + +  ++ + L + M +  V LD+N
Sbjct: 534 RGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVN 593



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 6/258 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N    L  +  ++ GL     +     L ++M+ +G++ +      L++       
Sbjct: 87  MMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNR 146

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E L+++  +L       +VT+  LI GLC    + +A   F RM   G  PN   Y  
Sbjct: 147 VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGT 206

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI------PDTTAYTALIDGYLKHESFKEALNLKN 174
           L+ GLC+   I  A  L  EM     +      P   +Y+ +ID   K     EA +L  
Sbjct: 207 LMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFE 266

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M   G+   + +YTSL+ G    G  +EA+ LF+EM+ +G+ P+ +    L+    + G
Sbjct: 267 EMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEG 326

Query: 235 NMDEAIELQNEMMGRGLL 252
            + EA +L   M+ RG++
Sbjct: 327 KVIEAKDLLEVMIQRGIV 344



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 87/231 (37%), Gaps = 41/231 (17%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           ++A      M+ S     + +F  L+ GL K     +    + +M   G+ P+      L
Sbjct: 78  TQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNIL 137

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++ LC  N +     +   + +R  IPD   YT LI G        +A  L  RM ++G 
Sbjct: 138 LNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGC 197

Query: 182 DLDLNAYTSLVWGLSRCGHLQ--------------------------------------- 202
             +   Y +L+ GL R G++                                        
Sbjct: 198 TPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRR 257

Query: 203 --EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             EAR LF EM  +G+ P  I   SL+      G  +EA  L NEM+ +G+
Sbjct: 258 EDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGV 308



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 2/166 (1%)

Query: 91  CKSGLVR--EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           CK+G +   +A  +F  M      P ++ +T L+ GL K     +   L+++M    + P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D      L++         E L +   +   G   D+  YT+L+ GL     + +A +LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             M   G  P+ I   +L+K     GN+  A++L  EM+    L G
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYG 235


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 133/242 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+KAD+  Y TII  LC +   + +  L  EM+  G+ ++ V   +L+    KAG+
Sbjct: 196 MDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGK 255

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++ + LL +M   +I   V+TF VLID   K G ++EA + +  M   G+ PN   Y +
Sbjct: 256 WNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNS 315

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C +N +  A N+ D M + +  PD   +T+LI GY K +   E + L  ++++ G
Sbjct: 316 LMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRG 375

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y+ LV G  + G L+ A  LF EM+  G+LPD +    LL    + G +++A+
Sbjct: 376 LVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKAL 435

Query: 241 EL 242
           E+
Sbjct: 436 EI 437



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GLC+ESK  ++ +L++ M ENG   N V   ++++   K+G+ S AL 
Sbjct: 132 EPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALD 191

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M +  ++  V T+  +ID LC+ G +  AI  F  M   G+  ++  Y +L+ GLC
Sbjct: 192 LLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLC 251

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K         L  +M  R +IP+   +  LID ++K    +EA  L   M   G+  +  
Sbjct: 252 KAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTI 311

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y SL+ G      L EA  +   M+     PD +   SL+K + +   +DE ++L  ++
Sbjct: 312 TYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKI 371

Query: 247 MGRGLLSGS 255
             RGL++ +
Sbjct: 372 SKRGLVANT 380



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  +   Y +++ G C++++  ++  +L  M  N  + + V  T+L+  Y K   
Sbjct: 301 MITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKR 360

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L  ++    +    VT+ +L+ G C+SG +  A + F  M   G+ P+V  Y  
Sbjct: 361 VDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGI 420

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +E+A  +F+++ K  M  D   YT +I+G  K    ++A NL   +   G
Sbjct: 421 LLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKG 480

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YT ++ GL + G L EA +L  +M   G  P++    +L++ H   G++  + 
Sbjct: 481 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASA 540

Query: 241 ELQNEMMGRGL 251
           +L  EM   G 
Sbjct: 541 KLIEEMKSCGF 551



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 124/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  +  +I     E K +++  L  EM   G++ NT+   +LMD Y     
Sbjct: 266 MTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNR 325

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA ++LD M+ +     +VTF  LI G CK   V E +  F ++   GL  N   Y+ 
Sbjct: 326 LSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSI 385

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+   +E A  LF EM    ++PD   Y  L+DG   +   ++AL +   + +  
Sbjct: 386 LVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 445

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++LD+  YT ++ G+ + G +++A  LF  +  +G+ P+ +    ++    ++G++ EA 
Sbjct: 446 MNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEAN 505

Query: 241 ELQNEM 246
            L  +M
Sbjct: 506 ILLRKM 511



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K IK+ L  Y +++ GLC   K+ D   LL +M    +  N +    L+D + K G+
Sbjct: 231 METKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGK 290

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM+   I    +T+  L+DG C    + EA +    M      P++  +T+
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++    LF ++ KR ++ +T  Y+ L+ G+ +    + A  L   M  +G
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y  L+ GL   G L++A  +F ++    +  D ++   +++   + G +++A 
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAW 470

Query: 241 ELQNEMMGRGL 251
            L   +  +G+
Sbjct: 471 NLFCSLPCKGV 481



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 106/217 (48%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +M+ NG+  N      +++ + +  +   A S+L +++    E    TF  LI+GLC   
Sbjct: 90  KMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLES 149

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            V EA+    RM + G  PNV  Y ++++G+CK      A +L  +M +R++  D   Y+
Sbjct: 150 KVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYS 209

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +ID   +      A++L   M   G+   L  Y SLV GL + G   +   L  +M  R
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR 269

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            I+P+ I    L+    + G + EA EL  EM+ +G+
Sbjct: 270 KIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGI 306



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 112/219 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N   D+  + ++I G C   + ++   L  ++ + GL ANTV  + L+  + ++G+
Sbjct: 336 MVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGK 395

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EM+   +   V+T+ +L+DGLC +G + +A++ F  +    ++ ++ +YT 
Sbjct: 396 LEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTI 455

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   +E A NLF  +P + + P+   YT +I G  K  S  EA  L  +M E G
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            + +   Y +L+    R G L  +  L  EM   G   D
Sbjct: 516 NEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 554



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 113/219 (51%), Gaps = 2/219 (0%)

Query: 21  CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           C ++ F  S  +L ++ + G   +T    TL++      + SEA+ L+  M+++  +  V
Sbjct: 113 CCKTCFAYS--VLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNV 170

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           VT+  +++G+CKSG    A+D   +M +  +  +V  Y+ +ID LC+  CI+ A +LF E
Sbjct: 171 VTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 230

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M  + +      Y +L+ G  K   + + + L   MT   +  ++  +  L+    + G 
Sbjct: 231 METKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGK 290

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           LQEA  L+ EMI +GI P+ I   SL+  +  +  + EA
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEA 329



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 7/197 (3%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + + A+   Y  ++ G C   K E ++ L  EM   G+  + +    L+D     G+  +
Sbjct: 374 RGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEK 433

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL + +++  S++ + +V + ++I+G+CK G V +A + F  +P  G+ PNV  YT +I 
Sbjct: 434 ALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 493

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCKK  +  A  L  +M +    P+   Y  LI  +L+      +  L   M   G   
Sbjct: 494 GLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 553

Query: 184 D-------LNAYTSLVW 193
           D       ++  +S VW
Sbjct: 554 DASSIKMVIDMLSSAVW 570



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 104/240 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG  +    ++ K +D+  L  EM  +    + V  +          + +  L    +M 
Sbjct: 33  YGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKME 92

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + I   + T  ++I+  C+      A    G++   G  P+   +  LI+GLC ++ + 
Sbjct: 93  LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVS 152

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M +    P+   Y ++++G  K      AL+L  +M E  V  D+  Y++++
Sbjct: 153 EAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTII 212

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L R G +  A  LF EM  +GI    +   SL+    + G  ++ ++L  +M  R ++
Sbjct: 213 DSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKII 272



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L  EM+ SR   ++V F     G+  +      +D+  +M   G+  N+     +I
Sbjct: 48  DAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMI 107

Query: 123 DGLCK--KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +  C+  K C   A ++  ++ K    PDTT +  LI+G        EA+ L  RM E G
Sbjct: 108 NCFCRCCKTCF--AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENG 165

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y S+V G+ + G    A  L  +M  R +  D     +++      G +D AI
Sbjct: 166 CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAI 225

Query: 241 ELQNEMMGRGLLS 253
            L  EM  +G+ S
Sbjct: 226 SLFKEMETKGIKS 238



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 52/125 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++   +  D+ +Y  II G+C   K ED+  L   +   G+  N +  T ++    K G 
Sbjct: 441 LQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  LL +M +   E    T+  LI    + G +  +      M   G   + +    
Sbjct: 501 LSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 560

Query: 121 LIDGL 125
           +ID L
Sbjct: 561 VIDML 565


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 132/246 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K ++ +Y TII  LC +    ++   LSEM   G++ N V  ++++  +   G 
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA SL  +M++  +    VTF +L+DGL K G++ EA   F  M + G+ PNV  Y A
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A+ LF+ M ++   P   +Y  LI G+ K     EA  L   M+   
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y++L+ G  + G  Q+A+ L  EM   G+LPD +    +L    ++G++DEA 
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAF 347

Query: 241 ELQNEM 246
           EL   M
Sbjct: 348 ELLKAM 353



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 124/246 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y TII GLC       +  LL +M+E G   N V+ +T++D+  K    +EA+ 
Sbjct: 79  EPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAME 138

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
            L EM++  I   VVT+  ++ G C  G   EA   F +M +  + P+   +  L+DGL 
Sbjct: 139 FLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLS 198

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+  I  A+ +F+ M ++ + P+   Y AL+DGY       EA  L N M   G    + 
Sbjct: 199 KEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVR 258

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +Y  L+ G  + G + EA+ L  EM  + + PD +   +L+K   + G   +A +L  EM
Sbjct: 259 SYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM 318

Query: 247 MGRGLL 252
              GLL
Sbjct: 319 RSYGLL 324



 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 127/239 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ GL  ++K  D+  L  EM + G   + +  +T+++   K G  + A+ LL +M 
Sbjct: 50  FSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKME 109

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +  VV +  +ID LCK  L+ EA+++   M + G+ PNV  Y++++ G C      
Sbjct: 110 EKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSN 169

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +LF +M +R+++PDT  +  L+DG  K     EA  +   M E GV+ ++N Y +L+
Sbjct: 170 EATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALM 229

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G      + EA+ LF+ M+ +G  P       L+K H + G +DEA  L  EM  + L
Sbjct: 230 DGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 106/207 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C   + +++K LL+EM    LT +TV  +TLM  + + G P +A  LL+EM 
Sbjct: 260 YNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR 319

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   ++T+ +++DGLCK G + EA +    M +  + PN+ +YT LI G+C    +E
Sbjct: 320 SYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLE 379

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR LF  +  + + PD   YT +I G LK     EA  L   M   G   +   Y  ++
Sbjct: 380 AARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVII 439

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
            G  R G    A  L  EM+GRG   D
Sbjct: 440 QGFLRNGDTSNAGRLIEEMVGRGFSAD 466



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 125/248 (50%), Gaps = 2/248 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESK--FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           NI+ D+     +I   C  +   F  +  +L  M + GL  N V  +TL++      +  
Sbjct: 5   NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L DEM+    E  V+T+  +I+GLCK G    AI    +M + G  PNV VY+ +I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK   I  A     EM  R + P+   Y++++ G+       EA +L  +M E  V 
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   +  LV GLS+ G + EA+ +F  MI +G+ P+     +L+  +  +  MDEA +L
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 243 QNEMMGRG 250
            N M+ +G
Sbjct: 245 FNIMVRKG 252



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 118/255 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  D   +  ++ GL  E    +++ +   M E G+  N      LMD Y    +
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L + M+      +V ++ +LI G CKSG + EA      M    L P+   Y+ 
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+    + A+ L +EM    ++PD   Y+ ++DG  K     EA  L   M E  
Sbjct: 298 LMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESK 357

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  YT L+ G+   G L+ AR LF  +  +GI PD +    ++    + G  +EA 
Sbjct: 358 IEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEAC 417

Query: 241 ELQNEMMGRGLLSGS 255
           EL  +M   G L  S
Sbjct: 418 ELFRDMAVHGCLPNS 432



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 120/252 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K ++ ++  Y  ++ G C +S+ ++++ L + M   G   +      L+  + K+G   E
Sbjct: 216 KGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDE 275

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EM    +    VT+  L+ G C+ G  ++A      M  +GL P++  Y+ ++D
Sbjct: 276 AKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLD 335

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK+  ++ A  L   M +  + P+   YT LI G       + A  L + +   G+  
Sbjct: 336 GLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQP 395

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  YT ++ GL + G   EA  LF +M   G LP+      +++     G+   A  L 
Sbjct: 396 DVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLI 455

Query: 244 NEMMGRGLLSGS 255
            EM+GRG  + S
Sbjct: 456 EEMVGRGFSADS 467



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 92/191 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y T++ G C + + +D++ LL EM+  GL  + +  + ++D   K G 
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M +S+IE  +  + +LI G+C  G +  A + F  +   G+ P+V  YT 
Sbjct: 343 LDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTV 402

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GL K      A  LF +M     +P++  Y  +I G+L++     A  L   M   G
Sbjct: 403 MISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462

Query: 181 VDLDLNAYTSL 191
              D + +  L
Sbjct: 463 FSADSSTFQML 473



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 91/188 (48%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+L  M    ++   VTF  L++GL     + +A+  F  M   G  P+V  Y+ +I+
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK      A  L  +M ++   P+   Y+ +ID   K +   EA+   + M   G+  
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y+S++ G    G   EA  LF +M+ R ++PD +    L+    + G + EA  + 
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210

Query: 244 NEMMGRGL 251
             M+ +G+
Sbjct: 211 ETMIEKGV 218



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 2/181 (1%)

Query: 74  SRIEVTVVTFCVLIDGLCKSGL--VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           S I   V T  +LI+  C S       A    G M   GL PN   ++ L++GL  K  I
Sbjct: 4   SNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKI 63

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  LFDEM K    PD   Y+ +I+G  K  S   A+ L  +M E G   ++  Y+++
Sbjct: 64  IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  L +   + EA     EM+ RGI P+ +   S+L      G  +EA  L  +M+ R +
Sbjct: 124 IDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNV 183

Query: 252 L 252
           +
Sbjct: 184 M 184



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 71/158 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  DL  Y  ++ GLC +   +++  LL  M+E+ +  N  I T L+      G+
Sbjct: 318 MRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGK 377

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L   +    I+  VVT+ V+I GL K GL  EA + F  M   G  PN   Y  
Sbjct: 378 LEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNV 437

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           +I G  +      A  L +EM  R    D++ +  L D
Sbjct: 438 IIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D+  Y ++I GLC   K E++K  L EM E GL  N      L+  Y K+GE
Sbjct: 507 MDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGE 566

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EML   I    V    LIDG CK G   EA   F  M    +HP+V  Y+A
Sbjct: 567 MQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSA 626

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL +   ++ A  L  E  ++ ++PD   Y ++I G+ K     +A  L   M + G
Sbjct: 627 LIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKG 686

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ GL + G ++ AR LF  + G+G+  + +   +++  + + GN+ +A 
Sbjct: 687 ISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAF 746

Query: 241 ELQNEMMGRGL 251
            L +EM  +G+
Sbjct: 747 RLFDEMTLKGV 757



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  N+       G II GLC     ED+  +   M   G+  N VI TTL+  + + G 
Sbjct: 437 MKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGR 496

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +L  M    ++  V+ +  +I GLCKS  + EA DY   M + GL PNV  Y A
Sbjct: 497 FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGA 556

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++ A   F EM    + P+    TALIDGY K  S  EA ++   M    
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y++L+ GL R G LQ A  L  E + +G++PD     S++    ++G + +A 
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAF 676

Query: 241 ELQNEMMGRGL 251
           +L   M  +G+
Sbjct: 677 QLHEYMCQKGI 687



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+++  D+  Y  +I GL    K + +  LLSE  E GL  +     +++  + K G 
Sbjct: 612 MLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGG 671

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L + M    I   ++T+  LI+GLCK+G +  A + F  +P  GL  N   Y  
Sbjct: 672 IGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYAT 731

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG CK   + +A  LFDEM  + + PD+  Y+ALIDG  K  + ++AL+L     + G
Sbjct: 732 IIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                ++  +L+ G  + G + EA  L  +M+ + + PD +    L+  H + G + EA 
Sbjct: 792 F-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAE 850

Query: 241 ELQNEMMGRGLLSGS 255
           +   +M  R L+  +
Sbjct: 851 QFFVDMQKRNLMPNA 865



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K +L  Y  ++ G+C     E +  LL+EM   G+  +T     +++ Y K   
Sbjct: 367 MLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQN 426

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S    LL EM  S +  T  T  ++I+GLC+ G + +A   F  M   G+ PN  +YT 
Sbjct: 427 TSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTT 486

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  ++   + A  +   M K+ + PD   Y ++I G  K    +EA +    M E G
Sbjct: 487 LIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERG 546

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ G  + G +Q A   F EM+G GI P++++C +L+  + + G+  EA 
Sbjct: 547 LKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEAT 606

Query: 241 ELQNEMMGRGL 251
            +   M+GR +
Sbjct: 607 SIFRCMLGRSV 617



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 130/252 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +K ++  YG +I G C   + + +     EM   G+  N V+CT L+D Y K G  +E
Sbjct: 545 RGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTE 604

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+   ML   +   V T+  LI GL ++G ++ A++      + GL P+V  Y ++I 
Sbjct: 605 ATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIIS 664

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK+  I +A  L + M ++ + P+   Y ALI+G  K    + A  L + +   G+  
Sbjct: 665 GFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAH 724

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y +++ G  + G+L +A  LF EM  +G+ PD  +  +L+    + GN ++A+ L 
Sbjct: 725 NAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLF 784

Query: 244 NEMMGRGLLSGS 255
            E + +G  S S
Sbjct: 785 LESVQKGFASTS 796



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 4/253 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K + AD+  Y  +I G   + +  ++KL+L EM   GL    V  T L+D + + G+
Sbjct: 297 MDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGD 356

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + +EML   +++ + T+  L+ G+CK G + +A      M   G+ P+   Y  
Sbjct: 357 SGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNN 416

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA--LIDGYLKHESFKEALNLKNRMTE 178
           +I+G  K+    R ++L  EM K +++P  TAYT   +I+G  +H S ++A  +   M  
Sbjct: 417 MIEGYLKEQNTSRVKDLLSEMKKSNLVP--TAYTCGMIINGLCRHGSIEDASRVFEIMVS 474

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
           +GV  +   YT+L+ G  + G  QEA  +   M  +G+ PD +   S++    +   M+E
Sbjct: 475 LGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEE 534

Query: 239 AIELQNEMMGRGL 251
           A +   EM+ RGL
Sbjct: 535 AKDYLVEMIERGL 547



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 130/246 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +  +Y T+I G   E +F+++  +L  M + G+  + +   +++    K+ +  EA 
Sbjct: 477 VKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAK 536

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             L EM++  ++  V T+  LI G CKSG ++ A  YF  M   G+ PN  V TALIDG 
Sbjct: 537 DYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGY 596

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+     A ++F  M  R + PD   Y+ALI G L++   + A+ L +   E G+  D+
Sbjct: 597 CKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV 656

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y S++ G  + G + +A  L   M  +GI P+ I   +L+    + G ++ A EL + 
Sbjct: 657 FTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDG 716

Query: 246 MMGRGL 251
           + G+GL
Sbjct: 717 IPGKGL 722



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 112/204 (54%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           T L++A+F+AG   E   LL EM +     ++VT+ V+I GLC++G V EA +    M  
Sbjct: 240 THLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDK 299

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            GL  +V  Y+ LIDG  K+     A+ + +EM  + + P   AYTALIDG+++     E
Sbjct: 300 KGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGE 359

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A  +K  M   GV L+L  Y +LV G+ + G +++A  L +EMI  GI PD     ++++
Sbjct: 360 AFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIE 419

Query: 229 KHYERGNMDEAIELQNEMMGRGLL 252
            + +  N     +L +EM    L+
Sbjct: 420 GYLKEQNTSRVKDLLSEMKKSNLV 443



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 127/253 (50%), Gaps = 4/253 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K     L  Y  +I GLC   + +++  L   M + GL A+    + L+D + K   
Sbjct: 262 MEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKR 321

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  +L+EM    ++   V +  LIDG  + G   EA      M   G+  N+  Y A
Sbjct: 322 CTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNA 381

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G+CK   +E+A  L +EM    + PDT  Y  +I+GYLK ++     +L + M +  
Sbjct: 382 LVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKK-- 439

Query: 181 VDLDLNAYTS--LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            +L   AYT   ++ GL R G +++A  +F  M+  G+ P+ ++  +L+K H + G   E
Sbjct: 440 SNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQE 499

Query: 239 AIELQNEMMGRGL 251
           A+ +   M  +G+
Sbjct: 500 AVRILKVMDKKGV 512



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 116/247 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK D   Y  +I G   E      K LLSEMK++ L      C  +++   + G   +A 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + + M+   ++   V +  LI G  + G  +EA+     M   G+ P+V  Y ++I GL
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +E A++   EM +R + P+   Y ALI GY K    + A      M   G+  + 
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
              T+L+ G  + G   EA  +F  M+GR + PD     +L+      G +  A+EL +E
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSE 646

Query: 246 MMGRGLL 252
            + +GL+
Sbjct: 647 FLEKGLV 653



 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 120/247 (48%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D  +Y  +I G   E   E +  L  E  + G  A+T     LMD + K+G+
Sbjct: 752 MTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSLNALMDGFCKSGK 810

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL++M+D  ++   VT+ +LID  CK+G ++EA  +F  M    L PN   YTA
Sbjct: 811 VIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTA 870

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G            LFDEM  +D+ PD   ++ +ID +LK     + L L + M + G
Sbjct: 871 LLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKG 930

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            ++  N    L+  L R  H+ E   +  ++  +G+      C +L++  ++ G MD A 
Sbjct: 931 GNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAA 990

Query: 241 ELQNEMM 247
            +   M+
Sbjct: 991 RVLKSMV 997



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 36/248 (14%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK +  +   Y TII G C       +  L  EM   G+  ++ + + L+D   K G   
Sbjct: 719 GKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTE 778

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +ALSL  E +      T  +   L+DG CKSG V EA      M D  + P+   YT LI
Sbjct: 779 KALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILI 837

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D  CK   ++ A   F +M KR+++P+   YTAL+ GY          N+  R +E+   
Sbjct: 838 DYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGY----------NMAGRRSEM--- 884

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
                                   LF EMI + I PD +    ++  H + G+  + ++L
Sbjct: 885 ----------------------FALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKL 922

Query: 243 QNEMMGRG 250
            ++M+ +G
Sbjct: 923 VDDMLKKG 930



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 37/207 (17%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYF------------------------------------G 104
           V F +LIDG  K GL  EA+ +F                                    G
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            +    LH +V  YT LI+   +    +  + L  EM ++   P    Y  +I G  +  
Sbjct: 227 MLEANVLH-DVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAG 285

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
              EA  LK  M + G+  D+  Y+ L+ G  +     EA+++  EM  +G+ P  +   
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L+     +G+  EA  ++ EM+ RG+
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGV 372



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 75/158 (47%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+ +N+  +   Y  ++ G  +  +  +   L  EM    +  + V  + ++DA+ K G+
Sbjct: 856  MQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGD 915

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              + L L+D+ML     V+     VLID LC+   V E +    ++ + GL+ ++A  + 
Sbjct: 916  HVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCST 975

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
            L+    K   ++ A  +   M +   +PD+T    LI+
Sbjct: 976  LVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLIN 1013


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 125/242 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +NIK D   Y  II GLC     +++  L +EM+  G+T N +    L+  +  AG 
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   LL +M+  +I   VVTF VLID   K G +REA +    M   G+ P+   YT+
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+N +++A  + D M  +   P+   +  LI+GY K     + L L  +M+  G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y +L+ G    G L  A+ LF EM+ R + P+ +    LL    + G  ++A+
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493

Query: 241 EL 242
           E+
Sbjct: 494 EI 495



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 2/250 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K DL    T++ GLC+  K  ++ LL+ +M E G   N V    +++   K+G+ + A+ 
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M +  I++  V + ++IDGLCK G +  A + F  M   G+  N+  Y  LI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    L  +M KR + P+   ++ LID ++K    +EA  L   M   G+  D  
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNE 245
            YTSL+ G  +  HL +A  +   M+ +G  P+ I   ++L   Y + N +D+ +EL  +
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN-IRTFNILINGYCKANRIDDGLELFRK 428

Query: 246 MMGRGLLSGS 255
           M  RG+++ +
Sbjct: 429 MSLRGVVADT 438



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 128/238 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GLC+E +  ++  L+  M E G   + +   TL++    +G+ +EA+ L+D+M+
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +   VT+  +++ +CKSG    A++   +M +  +  +   Y+ +IDGLCK   ++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NLF+EM  + +  +   Y  LI G+     + +   L   M +  ++ ++  ++ L+
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               + G L+EA  L  EMI RGI PD I   SL+    +  ++D+A ++ + M+ +G
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 106/212 (50%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   NT+  +TL++     G  SEAL L+D M++   +  ++T   L++GLC SG   EA
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    +M ++G  PN   Y  +++ +CK      A  L  +M +R++  D   Y+ +IDG
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             KH S   A NL N M   G+  ++  Y  L+ G    G   +   L  +MI R I P+
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +    L+    + G + EA EL  EM+ RG+
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 100/211 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  ++  Y  +I G C   +++D   LL +M +  +  N V  + L+D++ K G+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM+   I    +T+  LIDG CK   + +A      M   G  PN+  +  
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK N I+    LF +M  R ++ DT  Y  LI G+ +      A  L   M    
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           V  ++  Y  L+ GL   G  ++A  +F ++
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKI 499



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 110/246 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I G C E+  + +  ++  M   G   N      L++ Y KA  
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L L  +M    +    VT+  LI G C+ G +  A + F  M    + PN+  Y  
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC     E+A  +F+++ K  M  D   Y  +I G        +A +L   +   G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V   +  Y  ++ GL + G L EA +LF +M   G  PD      L++ H   G+  +++
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598

Query: 241 ELQNEM 246
           +L  E+
Sbjct: 599 KLIEEL 604



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 108/218 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  +  +I     E K  +++ L  EM   G+  +T+  T+L+D + K   
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  ++D M+    +  + TF +LI+G CK+  + + ++ F +M   G+  +   Y  
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   +  A+ LF EM  R + P+   Y  L+DG   +   ++AL +  ++ +  
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           ++LD+  Y  ++ G+     + +A  LF  +  +G+ P
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + AD   Y T+I G C   K   +K L  EM    +  N V    L+D     GE
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + +++  S++E+ +  + ++I G+C +  V +A D F  +P  G+ P V  Y  
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCKK  +  A  LF +M +    PD   Y  LI  +L      +++ L   +   G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608

Query: 181 VDLDLNAYTSLVWGLS 196
             +D +    ++  LS
Sbjct: 609 FSVDASTIKMVIDMLS 624



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 99/232 (42%)

Query: 22  IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV 81
           ++ K +D+  L  +M  +      +  + L  A  K  +    L+L  +M    I   + 
Sbjct: 65  VDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLY 124

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           T  ++I+  C+   +  A    G++   G  PN   ++ LI+GLC +  +  A  L D M
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            +    PD      L++G        EA+ L ++M E G   +   Y  ++  + + G  
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
             A  L  +M  R I  D +    ++    + G++D A  L NEM  +G+ +
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296



 Score = 40.8 bits (94), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 49/98 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K  +  Y  +I GLC +    +++LL  +M+E+G   +      L+ A+   G+ ++
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           ++ L++E+      V   T  ++ID L    L +  +D
Sbjct: 597 SVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLD 634


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 136/254 (53%), Gaps = 3/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ ++  +  ++ GLC   K   +  ++ +MK  G++ N +   TL+D Y K G 
Sbjct: 146 MIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR 205

Query: 61  PS---EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
                +A ++L EM+   I    VT+ +LIDG CK   V  A+  FG M   GL PNV  
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y  LI+GLC    ++ A  L D+M   D+ P+   +  LI+G+ K+++  EA+NL N M 
Sbjct: 266 YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           + GVD +   YT+L+    + G +++A  L++ MI RGI P+      L+     +G++ 
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVK 385

Query: 238 EAIELQNEMMGRGL 251
            A  L NEM+ + L
Sbjct: 386 AARSLMNEMVSKKL 399



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 130/254 (51%), Gaps = 3/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIES---KFEDSKLLLSEMKENGLTANTVICTTLMDAYFK 57
           MK   +  ++  Y T+I G C      K   +  +L EM   G+  N V    L+D + K
Sbjct: 181 MKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK 240

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
               S A+ +  EM    +   VVT+ +LI+GLC  G V EA+    +M    L PNV  
Sbjct: 241 DENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVT 300

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           +  LI+G CK   +  A NLF++M K+ + P+   YT LID Y K    ++A  L N M 
Sbjct: 301 HNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMI 360

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           + G+  +++ Y  L+ GL R G ++ AR L +EM+ + +  D +    L+    ++G   
Sbjct: 361 DRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESR 420

Query: 238 EAIELQNEMMGRGL 251
           +A++L +EM  +GL
Sbjct: 421 KAVKLLDEMFEKGL 434



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 122/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  +   Y  +I G C +     +  +  EM+  GL  N V    L++     G+
Sbjct: 219 MVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGK 278

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L D+M+ S +E  VVT  VLI+G CK+  V EAI+ F  M   G+ PN   YT 
Sbjct: 279 VDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTT 338

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK   +E A  L++ M  R + P+ + Y  LI G  +    K A +L N M    
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  L+  L + G  ++A  L  EM  +G+ P  +   +L+  +   GN+  A+
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL 458

Query: 241 ELQNEMMGRG 250
            ++  M  +G
Sbjct: 459 IVRTRMERKG 468



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 133/252 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ ++  Y  +I GLC + K +++  L  +M  + L  N V    L++ + K   
Sbjct: 254 MQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKT 313

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA++L ++M    ++   +T+  LID  CK G + +A   +  M D G+ P V+ Y  
Sbjct: 314 VNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNC 373

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC+K  ++ AR+L +EM  + +  D   Y  LID   K    ++A+ L + M E G
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKG 433

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++     Y +L+ G  R G+L+ A ++   M  +G   + +    L+K    +G +++A 
Sbjct: 434 LNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDAN 493

Query: 241 ELQNEMMGRGLL 252
            L NEM+ RGL+
Sbjct: 494 GLLNEMLERGLV 505



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 114/219 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   +++ ++  +  +I G C      ++  L ++M++ G+  N +  TTL+DAY K G 
Sbjct: 289 MVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGR 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L + M+D  I   V T+  LI GLC+ G V+ A      M    L  +V  Y  
Sbjct: 349 MEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNI 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCKK    +A  L DEM ++ + P    Y  L+DGY +  + + AL ++ RM   G
Sbjct: 409 LIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKG 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              ++  +  L+ G    G L++A  L +EM+ RG++P+
Sbjct: 469 KQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPN 507



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 3/215 (1%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   + + C  L+    K  E  +   +  EM+  +IE+ V++F ++++GLCK G +  A
Sbjct: 115 GFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI---ERARNLFDEMPKRDMIPDTTAYTAL 156
            D    M  +G+ PNV  Y  LIDG CK   I    +A  +  EM  + + P+   Y  L
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNIL 234

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           IDG+ K E+   A+ +   M   G+  ++  Y  L+ GL   G + EA  L  +M+   +
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDL 294

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            P+ +    L+    +   ++EAI L N+M  +G+
Sbjct: 295 EPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGV 329



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 59/128 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K + AD+  Y  +I  LC + +   +  LL EM E GL  + V   TLMD Y + G 
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGN 453

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +   M     +  VVT  VLI G C  G + +A      M + GL PN   Y  
Sbjct: 454 LRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI 513

Query: 121 LIDGLCKK 128
           + + + +K
Sbjct: 514 IKEEMMEK 521


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 136/245 (55%), Gaps = 2/245 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y +I+ GLC + +  +++ LL EMK+ G+  N V  TTL+D+ FKAG   EA +  
Sbjct: 272 DVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQ 331

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +++   + + +V    L+DGL KS   +EA D F  +    L PN   YTALIDG CK 
Sbjct: 332 SQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKV 391

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +ER  +L  EM ++ + P+   Y+++I+GY K     EA+N+  +M +  +  +   Y
Sbjct: 392 GDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVY 451

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNEMM 247
             L+ G  + G  + A  L++EM   G+  + +L   +L  + +RG  MDEA EL  ++ 
Sbjct: 452 AILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVL-FDVLVNNLKRGKRMDEAEELLKDVT 510

Query: 248 GRGLL 252
            RGLL
Sbjct: 511 SRGLL 515



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 125/243 (51%), Gaps = 1/243 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C     E  + LL EM+E  +  N +  +++++ Y K G   EA++++ +ML
Sbjct: 381 YTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKML 440

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I      + +LIDG CK+G    A D +  M   GL  N  ++  L++ L +   ++
Sbjct: 441 DQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMD 500

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  ++  R ++ D   YT+L+DG+ K      ALN+   MTE  +  D+  Y  L+
Sbjct: 501 EAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLI 560

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL   G   EA+ ++  MI  G+ P++     ++K + ++G +D A+EL NEM    ++
Sbjct: 561 NGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIM 619

Query: 253 SGS 255
             S
Sbjct: 620 PSS 622



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 132/247 (53%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N++ADL  Y TII   C +   E+++ L  EM  NG   + V  +++++   K G  SEA
Sbjct: 233 NLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEA 292

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             LL EM    ++   V +  LID L K+G   EA     ++   G+  ++ + T L+DG
Sbjct: 293 QELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDG 352

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L K +  + A ++F  + K ++IP++  YTALIDGY K    +   +L   M E  ++ +
Sbjct: 353 LFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPN 412

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y+S++ G ++ G L EA  +  +M+ + I+P+  +   L+  + + G  + A +L N
Sbjct: 413 VITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYN 472

Query: 245 EMMGRGL 251
           EM   GL
Sbjct: 473 EMKLSGL 479



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 21/272 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  +++ D   Y T+IWG C       +   LS M +     +T+ C  L+  + + G 
Sbjct: 68  LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGL 127

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 ++D ++       V+ F  LIDG CK+G +  A+D   RM   GL  ++  Y  
Sbjct: 128 AKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNT 187

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTT---------------------AYTALIDG 159
           LI+G CK+   ++A++L  E+ +   + D+                       YT +I  
Sbjct: 188 LINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIIST 247

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           Y K    +EA  L   M   G   D+  Y+S+V GL + G L EA+ L  EM   G+ P+
Sbjct: 248 YCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPN 307

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   +L+   ++ G+  EA   Q++++ RG+
Sbjct: 308 HVAYTTLIDSLFKAGSAWEAFACQSQLVVRGM 339



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 126/278 (45%), Gaps = 35/278 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C + + +++  L +EMK + +  +++ C TL+    +AGE  +A+++L+EM 
Sbjct: 590 YNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMS 649

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   +V   VL++   KSG     +    ++ D GL  N   Y  LI   C+    +
Sbjct: 650 VMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTK 709

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL---------------------- 170
           +A ++   M +   + DT  Y ALI GY +    K+AL                      
Sbjct: 710 KATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLL 769

Query: 171 -------------NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
                         L ++M E G++ D + Y +L+ G  + G+ +E+  L+ EM+ +G +
Sbjct: 770 GGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFV 829

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           P       L+    + G MD+A EL NEM  RG+   S
Sbjct: 830 PKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSS 867



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 21/242 (8%)

Query: 31  LLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           L L  ++   +  +TV   T++  + + G  ++A   L  M+        +T  +L+ G 
Sbjct: 63  LALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGF 122

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           C+ GL +        +   G   +V  +  LIDG CK   +  A +L + M K  ++ D 
Sbjct: 123 CRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDI 182

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTE---------------------VGVDLDLNAYT 189
            +Y  LI+G+ K   + +A +L + ++E                     + ++ DL  YT
Sbjct: 183 VSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYT 242

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +++    +   L+EAR L+ EMI  G LPD +   S++    + G + EA EL  EM   
Sbjct: 243 TIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKM 302

Query: 250 GL 251
           G+
Sbjct: 303 GV 304



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 14/234 (5%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +   Y  +I   C     + +  +L  M  +G  A+TV    L+  Y ++    +AL
Sbjct: 688 LKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKAL 747

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +   +ML+  +   +VT+ +L+ GL  +GL+ E  + F +M + GL+P+ + Y  LI G 
Sbjct: 748 ATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGY 807

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K    + +  L+ EM  +  +P T+ Y  LI  + K     +A  L N M   GV    
Sbjct: 808 GKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSS 867

Query: 186 NAYTSLVWG---LSRCGHLQ---------EARVLFHEMIGRGILP--DEILCIS 225
           + Y  L+ G   LS+   L          +A+ L  EM  +G +P    I CIS
Sbjct: 868 STYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACIS 921



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 3/211 (1%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M+++ +    ++   L+  +   G  S+   +  EML S +   V T  VL+   CK G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           +  A+D    + +  +  +   Y  +I G C+   + +A      M K+D   DT     
Sbjct: 61  LILALDL---LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L+ G+ +    K    + + +   G   D+  + +L+ G  + G +  A  L   M   G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +L D +   +L+    +RG  D+A  L +E+
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEI 208



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 3/183 (1%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M    I  T++ +  LI      GLV +  D +  M    + PNV  +  L+   CK   
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +  A +L   +   D+  DT  Y  +I G+ +H    +A    + M +     D      
Sbjct: 61  LILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           LV G  R G  +    +   ++  G   D I   +L+  + + G M  A++L   M   G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 251 LLS 253
           LLS
Sbjct: 178 LLS 180


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 124/240 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G C      ++  + +EM   G+  + V  T+L+    KAG    A+ L+ EM 
Sbjct: 265 YNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR 324

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +++  +TF  LIDG CK G + +A+     M    + P+V  Y ALI+G C    ++
Sbjct: 325 ERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMD 384

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR L  EM  + + PD   Y+ ++  Y K+     A  L  +M E GV  D   Y+SL+
Sbjct: 385 EARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLI 444

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L     L +A VLF  MI  G+ PDE+   SL+  H + GN++ A+ L +EM+  G+L
Sbjct: 445 RVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVL 504



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 126/252 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G     +   Y T++   C   + + ++ L+  M+E GL  N V   ++++   KAG 
Sbjct: 183 MRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGR 242

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + DEM+   +    V++  L+ G CK G   EA+  F  M   G+ P+V  +T+
Sbjct: 243 MEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTS 302

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  +CK   +ERA  L  EM +R +  +   +TALIDG+ K     +AL     M +  
Sbjct: 303 LIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCR 362

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +L+ G    G + EAR L  EM  +G+ PD +   ++L  + + G+   A 
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAF 422

Query: 241 ELQNEMMGRGLL 252
           +L  +M+  G+L
Sbjct: 423 QLNQQMLENGVL 434



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y  ++  LC     +++  +L +M+  G   N V   TL+ A+ +AGE
Sbjct: 148 MLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGE 207

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+D M +  ++  +VTF  +++G+CK+G + +A   F  M   GL P+   Y  
Sbjct: 208 VDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNT 267

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK  C   A ++F EM ++ ++PD   +T+LI    K  + + A+ L   M E G
Sbjct: 268 LVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG 327

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + ++   +T+L+ G  + G L +A +   EM    I P  +   +L+  +   G MDEA 
Sbjct: 328 LQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEAR 387

Query: 241 ELQNEMMGRGL 251
           EL  EM  +G+
Sbjct: 388 ELVREMEAKGV 398



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 119/234 (50%), Gaps = 1/234 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  L  ++    ++     M  +G+  N      L+ A    G   EALS+L +M 
Sbjct: 126 YNAVLLALS-DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMR 184

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  +   VT+  L+   C++G V  A      M + GL PN+  + ++++G+CK   +E
Sbjct: 185 GAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRME 244

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR +FDEM K  + PD  +Y  L+ GY K     EAL++   MT  G+  D+  +TSL+
Sbjct: 245 DARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLI 304

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             + + G+L+ A  L  EM  RG+  +EI   +L+    ++G +D+A+    EM
Sbjct: 305 HVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 15/272 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+  +  Y  +I G C+  + ++++ L+ EM+  G+  + V  +T++ AY K G+
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  +ML++ +    +T+  LI  LC+   + +A   F  M   GL P+   YT+
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTS 477

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA----------- 169
           LIDG CK+  +ERA +L DEM K  ++PD   Y+ LI+G  K    KEA           
Sbjct: 478 LIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEE 537

Query: 170 ---LNLK-NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
               N+K + +     + +L +  +L+ G    G + EA  ++  ++ R    D  +   
Sbjct: 538 PVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSV 597

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
           L+  H   GN+ +A+    +M+  G    S +
Sbjct: 598 LIHGHCREGNVMKALSFHKQMLQCGFAPNSTS 629



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  + ++I  +C     E +  L+ EM+E GL  N +  T L+D + K G 
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGF 347

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL  + EM   RI+ +VV +  LI+G C  G + EA +    M   G+ P+V  Y+ 
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++   CK      A  L  +M +  ++PD   Y++LI    + +   +A  L   M  +G
Sbjct: 408 ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   YTSL+ G  + G+++ A  L  EM+  G+LPD +
Sbjct: 468 LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVV 508



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 1/212 (0%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   + +    ++ A   A  PS A    D ML   +   V T+ +L+  LC  G  +EA
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +     M   G  PN   Y  L+   C+   ++RA  L D M +  + P+   + ++++G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K    ++A  + + M + G+  D  +Y +LV G  + G   EA  +F EM  +GI+PD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   SL+    + GN++ A+ L  EM  RGL
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGL 328



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 15/263 (5%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y ++I  LC E +  D+ +L   M   GL  + V  T+L+D + K G    ALSL 
Sbjct: 436 DAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLH 495

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL------- 121
           DEM+ + +   VVT+ VLI+GL KS   +EA     ++      P    Y AL       
Sbjct: 496 DEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNA 555

Query: 122 --------IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
                   + G C K  +  A  ++  +  R+   D + Y+ LI G+ +  +  +AL+  
Sbjct: 556 ELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFH 615

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
            +M + G   +  +  SL+ GL   G + EA  +  +++    L D     +L+  + + 
Sbjct: 616 KQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKE 675

Query: 234 GNMDEAIELQNEMMGRGLLSGSK 256
           GN+D  +++ + M   GLL   +
Sbjct: 676 GNVDAVLDVLHGMARDGLLPSPR 698



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 75/151 (49%)

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
           +F  M   G+ PNV  Y  L+  LC +   + A ++  +M      P+   Y  L+  + 
Sbjct: 144 FFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFC 203

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +      A  L + M E G+  +L  + S+V G+ + G +++AR +F EM+  G+ PD +
Sbjct: 204 RAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGV 263

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              +L+  + + G   EA+ +  EM  +G++
Sbjct: 264 SYNTLVGGYCKVGCSHEALSVFAEMTRKGIM 294


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 125/242 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +NIK D   Y  II GLC     +++  L +EM+  G+T N +    L+  +  AG 
Sbjct: 352 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   LL +M+  +I   VVTF VLID   K G +REA +    M   G+ P+   YT+
Sbjct: 412 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 471

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+N +++A  + D M  +   P+   +  LI+GY K     + L L  +M+  G
Sbjct: 472 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 531

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y +L+ G    G L  A+ LF EM+ R + P+ +    LL    + G  ++A+
Sbjct: 532 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 591

Query: 241 EL 242
           E+
Sbjct: 592 EI 593



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 2/250 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K DL    T++ GLC+  K  ++ LL+ +M E G   N V    +++   K+G+ + A+ 
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 347

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M +  I++  V + ++IDGLCK G +  A + F  M   G+  N+  Y  LI G C
Sbjct: 348 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 407

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    L  +M KR + P+   ++ LID ++K    +EA  L   M   G+  D  
Sbjct: 408 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 467

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNE 245
            YTSL+ G  +  HL +A  +   M+ +G  P+ I   ++L   Y + N +D+ +EL  +
Sbjct: 468 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN-IRTFNILINGYCKANRIDDGLELFRK 526

Query: 246 MMGRGLLSGS 255
           M  RG+++ +
Sbjct: 527 MSLRGVVADT 536



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 128/238 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GLC+E +  ++  L+  M E G   + +   TL++    +G+ +EA+ L+D+M+
Sbjct: 259 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 318

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +   VT+  +++ +CKSG    A++   +M +  +  +   Y+ +IDGLCK   ++
Sbjct: 319 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 378

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NLF+EM  + +  +   Y  LI G+     + +   L   M +  ++ ++  ++ L+
Sbjct: 379 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 438

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               + G L+EA  L  EMI RGI PD I   SL+    +  ++D+A ++ + M+ +G
Sbjct: 439 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 496



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 106/212 (50%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   NT+  +TL++     G  SEAL L+D M++   +  ++T   L++GLC SG   EA
Sbjct: 251 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 310

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    +M ++G  PN   Y  +++ +CK      A  L  +M +R++  D   Y+ +IDG
Sbjct: 311 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 370

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             KH S   A NL N M   G+  ++  Y  L+ G    G   +   L  +MI R I P+
Sbjct: 371 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 430

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +    L+    + G + EA EL  EM+ RG+
Sbjct: 431 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 462



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 100/211 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  ++  Y  +I G C   +++D   LL +M +  +  N V  + L+D++ K G+
Sbjct: 387 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 446

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM+   I    +T+  LIDG CK   + +A      M   G  PN+  +  
Sbjct: 447 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 506

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK N I+    LF +M  R ++ DT  Y  LI G+ +      A  L   M    
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           V  ++  Y  L+ GL   G  ++A  +F ++
Sbjct: 567 VPPNIVTYKILLDGLCDNGESEKALEIFEKI 597



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 110/246 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I G C E+  + +  ++  M   G   N      L++ Y KA  
Sbjct: 457 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 516

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L L  +M    +    VT+  LI G C+ G +  A + F  M    + PN+  Y  
Sbjct: 517 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 576

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC     E+A  +F+++ K  M  D   Y  +I G        +A +L   +   G
Sbjct: 577 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 636

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V   +  Y  ++ GL + G L EA +LF +M   G  PD      L++ H   G+  +++
Sbjct: 637 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 696

Query: 241 ELQNEM 246
           +L  E+
Sbjct: 697 KLIEEL 702



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 108/218 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  +  +I     E K  +++ L  EM   G+  +T+  T+L+D + K   
Sbjct: 422 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 481

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  ++D M+    +  + TF +LI+G CK+  + + ++ F +M   G+  +   Y  
Sbjct: 482 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 541

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   +  A+ LF EM  R + P+   Y  L+DG   +   ++AL +  ++ +  
Sbjct: 542 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 601

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           ++LD+  Y  ++ G+     + +A  LF  +  +G+ P
Sbjct: 602 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 639



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 87/184 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + AD   Y T+I G C   K   +K L  EM    +  N V    L+D     GE
Sbjct: 527 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 586

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + +++  S++E+ +  + ++I G+C +  V +A D F  +P  G+ P V  Y  
Sbjct: 587 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 646

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCKK  +  A  LF +M +    PD   Y  LI  +L      +++ L   +   G
Sbjct: 647 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 706

Query: 181 VDLD 184
             +D
Sbjct: 707 FSVD 710



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 99/232 (42%)

Query: 22  IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV 81
           ++ K +D+  L  +M  +      +  + L  A  K  +    L+L  +M    I   + 
Sbjct: 163 VDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLY 222

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           T  ++I+  C+   +  A    G++   G  PN   ++ LI+GLC +  +  A  L D M
Sbjct: 223 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 282

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            +    PD      L++G        EA+ L ++M E G   +   Y  ++  + + G  
Sbjct: 283 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 342

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
             A  L  +M  R I  D +    ++    + G++D A  L NEM  +G+ +
Sbjct: 343 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 394


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 131/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++G ++K DL +Y TII  LC      D+  L SEM   G++ N    TTL+  +   G 
Sbjct: 192 LEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGN 251

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SLL+EM    I   V TF +LID L K G + EA+  F  M    + PN+  YT+
Sbjct: 252 LKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTS 311

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK + +ERA  L  +M ++ + P+  +YT L+D   K    + A      +   G
Sbjct: 312 LIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKG 371

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             L++  Y  ++ GL + G   +   L  +M G+G +P+ I   +++    E+   D+A 
Sbjct: 372 YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAE 431

Query: 241 ELQNEMMGRGLL 252
           +   EM+ RGLL
Sbjct: 432 KFLREMIARGLL 443



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 118/246 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  DL     +I   C  +    +  + + + + G   N +   TL+      GE   AL
Sbjct: 92  ITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRAL 151

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              D+++    ++  V++  LI+GLCK+G  +       ++    + P++ +YT +I  L
Sbjct: 152 HFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCL 211

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +  A +L+ EM  + + P+   YT LI G+    + KEA +L N M    ++ D+
Sbjct: 212 CKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDV 271

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +  L+  L++ G + EA  LF EM  + + P+ +   SL+    +  +++ AI L  +
Sbjct: 272 YTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKK 331

Query: 246 MMGRGL 251
           M  +G+
Sbjct: 332 MKEQGI 337



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 109/241 (45%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           L+  I+  L    ++     L  + + NG+T +    + L++ +      + A S+   +
Sbjct: 63  LFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANI 122

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L        +T   LI GLC  G ++ A+ +  ++   G   +   Y  LI+GLCK    
Sbjct: 123 LKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGET 182

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +    L  ++    + PD   YT +I    K++   +A +L + M   G+  ++  YT+L
Sbjct: 183 KAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTL 242

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G    G+L+EA  L +EM  + I PD      L+    + G +DEA+ L  EM  + +
Sbjct: 243 IHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNM 302

Query: 252 L 252
            
Sbjct: 303 F 303



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 88/202 (43%)

Query: 45  TVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG 104
           T +   ++ +  K       +SL  +   + I   + T  +LI+  C    +  A   F 
Sbjct: 61  TFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFA 120

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            +   G HPN      LI GLC    I+RA +  D++  +    D  +Y  LI+G  K  
Sbjct: 121 NILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAG 180

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             K    L  ++    V  DL  YT+++  L +   L +A  L+ EMI +GI P+     
Sbjct: 181 ETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYT 240

Query: 225 SLLKKHYERGNMDEAIELQNEM 246
           +L+      GN+ EA  L NEM
Sbjct: 241 TLIHGFCIMGNLKEAFSLLNEM 262



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 85/189 (44%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A++  + ML  R       F  ++  L K+      I  F +    G+ P++   + LI
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C    I  A ++F  + KR   P+      LI G       K AL+  +++   G  
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD  +Y +L+ GL + G  +    L  ++ G  + PD ++  +++    +   + +A +L
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223

Query: 243 QNEMMGRGL 251
            +EM+ +G+
Sbjct: 224 YSEMIVKGI 232


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 128/243 (52%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  Y TII  LC +    ++   LSEM + G+  + V   T++  +   G+ +EA  
Sbjct: 233 KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATR 292

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM+   +    VTF +L+DGLCK G+V EA      M + G  PN   Y AL+DG C
Sbjct: 293 LFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYC 352

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
             N ++ A  +   M  +   P+ ++Y  LI+GY K +   EA  L + M+E  +  D  
Sbjct: 353 LHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTV 412

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y++L+ GL + G  +EA  LF EM   G+LPD +    LL    + G++DEA++L  EM
Sbjct: 413 TYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEM 472

Query: 247 MGR 249
             R
Sbjct: 473 HER 475



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y TI+ G C   +  ++  L  EM    +  +TV    L+D   K G 
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGM 321

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  + + M +   E    T+  L+DG C    + EAI   G M   G  PN++ Y  
Sbjct: 322 VSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNI 381

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +  A+ L  EM ++++ PDT  Y+ L+ G  +    +EALNL   M   G
Sbjct: 382 LINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSG 441

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL AY+ L+ G  + GHL EA  L  EM  R I P+ IL   L++  +  G ++ A 
Sbjct: 442 LLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAK 501

Query: 241 ELQNEMMGRGL 251
           EL +++   G+
Sbjct: 502 ELFSKLSADGI 512



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 122/255 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+N+  D   +  ++ GLC E    +++ +   M E G   N      LMD Y    +
Sbjct: 297 MVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQ 356

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +L  M+       + ++ +LI+G CKS  + EA      M +  L P+   Y+ 
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+      A NLF EM    ++PD  AY+ L+DG+ KH    EAL L   M E  
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR 476

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  YT L+ G+   G L+ A+ LF ++   GI PD      ++K   + G  DEA 
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536

Query: 241 ELQNEMMGRGLLSGS 255
           E   +M   G L  S
Sbjct: 537 EFFRKMEDDGFLPDS 551



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 124/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D   + T+I GLC E K +++  L +EM  +G   N +   T+++   K G    A+
Sbjct: 162 IQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAV 221

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M  +R +  VVT+  +ID LCK  LV EA+++   M D G+ P+V  Y  ++ G 
Sbjct: 222 RVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGF 281

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    +  A  LF EM  R+++PDT  +  L+DG  K     EA  +   MTE G + + 
Sbjct: 282 CSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNA 341

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ G      + EA  +   MIG+G  P+      L+  + +   M+EA  L +E
Sbjct: 342 YTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSE 401

Query: 246 MMGRGL 251
           M  + L
Sbjct: 402 MSEKNL 407



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 107/219 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK    +L  Y  +I G C   +  ++K LLSEM E  LT +TV  +TLM    + G 
Sbjct: 367 MIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGR 426

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EAL+L  EM  S +   ++ + +L+DG CK G + EA+     M +  + PN+ +YT 
Sbjct: 427 PREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTI 486

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G+     +E A+ LF ++    + PD   Y  +I G LK     EA     +M + G
Sbjct: 487 LIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDG 546

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              D  +Y  ++ G  +      A  L  EM+G+    D
Sbjct: 547 FLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSAD 585



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 123/249 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + +   Y  ++ G C+ ++ +++  +L  M   G   N      L++ Y K+  
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  LL EM +  +    VT+  L+ GLC+ G  REA++ F  M   GL P++  Y+ 
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI 451

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG CK   ++ A  L  EM +R + P+   YT LI G       + A  L ++++  G
Sbjct: 452 LLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  ++ GL + G   EA   F +M   G LPD      +++   +  +   AI
Sbjct: 512 IRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAI 571

Query: 241 ELQNEMMGR 249
           +L +EM+G+
Sbjct: 572 QLIDEMVGK 580



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 116/246 (47%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N +  +  +G  +  +  + ++  +  L ++M   G+T N      L++   +      A
Sbjct: 91  NPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFA 150

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +S++ +M    I+   +TF  LI+GLC  G ++EA+  F  M   G  PNV  Y  +I+G
Sbjct: 151 VSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVING 210

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK      A  +F +M +    P+   Y  +ID   K     EA+   + M + G+  D
Sbjct: 211 LCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPD 270

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y +++ G    G L EA  LF EM+GR ++PD +    L+    + G + EA  +  
Sbjct: 271 VVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSE 330

Query: 245 EMMGRG 250
            M  +G
Sbjct: 331 TMTEKG 336



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 112/236 (47%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            +I  LC  S  + +  ++ +M + G+  + +   TL++     G+  EA+ L +EM+ S
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
             E  V+++  +I+GLCK+G    A+  F +M      PNV  Y  +ID LCK   +  A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
                EM  R + PD   Y  ++ G+       EA  L   M    V  D   +  LV G
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDG 315

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L + G + EAR +   M  +G  P+     +L+  +     MDEAI++   M+G+G
Sbjct: 316 LCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKG 371



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 98/192 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  D   Y T++ GLC   +  ++  L  EM  +GL  + +  + L+D + K G 
Sbjct: 402 MSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGH 461

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL EM + RI+  ++ + +LI G+  +G +  A + F ++   G+ P++  Y  
Sbjct: 462 LDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNV 521

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GL K+   + A   F +M     +PD+ +Y  +I G+L+++    A+ L + M    
Sbjct: 522 MIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKR 581

Query: 181 VDLDLNAYTSLV 192
              D + +  L+
Sbjct: 582 FSADSSTFQMLL 593



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 99/196 (50%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           K  + S A+SL ++M    +   V +  VLI+ LC+   V  A+   G+M   G+ P+  
Sbjct: 108 KKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAI 167

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +  LI+GLC +  I+ A  LF+EM      P+  +Y  +I+G  K+ +   A+ +  +M
Sbjct: 168 TFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKM 227

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            +     ++  Y +++  L +   + EA     EM+ RGI PD +   ++L      G +
Sbjct: 228 EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQL 287

Query: 237 DEAIELQNEMMGRGLL 252
           +EA  L  EM+GR ++
Sbjct: 288 NEATRLFKEMVGRNVM 303



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 71/151 (47%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + +A+  F RM      P+V  +   +  + KK     A +L ++M    +  +  +   
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI+   +      A+++  +M ++G+  D   + +L+ GL   G ++EA  LF+EM+  G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             P+ I   +++    + GN   A+ +  +M
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKM 227



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 54/120 (45%)

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           I+ A   F  M + +  P    +   +    K + +  A++L N+M   GV  ++ +   
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+  L R  H+  A  +  +M   GI PD I   +L+      G + EA+ L NEM+  G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 35/279 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T + GLC +  F D+ +L +EM E G+  +    TTL+  Y K G   +AL+L 
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCK-----------------------------------S 93
           + M+ + ++   VT+  LIDG CK                                   S
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           GL+ EA++   +M + G+ PN+     LI G C+   + +A     +M    +IPD+ +Y
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             LIDGYLK  + ++A  L N M + G+  ++  Y  ++ G    G +QEA  +  +MI 
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GI PD     SL+  H  + NM EA    +EM+ RGL+
Sbjct: 706 IGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 133/267 (49%), Gaps = 35/267 (13%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  LC + KFE+    LS+M+  G+ A+ V   TL++AY + G   EA  LL+      
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           +E  ++T+  ++ GLCK G    A D    M   GL PN A Y  L+  +C+++ I  A+
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 136 NLFDEMPKRD-----------------------------------MIPDTTAYTALIDGY 160
            +FDEM +R                                    ++PD   YT LIDG+
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            ++ +  +AL +++ M   G  +D+  Y + + GL +     +A +LF+EM+ RG++PD 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMM 247
               +L++ + + GNMD+A+ L   M+
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMV 529



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  D  +Y  +I G C      D+  +  EM   G   + V   T ++   K   
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L +EM++  +     TF  LI G CK G + +A++ F  M    L P+   Y  
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   + RA+ L+D+M ++D+IPD  +Y  +++G+       EALNL ++M E G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +L    +L+ G  R G + +A     +MI  GI+PD     +L+  + +  N+++A 
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 241 ELQNEMMGRGL 251
            L NEM  RGL
Sbjct: 663 ILINEMEKRGL 673



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 121/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++  +C      +++ +  EM   G+  + V  ++L+    + G   +AL    EM 
Sbjct: 365 YNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME 424

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S I    V + +LIDG C++G + +A+     M   G   +V  Y   ++GLCKK    
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM +R M+PD   +T LI GY K  +  +ALNL   M    +  D   Y +L+
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G +  A+ L+ +MI + I+PD I   ++L      G + EA+ L ++M+ +G+
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 117/220 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+K D   Y T+I G C   +   +K L  +M    +  + +   T+++ +  +G 
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL+L D+ML+  I   +VT   LI G C+SG + +A +Y  +M   G+ P+   Y  
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K+  +E+A  L +EM KR +  +   Y  +++G+      +EA  +  +M E+G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           ++ D   Y+SL+ G     +++EA     EM+ RG++PD+
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 112/219 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  E+   G+  N      +++A  K  +    +  L +M    +   +VT+  LI+  C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + GLV EA          G+ P +  Y A++ GLCK    +RA+++  EM +  + P+  
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  L+    + ++  EA  + + M+  GV  DL +++SL+  L+R GHL +A + F EM
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              GI+PD ++   L+      G + +A+++++EM+ RG
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 5/242 (2%)

Query: 16  IIWGLCIESKFEDSKL-----LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           +I+ L + +  +  KL         ++  G++ +   C  L+    + G    A  +  E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           ++   IE+ V T  ++++ LCK       + +   M   G+  ++  Y  LI+  C++  
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +E A  L +    R M P    Y A++ G  K   +  A ++   M ++G+  +   Y +
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+  + R  ++ EA+ +F EM  RG+LPD +   SL+      G++ +A+    EM   G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 251 LL 252
           ++
Sbjct: 428 IV 429


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 131/246 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K ++  Y TII  LC +    ++    SEM + G+  +    ++++  +   G 
Sbjct: 71  MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA SL  +M++  +    VTF +LIDGLCK  ++ EA   F  M + GL P+V  Y A
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A+ LF+ M ++   P+  +Y  LI+G+ K     EA  L   M+   
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKS 250

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y++L+ G  + G  QEA+ L  EM   G+LP+ I    +L    + G++DEA 
Sbjct: 251 LTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAF 310

Query: 241 ELQNEM 246
           EL   M
Sbjct: 311 ELLKAM 316



 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 121/246 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y TII GLC       +  LL +M+E G   N V   T++D+  K    +EA+ 
Sbjct: 42  EPDVITYSTIINGLCKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMD 101

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
              EM+   I   V T+  ++ G C  G V EA   F +M +  + PN   +T LIDGLC
Sbjct: 102 FFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLC 161

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           KK  I  A  +F+ M ++ + PD   Y AL+DGY       EA  L N M   G   ++ 
Sbjct: 162 KKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVR 221

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +Y  L+ G  + G + EA+ L  EM  + + PD     +L++   + G   EA EL  EM
Sbjct: 222 SYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM 281

Query: 247 MGRGLL 252
              GLL
Sbjct: 282 CSYGLL 287



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 131/246 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++  L  + T++ GLC ++K  D+  L  EM + G   + +  +T+++   K G  + AL
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL +M +   +  VV +  +ID LCK  LV EA+D+F  M   G+ P+V  Y++++ G 
Sbjct: 66  QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    +  A +LF +M +R++IP+   +T LIDG  K     EA  +   MTE G++ D+
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +LV G      + EA+ LF+ M  +G  P+      L+  H + G +DEA  L  E
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAE 245

Query: 246 MMGRGL 251
           M  + L
Sbjct: 246 MSHKSL 251



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 107/219 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  Y  +I G C   + +++K LL+EM    LT +    +TLM  + + G 
Sbjct: 211 MDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGR 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA  LL EM    +   ++T+ +++DGLCK G + EA +    M +  + PN+ +YT 
Sbjct: 271 PQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTI 330

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G+C    +E AR LF  +  + + P    YT +I G LK     EA  L   M   G
Sbjct: 331 LIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNG 390

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              +   Y  ++ G  R G    A  L  EM+G+G   D
Sbjct: 391 CLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSAD 429



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 122/255 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D+  Y  ++ G C  S+ ++++ L + M   G   N      L++ + K+G 
Sbjct: 176 MTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGR 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM    +   + T+  L+ G C+ G  +EA +    M  +GL PN+  Y+ 
Sbjct: 236 IDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSI 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DGLCK   ++ A  L   M +  + P+   YT LI+G       + A  L + +   G
Sbjct: 296 VLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKG 355

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  YT ++ GL + G   EA  LF EM   G LP+      +++     G+   A+
Sbjct: 356 IQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAV 415

Query: 241 ELQNEMMGRGLLSGS 255
            L  EM+G+G  + S
Sbjct: 416 RLIEEMVGKGFSADS 430



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 118/255 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  +   +  +I GLC +    ++ L+   M E GL  +      L+D Y    +
Sbjct: 141 MVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQ 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L + M        V ++ +LI+G CKSG + EA      M    L P++  Y+ 
Sbjct: 201 MDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYST 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+    + A+ L  EM    ++P+   Y+ ++DG  KH    EA  L   M E  
Sbjct: 261 LMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESK 320

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  YT L+ G+   G L+ AR LF  +  +GI P  +    ++    + G  +EA 
Sbjct: 321 IEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEAC 380

Query: 241 ELQNEMMGRGLLSGS 255
           EL  EM   G L  S
Sbjct: 381 ELFREMAVNGCLPNS 395



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 104/211 (49%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           GL    V   TL+       +  +A+ L DEM+    E  V+T+  +I+GLCK G    A
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    +M + G  PNV  Y  +ID LCK   +  A + F EM K  + PD   Y++++ G
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +       EA +L  +M E  V  +   +T L+ GL +   + EA ++F  M  +G+ PD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRG 250
                +L+  +  R  MDEA +L N M  +G
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKG 215



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 93/191 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K++  D+  Y T++ G C   + ++++ LL EM   GL  N +  + ++D   K G 
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M +S+IE  +  + +LI+G+C  G +  A + F  +   G+ P V  YT 
Sbjct: 306 LDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTV 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GL K      A  LF EM     +P++  Y  +I G+L++     A+ L   M   G
Sbjct: 366 MISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKG 425

Query: 181 VDLDLNAYTSL 191
              D + +  L
Sbjct: 426 FSADSSTFRML 436



 Score = 80.9 bits (198), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 72/147 (48%)

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M   GL P +  +  L+ GLC K  I  A  LFDEM K    PD   Y+ +I+G  K  +
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
              AL L  +M E G   ++ AY +++  L +   + EA   F EM+  GI PD     S
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLL 252
           +L      G ++EA  L  +M+ R ++
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVI 147



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 53/123 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ ++ +Y  +I G+C   K E ++ L S +   G+    V  T ++    K G 
Sbjct: 316 MQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGL 375

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L  EM  +       T+ V+I G  ++G    A+     M   G   + + +  
Sbjct: 376 SNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRM 435

Query: 121 LID 123
           L D
Sbjct: 436 LSD 438


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 130/242 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N + D+ +Y +II  LC + +  ++  L S+M   G++ +    T+L+ A     E
Sbjct: 187 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 246

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL++M++S+I   VV F  ++D LCK G V EA +    M   G+ P+V  YT 
Sbjct: 247 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 306

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A  +FD M ++   PD  +YT LI+GY K     +A+ L   M    
Sbjct: 307 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 366

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +L+ GL   G LQ+A  LFHEM+ RG +PD +    LL    +  +++EA+
Sbjct: 367 WIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAM 426

Query: 241 EL 242
            L
Sbjct: 427 AL 428



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 132/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ I  D+  Y +++  LC   +++    LL++M  + +  + VI +T++DA  K G+
Sbjct: 222 MVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 281

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  ++D M+   +E  VVT+  L+DG C    + EA+  F  M   G  P+V  YT 
Sbjct: 282 VTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT 341

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK + I++A  LF+EM +++ IPDT  Y  L+ G       ++A+ L + M   G
Sbjct: 342 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARG 401

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y+ L+  L +  HL+EA  L   +    + PD  +   ++      G ++ A 
Sbjct: 402 QMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAAR 461

Query: 241 ELQNEMMGRGL 251
           +L + +  +GL
Sbjct: 462 DLFSNLSSKGL 472



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GLC+E K  ++  L  +M + G   N V   TL++   K G  S A+ 
Sbjct: 123 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 182

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL----- 121
           LL  M     +  VV +  +ID LCK   V EA + F +M   G+ P++  YT+L     
Sbjct: 183 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 242

Query: 122 ------------------------------IDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                                         +D LCK+  +  A  + D M +R + PD  
Sbjct: 243 NLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV 302

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT L+DG+       EA+ + + M   G   D+ +YT+L+ G  +   + +A  LF EM
Sbjct: 303 TYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEM 362

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +  +PD     +L+      G + +AI L +EM+ RG
Sbjct: 363 CRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARG 401



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 114/220 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+++ + G   +    TTL+      G+  EAL L D+M+D   +  VVT+  LI+GLC
Sbjct: 113 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 172

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G    AI     M      P+V +YT++ID LCK   +  A NLF +M  + + PD  
Sbjct: 173 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 232

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT+L+        +K    L N+M    +  D+  ++++V  L + G + EA  +   M
Sbjct: 233 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 292

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I RG+ PD +   +L+  H  +  MDEA+++ + M+ +G 
Sbjct: 293 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 107/220 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++M   G+  N      L++++        A S+L ++L    +    TF  LI GLC
Sbjct: 78  LSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC 137

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + EA+  F +M D G  PNV  Y  LI+GLCK      A  L   M + +  PD  
Sbjct: 138 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVV 197

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT++ID   K     EA NL ++M   G+  D+  YTSLV  L      +    L ++M
Sbjct: 198 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 257

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   ILPD ++  +++    + G + EA E+ + M+ RG+
Sbjct: 258 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 297



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 121/248 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+ ++ T++  LC E K  ++  ++  M + G+  + V  TTLMD +    E
Sbjct: 257 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 316

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + D M+       V+++  LI+G CK   + +A+  F  M      P+   Y  
Sbjct: 317 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 376

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    ++ A  LF EM  R  +PD   Y+ L+D   K+   +EA+ L   +    
Sbjct: 377 LMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASN 436

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  Y  ++ G+ R G L+ AR LF  +  +G+ P       ++    +RG ++EA 
Sbjct: 437 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 496

Query: 241 ELQNEMMG 248
           +L  EM G
Sbjct: 497 KLFMEMDG 504



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y T++ G C++S+ +++  +   M   G   + +  TTL++ Y K  +
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 351

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EM          T+  L+ GLC  G +++AI  F  M   G  P++  Y+ 
Sbjct: 352 IDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 411

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK   +E A  L   +   ++ PD   Y  +IDG  +    + A +L + ++  G
Sbjct: 412 LLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 471

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  ++ GL + G L EA  LF EM G    PD     ++ +   +      AI
Sbjct: 472 LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAI 531

Query: 241 ELQNEMMGRGL 251
           +L  EM+ RG 
Sbjct: 532 QLLEEMLARGF 542



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 94/191 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y T++ GLC   + +D+  L  EM   G   + V  + L+D+  K     EA++LL
Sbjct: 370 DTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALL 429

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +  S +   +  + ++IDG+C++G +  A D F  +   GLHP+V  Y  +I GLCK+
Sbjct: 430 KAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKR 489

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  LF EM   D  PD   Y  +  G+L++     A+ L   M   G   D++  
Sbjct: 490 GLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTT 549

Query: 189 TSLVWGLSRCG 199
           T LV  LS  G
Sbjct: 550 TLLVEMLSDDG 560



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 95/219 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  Y T+I G C   K + +  L  EM       +T    TLM      G 
Sbjct: 327 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGR 386

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L  EM+       +VT+ +L+D LCK+  + EA+     +    L+P++ VY  
Sbjct: 387 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNI 446

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG+C+   +E AR+LF  +  + + P    Y  +I G  K     EA  L   M    
Sbjct: 447 IIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 506

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              D   Y ++  G  +      A  L  EM+ RG   D
Sbjct: 507 CSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 545



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+ +  K    S  LSL  +M    +   V T  +LI+  C    V  A     ++   G
Sbjct: 62  LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 121

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+   +T LI GLC +  I  A +LFD+M      P+   Y  LI+G  K  +   A+
Sbjct: 122 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 181

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   M +     D+  YTS++  L +   + EA  LF +M+G+GI PD     SL+   
Sbjct: 182 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 241

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
                      L N+M+   +L
Sbjct: 242 CNLCEWKHVTTLLNQMVNSKIL 263



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 88/189 (46%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +ALS  + +L      ++V F  L+  + K       +    +M  FG+ PNV     LI
Sbjct: 39  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 98

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C  N +  A ++  ++ K    PD T +T LI G        EAL+L ++M + G  
Sbjct: 99  NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 158

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL + G+   A  L   M      PD ++  S++    +   + EA  L
Sbjct: 159 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 218

Query: 243 QNEMMGRGL 251
            ++M+G+G+
Sbjct: 219 FSQMVGQGI 227


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  140 bits (352), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N + D+ +Y +II  LC + +  ++  L S+M   G++ +    T+L+ A     E
Sbjct: 196 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 255

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL++M++S+I   VV F  ++D LCK G V EA +    M   G+ P+V  YT 
Sbjct: 256 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 315

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A  +FD M ++   PD  +YT LI+GY K     +A+ L   M    
Sbjct: 316 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 375

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +L++GL   G LQ+A  LFHEM+ RG +PD +    LL    +  +++EA+
Sbjct: 376 WIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAM 435

Query: 241 EL 242
            L
Sbjct: 436 AL 437



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 132/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ I  D+  Y +++  LC   +++    LL++M  + +  + VI +T++DA  K G+
Sbjct: 231 MVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGK 290

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  ++D M+   +E  VVT+  L+DG C    + EA+  F  M   G  P+V  YT 
Sbjct: 291 VTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTT 350

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK + I++A  LF+EM +++ IPDT  Y  L+ G       ++A+ L + M   G
Sbjct: 351 LINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARG 410

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y+ L+  L +  HL+EA  L   +    + PD  +   ++      G ++ A 
Sbjct: 411 QMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAAR 470

Query: 241 ELQNEMMGRGL 251
           +L + +  +GL
Sbjct: 471 DLFSNLSSKGL 481



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GLC+E K  ++  L  +M + G   N V   TL++   K G  S A+ 
Sbjct: 132 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 191

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL----- 121
           LL  M     +  VV +  +ID LCK   V EA + F +M   G+ P++  YT+L     
Sbjct: 192 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 251

Query: 122 ------------------------------IDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                                         +D LCK+  +  A  + D M +R + PD  
Sbjct: 252 NLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV 311

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT L+DG+       EA+ + + M   G   D+ +YT+L+ G  +   + +A  LF EM
Sbjct: 312 TYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEM 371

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +  +PD     +L+      G + +AI L +EM+ RG
Sbjct: 372 CRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARG 410



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 114/220 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+++ + G   +    TTL+      G+  EAL L D+M+D   +  VVT+  LI+GLC
Sbjct: 122 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 181

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G    AI     M      P+V +YT++ID LCK   +  A NLF +M  + + PD  
Sbjct: 182 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 241

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT+L+        +K    L N+M    +  D+  ++++V  L + G + EA  +   M
Sbjct: 242 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 301

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I RG+ PD +   +L+  H  +  MDEA+++ + M+ +G 
Sbjct: 302 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 107/220 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++M   G+  N      L++++        A S+L ++L    +    TF  LI GLC
Sbjct: 87  LSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC 146

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + EA+  F +M D G  PNV  Y  LI+GLCK      A  L   M + +  PD  
Sbjct: 147 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVV 206

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT++ID   K     EA NL ++M   G+  D+  YTSLV  L      +    L ++M
Sbjct: 207 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 266

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   ILPD ++  +++    + G + EA E+ + M+ RG+
Sbjct: 267 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 306



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 121/248 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+ ++ T++  LC E K  ++  ++  M + G+  + V  TTLMD +    E
Sbjct: 266 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 325

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + D M+       V+++  LI+G CK   + +A+  F  M      P+   Y  
Sbjct: 326 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 385

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    ++ A  LF EM  R  +PD   Y+ L+D   K+   +EA+ L   +    
Sbjct: 386 LMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASN 445

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  Y  ++ G+ R G L+ AR LF  +  +G+ P       ++    +RG ++EA 
Sbjct: 446 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 505

Query: 241 ELQNEMMG 248
           +L  EM G
Sbjct: 506 KLFMEMDG 513



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 123/255 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y T++ G C++S+ +++  +   M   G   + +  TTL++ Y K  +
Sbjct: 301 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHK 360

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EM          T+  L+ GLC  G +++AI  F  M   G  P++  Y+ 
Sbjct: 361 IDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSI 420

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK   +E A  L   +   ++ PD   Y  +IDG  +    + A +L + ++  G
Sbjct: 421 LLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKG 480

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  ++ GL + G L EA  LF EM G    PD     ++ +   +      AI
Sbjct: 481 LHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAI 540

Query: 241 ELQNEMMGRGLLSGS 255
           +L  EM+ RG  + S
Sbjct: 541 QLLEEMLARGFSADS 555



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 1/234 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  Y T+I G C   K + +  L  EM       +T    TLM      G 
Sbjct: 336 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGR 395

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L  EM+       +VT+ +L+D LCK+  + EA+     +    L+P++ VY  
Sbjct: 396 LQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNI 455

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG+C+   +E AR+LF  +  + + P    Y  +I G  K     EA  L   M    
Sbjct: 456 IIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 515

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE-ILCISLLKKHYER 233
              D   Y ++  G  +      A  L  EM+ RG   D   L +S+L +   R
Sbjct: 516 CSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSCFLMLSVLSEDDRR 569



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+ +  K    S  LSL  +M    +   V T  +LI+  C    V  A     ++   G
Sbjct: 71  LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 130

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+   +T LI GLC +  I  A +LFD+M      P+   Y  LI+G  K  +   A+
Sbjct: 131 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 190

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   M +     D+  YTS++  L +   + EA  LF +M+G+GI PD     SL+   
Sbjct: 191 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 250

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
                      L N+M+   +L
Sbjct: 251 CNLCEWKHVTTLLNQMVNSKIL 272



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 88/189 (46%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +ALS  + +L      ++V F  L+  + K       +    +M  FG+ PNV     LI
Sbjct: 48  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 107

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C  N +  A ++  ++ K    PD T +T LI G        EAL+L ++M + G  
Sbjct: 108 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 167

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL + G+   A  L   M      PD ++  S++    +   + EA  L
Sbjct: 168 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 227

Query: 243 QNEMMGRGL 251
            ++M+G+G+
Sbjct: 228 FSQMVGQGI 236


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 133/282 (47%), Gaps = 35/282 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +L  + +++ G+C   K ED++ +  EM   GL  + V   TL+  Y KAG   EAL
Sbjct: 216 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEAL 275

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S+  EM    I   VVTF  LI  +CK+G +  A+    +M + GL  N   +TALIDG 
Sbjct: 276 SVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGF 335

Query: 126 CKK--------------NC---------------------IERARNLFDEMPKRDMIPDT 150
           CKK               C                     ++ AR L  EM  + + PD 
Sbjct: 336 CKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV 395

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y+ +I  Y K+     A  L  +M E GV  D   Y+SL+  L     L +A VLF  
Sbjct: 396 VTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKN 455

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           MI  G+ PDE    SL+  H + GN++ A+ L ++M+  G+L
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVL 497



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 130/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y  +I  LC     +++  +L +M+  G   N V   TL+ A+F+AGE
Sbjct: 141 MLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGE 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+  MLD  ++  +VTF  +++G+CK+G + +A   F  M   GL P+   Y  
Sbjct: 201 VDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNT 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK  C   A ++F EM ++ ++PD   +T+LI    K  + + A+ L  +M E G
Sbjct: 261 LVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERG 320

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + ++   +T+L+ G  + G L +A +    M    I P  +   +L+  +   G MDEA 
Sbjct: 321 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEAR 380

Query: 241 ELQNEMMGRGL 251
           EL +EM  +GL
Sbjct: 381 ELLHEMEAKGL 391



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 127/252 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G     ++  Y T++       + + ++ L+  M + GL  N V   ++++   KAG+
Sbjct: 176 MRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGK 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + DEM+   +    V++  L+ G CK+G   EA+  F  M   G+ P+V  +T+
Sbjct: 236 MEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTS 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  +CK   +E A  L  +M +R +  +   +TALIDG+ K     +AL     M +  
Sbjct: 296 LIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCR 355

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +L+ G    G + EAR L HEM  +G+ PD +   +++  + +  +   A 
Sbjct: 356 IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAF 415

Query: 241 ELQNEMMGRGLL 252
           EL  +M+ +G+L
Sbjct: 416 ELNQQMLEKGVL 427



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 118/228 (51%), Gaps = 1/228 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  L  ++    ++     M  +G+  N      L+ A    G   EALS+L +M 
Sbjct: 119 YNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMR 177

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +     VVT+  L+    ++G V  A    G M D GL PN+  + ++++G+CK   +E
Sbjct: 178 GAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKME 237

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR +FDEM +  + PD  +Y  L+ GY K     EAL++   MT+ G+  D+  +TSL+
Sbjct: 238 DARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLI 297

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             + + G+L+ A  L  +M  RG+  +E+   +L+    ++G +D+A+
Sbjct: 298 HVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL 345



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 127/272 (46%), Gaps = 15/272 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   IK  +  Y  +I G C+  + ++++ LL EM+  GL  + V  +T++ AY K  +
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  +ML+  +    +T+  LI  LC+   + +A   F  M   GL P+   YT+
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL-------- 172
           LIDG CK+  +ERA +L D+M K  ++PD   Y+ LI+G  K     EA  L        
Sbjct: 471 LIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEE 530

Query: 173 -------KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
                   + +       +L +  +L+ G    G + EA  ++  M+ R    D  +   
Sbjct: 531 PIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSV 590

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
           L+  H   GN+ +A+    +M+ RG    S +
Sbjct: 591 LIHGHCRAGNVMKALSFHKQMLQRGFAPNSTS 622



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 112/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  + ++I  +C     E +  L+ +M+E GL  N V  T L+D + K G 
Sbjct: 281 MTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL  +  M   RI+ +VV +  LI+G C  G + EA +    M   GL P+V  Y+ 
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   CK      A  L  +M ++ ++PD   Y++LI    + +   +A  L   M ++G
Sbjct: 401 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG 460

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   YTSL+ G  + G+++ A  L  +M+  G+LPD +
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVV 501



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 15/268 (5%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  D   Y ++I  LC E +  D+ +L   M + GL  +    T+L+D + K G    
Sbjct: 424 KGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVER 483

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL-- 121
           ALSL D+M+ + +   VVT+ VLI+GL KS    EA     ++      P    Y AL  
Sbjct: 484 ALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMH 543

Query: 122 -------------IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
                        + G C K  +  A  ++  M  R+   D + Y+ LI G+ +  +  +
Sbjct: 544 CCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMK 603

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           AL+   +M + G   +  +  SL+ GL   G + EA  +  +++    L D     +L+ 
Sbjct: 604 ALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALID 663

Query: 229 KHYERGNMDEAIELQNEMMGRGLLSGSK 256
            +   GN+D  +++ + M   GLL   +
Sbjct: 664 LNLNEGNVDAVLDVLHGMAKDGLLPSPR 691



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 89/190 (46%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           + A    D ML   +   V T+ +LI  LC  G  +EA+     M   G  PNV  Y  L
Sbjct: 132 TSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTL 191

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +    +   ++ A  L   M    + P+   + ++++G  K    ++A  + + M   G+
Sbjct: 192 VAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGL 251

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D  +Y +LV G  + G   EA  +F EM  +GI+PD +   SL+    + GN++ A+ 
Sbjct: 252 APDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVT 311

Query: 242 LQNEMMGRGL 251
           L  +M  RGL
Sbjct: 312 LVRQMRERGL 321



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 1/174 (0%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           +V+ +  ++  L  + L   A  +F  M   G+ PNV  Y  LI  LC +   + A ++ 
Sbjct: 115 SVLAYNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSIL 173

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
            +M      P+   Y  L+  + +      A  L   M + G+  +L  + S+V G+ + 
Sbjct: 174 RDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKA 233

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G +++AR +F EM+  G+ PD +   +L+  + + G   EA+ +  EM  +G++
Sbjct: 234 GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 287



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 1/105 (0%)

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           +P   AY A++   L   S   A    + M   GV  ++  Y  L+  L   GH +EA  
Sbjct: 113 VPSVLAYNAVLLA-LSDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALS 171

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  +M G G  P+ +   +L+   +  G +D A  L   M+  GL
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGL 216


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 35/279 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T + GLC +  F D+ +L +EM E G+  +    TTL+  Y K G   +AL+L 
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCK-----------------------------------S 93
           + M+ + ++   VT+  LIDG CK                                   S
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           GL+ EA++   +M + G+ PN+     LI G C+   + +A     +M    +IPD+ +Y
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             LIDGYLK  + ++A  L N M + G+  ++  Y  ++ G    G +QEA  +  +MI 
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GI PD     SL+  H  + NM EA    +EM+ RGL+
Sbjct: 706 IGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLV 744



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 133/267 (49%), Gaps = 35/267 (13%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  LC + KFE+    LS+M+  G+ A+ V   TL++AY + G   EA  LL+      
Sbjct: 263 MVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRG 322

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           +E  ++T+  ++ GLCK G    A D    M   GL PN A Y  L+  +C+++ I  A+
Sbjct: 323 MEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQ 382

Query: 136 NLFDEMPKRD-----------------------------------MIPDTTAYTALIDGY 160
            +FDEM +R                                    ++PD   YT LIDG+
Sbjct: 383 EIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGF 442

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            ++ +  +AL +++ M   G  +D+  Y + + GL +     +A +LF+EM+ RG++PD 
Sbjct: 443 CRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDF 502

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMM 247
               +L++ + + GNMD+A+ L   M+
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMV 529



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  D  +Y  +I G C      D+  +  EM   G   + V   T ++   K   
Sbjct: 423 MERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L +EM++  +     TF  LI G CK G + +A++ F  M    L P+   Y  
Sbjct: 483 FADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNT 542

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   + RA+ L+D+M ++D+IPD  +Y  +++G+       EALNL ++M E G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +L    +L+ G  R G + +A     +MI  GI+PD     +L+  + +  N+++A 
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 241 ELQNEMMGRGL 251
            L NEM  RGL
Sbjct: 663 ILINEMEKRGL 673



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 121/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++  +C      +++ +  EM   G+  + V  ++L+    + G   +AL    EM 
Sbjct: 365 YNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME 424

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S I    V + +LIDG C++G + +A+     M   G   +V  Y   ++GLCKK    
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM +R M+PD   +T LI GY K  +  +ALNL   M    +  D   Y +L+
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G +  A+ L+ +MI + I+PD I   ++L      G + EA+ L ++M+ +G+
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGI 603



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 117/220 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+K D   Y T+I G C   +   +K L  +M    +  + +   T+++ +  +G 
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL+L D+ML+  I   +VT   LI G C+SG + +A +Y  +M   G+ P+   Y  
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K+  +E+A  L +EM KR +  +   Y  +++G+      +EA  +  +M E+G
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           ++ D   Y+SL+ G     +++EA     EM+ RG++PD+
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDD 747



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 112/219 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  E+   G+  N      +++A  K  +    +  L +M    +   +VT+  LI+  C
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + GLV EA          G+ P +  Y A++ GLCK    +RA+++  EM +  + P+  
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  L+    + ++  EA  + + M+  GV  DL +++SL+  L+R GHL +A + F EM
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              GI+PD ++   L+      G + +A+++++EM+ RG
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 5/242 (2%)

Query: 16  IIWGLCIESKFEDSKL-----LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           +I+ L + +  +  KL         ++  G++ +   C  L+    + G    A  +  E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           ++   IE+ V T  ++++ LCK       + +   M   G+  ++  Y  LI+  C++  
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +E A  L +    R M P    Y A++ G  K   +  A ++   M ++G+  +   Y +
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+  + R  ++ EA+ +F EM  RG+LPD +   SL+      G++ +A+    EM   G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 251 LL 252
           ++
Sbjct: 428 IV 429


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  139 bits (351), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 142/287 (49%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D+  +G+I++GLC   K  + KLLL EM + G+  N V  T L+DA FKAG+
Sbjct: 15  MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 74

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL  L  M+       V+   VLIDGL KSG ++EA   F  +    L PN   Y+A
Sbjct: 75  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 134

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK----HESFKE-------- 168
           LIDG CK   I  A +   EM ++D +P+   Y++LI+GY+K    H++FK         
Sbjct: 135 LIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 194

Query: 169 -----------------------ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                                  AL+L ++M + G+  ++    + V  + R G ++EA 
Sbjct: 195 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 254

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L  +M   G+ PD +   +L+    + G +  A+ L  EM  + ++
Sbjct: 255 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 301



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 1/251 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+  +   Y  +I G C       ++  L EM+E     N +  ++L++ Y K G   +A
Sbjct: 124 NLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDA 183

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             +L +M+       + T+ +L+DG  K+G    A+D + +M   GL  NV +  A ++ 
Sbjct: 184 FKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNN 243

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           + +   +E A  L  +M    + PD   YT L+DG+LK      ALNL   MT   V  D
Sbjct: 244 MKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFD 303

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  +  L+  L + G   +   ++  M   G+ PD     ++L  ++++GN   A+EL N
Sbjct: 304 IVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWN 362

Query: 245 EMMGRGLLSGS 255
           EM  R L+  +
Sbjct: 363 EMKSRKLIPNA 373



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 130/287 (45%), Gaps = 36/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  D+  +  +I  L    K  D++ + S M+E GL+ +     T+++  FK G 
Sbjct: 295 MTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGN 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP------- 113
            + AL L +EM   ++    +T  ++I+GLC++G +  AID    M   GL+P       
Sbjct: 354 WTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRI 413

Query: 114 --NVA--------------------------VYTALIDGLCKKNCIERARNLFDEMPKRD 145
             N++                          VY  LI  LCK     +A  +  +M +R 
Sbjct: 414 LLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERG 473

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +I DTT Y ALI GY      K A    + M    V  D+  Y  L+ GLS+ G + EA 
Sbjct: 474 IIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEAD 533

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L  E+  RG++P+     +L+  H +  N  E + +  EM+ +G +
Sbjct: 534 DLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFI 580



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 100/235 (42%), Gaps = 14/235 (5%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
            +K D  +Y  +I  LC       +  +L +M+E G+ A+T     L+  Y  +     A
Sbjct: 438 QLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRA 497

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
                 ML  R+   + T+ +L+ GL K+GL+ EA D    +   GL PN   Y  L+ G
Sbjct: 498 FMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCG 557

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK    +    ++ EM  +  IP   AY  LI  + K    K+A  L N M   GV   
Sbjct: 558 HCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPT 617

Query: 185 LNAYTSLVWGLS------------RCGHLQEARVLFHEMIGRGILPDEIL--CIS 225
              Y  L+ G              +  +  EA+ LF EM  RG +P E    CIS
Sbjct: 618 CTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACIS 672



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  +      +I GLC   + E++  +L EM   GL   +     L++   K+  
Sbjct: 364 MKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRR 423

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L   + +++ +++V    + +LI  LCK G+ R+A      M + G+  +   Y A
Sbjct: 424 ADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNA 483

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C  + ++RA   +  M    + PD   Y  L+ G  K     EA +L + + + G
Sbjct: 484 LIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRG 543

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +L+ G  +  + +E   ++ EM+ +G +P       L+    + G M +A 
Sbjct: 544 LVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAK 603

Query: 241 ELQNEMMGRGL 251
           EL NEM  +G+
Sbjct: 604 ELMNEMQTKGV 614


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +   +  Y  II GLC     + +  +L EM  NGL  N V+ TTLM A+ K G 
Sbjct: 416 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 475

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  +L+ M +  I   V  +  LI G CK+  + EA  Y   M +  L PN   Y A
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            IDG  K   +E A   F+EM    ++P+   YTALI+G+ K  +  EA ++   +    
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 595

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y+ L+ GLSR G + EA  +F E+  +G+LP+     SL+    ++GN+D+A 
Sbjct: 596 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 655

Query: 241 ELQNEMMGRGL 251
           +L  EM  +G+
Sbjct: 656 QLLEEMCIKGI 666



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  D+  Y  +I GL    K  ++  + SE++E GL  N     +L+    K G   +
Sbjct: 594 RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK 653

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+EM    I   +VT+ +LIDGLCK+G +  A + F  +   GL PN   Y A++D
Sbjct: 654 ASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVD 713

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK      A  L +EM  R + PD   Y  +++   K E F++AL+L   M E G   
Sbjct: 714 GYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS 773

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            + ++ +L+ G  + G LQEA  L  EMI +  +P+ +   SL+  + + G M EA  L 
Sbjct: 774 TV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLW 832

Query: 244 NEMMGRGLLSGSK 256
            EM  R ++  +K
Sbjct: 833 LEMQERNVMPTAK 845



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 129/248 (52%), Gaps = 1/248 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  D+  Y  +I GLC   + E +K L  +++  GLT N V    ++D Y K+  P+ 
Sbjct: 664 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTA 723

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+EML   +      + V+++  CK     +A+D F  M + G    V+ +  LI+
Sbjct: 724 AFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIE 782

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   ++ A +L +EM ++  IP+   YT+LID   K     EA  L   M E  V  
Sbjct: 783 GYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP 842

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
               YTSL+ G    G++ E   LF EM+ +GI PD++    ++  +   GN+ EA +L+
Sbjct: 843 TAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLK 902

Query: 244 NEMMGRGL 251
           +E++ +G+
Sbjct: 903 DEILVKGM 910



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 132/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  DL  Y  +I G C+E +  ++KL+L EM + GL    +    L+D + + G+
Sbjct: 276 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 335

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + DEM+   IE  ++ +  L++G+CK+G + +A++    M + G+ P+   Y+ 
Sbjct: 336 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 395

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+   + RA  L DEM KR + P    Y+ +I+G  +  + +    +   M   G
Sbjct: 396 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 455

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+L+   ++ G ++E+R++   M  +GILPD     SL+    +   M+EA 
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 515

Query: 241 ELQNEMMGRGL 251
               EM+ R L
Sbjct: 516 TYLMEMLERRL 526



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 135/248 (54%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+A+L ++ T++ G+C   K E +  ++ EM E G+  ++   + L++ + +    + A 
Sbjct: 351 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 410

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LLDEM   ++  TV+T+ V+I+GLC+ G ++        M   GL PN  VYT L+   
Sbjct: 411 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 470

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K+  +E +R + + M ++ ++PD   Y +LI G+ K +  +EA      M E  +  + 
Sbjct: 471 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 530

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
           + Y + + G S+ G ++ A   F+EM+  G+LP+  +  +L++ H + GN+ EA  +   
Sbjct: 531 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 590

Query: 246 MMGRGLLS 253
           ++ R +L 
Sbjct: 591 ILSRRVLQ 598



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 129/246 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +  +Y T++     E + E+S+++L  M+E G+  +     +L+  + KA    EA 
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 515

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           + L EML+ R+     T+   IDG  K+G +  A  YF  M   G+ PNV +YTALI+G 
Sbjct: 516 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 575

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  +  A ++F  +  R ++ D   Y+ LI G  ++    EA  + + + E G+  + 
Sbjct: 576 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 635

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL+ G  + G++ +A  L  EM  +GI PD +    L+    + G ++ A  L ++
Sbjct: 636 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 695

Query: 246 MMGRGL 251
           + GRGL
Sbjct: 696 IEGRGL 701



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  D+  Y ++I G C   + E+++  L EM E  L  N       +D Y KAGE
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 545

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A    +EML   +   V  +  LI+G CK G V EA   F  +    +  +V  Y+ 
Sbjct: 546 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 605

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL +   +  A  +F E+ ++ ++P+   Y +LI G  K  +  +A  L   M   G
Sbjct: 606 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 665

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  Y  L+ GL + G ++ A+ LF ++ GRG+ P+ +   +++  + +  N   A 
Sbjct: 666 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 725

Query: 241 ELQNEMMGRGL 251
           +L  EM+ RG+
Sbjct: 726 QLLEEMLLRGV 736



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 123/250 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++ +   YG  I G     + E +    +EM   G+  N  I T L++ + K G  +E
Sbjct: 524 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 583

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+   +L  R+   V T+ VLI GL ++G + EA   F  + + GL PN   Y +LI 
Sbjct: 584 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 643

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK+  +++A  L +EM  + + PD   Y  LIDG  K    + A NL + +   G+  
Sbjct: 644 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 703

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y ++V G  +  +   A  L  EM+ RG+ PD  +   +L    +    ++A++L 
Sbjct: 704 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 763

Query: 244 NEMMGRGLLS 253
            EM+ +G  S
Sbjct: 764 QEMLEKGFAS 773



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 127/252 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +L  Y  II GLC     +++  L   M + GL  +      L++ +     
Sbjct: 241 MGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKR 300

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L EM+D  ++   +T+  LIDG  + G + +A      M   G+  N+ ++  
Sbjct: 301 SREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNT 360

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G+CK   +E+A  +  EM ++ + PD+  Y+ LI+G+ + ++   A  L + M +  
Sbjct: 361 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 420

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y+ ++ GL RCG+LQ    +  EM+  G+ P+ ++  +L+  H + G ++E+ 
Sbjct: 421 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 480

Query: 241 ELQNEMMGRGLL 252
            +   M  +G+L
Sbjct: 481 MILERMREQGIL 492



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 123/252 (48%), Gaps = 1/252 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  D  +Y  I+   C E KFE +  L  EM E G  A+TV   TL++ Y K+G+  E
Sbjct: 734 RGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQE 792

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+EM++ +     VT+  LID  CK+G++ EA   +  M +  + P    YT+L+ 
Sbjct: 793 ANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLH 852

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G      +     LF+EM  + + PD   Y  +ID Y +  +  EA  LK+ +   G+ +
Sbjct: 853 GYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPM 912

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            + AY +L+  L +     E   L +E+   G       C  + +     GNMDEA E+ 
Sbjct: 913 SVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVL 972

Query: 244 NEMMGRGLLSGS 255
             M+  G +S +
Sbjct: 973 RSMVKFGWVSNT 984



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 110/203 (54%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           T ++ A+ K G   +A  +L EM +      +VT+ V+I GLC++ L+ EAI+    M D
Sbjct: 219 TNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVD 278

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            GL P++  Y  LI+G C +     A+ +  EM    + P+   Y ALIDG+++    ++
Sbjct: 279 KGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQ 338

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A  +K+ M   G++ +L  + +L+ G+ + G +++A  +  EM+ +G+ PD      L++
Sbjct: 339 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 398

Query: 229 KHYERGNMDEAIELQNEMMGRGL 251
            H    NM  A EL +EM  R L
Sbjct: 399 GHCRGQNMARAFELLDEMKKRKL 421



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 103/234 (44%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            + T+I G C   K +++  LL EM E     N V  T+L+D   KAG   EA  L  EM 
Sbjct: 777  FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ 836

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  +  T  T+  L+ G    G + E    F  M   G+ P+   Y  +ID  C++  + 
Sbjct: 837  ERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVM 896

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             A  L DE+  + M     AY ALI    K E F E L L N + E G  L L   + + 
Sbjct: 897  EACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIA 956

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             G    G++ EA  +   M+  G + +      L+  +    N +++  L  +M
Sbjct: 957  RGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 103/209 (49%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C +L+    K  +      + D M   ++   V T+  +I   CK G V++A      M 
Sbjct: 183 CNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMG 242

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           + G  PN+  Y  +I GLC+   ++ A  L   M  + ++PD   Y  LI+G+   +  +
Sbjct: 243 EKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSR 302

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           EA  +   M +VG+  +   Y +L+ G  R G +++A  +  EM+  GI  + I+  +LL
Sbjct: 303 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLL 362

Query: 228 KKHYERGNMDEAIELQNEMMGRGLLSGSK 256
               + G M++A+E+  EMM +G+   S+
Sbjct: 363 NGVCKAGKMEKALEIMQEMMEKGVEPDSQ 391



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 69/139 (49%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           V F +L+D   K G + EA++ F    +F   P++    +L+  L K N +E    +FD 
Sbjct: 146 VIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDG 205

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M    ++PD   YT +I  + K  + K+A  +   M E G   +L  Y  ++ GL R   
Sbjct: 206 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARL 265

Query: 201 LQEARVLFHEMIGRGILPD 219
           L EA  L   M+ +G++PD
Sbjct: 266 LDEAIELKRSMVDKGLVPD 284



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 74/177 (41%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+ +N+      Y +++ G        +   L  EM   G+  + +    ++DAY + G 
Sbjct: 835  MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGN 894

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA  L DE+L   + ++V  +  LI  LCK     E +     + + G    +   + 
Sbjct: 895  VMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSV 954

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
            +  G      ++ A  +   M K   + +TT+   L+DG     + +++ NL  +M 
Sbjct: 955  IARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 125/250 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y T+I+G C+  +   +  LL EM    +     I   L++A  K G 
Sbjct: 176 MDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGN 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +LL  M    I+  VVT+  L+DG C  G V+ A   F  M   G++PNV  Y  
Sbjct: 236 VKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNI 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK   ++ A NL  EM  ++M+PDT  Y +LIDG  K      ALNL N M   G
Sbjct: 296 MINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 355

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YTSL+  L +  +L +A  LF +M  RGI P      +L+    + G +  A 
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQ 415

Query: 241 ELQNEMMGRG 250
           EL   ++ +G
Sbjct: 416 ELFQHLLVKG 425



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 129/252 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KNI   + +Y  +I  LC E   +++K LL+ M + G+    V  +TLMD Y   GE   
Sbjct: 214 KNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQN 273

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +   M+   +   V ++ ++I+GLCK   V EA++    M    + P+   Y +LID
Sbjct: 274 AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLID 333

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   I  A NL +EM  R    D   YT+L+D   K+++  +A  L  +M E G+  
Sbjct: 334 GLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQP 393

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +  YT+L+ GL + G L+ A+ LF  ++ +G   D      ++    + G  DEA+ ++
Sbjct: 394 TMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIK 453

Query: 244 NEMMGRGLLSGS 255
           ++M   G +  +
Sbjct: 454 SKMEDNGCIPNA 465



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 131/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK  +  Y T++ G C+  + +++K +   M + G+  N      +++   K   
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++LL EML   +    VT+  LIDGLCKSG +  A++    M   G   +V  YT+
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK   +++A  LF +M +R + P    YTALIDG  K    K A  L   +   G
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKG 425

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +D+  YT ++ GL + G   EA  +  +M   G +P+ +    +++  +E+   D+A 
Sbjct: 426 CCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAE 485

Query: 241 ELQNEMMGRGLL 252
           +L +EM+ +GLL
Sbjct: 486 KLLHEMIAKGLL 497



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 129/279 (46%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D     T++ GLC++ + + S     ++   G   + V   TL++   K GE   A+ 
Sbjct: 77  QPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVK 136

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PD--------FG-- 110
           LL  + D      VV +  +IDGLCK  LV EA D +  M      PD        +G  
Sbjct: 137 LLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFC 196

Query: 111 -------------------LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                              ++P V +Y  LI+ LCK+  ++ A+NL   M K  + P   
Sbjct: 197 LLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVV 256

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ L+DGY      + A  + + M ++GV+ ++ +Y  ++ GL +C  + EA  L  EM
Sbjct: 257 TYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM 316

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + + ++PD +   SL+    + G +  A+ L NEM  RG
Sbjct: 317 LHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 355



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+A+      +I   C   +   S  +L ++ + G   +T+   TLM      GE
Sbjct: 36  MEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGE 95

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             ++L   D+++    ++  V++  L++GLCK G  R A+     + D    PNV +Y  
Sbjct: 96  VKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNT 155

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY-------------------- 160
           +IDGLCK   +  A +L+ EM  R + PD   YT LI G+                    
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215

Query: 161 ---------------LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                           K  + KEA NL   MT+ G+   +  Y++L+ G    G +Q A+
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAK 275

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +FH M+  G+ P+      ++    +   +DEA+ L  EM+ + ++
Sbjct: 276 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMV 322



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 31/236 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC   + +++  LL EM    +  +TV   +L+D   K+G  + AL+L++EM 
Sbjct: 293 YNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMH 352

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VVT+  L+D LCK+  + +A   F +M + G+ P +  YTALIDGLCK   ++
Sbjct: 353 HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLK 412

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ LF  +  +    D   YT +I G  K   F EAL +K++M + G   +   +  ++
Sbjct: 413 NAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIII 472

Query: 193 WGL------SRCGHL-------------------------QEARVLFHEMIGRGIL 217
             L       +   L                          +A  L HEMI +G+L
Sbjct: 473 RSLFEKDENDKAEKLLHEMIAKGLLVLDFKVADVFVQNENDKAEKLLHEMIAKGLL 528



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 110/242 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  I+  L    ++  +  L  +M+  G+ AN V    L++ +   G+ + + S+L ++L
Sbjct: 13  FNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKIL 72

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +   +T   L+ GLC  G V++++ +  ++   G   +   Y  L++GLCK     
Sbjct: 73  KLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETR 132

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   +  R   P+   Y  +IDG  K +   EA +L + M   G+  D   YT+L+
Sbjct: 133 CAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +G    G L  A  L  EMI + I P   +   L+    + GN+ EA  L   M   G+ 
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252

Query: 253 SG 254
            G
Sbjct: 253 PG 254



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 79/182 (43%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           ML  R    ++ F  ++  L K      AI    +M   G+  N      LI+  C    
Sbjct: 1   MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +  + ++  ++ K    PDT     L+ G       K++L+  +++   G  +D  +Y +
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ GL + G  + A  L   +  R   P+ ++  +++    +   ++EA +L +EM  RG
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 251 LL 252
           + 
Sbjct: 181 IF 182


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +   +  Y  II GLC     + +  +L EM  NGL  N V+ TTLM A+ K G 
Sbjct: 407 MKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR 466

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  +L+ M +  I   V  +  LI G CK+  + EA  Y   M +  L PN   Y A
Sbjct: 467 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 526

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            IDG  K   +E A   F+EM    ++P+   YTALI+G+ K  +  EA ++   +    
Sbjct: 527 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 586

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y+ L+ GLSR G + EA  +F E+  +G+LP+     SL+    ++GN+D+A 
Sbjct: 587 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 646

Query: 241 ELQNEMMGRGL 251
           +L  EM  +G+
Sbjct: 647 QLLEEMCIKGI 657



 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  D+  Y  +I GL    K  ++  + SE++E GL  N     +L+    K G   +
Sbjct: 585 RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDK 644

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+EM    I   +VT+ +LIDGLCK+G +  A + F  +   GL PN   Y A++D
Sbjct: 645 ASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVD 704

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK      A  L +EM  R + PD   Y  +++   K E F++AL+L   M E G   
Sbjct: 705 GYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS 764

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            + ++ +L+ G  + G LQEA  L  EMI +  +P+ +   SL+  + + G M EA  L 
Sbjct: 765 TV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLW 823

Query: 244 NEMMGRGLLSGSK 256
            EM  R ++  +K
Sbjct: 824 LEMQERNVMPTAK 836



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 129/248 (52%), Gaps = 1/248 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  D+  Y  +I GLC   + E +K L  +++  GLT N V    ++D Y K+  P+ 
Sbjct: 655 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTA 714

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+EML   +      + V+++  CK     +A+D F  M + G    V+ +  LI+
Sbjct: 715 AFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FNTLIE 773

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   ++ A +L +EM ++  IP+   YT+LID   K     EA  L   M E  V  
Sbjct: 774 GYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP 833

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
               YTSL+ G    G++ E   LF EM+ +GI PD++    ++  +   GN+ EA +L+
Sbjct: 834 TAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLK 893

Query: 244 NEMMGRGL 251
           +E++ +G+
Sbjct: 894 DEILVKGM 901



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 132/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  DL  Y  +I G C+E +  ++KL+L EM + GL    +    L+D + + G+
Sbjct: 267 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 326

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + DEM+   IE  ++ +  L++G+CK+G + +A++    M + G+ P+   Y+ 
Sbjct: 327 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 386

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+   + RA  L DEM KR + P    Y+ +I+G  +  + +    +   M   G
Sbjct: 387 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 446

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+L+   ++ G ++E+R++   M  +GILPD     SL+    +   M+EA 
Sbjct: 447 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 506

Query: 241 ELQNEMMGRGL 251
               EM+ R L
Sbjct: 507 TYLMEMLERRL 517



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 135/248 (54%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+A+L ++ T++ G+C   K E +  ++ EM E G+  ++   + L++ + +    + A 
Sbjct: 342 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 401

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LLDEM   ++  TV+T+ V+I+GLC+ G ++        M   GL PN  VYT L+   
Sbjct: 402 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 461

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K+  +E +R + + M ++ ++PD   Y +LI G+ K +  +EA      M E  +  + 
Sbjct: 462 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 521

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
           + Y + + G S+ G ++ A   F+EM+  G+LP+  +  +L++ H + GN+ EA  +   
Sbjct: 522 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 581

Query: 246 MMGRGLLS 253
           ++ R +L 
Sbjct: 582 ILSRRVLQ 589



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 129/246 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +  +Y T++     E + E+S+++L  M+E G+  +     +L+  + KA    EA 
Sbjct: 447 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 506

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           + L EML+ R+     T+   IDG  K+G +  A  YF  M   G+ PNV +YTALI+G 
Sbjct: 507 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGH 566

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  +  A ++F  +  R ++ D   Y+ LI G  ++    EA  + + + E G+  + 
Sbjct: 567 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 626

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL+ G  + G++ +A  L  EM  +GI PD +    L+    + G ++ A  L ++
Sbjct: 627 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 686

Query: 246 MMGRGL 251
           + GRGL
Sbjct: 687 IEGRGL 692



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  D+  Y ++I G C   + E+++  L EM E  L  N       +D Y KAGE
Sbjct: 477 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGE 536

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A    +EML   +   V  +  LI+G CK G V EA   F  +    +  +V  Y+ 
Sbjct: 537 MEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSV 596

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL +   +  A  +F E+ ++ ++P+   Y +LI G  K  +  +A  L   M   G
Sbjct: 597 LIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG 656

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  Y  L+ GL + G ++ A+ LF ++ GRG+ P+ +   +++  + +  N   A 
Sbjct: 657 INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAF 716

Query: 241 ELQNEMMGRGL 251
           +L  EM+ RG+
Sbjct: 717 QLLEEMLLRGV 727



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 123/250 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++ +   YG  I G     + E +    +EM   G+  N  I T L++ + K G  +E
Sbjct: 515 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 574

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+   +L  R+   V T+ VLI GL ++G + EA   F  + + GL PN   Y +LI 
Sbjct: 575 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 634

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK+  +++A  L +EM  + + PD   Y  LIDG  K    + A NL + +   G+  
Sbjct: 635 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 694

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y ++V G  +  +   A  L  EM+ RG+ PD  +   +L    +    ++A++L 
Sbjct: 695 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 754

Query: 244 NEMMGRGLLS 253
            EM+ +G  S
Sbjct: 755 QEMLEKGFAS 764



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 128/269 (47%), Gaps = 17/269 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKEN-----------------GLTA 43
           M    +  D+  Y  +I   C     +D+K +L EM E                  GL  
Sbjct: 215 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVP 274

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +      L++ +       EA  +L EM+D  ++   +T+  LIDG  + G + +A    
Sbjct: 275 DLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIK 334

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
             M   G+  N+ ++  L++G+CK   +E+A  +  EM ++ + PD+  Y+ LI+G+ + 
Sbjct: 335 DEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRG 394

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
           ++   A  L + M +  +   +  Y+ ++ GL RCG+LQ    +  EM+  G+ P+ ++ 
Sbjct: 395 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 454

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +L+  H + G ++E+  +   M  +G+L
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGIL 483



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 7/249 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  D  +Y  I+   C E KFE +  L  EM E G  A+TV   TL++ Y K+G+  E
Sbjct: 725 RGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQE 783

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+EM++ +     VT+  LID  CK+G++ EA   +  M +  + P    YT+L+ 
Sbjct: 784 ANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLH 843

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM------T 177
           G      +     LF+EM  + + PD   Y  +ID Y +  +  EA  LK+ +       
Sbjct: 844 GYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPM 903

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           + G  L L   + +  G    G++ EA  +   M+  G + +      L+  +    N +
Sbjct: 904 KSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSE 963

Query: 238 EAIELQNEM 246
           ++  L  +M
Sbjct: 964 DSDNLLKQM 972



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 113/262 (43%), Gaps = 52/262 (19%)

Query: 42  TANTVICTTLMDAYFKAGEPSEALS----------------------------------- 66
           + N+VI   LMD+Y K G   EA++                                   
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR-----------------EAIDYFGRMPDF 109
           + D M   ++   V T+  +I   CK G V+                 EAI+    M D 
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           GL P++  Y  LI+G C +     A+ +  EM    + P+   Y ALIDG+++    ++A
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             +K+ M   G++ +L  + +L+ G+ + G +++A  +  EM+ +G+ PD      L++ 
Sbjct: 331 FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
           H    NM  A EL +EM  R L
Sbjct: 391 HCRGQNMARAFELLDEMKKRKL 412



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 6/147 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N+      Y +++ G        +   L  EM   G+  + +    ++DAY + G 
Sbjct: 826 MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGN 885

Query: 61  PSEALSLLDEML------DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
             EA  L DE+L       S   + + T  V+  G   +G + EA +    M  FG   N
Sbjct: 886 VMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 945

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEM 141
                 L+DG       E + NL  +M
Sbjct: 946 TTSLGDLVDGNQNGANSEDSDNLLKQM 972


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 130/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    K D+  Y TII  LC +    D+   LSEM + G+  N      ++  +   G+
Sbjct: 219 MEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQ 278

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L  EM+   +    VT  +L+DGLCK G+V EA   F  M + G+ PN++ Y A
Sbjct: 279 LNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNA 338

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C +  +  A+ +F+ M ++   P   +Y  LI+G+ K     EA +L   M    
Sbjct: 339 LMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA 398

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y++L+ GL + G  +EA  +F EM   G+LP+ +    LL    + G++DEA+
Sbjct: 399 LNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEAL 458

Query: 241 ELQNEMMGRGL 251
           +L   M  + L
Sbjct: 459 KLLKSMQEKKL 469



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 120/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC E K +++  L +EM   G   N +   T+++   K G  S A+ +  +M 
Sbjct: 161 FNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKME 220

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  +  VVT+  +ID LCK  LV +A+++   M D G+ PNV  Y  ++ G C    + 
Sbjct: 221 QNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLN 280

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM  RD++PDT   T L+DG  K     EA  +   MTE GV+ +++ Y +L+
Sbjct: 281 EATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALM 340

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G      + EA+ +F  MI +G  P       L+    +   MDEA  L  EM  + L
Sbjct: 341 DGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKAL 399



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 118/240 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII GLC       +  +  +M++NG   + V   T++D+  K    ++A+  L EML
Sbjct: 196 YNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEML 255

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I   V T+  ++ G C  G + EA   F  M    + P+    T L+DGLCK+  + 
Sbjct: 256 DRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVS 315

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR +F+ M ++ + P+ + Y AL+DGY       EA  +   M   G    +++Y  L+
Sbjct: 316 EARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILI 375

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   + EA+ L  EM  + + PD +   +L++   + G   EA+ +  EM   GLL
Sbjct: 376 NGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLL 435



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 123/255 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+++  D      ++ GLC E    +++L+   M E G+  N      LMD Y     
Sbjct: 289 MVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRL 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + + M+       V ++ +LI+G CKS  + EA      M    L+P+   Y+ 
Sbjct: 349 MNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYST 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+    + A N+F EM    ++P+   Y+ L+DG+ KH    EAL L   M E  
Sbjct: 409 LMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  +T L+ G+   G L+ A+ LF ++   GI P       ++K   + G  DEA 
Sbjct: 469 LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAY 528

Query: 241 ELQNEMMGRGLLSGS 255
           +L  +M   G L  S
Sbjct: 529 DLFRKMEDDGFLPNS 543



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 115/247 (46%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N +  +  +G  +     + ++     L ++M   G+T N      L++   +      A
Sbjct: 83  NPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFA 142

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +S+L +M    I  T  TF  LI+GLC  G ++EA++ F  M   G  PNV  Y  +I+G
Sbjct: 143 VSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIING 202

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK      A ++F +M +    PD   Y  +ID   K     +A+   + M + G+  +
Sbjct: 203 LCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPN 262

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y  +V G    G L EA  LF EM+GR ++PD +    L+    + G + EA  +  
Sbjct: 263 VFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFE 322

Query: 245 EMMGRGL 251
            M  +G+
Sbjct: 323 TMTEKGV 329



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 121/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y  ++ G C++    ++K +   M   G          L++ + K+  
Sbjct: 324 MTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRR 383

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SLL EM    +    VT+  L+ GLC+ G  +EA++ F  M  +GL PN+  Y+ 
Sbjct: 384 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSI 443

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG CK   ++ A  L   M ++ + P+   +T LI+G       + A  L +++   G
Sbjct: 444 LLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADG 503

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  YT ++ GL + G   EA  LF +M   G LP+      +++   +  +   AI
Sbjct: 504 IRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAI 563

Query: 241 ELQNEMMGR 249
            L +EM+G+
Sbjct: 564 RLIDEMVGK 572



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 99/192 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y T++ GLC   + +++  +  EM   GL  N V  + L+D + K G 
Sbjct: 394 MYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGH 453

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL  M + ++E  +V   +LI+G+  +G +  A + F ++   G+ P +  YT 
Sbjct: 454 LDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTV 513

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GL K+   + A +LF +M     +P++ +Y  +I G+L+++    A+ L + M    
Sbjct: 514 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 573

Query: 181 VDLDLNAYTSLV 192
              +L+ +  L+
Sbjct: 574 FSANLSTFQMLL 585



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 70/150 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  Y  ++ G C     +++  LL  M+E  L  N V  T L++  F AG+   A  L 
Sbjct: 437 NLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELF 496

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            ++    I  T+ T+ V+I GL K GL  EA D F +M D G  PN   Y  +I G  + 
Sbjct: 497 SKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQN 556

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID 158
                A  L DEM  +    + + +  L+D
Sbjct: 557 QDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL+    M+      +V  F   +    K       +    +M  FG+  NV     LI
Sbjct: 71  DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLI 130

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC+ N ++ A ++  +M K  + P  + + ALI+G       KEA+ L N M   G +
Sbjct: 131 NCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE 190

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++ +Y +++ GL + G+   A  +F +M   G  PD +   +++    +   +++A+E 
Sbjct: 191 PNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEF 250

Query: 243 QNEMMGRGL 251
            +EM+ RG+
Sbjct: 251 LSEMLDRGI 259



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 73/155 (47%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + +A+  F RM      P+VA +   +    KK       +L ++M    +  +  +   
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI+   +      A+++  +M ++G+    + + +L+ GL   G ++EA  LF+EM+ RG
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             P+ I   +++    + GN   A+++  +M   G
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG 223



 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 43/83 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+  +  Y  +I GL  E   +++  L  +M+++G   N+     ++  + +  + S A+
Sbjct: 504 IRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAI 563

Query: 66  SLLDEMLDSRIEVTVVTFCVLID 88
            L+DEM+  R    + TF +L+D
Sbjct: 564 RLIDEMVGKRFSANLSTFQMLLD 586


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 128/240 (53%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+ +Y TII GLC +    ++  + SE+K  G+  +    + LM     + +  EA +
Sbjct: 221 RPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASA 280

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L +EM+   I   VVTF +L+D LCK G++ EA      M + G+ PN A Y +L++G C
Sbjct: 281 LFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYC 340

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            +N +  AR +FD M  +  +P+  +Y  LI+GY K +   EA  L + M+  G+  +  
Sbjct: 341 LQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTF 400

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +L+ GL + G   EAR LF +M  +G  PD + C  LL    + G +D A+ L   M
Sbjct: 401 NYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 132/259 (50%), Gaps = 4/259 (1%)

Query: 3   GKNIK----ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
           GK IK     D   + ++I GLC E KF  +     EM  +G   N     T++  + K 
Sbjct: 143 GKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKI 202

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ + A+ LL +M  +     +V +  +IDGLCK  LV EA+D F  +   G+ P+V  Y
Sbjct: 203 GKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTY 262

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + L+ GLC  +  E A  LF+EM   +++PD   +  L+D   K     EA  +   M E
Sbjct: 263 SILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIE 322

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            GV+ +   Y SL+ G      + EAR++F  MI +G +P+ +    L+  + +   +DE
Sbjct: 323 KGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDE 382

Query: 239 AIELQNEMMGRGLLSGSKN 257
           A EL +EM  RGL+  + N
Sbjct: 383 ARELFDEMSFRGLIPNTFN 401



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 113/236 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KGK ++ D+  Y  ++ GLC   + E++  L +EM    +  + V    L+D   K G 
Sbjct: 250 IKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGM 309

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  ++  M++  +E    T+  L++G C    V EA   F  M   G  PNV  Y  
Sbjct: 310 LSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   I+ AR LFDEM  R +IP+T  Y  LI G  +     EA  L   M   G
Sbjct: 370 LINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQG 429

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              DL   T L+  L + G+L  A  LF  M    + P+ +    L++  Y+ G +
Sbjct: 430 CSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 96/201 (47%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L++ + +      A S+L +++    E   VTF  LI+GLC       A+++F  M   G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PN+  Y  +I G CK      A  L  +M K    PD   Y  +IDG  K     EAL
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           ++ + +   GV  D+  Y+ L+ GL      +EA  LF+EM+   I+PD +    L+ K 
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + G + EA  +   M+ +G+
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGV 325



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 100/232 (43%)

Query: 21  CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           C  +  ED+    + M         V    L+ A  +       LSL   +   RIE  V
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
             F +LI+   +   V  A    G++   G  P+   +++LI+GLC ++   RA   FDE
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M      P+   Y  +I G+ K      A+ L  +M + G   D+  Y +++ GL +   
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           + EA  +F E+ G+G+ PD      L+         +EA  L NEMM   ++
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIM 291



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 56/121 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C   + ++++ L  EM   GL  NT    TL+    +AG   EA  L  +M 
Sbjct: 367 YNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQ 426

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT  +L+D LCK G +  A+  F  M D  L PN+  Y  LI  + K   I 
Sbjct: 427 AQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIY 486

Query: 133 R 133
           R
Sbjct: 487 R 487


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  139 bits (350), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 131/240 (54%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ ++ +Y TII  +C      ++  L SEM   G++ + V  + L+  +F  G+  
Sbjct: 171 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLK 230

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L ++M+   I+  V TF +L+DG CK G ++E    F  M   G+ PNV  Y +L+
Sbjct: 231 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 290

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C    + +A ++F+ M +  + PDT +Y  +I+G+ K +   EA+NL  +M    + 
Sbjct: 291 DGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNII 350

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  YTSL+ GL + G +  A  L  EM  RG+ PD I   S+L    +   +D+AI L
Sbjct: 351 PNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIAL 410



 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 134/261 (51%), Gaps = 16/261 (6%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +NIK D+  +  ++ G C + K ++ K + + M + G+  N V   +LMD Y    + ++
Sbjct: 242 ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNK 301

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+ + M    +     ++ ++I+G CK   V EA++ F +M    + PNV  YT+LID
Sbjct: 302 ANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLID 361

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV---- 179
           GLCK   I  A  L DEM  R + PD   Y++++D   K+    +A+ L  ++ +     
Sbjct: 362 GLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFED 421

Query: 180 ----GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHY 231
               G +LD+ AYT ++ G    G   EA  L  +M   G +PD    EI+ +SL KK  
Sbjct: 422 LFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDE 481

Query: 232 ERGNMDEAIELQNEMMGRGLL 252
                D A +L  EM+ RGLL
Sbjct: 482 N----DMAEKLLREMIARGLL 498



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 124/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  LL  +    +  N V+  T++D+  K    +EA  L  EM+
Sbjct: 146 YGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 205

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G    G +++AID F +M    + P+V  +  L+DG CK   ++
Sbjct: 206 SEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMK 265

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + +F  M K+ + P+   Y +L+DGY   +   +A ++ N M + GV+ D  +Y  ++
Sbjct: 266 EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMI 325

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   + EA  LF +M  + I+P+ +   SL+    + G +  A++L +EM  RG+
Sbjct: 326 NGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGV 384



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 121/252 (48%), Gaps = 13/252 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G I+  L   + +  +  L  +M+  G+ +N V    L++ + + G+   + S+   +L
Sbjct: 63  FGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANIL 122

Query: 73  DSRIEVTVVT-------------FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
               +  V+T             +  LI+GLCK G  R A+    R+    + PNV +Y 
Sbjct: 123 KKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYN 182

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +ID +CK   +  A +L+ EM    + PD   Y+ALI G+      K+A++L N+M   
Sbjct: 183 TIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILE 242

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            +  D+  +  LV G  + G ++E + +F  M+ +GI P+ +   SL+  +     +++A
Sbjct: 243 NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKA 302

Query: 240 IELQNEMMGRGL 251
             + N M   G+
Sbjct: 303 NSIFNTMAQGGV 314



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 8/155 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI  ++  Y ++I GLC   K   +  L+ EM + G+  + +  ++++DA  K  +
Sbjct: 344 MHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQ 403

Query: 61  PSEALSLLDEMLDSRIE--------VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH 112
             +A++LL ++ D   E        + V  + V+I G C  GL  EA+    +M D G  
Sbjct: 404 VDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRI 463

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
           P+   Y  +I  L KK+  + A  L  EM  R ++
Sbjct: 464 PDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 129/283 (45%), Gaps = 35/283 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T++ GLC E +  D++ LL+EMKE G+  +    TTL+  Y + G   +AL   
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF 427

Query: 69  DEMLDSRIEVTVVTF-----------------------------------CVLIDGLCKS 93
           D + D R+   +VT+                                    +LID  C+ 
Sbjct: 428 DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G V  A  +   M + G+ PN+  Y ++I G C+   + + +    +M    ++PD   Y
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITY 547

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             LI GY+K     EA NL   M    V  D   Y  ++ G S  G++QEA  ++ +M  
Sbjct: 548 NTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA 607

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           RGI PD    +S++  H   GN  ++ +L +EM+ +GL    K
Sbjct: 608 RGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDK 650



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 130/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  +  +I G C   + E++     EM+   +T + V  + L+  + + GE
Sbjct: 255 MDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGE 314

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A   L EM +  +    V + ++I G C++GL+ EA+     M  FG  P+V  Y  
Sbjct: 315 MDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNT 374

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GLCK+  +  A  L +EM +R + PD   +T LI GY +  + ++AL   + +++  
Sbjct: 375 LLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR 434

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y +L+ G+ R G L +A  L+ +M  R I P+ +    L+  H E+G +D A 
Sbjct: 435 LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAF 494

Query: 241 ELQNEMMGRGLL 252
              +EM+ +G++
Sbjct: 495 AFLDEMVNKGIV 506



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 123/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK  L  Y +++ GL    +++ ++ +   M   G+  +      L+  + +AGE
Sbjct: 220 MVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGE 279

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL    EM   R+   VV+F  LI    + G +  A +Y   M +FGL P+  +YT 
Sbjct: 280 LEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTM 339

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   +  A  + DEM     +PD   Y  L++G  K     +A  L N M E G
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  DL  +T+L+ G  R G++++A   F  +  + + PD +   +L+     +G++ +A 
Sbjct: 400 VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKAN 459

Query: 241 ELQNEMMGRGLL 252
           EL ++M  R + 
Sbjct: 460 ELWDDMHSREIF 471



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 118/242 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D  +Y  +I G C      ++  +  EM   G   + V   TL++   K   
Sbjct: 325 MREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL+EM +  +   + TF  LI G C+ G + +A+ +F  + D  L P++  Y  
Sbjct: 385 LSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNT 444

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG+C++  + +A  L+D+M  R++ P+   Y+ LID + +      A    + M   G
Sbjct: 445 LIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y S++ G  R G++ + +    +M    ++PD I   +L+  + + G M EA 
Sbjct: 505 IVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAF 564

Query: 241 EL 242
            L
Sbjct: 565 NL 566



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 119/236 (50%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++   C   +F +   ++SEM++  +  + V    ++DA F+AG+   A++L+D M+   
Sbjct: 165 MVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKG 224

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I+  +VT+  ++ GL ++G   +A + F  M   G+ P+V  +  LI G C+   +E A 
Sbjct: 225 IKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEAL 284

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
             + EM  R + PD  +++ LI  + +      A      M E G+  D   YT ++ G 
Sbjct: 285 RFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGF 344

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            R G + EA  +  EM+  G LPD +   +LL    +   + +A EL NEM  RG+
Sbjct: 345 CRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGV 400



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           +AG P         +L S  EV   T  +++   CK+    E       M    + P+V 
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +  ++D   +   +E A  L D M  + + P    Y +++ G L++  + +A  +   M
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              GV  D+ ++  L+ G  R G L+EA   + EM GR + PD +    L+     RG M
Sbjct: 256 DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEM 315

Query: 237 DEAIELQNEMMGRGLL 252
           D A E   EM   GL+
Sbjct: 316 DHAAEYLREMREFGLM 331



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 4/223 (1%)

Query: 30  KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG 89
           +L+LS   E     NT     ++ +Y K  +  E  +++ EM    +   VVT  V++D 
Sbjct: 148 RLVLSSNSE----VNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDA 203

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
             ++G V  A+     M   G+ P +  Y +++ GL +    ++AR +F  M    + PD
Sbjct: 204 RFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPD 263

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
             ++  LI G+ +    +EAL     M    V  D+ +++ L+   +R G +  A     
Sbjct: 264 VRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLR 323

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           EM   G++PD ++   ++      G M EA+ +++EM+  G L
Sbjct: 324 EMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCL 366



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 88/218 (40%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           ++S +  +  T    +   L+  Y ++ +P EA      +LD R+ +       L+  L 
Sbjct: 76  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALS 135

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           ++G      D +  +       N      ++   CK         +  EM KR + PD  
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +  ++D   +    + A+ L + M   G+   L  Y S++ GL R G   +AR +F  M
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
              G+ PD      L+      G ++EA+    EM GR
Sbjct: 256 DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGR 293


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 126/244 (51%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A+   YG +I G C   + + +++L++EM+  GL  N VI  TL++ Y K G   EAL +
Sbjct: 353 ANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRM 412

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            D M     E  + T+  +  GLCK     EA  +   M + G+ PN   +T +ID  CK
Sbjct: 413 QDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCK 472

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           +  +  A  +F +M K+   P+   Y  LIDGY K    KEA  LK+ M  +G+  D+  
Sbjct: 473 EGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYT 532

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+LV G    G ++EA  L +E+  +G+    +   +++    + G  +EA  L +EMM
Sbjct: 533 YTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMM 592

Query: 248 GRGL 251
             GL
Sbjct: 593 AAGL 596



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 122/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK IK ++  Y T++        FE    +L  M+ + +  N    T L++ Y  +G+
Sbjct: 241 MTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGK 300

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + ++ML+  +E  +  F  +I   CK G ++ A   F  + + GL  N   Y A
Sbjct: 301 IAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGA 360

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    ++ A  L +EM  + +  +   +  LI+GY K     EAL +++ M + G
Sbjct: 361 LIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKG 420

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+  Y ++  GL +    +EA+     M+ +G+ P+ +    ++  H + GN+ EA 
Sbjct: 421 FENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAE 480

Query: 241 ELQNEMMGRG 250
            +  +M  +G
Sbjct: 481 RVFQDMKKKG 490



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 110/228 (48%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           S FE+   +   M  NGL  +   C   + A  ++ +   +L    +M++ +++VTV + 
Sbjct: 159 SMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSM 218

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            ++IDGLCK G V  A D    M   G+ PNV  Y  L++   K    E    +   M  
Sbjct: 219 TIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEM 278

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
             ++ +   YT LI+ Y       EA  +  +M E GV+ D++ +TS++    + G+++ 
Sbjct: 279 DKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKR 338

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A  LF E+  RG++ +     +L+      G +D A  L NEM  +GL
Sbjct: 339 AFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGL 386



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 96/197 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  + D+  Y TI  GLC  ++ E++K  L  M E G+  N V  T ++D + K G 
Sbjct: 416 MEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGN 475

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +  +M     +  VVT+  LIDG  K G ++EA      M   G+  ++  YT 
Sbjct: 476 LVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTT 535

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    +E A  L +E+ ++ +      YTA+I G  K    +EA  L + M   G
Sbjct: 536 LVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAG 595

Query: 181 VDLDLNAYTSLVWGLSR 197
           +  D   YTSLV  L +
Sbjct: 596 LTPDDRVYTSLVANLHK 612



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 5/253 (1%)

Query: 6   IKADLPLYGTIIWGLCIE-----SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ D  +Y    + L IE      K  +++ +  +M E G+ A+  + T+++    K G 
Sbjct: 276 MEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGN 335

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L DE+ +  +     T+  LI G C SG +  A      M   GL  N+ ++  
Sbjct: 336 MKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNT 395

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CKK  I+ A  + D M K+    D   Y  +  G  K    +EA      M E G
Sbjct: 396 LINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKG 455

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           VD +  ++T ++    + G+L EA  +F +M  +G  P+ +   +L+  + ++G + EA 
Sbjct: 456 VDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAY 515

Query: 241 ELQNEMMGRGLLS 253
            L++EM   G+ S
Sbjct: 516 RLKDEMESIGMTS 528



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 2/210 (0%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           +C  L   Y       E   + D M+ + +++   +  V +  L +S  +  ++ +F +M
Sbjct: 147 LCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKM 206

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            +F +   V   T +IDGLCKK  +ERA++L  EM  + + P+   Y  L++ Y+K   F
Sbjct: 207 VEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDF 266

Query: 167 KEALNLKNRMTEV-GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            E +N   R+ E+  V  +   YT L+      G + EA  +F +M+ RG+  D  +  S
Sbjct: 267 -EGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTS 325

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           ++    + GNM  A  L +E+  RGL++ +
Sbjct: 326 IISWQCKLGNMKRAFALFDELNERGLVANA 355


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + ++P+Y  ++ GLC   + E +  L +EMK +  + + V   TL+DA  KA  
Sbjct: 176 MPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARR 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L + M  +     V+TF  LI GLC++G + +A++ FG M + G  PN   YT 
Sbjct: 236 VEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT-EV 179
           LI GLC+   + +AR LF++M +  + PD  AY +LI GY K  S  EA  L   M+   
Sbjct: 296 LISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGA 355

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+   +  + +L+ G  + G L  A  L  EM  +G+  D      L+        +DEA
Sbjct: 356 GLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEA 415

Query: 240 IELQNEMMGRGLL 252
           +E+  +M  +  L
Sbjct: 416 LEVYKQMREKKFL 428



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 124/277 (44%), Gaps = 35/277 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D   Y  +I GL    K ++S  +LSEM   G T +    ++L+ A  KA     A S
Sbjct: 77  KPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASS 136

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L DEM+        + F  LI GLC++G V++A + F +MP  G  PNV VY  L+ GLC
Sbjct: 137 LFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLC 196

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE------------------ 168
               +E+A  LF EM      PD   Y  L+D   K    +E                  
Sbjct: 197 SSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVI 256

Query: 169 -----------------ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
                            AL +   M E G   +   YT+L+ GL R   + +AR LF +M
Sbjct: 257 TFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKM 316

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
               I PD +   SL+  + +RG+MDEA +L  EM G
Sbjct: 317 TQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG 353



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 119/248 (47%), Gaps = 1/248 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  ++  +I GLC   K +D+     +M ++G   N  +   L+     +G+  +A +L 
Sbjct: 149 DRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLF 208

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM        VVT+  L+D +CK+  V E    F  M   G  PNV  ++ LI GLC+ 
Sbjct: 209 AEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRT 268

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E+A  +F  M +    P+   YT LI G  + E   +A  L  +MT+  +  D  AY
Sbjct: 269 GELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAY 328

Query: 189 TSLVWGLSRCGHLQEARVLFHEMI-GRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            SL+ G  + G + EA  L+ EM  G G+ P  +   +L+    + G +  A EL  EM 
Sbjct: 329 NSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMG 388

Query: 248 GRGLLSGS 255
            +GL + S
Sbjct: 389 TKGLAADS 396



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 114/240 (47%), Gaps = 1/240 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  +   D+  Y T++  +C   + E+   L   M+  G   N +  +TL+    + GE
Sbjct: 211 MKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGE 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL +   ML++  +    T+  LI GLC++  V +A + F +M    + P+   Y +
Sbjct: 271 LEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNS 330

Query: 121 LIDGLCKKNCIERARNLFDEMP-KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI G CK+  ++ A  L+ EM     + P    +  LIDG+ K      A  L   M   
Sbjct: 331 LIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 390

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D   Y  L+ GLSR   L EA  ++ +M  +  L D + C+S +    + GN+D+A
Sbjct: 391 GLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQA 450



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ KNI A++  Y +II  L  E+K E+S  +L EM   G   +      +M  + ++  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +   M++S  +   V++ +LI GL K G + E++     M   G  P++  Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+  L K   ++ A +LFDEM +    PD   +  LI G  +    K+A     +M + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y  L+ GL   G L++A  LF EM      PD +   +LL    +   ++E  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 241 ELQNEMMGRGLL 252
           +L   M   G +
Sbjct: 241 KLFEAMRAAGYV 252



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 105/233 (45%), Gaps = 5/233 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      ++  + T+I GLC   + E +  +   M E G   N    TTL+    +A +
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD-FGLHPNVAVYT 119
             +A  L ++M  + I    V +  LI G CK G + EA   +  M    GL P +  + 
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LIDG CK   + RA  L  EM  + +  D+  Y  LI G  +     EAL +  +M E 
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLK 228
              LD  +  S V GL + G++ +A  +F      G +P+     IL  SL+K
Sbjct: 426 KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIK 478



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 66/144 (45%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  ++  +  + T+I G C   K   +  L++EM   GL A++     L+    +A +  
Sbjct: 354 GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLD 413

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL +  +M + +  +  V+    + GLCK+G + +A   F      G  PN   +  L 
Sbjct: 414 EALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILS 473

Query: 123 DGLCKKNCIERARNLFDEMPKRDM 146
           + L K   +E A+ L +    RD+
Sbjct: 474 ESLIKLGRVEDAQKLMEPAKARDI 497


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 133/244 (54%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y TII GLC +    ++    SEM   G+  N +  TTL+  +  AG+ + A SLL
Sbjct: 191 NVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLL 250

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM+   I   V T+ +LID LCK G V+EA +    M   G   +V  YT+L+DG CK 
Sbjct: 251 NEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKN 310

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +++A  LF +M +  + P+   YTALIDG  K    K+A  L   +   G  +D+  Y
Sbjct: 311 QNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTY 370

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             ++ GL + G L EA  +  +M   G +P+ +    +++  +++   D+A +L +EM+ 
Sbjct: 371 NVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIA 430

Query: 249 RGLL 252
           +GLL
Sbjct: 431 KGLL 434



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 120/236 (50%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T++ GLC++ + + S     ++   G   N V   TL++   K GE   A+  L  + DS
Sbjct: 127 TLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDS 186

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
              + VV +  +IDGLCK  LV EA D++  M   G+ PNV  YT LI G C    +  A
Sbjct: 187 STGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGA 246

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            +L +EM  +++ P+   Y  LID   K    KEA NL   M   G   D+  YTSL+ G
Sbjct: 247 FSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDG 306

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +  +L +A  LF +M   GI P++    +L+    + G + +A +L  +++ +G
Sbjct: 307 FCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKG 362



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ +L     +I   C   +   S  +L ++ + G   NT+  TTLM      GE
Sbjct: 78  MEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGE 137

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +++   D+++    ++  V++  L++GLCK G  R AI +   + D     NV +Y  
Sbjct: 138 VQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNT 197

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   +  A + + EM  R + P+   YT LI G+        A +L N M    
Sbjct: 198 IIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKN 257

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y  L+  L + G ++EA+ L  EM  RG   D +   SLL    +  N+D+A 
Sbjct: 258 INPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKAT 317

Query: 241 ELQNEMMGRGL 251
            L  +M   G+
Sbjct: 318 ALFMKMKEWGI 328



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 88/186 (47%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S A+SL  +M    IE  +VT  +LI+  C  G +  +    G++   G  PN    T L
Sbjct: 69  STAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTL 128

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           + GLC K  ++++ +  D++  +    +  +Y  L++G  K    + A+     + +   
Sbjct: 129 MKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSST 188

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            L++  Y +++ GL +   + EA   + EM  RGI P+ I   +L+      G +  A  
Sbjct: 189 GLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFS 248

Query: 242 LQNEMM 247
           L NEM+
Sbjct: 249 LLNEMI 254


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 128/250 (51%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  ++ D+  + T+I GLC E + + +  +   M E G   N   C  L+  Y K+G   
Sbjct: 250 GNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIID 309

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L   +    +  +  T+ V+IDG CK  ++  A   F RM   GL P +  Y  L+
Sbjct: 310 KAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLM 369

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
             LCK++ +E+AR LF EM + +  PDT ++  +IDG LK      A  L N M ++G+ 
Sbjct: 370 ASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLT 429

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   Y+S +  LS+ G ++EA+  F  MI  GI PD  +  SL+K       ++E I L
Sbjct: 430 PDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINL 489

Query: 243 QNEMMGRGLL 252
             +M   G++
Sbjct: 490 LRQMADMGVI 499



 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 138/257 (53%), Gaps = 2/257 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K ++ D+ +Y T+I G C +   +  K L  EM E G++ N V+ + L++ + K G 
Sbjct: 71  MKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGL 130

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L  M +  I+  V T+  +I GLCK G  R+A+D F  M + G  P+   Y  
Sbjct: 131 WREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNV 190

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK+ CI  A  +F+ M ++    +  +Y  LI G   +    EA+ L + + E G
Sbjct: 191 LINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDG 250

Query: 181 --VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             V+ D+  + +++ GL + G L +A  ++  MI RG   +   C  L+ ++ + G +D+
Sbjct: 251 NYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDK 310

Query: 239 AIELQNEMMGRGLLSGS 255
           A+EL   +   GL+  S
Sbjct: 311 AMELWKRVHKLGLVPSS 327



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 126/250 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  NI  D+  Y TII GLC E + E +  LL EM+ +    N+     LMD   K G 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL EM    +EV VV +  LI G C  G +      F  M + G+ PNV VY+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CKK     A  +   M +R + PD   YT +I G  K    ++AL+L + MTE G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +     Y  L+ GL + G + +A  +F  M+ +G   + +   +L+      G +DEA+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 241 ELQNEMMGRG 250
           +L + ++  G
Sbjct: 241 KLFSSLLEDG 250



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 37/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D+  Y  +I GLC + +   +  L   M E G   +TV    L++   K G 
Sbjct: 141 MTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGC 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG--LHPNVAVY 118
             +A  + + ML+    + VV++  LI GLC +G + EA+  F  + + G  + P+V  +
Sbjct: 201 IGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITF 260

Query: 119 TALIDGLCKKNCIERARNLFDEMPKR---------------------------------- 144
             +I GLCK+  +++A  ++D M +R                                  
Sbjct: 261 NTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHK 320

Query: 145 -DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
             ++P +T Y+ +IDG+ K      A  L +RM   G+   L  Y +L+  L +   L++
Sbjct: 321 LGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQ 380

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           AR LF EM      PD I    ++    + G++  A EL N+M   GL
Sbjct: 381 ARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGL 428



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C       +K L S MK +GL+       TLM +  K     +A  L  EM 
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMK 389

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S  E   ++F ++IDG  K+G +  A +    M   GL P+   Y++ I+ L K   +E
Sbjct: 390 ESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQME 449

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+  FD M    + PD   Y +LI G+  ++  +E +NL  +M ++GV LDL    S++
Sbjct: 450 EAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSIL 509



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 77/146 (52%)

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M    + P++  Y  +I+GLCK+  +E+A +L  EM      P++  Y  L+DG  K   
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            +EA+ L   M   G+++D+  Y++L+ G    G L   + LF EM+ +GI P+ ++   
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGL 251
           L+    ++G   EA  + + M  RG+
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGI 146



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +   L  Y T++  LC ES  E ++ L  EMKE+    +T+    ++D   KAG+
Sbjct: 353 MKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGD 412

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL++M    +     T+   I+ L K G + EA   F  M   G+ P+  VY +
Sbjct: 413 IHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDS 472

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           LI G    + IE   NL  +M    +I D
Sbjct: 473 LIKGFGLNDEIEEVINLLRQMADMGVILD 501



 Score = 43.9 bits (102), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 58/126 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  N + D   +  +I G         +K LL++M++ GLT +    ++ ++   K G+
Sbjct: 388 MKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQ 447

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA    D M+ S I      +  LI G   +  + E I+   +M D G+  ++ +  +
Sbjct: 448 MEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNS 507

Query: 121 LIDGLC 126
           ++  LC
Sbjct: 508 ILTFLC 513


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  139 bits (349), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 128/250 (51%), Gaps = 3/250 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+ + D   +  ++ GLC  ++ E ++ LL  MKE G   +  I   L+  Y KA +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A   L EM+ +    TVVT+  ++DGLCK+G  ++A+     M D G  PN+  Y  
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLC++  ++ A+ + +EM  R   PD   Y + I G  K +   EA     RM    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 177

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+ +YT+++ GL + G L  A  +  +M  RG  PD +   SL+    + G ++ A+
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 241 ELQNEMMGRG 250
            L + M+  G
Sbjct: 238 GLLDSMLKLG 247



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 1/245 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y T+I GLC     + +  +L +M   G T + V  ++L+D + K GE   A+
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LLD ML       +V +  L+  L + G + +A D    M   G  P+V  Y A IDGL
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +++A+ +FD M +R   P+ ++Y+ L++   K +   +A+ L  +  E    +D+
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDI 357

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL-PDEILCISLLKKHYERGNMDEAIELQN 244
             YT L+ GL + G   EA  LF +++   I  PD      +L  H +R  +D+A+++  
Sbjct: 358 LLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHK 417

Query: 245 EMMGR 249
           +M+ R
Sbjct: 418 QMLER 422



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 8/200 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++ GLC++ +  D++ +L  M + G   + V   TL+DA  K G+ + AL L +E +
Sbjct: 430 WNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAV 489

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VVT+  LI GL    +  EA   F ++       +VA++ A+I G  +    +
Sbjct: 490 KGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSGD 542

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYL-KHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
               LF E+ + D+ P+   +   I G L K ES  +A  L +R  + G   DL    +L
Sbjct: 543 LGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTL 602

Query: 192 VWGLSRCGHLQEARVLFHEM 211
           +   ++CG L+EAR +F+ M
Sbjct: 603 IDVFAKCGDLEEARRIFYSM 622



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 33/262 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSE-MKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           D+ LY  ++ GLC   +F+++  L S+ + E     +      ++D++ K  +  +AL +
Sbjct: 356 DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI 415

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             +ML+ R    VVT+ +L+ GLC    + +A      M D G  P+   Y  L+D +CK
Sbjct: 416 HKQMLE-RNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCK 474

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA------------------ 169
                 A  LF+E  K   +PD   Y+ALI G L HE+  E                   
Sbjct: 475 CGKSAAALELFEEAVKGGCVPDVVTYSALITG-LVHENMAEEAYLLFTKLDVALWNAMIL 533

Query: 170 ---------LNLKNRMTEVGVDLDLNAYT---SLVWGLSRCGHLQEARVLFHEMIGRGIL 217
                    L LK  +  +  D++ NA T    +   L +   L +AR LF   +  G  
Sbjct: 534 GYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFF 593

Query: 218 PDEILCISLLKKHYERGNMDEA 239
           PD  +  +L+    + G+++EA
Sbjct: 594 PDLFVANTLIDVFAKCGDLEEA 615


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K +   Y +II  LC   K  +++ +L EM    +  + V+ TTL+  +FK G 
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A    DEML  +I    +T+  LI G  + G V E  + F  M   GL P+   YT 
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK   +  A +L +EM +  M P+   Y ALIDG  KH     A  L + M + G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L++  Y S+V G+ + G++++A  L  EM   GI PD I   +++  +   G++D+A 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 241 ELQNEMMGRGL 251
           +L  EM+ RGL
Sbjct: 559 KLLQEMLDRGL 569



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 127/255 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D   Y T+I G     K  + + L  EM   GL  + V  TTL+D Y KAGE
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SL +EM+   +   +VT+  LIDGLCK G +  A +    M   GL  NV +Y +
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G+CK   IE+A  L  EM    + PD   YT +ID Y +     +A  L   M + G
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  +  L+ G    G L++   L   M+ +GI+PD I   +L+K+H  R +M+   
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628

Query: 241 ELQNEMMGRGLLSGS 255
           ++   M  +G+   S
Sbjct: 629 KIYKRMRNQGVAPDS 643



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 134/253 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K ++ ++ +Y +++ G+C     E +  L+ EM+  G+  + +  TT++DAY + G+
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL EMLD  ++ TVVTF VL++G C  G++ +     G M + G+ P+   Y  
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C +N +     ++  M  + + PD+  Y  LI G+ K  + KEA  L   M E G
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG 673

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               + +Y +L+    +   + EAR LF EM G G++ D  +    +   YE G+++  +
Sbjct: 674 YVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITL 733

Query: 241 ELQNEMMGRGLLS 253
            L +E + + LL+
Sbjct: 734 NLCDEAIEKCLLN 746



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 122/241 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I GLC   + + +  LL EM++ GL  N  I  ++++   KAG   +A+ L+ EM 
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + I+   +T+  +ID  C+ G + +A      M D GL P V  +  L++G C    +E
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L   M ++ ++PD   Y  L+  +    S      +  RM   GV  D N Y  L+
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +  +L+EA  L+ EMI +G +P      +L+K+ Y++  + EA EL  EM G GL+
Sbjct: 651 KGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLV 710

Query: 253 S 253
           +
Sbjct: 711 A 711



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++   D+  Y T+I G C   + + +  L+ +M+  GL  N     +++    K G+
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L EM+  +I    V +  LI G  K G VR A  +F  M    + P+   YT 
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTT 403

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  +   +   +NLF EM  R + PD   YT LID Y K      A +L N M ++G
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ GL + G L  A  L  EM  +G+  +  +  S++    + GN+++AI
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523

Query: 241 ELQNEMMGRGL 251
           +L  EM   G+
Sbjct: 524 KLMKEMEVAGI 534



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D  +Y T+I G         +     EM    ++ + +  TTL+  + + G+
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK 413

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  +L  EM+   ++   VT+  LID  CK+G +  A      M   G+ PN+  Y A
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGA 473

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   ++ A  L DEM K+ +  +   Y ++++G  K  + ++A+ L   M   G
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D D   YT+++    R G + +A  L  EM+ RG+ P  +    L+      G +++  
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593

Query: 241 ELQNEMMGRGLL 252
            L   M+ +G++
Sbjct: 594 RLLGWMLEKGIV 605



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 106/214 (49%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           E G++ NT     ++ +  + G+  EA  LL +M        VV++  +IDG C  G ++
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +A+     M   GL PN   Y ++I  LCK      A  +  EM  + +IPD   YT LI
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G+ K    + A    + M    +  D   YT+L+ G  + G + E + LFHEMI RG+ 
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           PDE+   +L+  + + G M  A  L NEM+  G+
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 116/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II+ LC   K +++  LL +M     T + V  +T++D Y   GE  +AL L+D+M 
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++    T+  +I  LCK G   EA      M    + P+  VYT LI G  K   + 
Sbjct: 321 IKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVR 380

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   FDEM  + + PD   YT LI G+ +     E  NL + M   G+  D   YT+L+
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI 440

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               + G +  A  L +EM+  G+ P+ +   +L+    + G +D A EL +EM  +GL
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499



 Score = 38.9 bits (89), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 39/207 (18%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN-CIERARNLFD 139
           + F +    L + G + EA     ++  +GL   V    A +  +   +  IE A  +F 
Sbjct: 191 IAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFC 250

Query: 140 EMPKRDMIPDTTAYT-----------------------------------ALIDGYLKHE 164
           E     +  +TT+Y                                     +IDGY    
Sbjct: 251 EY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             K+AL L + M   G+  +   Y S++  L + G   EA  +  EM+ + I+PD ++  
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L+   ++ G++  A +  +EM+ + +
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKI 394


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K +   Y +II  LC   K  +++ +L EM    +  + V+ TTL+  +FK G 
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A    DEML  +I    +T+  LI G  + G V E  + F  M   GL P+   YT 
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK   +  A +L +EM +  M P+   Y ALIDG  KH     A  L + M + G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L++  Y S+V G+ + G++++A  L  EM   GI PD I   +++  +   G++D+A 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 241 ELQNEMMGRGL 251
           +L  EM+ RGL
Sbjct: 559 KLLQEMLDRGL 569



 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 127/255 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D   Y T+I G     K  + + L  EM   GL  + V  TTL+D Y KAGE
Sbjct: 389 MLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGE 448

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SL +EM+   +   +VT+  LIDGLCK G +  A +    M   GL  NV +Y +
Sbjct: 449 MVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS 508

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G+CK   IE+A  L  EM    + PD   YT +ID Y +     +A  L   M + G
Sbjct: 509 MVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG 568

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  +  L+ G    G L++   L   M+ +GI+PD I   +L+K+H  R +M+   
Sbjct: 569 LQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628

Query: 241 ELQNEMMGRGLLSGS 255
           ++   M  +G+   S
Sbjct: 629 KIYKRMRNQGVAPDS 643



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 133/253 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K ++ ++ +Y +++ G+C     E +  L+ EM+  G+  + +  TT++DAY + G+
Sbjct: 494 MRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL EMLD  ++ TVVTF VL++G C  G++ +     G M + G+ P+   Y  
Sbjct: 554 IDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNT 613

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C +N +     ++  M  + + PD+  Y  LI G+ K  + KEA  L   M E G
Sbjct: 614 LMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG 673

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               + +Y +L+    +     EAR LF EM G G++ D  +    +   YE G+++  +
Sbjct: 674 YVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITL 733

Query: 241 ELQNEMMGRGLLS 253
            L +E + + LL+
Sbjct: 734 NLCDEAIEKCLLN 746



 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 121/241 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I GLC   + + +  LL EM++ GL  N  I  ++++   KAG   +A+ L+ EM 
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + I+   +T+  +ID  C+ G + +A      M D GL P V  +  L++G C    +E
Sbjct: 531 VAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLE 590

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L   M ++ ++PD   Y  L+  +    S      +  RM   GV  D N Y  L+
Sbjct: 591 DGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +  +L+EA  L+ EMI +G +P      +L+K+ Y++    EA EL  EM G GL+
Sbjct: 651 KGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLV 710

Query: 253 S 253
           +
Sbjct: 711 A 711



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++   D+  Y T+I G C   + + +  L+ +M+  GL  N     +++    K G+
Sbjct: 284 MDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGK 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L EM+  +I    V +  LI G  K G VR A  +F  M    + P+   YT 
Sbjct: 344 SFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTT 403

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  +   +   +NLF EM  R + PD   YT LID Y K      A +L N M ++G
Sbjct: 404 LIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMG 463

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ GL + G L  A  L  EM  +G+  +  +  S++    + GN+++AI
Sbjct: 464 MTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAI 523

Query: 241 ELQNEMMGRGL 251
           +L  EM   G+
Sbjct: 524 KLMKEMEVAGI 534



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D  +Y T+I G         +     EM    ++ + +  TTL+  + + G+
Sbjct: 354 MMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGK 413

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  +L  EM+   ++   VT+  LID  CK+G +  A      M   G+ PN+  Y A
Sbjct: 414 VIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGA 473

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   ++ A  L DEM K+ +  +   Y ++++G  K  + ++A+ L   M   G
Sbjct: 474 LIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D D   YT+++    R G + +A  L  EM+ RG+ P  +    L+      G +++  
Sbjct: 534 IDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGD 593

Query: 241 ELQNEMMGRGLL 252
            L   M+ +G++
Sbjct: 594 RLLGWMLEKGIV 605



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 106/214 (49%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           E G++ NT     ++ +  + G+  EA  LL +M        VV++  +IDG C  G ++
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +A+     M   GL PN   Y ++I  LCK      A  +  EM  + +IPD   YT LI
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G+ K    + A    + M    +  D   YT+L+ G  + G + E + LFHEMI RG+ 
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           PDE+   +L+  + + G M  A  L NEM+  G+
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 116/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II+ LC   K +++  LL +M     T + V  +T++D Y   GE  +AL L+D+M 
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++    T+  +I  LCK G   EA      M    + P+  VYT LI G  K   + 
Sbjct: 321 IKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVR 380

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   FDEM  + + PD   YT LI G+ +     E  NL + M   G+  D   YT+L+
Sbjct: 381 TANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLI 440

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               + G +  A  L +EM+  G+ P+ +   +L+    + G +D A EL +EM  +GL
Sbjct: 441 DVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499



 Score = 38.9 bits (89), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 39/207 (18%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN-CIERARNLFD 139
           + F +    L + G + EA     ++  +GL   V    A +  +   +  IE A  +F 
Sbjct: 191 IAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFC 250

Query: 140 EMPKRDMIPDTTAYT-----------------------------------ALIDGYLKHE 164
           E     +  +TT+Y                                     +IDGY    
Sbjct: 251 EY---GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             K+AL L + M   G+  +   Y S++  L + G   EA  +  EM+ + I+PD ++  
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L+   ++ G++  A +  +EM+ + +
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKI 394


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 136/253 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K ++  YG  I G C   + + ++    EM ++G+  N VICT L+D Y K G 
Sbjct: 538 MIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGN 597

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A +    MLD  +   V T  VLI GL K+G ++EA+  F  + D GL P+V  YT+
Sbjct: 598 TTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTS 657

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK+  ++ A  L D+M K+ + P+   Y ALI+G  K     +A  L + + E G
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y++++ G  +  +L EA  LFH M   G+ PD  +  +L+    + GN ++A+
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKAL 777

Query: 241 ELQNEMMGRGLLS 253
            L   M+  G+ S
Sbjct: 778 SLFLGMVEEGIAS 790



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K +N+ A+  + G I+ GLC       +  L  EM   GL  N VI TT++    K G 
Sbjct: 433 IKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGR 492

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +L  M D  +   V  +  +I G CK+G + E   Y   M   GL PNV  Y A
Sbjct: 493 FEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGA 552

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G C+   ++ A   F EM    + P+    T LIDGY K  +  +A      M + G
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQG 612

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  ++ L+ GLS+ G LQEA  +F E++ +G++PD     SL+    + G++  A 
Sbjct: 613 VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAF 672

Query: 241 ELQNEMMGRGL 251
           EL ++M  +G+
Sbjct: 673 ELHDDMCKKGI 683



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 122/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  D+  Y T+I G C   K E+ K  L EM   GL  N       +  Y +AGE
Sbjct: 503 MKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGE 562

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EMLDS I    V    LIDG CK G   +A   F  M D G+ P+V  ++ 
Sbjct: 563 MQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSV 622

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL K   ++ A  +F E+  + ++PD   YT+LI    K    K A  L + M + G
Sbjct: 623 LIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKG 682

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y +L+ GL + G + +AR LF  +  +G+  + +   +++  + +  N+ EA 
Sbjct: 683 INPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAF 742

Query: 241 ELQNEM 246
           +L + M
Sbjct: 743 QLFHGM 748



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 125/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y  +I GLC   +   ++ L   + E GL  N+V  +T++  Y K+  
Sbjct: 678 MCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSAN 737

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L   M    +      +C LIDG CK+G   +A+  F  M + G+    A + A
Sbjct: 738 LTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPA-FNA 796

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +  A  L ++M    + P+   YT LI+ +    + KEA  L   M +  
Sbjct: 797 LIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRN 856

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YTSL+ G +R G   E   LF EM+ RGI PD++    ++  H + GN  +A+
Sbjct: 857 VMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKAL 916

Query: 241 ELQNEMMGRGL 251
           +L ++M+  G+
Sbjct: 917 KLVDDMLSEGV 927



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 113/207 (54%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           T L++AY + G+  E   +L +M +      +VT+ V+I GLC++G V EA++    M +
Sbjct: 236 TNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMAN 295

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            GL P+  +Y  LIDG C++      +++ DEM    + PD  AYTALI+G++K      
Sbjct: 296 KGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGG 355

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A  +K  M    + L+   Y +L+ GL + G L++A  LF EM   GI PD      L++
Sbjct: 356 AFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIE 415

Query: 229 KHYERGNMDEAIELQNEMMGRGLLSGS 255
            +Y+  NM++A EL  E+    L + +
Sbjct: 416 GYYKVQNMEKAYELLIEIKKENLTANA 442



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 133/250 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K ++ +Y TI+ GL  E +FE++  +L  MK+ GL+ +     T++  + KAG+  E  
Sbjct: 473 LKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGK 532

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S L EM+   ++  V T+   I G C++G ++ A   F  M D G+ PN  + T LIDG 
Sbjct: 533 SYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGY 592

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK     +A   F  M  + ++PD   ++ LI G  K+   +EA+ + + + + G+  D+
Sbjct: 593 CKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDV 652

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YTSL+  L + G L+ A  L  +M  +GI P+ +   +L+    + G + +A EL + 
Sbjct: 653 FTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDG 712

Query: 246 MMGRGLLSGS 255
           +  +GL   S
Sbjct: 713 IPEKGLARNS 722



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 6/254 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    +L  Y  +I GLC     +++  L   M   GL  +  I  TL+D + +   
Sbjct: 258 MEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKR 317

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +E  S+LDEM    ++   V +  LI+G  K   +  A      M    +  N   Y A
Sbjct: 318 STEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYA 377

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK   +E+A +LF EM    + PD   Y  LI+GY K ++ ++A  L   + E+ 
Sbjct: 378 LIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYEL---LIEIK 434

Query: 181 V-DLDLNAYT--SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
             +L  NAY   ++V GL  CG L  A  LF EMI  G+ P+ ++  +++K   + G  +
Sbjct: 435 KENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFE 494

Query: 238 EAIELQNEMMGRGL 251
           EAI++   M  +GL
Sbjct: 495 EAIKILGVMKDQGL 508



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D  +Y T+I G C + +  + K +L EM   GL  + V  T L++ + K  +
Sbjct: 293 MANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSD 352

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT- 119
              A  + +EM   +I++   T+  LI GLCK G + +A D F  M   G+ P++  Y  
Sbjct: 353 IGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNC 412

Query: 120 ----------------------------------ALIDGLCKKNCIERARNLFDEMPKRD 145
                                             A+++GLC    + RA  LF EM    
Sbjct: 413 LIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWG 472

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+   YT ++ G +K   F+EA+ +   M + G+  D+  Y +++ G  + G ++E +
Sbjct: 473 LKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGK 532

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               EMI +G+ P+     + +  +   G M  A     EM+  G+
Sbjct: 533 SYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGI 578



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 118/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK +   Y  +I GLC     E ++ L SEM   G+  +      L++ Y+K   
Sbjct: 363 MFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQN 422

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL E+    +         +++GLC  G +  A + F  M  +GL PN+ +YT 
Sbjct: 423 MEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTT 482

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GL K+   E A  +   M  + + PD   Y  +I G+ K    +E  +    M   G
Sbjct: 483 IVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKG 542

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y + + G  R G +Q A   F EM+  GI P++++C  L+  + + GN  +A 
Sbjct: 543 LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAF 602

Query: 241 ELQNEMMGRGLL 252
                M+ +G+L
Sbjct: 603 AKFRCMLDQGVL 614



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D  +Y  +I G C     E +  L   M E G+ A+T     L+D +FK G+
Sbjct: 748 MKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGK 806

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+++M+D+ I    VT+ +LI+  C  G ++EA   F  M    + PNV  YT+
Sbjct: 807 LIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTS 866

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G  +        +LFDEM  R + PD  A++ ++D +LK  ++ +AL L + M   G
Sbjct: 867 LLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEG 926

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V++  N YT L+  L +  +L E   +  E+  +G       C +L+   +  G  DEA+
Sbjct: 927 VNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEAL 986

Query: 241 ELQNEMM 247
            +   M+
Sbjct: 987 RVLESMV 993



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 34/203 (16%)

Query: 83  FCVLIDGLCKSGLVREAIDYF--GRMPDF------------------------------- 109
           F +LID   K G + EA+  F   +  +F                               
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225

Query: 110 -GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
             + P+V  YT LI+  C+   +E  +++  +M ++  IP+   Y+ +I G  +     E
Sbjct: 226 GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDE 285

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           AL LK  M   G+  D   Y +L+ G  R     E + +  EM   G+ PD +   +L+ 
Sbjct: 286 ALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALIN 345

Query: 229 KHYERGNMDEAIELQNEMMGRGL 251
              ++ ++  A +++ EM  R +
Sbjct: 346 GFVKQSDIGGAFQVKEEMFARKI 368



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 24/193 (12%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV----------------------YT 119
           TF +L   LC SGL   A +   RM D   +P+V +                      + 
Sbjct: 109 TFSILSLILCNSGLFGNAANVLERMID-TRNPHVKILDSIIKCYKEINGSSSSSSVVVFE 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LID   KK  +  A ++F      + I       +L    LK    +    +   M   
Sbjct: 168 ILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGA 227

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            V  D+  YT+L+    R G ++E + +  +M  +G +P+ +    ++      G++DEA
Sbjct: 228 IVP-DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEA 286

Query: 240 IELQNEMMGRGLL 252
           +EL+  M  +GLL
Sbjct: 287 LELKRSMANKGLL 299


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 128/249 (51%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G N   ++  Y TII GLC     + ++ +L  M + G+  + V  +T++D   KA    
Sbjct: 192 GGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVD 251

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A  +L  M+D  ++  VVT+  +IDGLCK+  V  A      M D G+ P+V  Y  +I
Sbjct: 252 RAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTII 311

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK   ++RA  +   M  +D+ PD   Y  LI GYL    +KE +     M   G+D
Sbjct: 312 DGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLD 371

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y+ L+  L + G   EAR +F+ MI +GI P+  +   LL  +  RG + +  +L
Sbjct: 372 PDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDL 431

Query: 243 QNEMMGRGL 251
            + M+  G+
Sbjct: 432 LDLMVANGI 440



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 117/240 (48%), Gaps = 3/240 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENG---LTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           T++ GLC E + E++  LL  M E+G    T N V   T++D   KA     A  +L  M
Sbjct: 166 TLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHM 225

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +D  +++ VVT+  +IDGLCK+  V  A      M D G+ P+V  Y  +IDGLCK   +
Sbjct: 226 IDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAV 285

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +RA  +   M  + + PD   Y  +IDG  K ++   A  +   M +  V  D+  Y  L
Sbjct: 286 DRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCL 345

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G    G  +E      EM  RG+ PD +    LL    + G   EA ++   M+ +G+
Sbjct: 346 IHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGI 405



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK ++ +YG ++ G        D   LL  M  NG++ N  I   ++ AY K   
Sbjct: 400 MIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAM 459

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +   M    +   VVT+ +LID LCK G V +A+  F +M + G+ PN  V+ +
Sbjct: 460 IDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNS 519

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC  +  E+A  LF EM  + + P+   +  ++           A  L + M  VG
Sbjct: 520 LVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVG 579

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++ +Y +L+ G    G   EA  L   M+  G+ PD I   +LL+ + + G +D A 
Sbjct: 580 VRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAY 639

Query: 241 ELQNEMMGRGLLSGS 255
            L  EM+ +G+  G+
Sbjct: 640 CLFREMLRKGVTPGA 654



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 108/237 (45%), Gaps = 4/237 (1%)

Query: 19  GLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD---S 74
           GLC   + +++  +LL  M E G   N V C TL+          EAL LL  M +    
Sbjct: 134 GLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGG 193

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
                VVT+  +IDGLCK+  V  A      M D G+  +V  Y+ +IDGLCK   ++RA
Sbjct: 194 NCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRA 253

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             +   M  + + PD   Y  +IDG  K ++   A  +   M + GV  D+  Y +++ G
Sbjct: 254 EGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG 313

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L +   +  A  +   MI + + PD      L+  +   G   E +    EM  RGL
Sbjct: 314 LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGL 370



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K D+  Y TII GLC     + +  +L  M +  +  +      L+  Y   GE
Sbjct: 295 MIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGE 354

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E +  L+EM    ++  VVT+ +L+D LCK+G   EA   F  M   G+ PNV +Y  
Sbjct: 355 WKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGI 414

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   +  I    +L D M    + P+   +  ++  Y K     EA+++ +RM++ G
Sbjct: 415 LLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHG 474

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  L+  L + G + +A + F++MI  G+ P+ ++  SL+         ++A 
Sbjct: 475 LSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAE 534

Query: 241 ELQNEMMGRGL 251
           EL  EM  +G+
Sbjct: 535 ELFFEMWDQGV 545



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 113/241 (46%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++ ++++GLC   ++E ++ L  EM + G+  N V   T+M      G+   A  L+D M
Sbjct: 516 VFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               +   V+++  LI G C +G   EA      M   GL P++  Y  L+ G CK   I
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A  LF EM ++ + P    Y+ ++ G      F EA  L   M + G   D+  Y  +
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNII 695

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL +   + EA  +F  +  + + P+ I    ++   ++ G   +A++L   +   GL
Sbjct: 696 LNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGL 755

Query: 252 L 252
           +
Sbjct: 756 V 756



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 120/255 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K D+  Y TII GLC     + ++ +L  M + G+  + V   T++D   KA  
Sbjct: 260 MIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 319

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +L  M+D  ++  + T+  LI G   +G  +E +     M   GL P+V  Y+ 
Sbjct: 320 VDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSL 379

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK      AR +F  M ++ + P+ T Y  L+ GY    +  +  +L + M   G
Sbjct: 380 LLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANG 439

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   +  ++   ++   + EA  +F  M   G+ PD +    L+    + G +D+A+
Sbjct: 440 ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAV 499

Query: 241 ELQNEMMGRGLLSGS 255
              N+M+  G+   S
Sbjct: 500 LKFNQMINDGVTPNS 514



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K D+  Y TII GLC     + ++ +L  M + G+  + V   T++D   KA  
Sbjct: 225 MIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +L  M+D  ++  VVT+  +IDGLCK+  V  A      M D  + P++  Y  
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G       +      +EM  R + PD   Y+ L+D   K+    EA  +   M   G
Sbjct: 345 LIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKG 404

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y  L+ G +  G + +   L   M+  GI P+  +   +L  + ++  +DEA+
Sbjct: 405 IKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAM 464

Query: 241 ELQNEMMGRGL 251
            + + M   GL
Sbjct: 465 HIFSRMSQHGL 475



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 114/239 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ ++  Y T+I G C+  + +++  LL  M   GL  + +   TL+  Y K G 
Sbjct: 575 MERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGR 634

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EML   +    VT+  ++ GL  +    EA + +  M   G   ++  Y  
Sbjct: 635 IDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNI 694

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK NC++ A  +F  +  +D+ P+   +T +ID   K    K+A++L   +   G
Sbjct: 695 ILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHG 754

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           +  ++  Y  ++  + + G L E   LF  M   G  PD ++  ++++    RG +  A
Sbjct: 755 LVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRA 813



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 117/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y  ++  LC   K  +++ +   M   G+  N  I   L+  Y   G 
Sbjct: 365 MYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGA 424

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++   LLD M+ + I      F +++    K  ++ EA+  F RM   GL P+V  Y  
Sbjct: 425 IADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGI 484

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++ A   F++M    + P++  + +L+ G    + +++A  L   M + G
Sbjct: 485 LIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  + +++  L   G +  A+ L   M   G+ P+ I   +L+  H   G  DEA 
Sbjct: 545 VRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAA 604

Query: 241 ELQNEMMGRGL 251
           +L + M+  GL
Sbjct: 605 QLLDVMVSVGL 615



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 91/207 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +      Y TI+ GL    +F ++K L   M ++G   +      +++   K   
Sbjct: 645 MLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNC 704

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +   +    +   ++TF ++ID L K G  ++A+D F  +P  GL PNV  Y  
Sbjct: 705 VDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCI 764

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  + ++  ++   NLF  M K    PD+    A+I   L       A    +++ E+ 
Sbjct: 765 MMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMN 824

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVL 207
             L+ +  + L+   SR  +   A+ L
Sbjct: 825 FSLEASTTSLLISLFSREEYKNHAKSL 851



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/271 (20%), Positives = 108/271 (39%), Gaps = 45/271 (16%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKA--GEPSE-ALSLLDEM---LDSRIEVT 79
            +D+  L  E+  +   A+      L++   +A     SE A+SL + M     +++   
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNL-- 137
           + T+ +L    C+ G +      FG +   G   N  V   L++GLC    ++ A ++  
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 138 -----FDEMP---------------KR-----------------DMIPDTTAYTALIDGY 160
                F  MP               KR                 +  P+   Y  +IDG 
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K ++   A  +   M + GV LD+  Y++++ GL +   +  A  +   MI +G+ PD 
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   +++    +   +D A  +   M+ +G+
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV 300



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 75/167 (44%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  I+ GLC  +  +++  +   +    L  N +  T ++D  FK G   +A+ L 
Sbjct: 688 DIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLF 747

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    +   VVT+C+++  + + GL+ E  + F  M   G  P+  +  A+I  L  +
Sbjct: 748 ASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGR 807

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             I RA     ++ + +   + +  + LI  + + E    A +L  +
Sbjct: 808 GEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSLPEK 854


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 127/242 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + IK D   Y  II GLC +   +++  L +EM+  G  A+ +I TTL+  +  AG 
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   LL +M+  +I   VV F  LID   K G +REA +    M   G+ P+   YT+
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+N +++A ++ D M  +   P+   +  LI+GY K     + L L  +M+  G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y +L+ G    G L+ A+ LF EM+ R + PD +    LL    + G  ++A+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477

Query: 241 EL 242
           E+
Sbjct: 478 EI 479



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 2/250 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K  L     ++ GLC+  K  D+ LL+  M E G   N V    ++    K+G+ + A+ 
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M + +I++  V + ++IDGLCK G +  A + F  M   G   ++ +YT LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    L  +M KR + PD  A++ALID ++K    +EA  L   M + G+  D  
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM-DEAIELQNE 245
            YTSL+ G  +   L +A  +   M+ +G  P+ I   ++L   Y + N+ D+ +EL  +
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN-IRTFNILINGYCKANLIDDGLELFRK 412

Query: 246 MMGRGLLSGS 255
           M  RG+++ +
Sbjct: 413 MSLRGVVADT 422



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 106/212 (50%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   +TV  +TL++     G  SEAL L+D M++   + T++T   L++GLC +G V +A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    RM + G  PN   Y  ++  +CK      A  L  +M +R +  D   Y+ +IDG
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K  S   A NL N M   G   D+  YT+L+ G    G   +   L  +MI R I PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   +L+    + G + EA EL  EM+ RG+
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348



 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 128/252 (50%), Gaps = 4/252 (1%)

Query: 3   GKNIK----ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
           GK IK     D   + T+I GLC+E +  ++  L+  M E G     +    L++     
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ S+A+ L+D M+++  +   VT+  ++  +CKSG    A++   +M +  +  +   Y
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +IDGLCK   ++ A NLF+EM  +    D   YT LI G+     + +   L   M +
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             +  D+ A+++L+    + G L+EA  L  EMI RGI PD +   SL+    +   +D+
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370

Query: 239 AIELQNEMMGRG 250
           A  + + M+ +G
Sbjct: 371 ANHMLDLMVSKG 382



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 105/211 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  KAD+ +Y T+I G C   +++D   LL +M +  +T + V  + L+D + K G+
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM+   I    VT+  LIDG CK   + +A      M   G  PN+  +  
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK N I+    LF +M  R ++ DT  Y  LI G+ +    + A  L   M    
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           V  D+ +Y  L+ GL   G  ++A  +F ++
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 114/219 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  +  +I     E K  +++ L  EM + G++ +TV  T+L+D + K  +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +LD M+       + TF +LI+G CK+ L+ + ++ F +M   G+  +   Y  
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   +E A+ LF EM  R + PD  +Y  L+DG   +   ++AL +  ++ +  
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           ++LD+  Y  ++ G+     + +A  LF  +  +G+ PD
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 111/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I G C E++ + +  +L  M   G   N      L++ Y KA  
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L L  +M    +    VT+  LI G C+ G +  A + F  M    + P++  Y  
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC     E+A  +F+++ K  M  D   Y  +I G        +A +L   +   G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y  ++ GL + G L EA +LF +M   G  P+      L++ H   G+  ++ 
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582

Query: 241 ELQNEM 246
           +L  E+
Sbjct: 583 KLIEEI 588



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 1/204 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + AD   Y T+I G C   K E +K L  EM    +  + V    L+D     GE
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P +AL + +++  S++E+ +  + ++I G+C +  V +A D F  +P  G+ P+V  Y  
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCKK  +  A  LF +M +    P+   Y  LI  +L      ++  L   +   G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
             +D +    +V  LS  G L+++
Sbjct: 593 FSVDASTVKMVVDMLSD-GRLKKS 615



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 96/230 (41%)

Query: 22  IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV 81
           ++ K +D+  L  EM  +      +  + L     +  +    L L  +M    I   + 
Sbjct: 49  VDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLY 108

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           T  ++I+  C+   +  A    G++   G  P+   ++ LI+GLC +  +  A  L D M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            +    P      AL++G   +    +A+ L +RM E G   +   Y  ++  + + G  
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             A  L  +M  R I  D +    ++    + G++D A  L NEM  +G 
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278



 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 49/98 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K D+  Y  +I GLC +    ++ LL  +M+E+G + N      L+ A+   G+ ++
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           +  L++E+      V   T  +++D L    L +  +D
Sbjct: 581 SAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLD 618


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 127/242 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + IK D   Y  II GLC +   +++  L +EM+  G  A+ +I TTL+  +  AG 
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   LL +M+  +I   VV F  LID   K G +REA +    M   G+ P+   YT+
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+N +++A ++ D M  +   P+   +  LI+GY K     + L L  +M+  G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y +L+ G    G L+ A+ LF EM+ R + PD +    LL    + G  ++A+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477

Query: 241 EL 242
           E+
Sbjct: 478 EI 479



 Score =  131 bits (329), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 2/250 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K  L     ++ GLC+  K  D+ LL+  M E G   N V    ++    K+G+ + A+ 
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M + +I++  V + ++IDGLCK G +  A + F  M   G   ++ +YT LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    L  +M KR + PD  A++ALID ++K    +EA  L   M + G+  D  
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM-DEAIELQNE 245
            YTSL+ G  +   L +A  +   M+ +G  P+ I   ++L   Y + N+ D+ +EL  +
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN-IRTFNILINGYCKANLIDDGLELFRK 412

Query: 246 MMGRGLLSGS 255
           M  RG+++ +
Sbjct: 413 MSLRGVVADT 422



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 106/212 (50%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   +TV  +TL++     G  SEAL L+D M++   + T++T   L++GLC +G V +A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    RM + G  PN   Y  ++  +CK      A  L  +M +R +  D   Y+ +IDG
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K  S   A NL N M   G   D+  YT+L+ G    G   +   L  +MI R I PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   +L+    + G + EA EL  EM+ RG+
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 128/252 (50%), Gaps = 4/252 (1%)

Query: 3   GKNIK----ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
           GK IK     D   + T+I GLC+E +  ++  L+  M E G     +    L++     
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ S+A+ L+D M+++  +   VT+  ++  +CKSG    A++   +M +  +  +   Y
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +IDGLCK   ++ A NLF+EM  +    D   YT LI G+     + +   L   M +
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             +  D+ A+++L+    + G L+EA  L  EMI RGI PD +   SL+    +   +D+
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370

Query: 239 AIELQNEMMGRG 250
           A  + + M+ +G
Sbjct: 371 ANHMLDLMVSKG 382



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 105/211 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  KAD+ +Y T+I G C   +++D   LL +M +  +T + V  + L+D + K G+
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM+   I    VT+  LIDG CK   + +A      M   G  PN+  +  
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK N I+    LF +M  R ++ DT  Y  LI G+ +    + A  L   M    
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           V  D+ +Y  L+ GL   G  ++A  +F ++
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 114/219 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  +  +I     E K  +++ L  EM + G++ +TV  T+L+D + K  +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +LD M+       + TF +LI+G CK+ L+ + ++ F +M   G+  +   Y  
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   +E A+ LF EM  R + PD  +Y  L+DG   +   ++AL +  ++ +  
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           ++LD+  Y  ++ G+     + +A  LF  +  +G+ PD
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 123/274 (44%), Gaps = 24/274 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + AD   Y T+I G C   K E +K L  EM    +  + V    L+D     GE
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P +AL + +++  S++E+ +  + ++I G+C +  V +A D F  +P  G+ P+V  Y  
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH----------------- 163
           +I GLCKK  +  A  LF +M +    P+   Y  LI  +L                   
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592

Query: 164 -----ESFKEALNLKNRMTEVGVDLDLNAYTSLV--WGLSRCGHLQEARVLFHEMIGRGI 216
                 + + AL+   RM + G + D+  +T+L+  + L     + +A  LF  M   G 
Sbjct: 593 FSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGY 652

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            P+ +   +++K       + +   + ++M  RG
Sbjct: 653 KPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERG 686



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 111/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I G C E++ + +  +L  M   G   N      L++ Y KA  
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L L  +M    +    VT+  LI G C+ G +  A + F  M    + P++  Y  
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC     E+A  +F+++ K  M  D   Y  +I G        +A +L   +   G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y  ++ GL + G L EA +LF +M   G  P+      L++ H   G+  ++ 
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582

Query: 241 ELQNEM 246
           +L  E+
Sbjct: 583 KLIEEI 588



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 22/250 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  +  +I G C  +  +D   L  +M   G+ A+TV   TL+  + + G+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EM+  R+   +V++ +L+DGLC +G   +A++ F ++    +  ++ +Y  
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G+C  + ++ A +LF  +P + + PD   Y  +I G  K  S  EA  L  +M E G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557

Query: 181 VDLDLNAYTSLVWG----------------LSRCGHLQEARVL------FHEMIGRGILP 218
              +   Y  L+                  + RCG   +A  L         M+  G  P
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEP 617

Query: 219 DEILCISLLK 228
           D     +LL+
Sbjct: 618 DVFTFTTLLR 627



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 24/197 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K D+  Y  +I GLC +    ++ LL  +M+E+G + N      L+ A+   G+ ++
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580

Query: 64  ----------------------ALSLLDEMLDSRIEVTVVTFCVLIDGLC--KSGLVREA 99
                                 ALS L  ML +  E  V TF  L+   C  ++  V +A
Sbjct: 581 SAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDA 640

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
              F  M   G  PNV  Y  +I GL   N I +   + D+M +R   P+    +  I G
Sbjct: 641 PTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISG 700

Query: 160 YLKHESFKEALNLKNRM 176
             K +    A+ L  +M
Sbjct: 701 LCKQDLHGSAILLLRKM 717



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 96/230 (41%)

Query: 22  IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV 81
           ++ K +D+  L  EM  +      +  + L     +  +    L L  +M    I   + 
Sbjct: 49  VDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLY 108

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           T  ++I+  C+   +  A    G++   G  P+   ++ LI+GLC +  +  A  L D M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            +    P      AL++G   +    +A+ L +RM E G   +   Y  ++  + + G  
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             A  L  +M  R I  D +    ++    + G++D A  L NEM  +G 
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 133/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I A +  Y  +I  L +E + E+++ ++ EM+E G+  + V     ++ Y + G 
Sbjct: 348 MMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGN 407

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +ALSL DEM++  I  TV T+  LID   K   + EA + F +    G+ P++ ++ A
Sbjct: 408 AKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNA 467

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    I+RA  L  EM    ++PD   +  L+ GY +    +EA  L + M E G
Sbjct: 468 LIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG 527

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D  +Y +L+ G S+ G +++A  +F EM+  G  P  +   +L++ + + G  D A 
Sbjct: 528 IKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAE 587

Query: 241 ELQNEMMGRGL 251
           EL  EM  +G+
Sbjct: 588 ELLREMQSKGI 598



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 135/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK KN+K D   Y + I  LC E + E++  +L ++ E+GL  N V    L+D     G+
Sbjct: 278 MKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGD 337

Query: 61  PSEALSLLDEM--------------------LDSRIEVT---------------VVTFCV 85
             +A +  DEM                    L+ RIE                 VVT+ +
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
            I+G C+ G  ++A+  F  M +  + P V  YT+LID   K+N +  A   F +  K  
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           M+PD   + ALIDG+  + +   A  L   M    V  D   + +L+ G  R   ++EA+
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAK 517

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L  EM  RGI PD I   +L+  + +RG+M +A+E+ +EM+  G 
Sbjct: 518 KLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGF 563



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 122/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K ++  Y T+I G C+  KFE +  +   MK+  L  +     + +    K   
Sbjct: 243 MEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERR 302

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L ++L+S +    VT+  LIDG C  G + +A  Y   M + G+  +V  Y  
Sbjct: 303 IEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNL 362

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L  +  IE A ++  EM ++ + PD   Y   I+GY +  + K+AL+L + M E  
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  YTSL+    +   + EA   F + I  G+LPD I+  +L+  H   GN+D A 
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAF 482

Query: 241 ELQNEM 246
           +L  EM
Sbjct: 483 QLLKEM 488



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 118/248 (47%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           NIK+ +  +  +I  LC E K++ +K  +  M+  G+  N V   T+++ Y   G+   A
Sbjct: 212 NIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAA 271

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             +   M D  ++    T+   I  LCK   + EA     ++ + GL PN   Y ALIDG
Sbjct: 272 SKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDG 331

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            C K  +++A    DEM  R ++     Y  LI      +  +EA ++   M E GV+ D
Sbjct: 332 CCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPD 391

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y   + G  RCG+ ++A  LF EM+ + I P      SL+    +R  M EA E   
Sbjct: 392 VVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFK 451

Query: 245 EMMGRGLL 252
           + +  G+L
Sbjct: 452 KSIKEGML 459



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 122/247 (49%), Gaps = 1/247 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+K  L ++  ++   C   K +++   L+ MKEN +   T  C +L+    K  +   A
Sbjct: 143 NVKTTL-VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMA 201

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             + +EM+   I+ ++VTF ++I+ LC+ G  ++A D+ G M  +G+ PNV  Y  +I+G
Sbjct: 202 WFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVING 261

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            C +   E A  +F  M  +++ PD   Y + I    K    +EA  +  ++ E G+  +
Sbjct: 262 YCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPN 321

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y +L+ G    G L +A     EM+ RGI+        L+   +    ++EA ++  
Sbjct: 322 AVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIK 381

Query: 245 EMMGRGL 251
           EM  +G+
Sbjct: 382 EMREKGV 388



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 73/152 (48%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
            D+ ++  +I G C+    + +  LL EM    +  + V   TLM  Y +  +  EA  L
Sbjct: 460 PDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKL 519

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           LDEM +  I+   +++  LI G  K G +++A++ F  M   G  P +  Y ALI G  K
Sbjct: 520 LDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSK 579

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
               + A  L  EM  + + PD + Y  +I+ 
Sbjct: 580 IGEADHAEELLREMQSKGITPDDSTYLYVIEA 611



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 64/125 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   + T++ G C E K E++K LL EMKE G+  + +   TL+  Y K G+
Sbjct: 488 MDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGD 547

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + DEML    + T++T+  LI G  K G    A +    M   G+ P+ + Y  
Sbjct: 548 MKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLY 607

Query: 121 LIDGL 125
           +I+ +
Sbjct: 608 VIEAM 612



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 102/210 (48%)

Query: 45  TVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG 104
           T++   L+ AY +  +P EAL  L+ M ++ I     T   L+  L K   ++ A   + 
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            M    +  ++  +  +I+ LC++   ++A++    M    + P+   Y  +I+GY    
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
            F+ A  +   M +  +  D   Y S +  L +   ++EA  +  +++  G++P+ +   
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           +L+     +G++D+A   ++EMM RG+++ 
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVAS 356


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 124/242 (51%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +IK ++ +Y  II GL  + +  D+  L +EM+E G+  +      ++D +  +G  SEA
Sbjct: 244 HIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEA 303

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             LL EML+ +I   VVT+  LI+   K     EA + +  M   G+ PN   Y ++IDG
Sbjct: 304 QRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDG 363

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK+N ++ A ++F  M  +   PD   +  LIDGY   +   +   L + MTE G+  D
Sbjct: 364 FCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVAD 423

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y +L+ G    G L  A  L  +MI  G+ PD + C +LL    + G + +A+E+  
Sbjct: 424 TTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK 483

Query: 245 EM 246
            M
Sbjct: 484 AM 485



 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  + T+I G C   + +D   LL EM E GL A+T    TL+  +   G+
Sbjct: 380 MATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGD 439

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDF 109
            + AL L  +M+ S +   +VT   L+DGLC +G +++A++ F  M           P  
Sbjct: 440 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFN 499

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L+ EMP R ++P+T  Y+++I+G  K     EA
Sbjct: 500 GVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEA 559

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             + + M       D+  + +LV G  + G + +   LF EM  RGI+ D I  I+L+  
Sbjct: 560 TQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHG 619

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ A+++  EM+  G+
Sbjct: 620 FRKVGNINGALDIFQEMISSGV 641



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 11/257 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    + AD   Y T+I G C+      +  L  +M  +G+  + V C TL+D     G+
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 474

Query: 61  PSEALSLLDEMLDSR-----------IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
             +AL +   M  S+           +E  V T+ +LI GL   G   EA + +  MP  
Sbjct: 475 LKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHR 534

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ PN   Y+++I+GLCK++ ++ A  +FD M  +   PD   +  L+ GY K     + 
Sbjct: 535 GIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDG 594

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           L L   M   G+  D   Y +L+ G  + G++  A  +F EMI  G+ PD I   S+L  
Sbjct: 595 LELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTV 654

Query: 230 HYERGNMDEAIELQNEM 246
            + +  +  A+ +  ++
Sbjct: 655 LWSKEELKRAVAMLEDL 671



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 128/248 (51%), Gaps = 1/248 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + T++ GLC E +  ++  LL  M E+GL  N +   T++D   K G+   AL+
Sbjct: 175 RPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALN 234

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I+  VV +  +IDGL K G   +A + +  M + G+ P++  Y  +IDG 
Sbjct: 235 LLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGF 294

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A+ L  EM +R + P+   Y+ALI+ Y+K   F EA  L + M   G+  + 
Sbjct: 295 CSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNT 354

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y S++ G  +   L  A  +F+ M  +G  PD     +L+  +     +D+  EL +E
Sbjct: 355 ITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHE 414

Query: 246 MMGRGLLS 253
           M   GL++
Sbjct: 415 MTETGLVA 422



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 5/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  D+  +  +I   C  SK   +     ++ + G   + V  +TL+        
Sbjct: 103 MERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDR 162

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL L  +M        VVTF  L++GLC+ G V EA+    RM + GL PN   Y  
Sbjct: 163 VSEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 218

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++DG+CK      A NL  +M +   I P+   Y+A+IDG  K     +A NL   M E 
Sbjct: 219 IVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEK 278

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  DL  Y  ++ G    G   EA+ L  EM+ R I P+ +   +L+  + +     EA
Sbjct: 279 GIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEA 338

Query: 240 IELQNEMMGRGLLSGS 255
            EL +EM+ RG++  +
Sbjct: 339 EELYDEMLPRGIIPNT 354



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 120/266 (45%), Gaps = 11/266 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  DL  Y  +I G C   ++ +++ LL EM E  +  N V  + L++AY K  +
Sbjct: 275 MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERK 334

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I    +T+  +IDG CK   +  A   F  M   G  P+V  +  
Sbjct: 335 FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNT 394

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    I+    L  EM +  ++ DTT Y  LI G+        AL+L  +M   G
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG-----------RGILPDEILCISLLKK 229
           V  D+    +L+ GL   G L++A  +F  M              G+ PD      L+  
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISG 514

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGS 255
               G   EA EL  EM  RG++  +
Sbjct: 515 LINEGKFLEAEELYKEMPHRGIVPNT 540



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 121/240 (50%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           YGTI+ G+C       +  LL +M+E + +  N VI + ++D  +K G  S+A +L  EM
Sbjct: 216 YGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEM 275

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +  I   + T+  +IDG C SG   EA      M +  ++PNV  Y+ALI+   K+   
Sbjct: 276 QEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKF 335

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  L+DEM  R +IP+T  Y ++IDG+ K      A ++   M   G   D+  + +L
Sbjct: 336 FEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTL 395

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G      + +   L HEM   G++ D     +L+      G+++ A++L  +M+  G+
Sbjct: 396 IDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGV 455



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 11/252 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C +++ + ++ +   M   G + +     TL+D Y  A    +   LL EM 
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMT 416

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ +     T+  LI G C  G +  A+D   +M   G+ P++     L+DGLC    ++
Sbjct: 417 ETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 476

Query: 133 RARNLFDEMPKRDMI-----------PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            A  +F  M K  M            PD   Y  LI G +    F EA  L   M   G+
Sbjct: 477 DALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGI 536

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             +   Y+S++ GL +   L EA  +F  M  +   PD +   +L+  + + G +D+ +E
Sbjct: 537 VPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLE 596

Query: 242 LQNEMMGRGLLS 253
           L  EM  RG+++
Sbjct: 597 LFCEMGRRGIVA 608



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 5/228 (2%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
            ED+  L S+M  +    + +    LM    +   P   +SL  +M   +I   V +F +
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI   C    +  A+  FG++   G  P+V  ++ L+ GLC ++ +  A +LF +M +  
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR-- 175

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   +T L++G  +     EA+ L +RM E G+  +   Y ++V G+ + G    A 
Sbjct: 176 --PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 206 VLFHEMIGRG-ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L  +M     I P+ ++  +++   ++ G   +A  L  EM  +G+ 
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIF 281


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 133/291 (45%), Gaps = 35/291 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     D+  Y T++ GLC + +  D++ LL+EM+E G+T +    TTL+  Y + G 
Sbjct: 358 MVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGN 417

Query: 61  PSEALSLLDEMLDSRIEVTVVTF-----------------------------------CV 85
              AL L D +L  R+   VVT+                                    +
Sbjct: 418 FENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSI 477

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LID  C+ G V +A  +   M   G  PN+  Y ++I G C+   +++ +    +M + +
Sbjct: 478 LIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDN 537

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   +  LI GY+K E+   A N+ N M +  V  D   Y  ++ G S  G++Q+A 
Sbjct: 538 VFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAG 597

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
            +F  M   GI PD    +SL+  H   GN  +A +L +EM+ RG     K
Sbjct: 598 RVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 130/248 (52%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  +  +I G C   + +++     EM+   +T + V  + L+  + + GE   A
Sbjct: 257 SVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHA 316

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
            + L EM    +    V + ++I G C++G + EA+     M  FG  P+V  Y  L++G
Sbjct: 317 GAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNG 376

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK++ +  A  L +EM +R + PD   +T LI GY +  +F+ AL L + +    +  D
Sbjct: 377 LCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPD 436

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y SL+ G+ R G L +A  L+ +M  R ILP+ I    L+  H E+G +++A    +
Sbjct: 437 VVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLD 496

Query: 245 EMMGRGLL 252
           EM+ +G L
Sbjct: 497 EMVKKGNL 504



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 120/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K  +  Y +++ GLC   +F+ +K +   M +  +  +      L+  + + GE
Sbjct: 218 MANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGE 277

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+    EM    +   VV+F  LI    + G +  A  Y   M   GL P+  +YT 
Sbjct: 278 VKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTM 337

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   +  A  + DEM     +PD   Y  L++G  K     +A  L N M E G
Sbjct: 338 VIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG 397

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  DL  +T+L+ G  R G+ + A  LF  ++ + + PD +   SL+     +G++ +A 
Sbjct: 398 VTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKAN 457

Query: 241 ELQNEMMGRGLL 252
           EL ++M  R +L
Sbjct: 458 ELWDDMHAREIL 469



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 119/246 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG  +  D  +Y  +I G C      ++  +  EM   G   + V   TL++   K   
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHR 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL+EM +  +   + TF  LI G C+ G    A+  F  +    L P+V  Y +
Sbjct: 383 LLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNS 442

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG+C+K  + +A  L+D+M  R+++P+   Y+ LID + +    ++A    + M + G
Sbjct: 443 LIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKG 502

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y S++ G  R G++++ +    +M    + PD I   +L+  + +  NM  A 
Sbjct: 503 NLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAF 562

Query: 241 ELQNEM 246
            + N M
Sbjct: 563 NVFNIM 568



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 120/236 (50%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++   C   +F+ +  ++SEM++  +  + V    L+DA F+AG+   A++L+D M +  
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG 222

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++  +VT+  ++ GLCK     +A + F  M    + P+V  +  LI G C+   ++ A 
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAV 282

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
             + EM  R + PD  +++ LI  + +      A      M  +G+  D   YT ++ G 
Sbjct: 283 KFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGF 342

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            R G + EA  +  EM+G G LPD +   +LL    ++  + +A +L NEM  RG+
Sbjct: 343 CRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGV 398



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 111/226 (49%), Gaps = 4/226 (1%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E  +L+LS   E     N      ++ +Y K  E   A +++ EM    +   VVT  VL
Sbjct: 143 EAYRLVLSSDSE----VNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVL 198

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           ID   ++G V  AI     M + GL P +  Y +++ GLCK    ++A+ +F  M +  +
Sbjct: 199 IDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSV 258

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            PD  ++  LI G+ +    KEA+     M    V  D+ +++ L+   SR G +  A  
Sbjct: 259 APDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGA 318

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              EM G G++PD ++   ++      G+M EA+ +++EM+G G L
Sbjct: 319 YLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCL 364



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 98/256 (38%), Gaps = 35/256 (13%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI--------------- 76
           ++S +  +  T    +   L+  Y ++ +P EA      +LD R+               
Sbjct: 74  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLS 133

Query: 77  --------------------EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
                               EV   T  +++   CK+     A      M    + P+V 
Sbjct: 134 RAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV 193

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +  LID   +   ++ A  L D M  R + P    Y +++ G  KH  F +A  +   M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM 253

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            +  V  D+ ++  L+ G  R G ++EA   + EM  R + PD +    L+     RG M
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEM 313

Query: 237 DEAIELQNEMMGRGLL 252
           D A     EM G GL+
Sbjct: 314 DHAGAYLREMKGLGLV 329



 Score = 38.5 bits (88), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 182 DLDLNAYTSLVWGLSRCGHLQ--EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           D ++NAYT  +   S C  L+   A  +  EM  R + PD +    L+   +  G++D A
Sbjct: 152 DSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAA 211

Query: 240 IELQNEMMGRGLLSG 254
           I L + M  RGL  G
Sbjct: 212 IALVDSMANRGLKPG 226


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK       +  Y TII G C   K   +  LL EM    +  N +    L+D + +   
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDEN 314

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  + +EM    ++  VVT+  LI+GLC +G + EA+    +M   GL PNV  Y A
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CKK  ++ AR + D++ KR + P+   +  LID Y K     +A  L++ M + G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +++ Y  L+ G  R G+++EAR L  EM G G+  D +    L+    ++G   +A+
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494

Query: 241 ELQNEMMGRGL 251
            L +EM   GL
Sbjct: 495 RLLDEMFEVGL 505



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 121/234 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  +K ++  Y  +I G C +   ++++ +L ++ + GL  N +   TL+DAY KAG 
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L   MLD+ +   V T+  LI G C+ G V+EA      M   GL  ++  Y  
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCKK    +A  L DEM +  + P    Y ALIDGY +  +   ALN++  M + G
Sbjct: 480 LVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKG 539

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
              ++  Y  L+ G    G L+EA  L +EM+ +G++P+      L  +  E+G
Sbjct: 540 RRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 117/217 (53%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           EM    +  N V    +++   K G+  +A  ++++M       +V+T+  +IDG CK+G
Sbjct: 219 EMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAG 278

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + +A      M    +HPN   +  LIDG C+   +  A+ +F+EM ++ + P+   Y 
Sbjct: 279 KMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYN 338

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +LI+G   +    EAL L+++M+ +G+  ++  Y +L+ G  +   L+EAR +  ++  R
Sbjct: 339 SLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR 398

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G+ P+ I   +L+  + + G MD+A  L++ M+  G+
Sbjct: 399 GLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 117/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  +   +  +I G C +     +K +  EM+  GL  N V   +L++     G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L D+M    ++  VVT+  LI+G CK  +++EA +    +   GL PNV  +  
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K   ++ A  L   M    + P+ + Y  LI G+ +  + KEA  L   M   G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y  LV  L + G  ++A  L  EM   G+ P  +   +L+  ++  GN   A+
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529

Query: 241 ELQNEMMGRG 250
            ++  M  +G
Sbjct: 530 NVRTLMEKKG 539



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 97/209 (46%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           AN++I   L+ AY K GE   AL   D   D    ++ ++   ++  L K G +      
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M    +  NV  +  +I+GLCK    ++A ++ ++M      P    Y  +IDGY K
Sbjct: 217 YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                +A  L   M    +  +   +  L+ G  R  ++  A+ +F EM  +G+ P+ + 
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             SL+      G +DEA+ LQ++M G GL
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGL 365



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 74/165 (44%), Gaps = 23/165 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G  +KADL  Y  ++  LC + +   +  LL EM E GL  + +    L+D YF+ G 
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGN 524

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + AL++   M        +VT+ VLI G C  G + EA      M + GL PN   Y  
Sbjct: 525 STAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI 584

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
                           L DEM ++  IPD       IDG+L + S
Sbjct: 585 ----------------LRDEMMEKGFIPD-------IDGHLYNVS 606


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  138 bits (347), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 130/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D   Y T+I G C E  F  + ++ +EM  +GL+ + +  T+L+ +  KAG 
Sbjct: 301 MNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGN 360

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A   LD+M    +     T+  L+DG  + G + EA      M D G  P+V  Y A
Sbjct: 361 MNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNA 420

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C    +  A  + ++M ++ + PD  +Y+ ++ G+ +     EAL +K +M   G
Sbjct: 421 LINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG 480

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y+SL+ G       +EA  LF EM+  G+ PDE    +L+  +   G++ +AI
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAI 540

Query: 241 ELQNEMMGRGLL 252
           +L NEM+ +G+L
Sbjct: 541 QLHNEMVEKGVL 552



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 114/209 (54%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I  +C       +   L +M+  GL  N    TTL+D + + G  +EA  +L EM+
Sbjct: 348 YTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMI 407

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+    +VVT+  LI+G C +G + +AI     M + GL P+V  Y+ ++ G C+   ++
Sbjct: 408 DNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVD 467

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +  +M  + + PDT  Y++LI G+ +    KEA +L + M  VG+  D   YT+L+
Sbjct: 468 EALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALI 527

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEI 221
                 G LQ+A  L +EM+ +G+LPD +
Sbjct: 528 NAYCMEGDLQKAIQLHNEMVEKGVLPDVV 556



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 15/255 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G CI  K  D+  +L +MKE GLT + V  +T++  + ++ +  EAL +  +M+
Sbjct: 418 YNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMV 477

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+   +T+  LI G C+    +EA D F  M   GL P+   YTALI+  C +  ++
Sbjct: 478 AKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQ 537

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL---------------KNRMT 177
           +A  L +EM ++ ++PD   Y+ LI+G  K    +EA  L                + + 
Sbjct: 538 KAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLI 597

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E   +++  +  SL+ G    G + EA  +F  M+ +   PD      ++  H   G++ 
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIR 657

Query: 238 EAIELQNEMMGRGLL 252
           +A  L  EM+  G L
Sbjct: 658 KAYSLYKEMVKSGFL 672



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 130/253 (51%), Gaps = 15/253 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G   +    ++  +L EM +NG + + V    L++ +  AG+  +A+++L++M 
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMK 442

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   VV++  ++ G C+S  V EA+    +M   G+ P+   Y++LI G C++   +
Sbjct: 443 EKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTK 502

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +LFDEM +  + PD   YTALI+ Y      ++A+ L N M E GV  D+  Y+ L+
Sbjct: 503 EACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEIL---------------CISLLKKHYERGNMD 237
            GL++    +EA+ L  ++     +P ++                 +SL+K    +G M 
Sbjct: 563 NGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622

Query: 238 EAIELQNEMMGRG 250
           EA ++   M+ + 
Sbjct: 623 EADQVFESMLEKN 635



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    ++  Y T+I G C   K +D   LL  M   GL  N +    +++   + G 
Sbjct: 231 MEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGR 290

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   +L EM      +  VT+  LI G CK G   +A+     M   GL P+V  YT+
Sbjct: 291 MKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTS 350

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  +CK   + RA    D+M  R + P+   YT L+DG+ +     EA  +   M + G
Sbjct: 351 LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  Y +L+ G    G + +A  +  +M  +G+ PD +   ++L       ++DEA+
Sbjct: 411 FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEAL 470

Query: 241 ELQNEMMGRGL 251
            ++ +M+ +G+
Sbjct: 471 RVKRKMVAKGI 481



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 1/216 (0%)

Query: 37  KENGLTANTVICTTLMDAYFKAGEP-SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           + +G     +    ++DA  ++    S A ++  EML S++   V T+ +LI G C +G 
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGN 220

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           +  A+ +F RM   G  PNV  Y  LIDG CK   I+    L   M  + + P+  +Y  
Sbjct: 221 LDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNV 280

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +I+G  +    KE   +   M + G  LD   Y +L+ G  + G+  +A V+  EM+  G
Sbjct: 281 VINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + P  I   SL+    + GNM+ A E  ++M  RGL
Sbjct: 341 LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGL 376



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y  +I G C+    + +      M++ G   N V   TL+D Y K  +
Sbjct: 196 MLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRK 255

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   LL  M    +E  ++++ V+I+GLC+ G ++E       M   G   +   Y  
Sbjct: 256 IDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNT 315

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+    +A  +  EM +  + P    YT+LI    K  +   A    ++M   G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+LV G S+ G++ EA  +  EMI  G  P  +   +L+  H   G M +AI
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAI 435

Query: 241 ELQNEMMGRGL 251
            +  +M  +GL
Sbjct: 436 AVLEDMKEKGL 446



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 103/220 (46%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  EM ++ ++ N      L+  +  AG    AL   D M        VVT+  LIDG C
Sbjct: 192 VFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYC 251

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K   + +  +    M   GL PN+  Y  +I+GLC++  ++    +  EM KR    D  
Sbjct: 252 KLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEV 311

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  LI GY K  +F +AL +   M   G+   +  YTSL+  + + G++  A     +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM 371

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             RG+ P+E    +L+    ++G M+EA  +  EM+  G 
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGF 411



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 15/253 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +  D+  Y T++ G C     +++  +  +M   G+  +T+  ++L+  + +   
Sbjct: 441 MKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRR 500

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   +     T+  LI+  C  G +++AI     M + G+ P+V  Y+ 
Sbjct: 501 TKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSV 560

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY---------------TALIDGYLKHES 165
           LI+GL K+     A+ L  ++   + +P    Y                +LI G+     
Sbjct: 561 LINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGM 620

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             EA  +   M E     D  AY  ++ G  R G +++A  L+ EM+  G L   +  I+
Sbjct: 621 MTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIA 680

Query: 226 LLKKHYERGNMDE 238
           L+K  ++ G ++E
Sbjct: 681 LVKTLHKEGKVNE 693



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 36/209 (17%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK-KNCIERARNL 137
           T   F +++    +  L+ +A+         G  P V  Y A++D   + K  I  A N+
Sbjct: 133 TSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 138 -----------------------------------FDEMPKRDMIPDTTAYTALIDGYLK 162
                                              FD M K+  +P+   Y  LIDGY K
Sbjct: 193 FKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCK 252

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                +   L   M   G++ +L +Y  ++ GL R G ++E   +  EM  RG   DE+ 
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+K + + GN  +A+ +  EM+  GL
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGL 341


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 147/288 (51%), Gaps = 36/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
           M   NI+ +  +Y TII GLC   +   ++ LL+ M +E  L  + +   +++D +FK G
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           E   A++  +EM  + I   V+T+  L++GLCK+  + +A++    M + G+  ++  Y 
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ALIDG CK++ +E A  LF E+ +  + P    Y +LI G+    +   AL+L  +M + 
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI--------------- 224
           G+  DL  YT+L+ GL + G+L  A  L+ EM   G++PDEI+                 
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778

Query: 225 --------------------SLLKKHYERGNMDEAIELQNEMMGRGLL 252
                               +++  HY  GN+DEA  L +EM+ +G+L
Sbjct: 779 VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 132/252 (52%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  ++  Y  ++ G C +   + ++++ S + E GL  N    + L+D  F+  +
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
              AL +++ M  S IEV  V +  +I+GLCK G   +A +    M  +  L  +   Y 
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++IDG  K+  ++ A   ++EM    + P+   YT+L++G  K+    +AL +++ M   
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV LD+ AY +L+ G  +  +++ A  LF E++  G+ P + +  SL+      GNM  A
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708

Query: 240 IELQNEMMGRGL 251
           ++L  +M+  GL
Sbjct: 709 LDLYKKMLKDGL 720



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 2/205 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +K D+P YG +I G C  S  E +  L SE+ E GL  +  I  +L+  +   G 
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L  +ML   +   + T+  LIDGL K G +  A + +  M   GL P+  +YT 
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GL KK    +   +F+EM K ++ P+   Y A+I G+ +  +  EA  L + M + G
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEAR 205
           +  D   +  LV G  + G+LQ  R
Sbjct: 825 ILPDGATFDILVSG--QVGNLQPVR 847



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 12/218 (5%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           GLT +     T++  + K  +  EAL L DE  ++ +   V     ++  LCK G   EA
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEA 462

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
            +   +M   G+ PNV  Y  ++ G C++  ++ AR +F  + ++ + P+   Y+ LIDG
Sbjct: 463 TELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             ++   + AL + N MT   ++++   Y +++ GL + G   +AR L   MI      +
Sbjct: 523 CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI-----EE 577

Query: 220 EILCI------SLLKKHYERGNMDEAIELQNEMMGRGL 251
           + LC+      S++   ++ G MD A+    EM G G+
Sbjct: 578 KRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 108/219 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  ++  Y +++ GLC  ++ + +  +  EMK  G+  +      L+D + K   
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L  E+L+  +  +   +  LI G    G +  A+D + +M   GL  ++  YT 
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGL K   +  A  L+ EM    ++PD   YT +++G  K   F + + +   M +  
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  ++  Y +++ G  R G+L EA  L  EM+ +GILPD
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 828



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 2/249 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGL-TANTVICTTLMDAYFKAGEPS 62
           +  + D  LY   +   C       +  LL EMKE  L   +    T+++ A  K G   
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L DEML   I + VV    LI G CK+  +  A+  F +M   G  PN   ++ LI
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +   K   +E+A   + +M    + P       +I G+LK +  +EAL L +   E G+ 
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
                 T L W L + G   EA  L  +M  RGI P+ +   +++  H  + NMD A  +
Sbjct: 442 NVFVCNTILSW-LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500

Query: 243 QNEMMGRGL 251
            + ++ +GL
Sbjct: 501 FSNILEKGL 509



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 37/278 (13%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
            P     +  L   +   ++K L S M   G+  + V    LM A  +  +P+EAL +L 
Sbjct: 198 FPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLS 257

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKS-------GLVRE------------------------ 98
             ++   E   + + + +   CK+        L+RE                        
Sbjct: 258 RAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317

Query: 99  -----AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
                AI     M   G+  NV   T+LI G CK N +  A  LFD+M K    P++  +
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF 377

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           + LI+ + K+   ++AL    +M  +G+   +    +++ G  +    +EA  LF E   
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G L +  +C ++L    ++G  DEA EL ++M  RG+
Sbjct: 438 TG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 36/256 (14%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD------------------ 73
           L+   K  G   N+     L++AY K  +   A+ ++++ML+                  
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209

Query: 74  SRIEVT--------VVTFCVLIDGLCKSGLVR---------EAIDYFGRMPDFGLHPNVA 116
            R  +T        +V   V  D +    L+R         EA++   R  + G  P+  
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSL 269

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDM-IPDTTAYTALIDGYLKHESFKEALNLKNR 175
           +Y+  +   CK   +  A +L  EM ++ + +P    YT++I   +K  +  +A+ LK+ 
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDE 329

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           M   G+ +++ A TSL+ G  +   L  A VLF +M   G  P+ +    L++   + G 
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389

Query: 236 MDEAIELQNEMMGRGL 251
           M++A+E   +M   GL
Sbjct: 390 MEKALEFYKKMEVLGL 405



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 22/263 (8%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDS-------KLLLSEMKENGLTANTVICTTLMDA 54
           +  N +A L  Y    W       FED         +L+S  +  G  ++ +I       
Sbjct: 82  RRNNPEAALRFYN---WARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLI------R 132

Query: 55  YFKAGEPSEALSLL-DEMLDSR----IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           Y     P+   S+L  +++DS      EV    F  L++   K      A+D   +M + 
Sbjct: 133 YVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLEL 192

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
            + P        +  L ++N +  A+ L+  M    +  D      L+   L+ E   EA
Sbjct: 193 DVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEA 252

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI-LPDEILCISLLK 228
           L + +R  E G + D   Y+  V    +   L  A  L  EM  + + +P +    S++ 
Sbjct: 253 LEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVIL 312

Query: 229 KHYERGNMDEAIELQNEMMGRGL 251
              ++GNMD+AI L++EM+  G+
Sbjct: 313 ASVKQGNMDDAIRLKDEMLSDGI 335


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 127/245 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+  Y ++I+G   +     +  +L +M+  G   N    T L+D + K G+  EA 
Sbjct: 379 IVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 438

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +LL+EM    ++   V F  LI   CK   + EA++ F  MP  G  P+V  + +LI GL
Sbjct: 439 NLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 498

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+ + I+ A  L  +M    ++ +T  Y  LI+ +L+    KEA  L N M   G  LD 
Sbjct: 499 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDE 558

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL+ GL R G + +AR LF +M+  G++P  I C  L+      G ++EA+E Q E
Sbjct: 559 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKE 618

Query: 246 MMGRG 250
           M+ RG
Sbjct: 619 MVLRG 623



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 114/220 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  + ++I GLC   + + +  LL +M   G+ ANTV   TL++A+ + GE
Sbjct: 479 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 538

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L++EM+     +  +T+  LI GLC++G V +A   F +M   GL P+      
Sbjct: 539 IKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNI 598

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC+   +E A     EM  R   PD   + +LI+G  +    ++ L +  ++   G
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  D   Y +L+  L + G + +A +L  E I  G +P++
Sbjct: 659 IPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPND 698



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 5/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I   L  +G ++  LC  ++ + +  +L +M ++G   N+VI  TL+ +  K   
Sbjct: 202 MLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNR 261

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL LL+EM          TF  +I GLCK   + EA     RM   G  P+   Y  
Sbjct: 262 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGY 321

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN-LKNRMTEV 179
           L++GLCK   ++ A++LF  +PK    P +  +  LI G++ H    +A   L + +T  
Sbjct: 322 LMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 377

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D+  Y SL++G  + G +  A  +  +M  +G  P+      L+    + G +DEA
Sbjct: 378 GIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 437

Query: 240 IELQNEMMGRGL 251
             L NEM   GL
Sbjct: 438 YNLLNEMSADGL 449



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 35/291 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K ++  Y  ++ G C   K +++  LL+EM  +GL  NTV    L+ A+ K   
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM     +  V TF  LI GLC+   ++ A+     M   G+  N   Y  
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           LI+                                   GLC+   +++AR+LF++M +  
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P + +   LI+G  +    +EA+  +  M   G   D+  + SL+ GL R G +++  
Sbjct: 589 LVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 648

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
            +F ++   GI PD +   +L+    + G + +A  L +E +  G +   +
Sbjct: 649 TMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDR 699



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 1/240 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  +    +Y  +I  L    +F+    LL +MK+ G+     +  ++M  Y KAG P +
Sbjct: 99  KGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQ 158

Query: 64  ALSLLDEMLDS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
              L+ EM +    E T  ++ V+++ L      + A + F  M    + P +  +  ++
Sbjct: 159 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 218

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
             LC  N ++ A ++  +M K   +P++  Y  LI    K     EAL L   M  +G  
Sbjct: 219 KALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 278

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   +  ++ GL +   + EA  + + M+ RG  PD+I    L+    + G +D A +L
Sbjct: 279 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDL 338



 Score = 45.1 bits (105), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 53/118 (44%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I GLC     E++     EM   G T + V   +L++   +AG   + L++  ++    
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 658

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
           I    VT+  L+  LCK G V +A        + G  PN   ++ L+  L  +  ++R
Sbjct: 659 IPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 134/254 (52%), Gaps = 3/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFK--- 57
           M  + I  +L  + T+I GLC   K   +  ++ +MK  G   N V   TL+D Y K   
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            G+  +A ++L EM+++++    VTF VLIDG CK   +  A+  F  M   GL P V  
Sbjct: 281 VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y +L++GLC +  +  A+ L DEM   ++ P+   Y ALI+GY K +  +EA  L + + 
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           + G+  ++  + +L+ G  + G ++EA +L   M+ +G LP+      L+      G M+
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460

Query: 238 EAIELQNEMMGRGL 251
           E   L NEM  RG+
Sbjct: 461 EVKNLLNEMQCRGV 474



 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 124/242 (51%), Gaps = 3/242 (1%)

Query: 13  YGTIIWGLCI---ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           Y T+I G C      K   +  +L EM EN ++ N+V    L+D + K    S AL + +
Sbjct: 268 YNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFE 327

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM    ++ TVVT+  L++GLC  G + EA      M    L PNV  Y ALI+G CKK 
Sbjct: 328 EMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKK 387

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +E AR LFD + K+ + P+   +  L+ GY K    +EA  L+  M E G   + + Y 
Sbjct: 388 LLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYN 447

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+ G  R G ++E + L +EM  RG+  D +    L+    E+    +A  L +EM+ +
Sbjct: 448 CLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDK 507

Query: 250 GL 251
           GL
Sbjct: 508 GL 509



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 125/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +K  +  Y +++ GLC E K  ++K+LL EM  + L  N +    L++ Y K   
Sbjct: 329 MQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKL 388

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D +    +   V+TF  L+ G CK G + EA      M + G  PN + Y  
Sbjct: 389 LEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNC 448

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C++  +E  +NL +EM  R +  DT  Y  LI  + + +  K+A  L + M + G
Sbjct: 449 LIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKG 508

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y  L+ G    G+L+ A  L  +M   G   + +    L++ +  +G +++A 
Sbjct: 509 LKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDAN 568

Query: 241 ELQNEMMGRGLL 252
            L NEM+ +GL+
Sbjct: 569 GLLNEMLEKGLI 580



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 114/238 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C +     +  +  EM+  GL    V   +L++     G+ +EA  LLDEML
Sbjct: 306 FNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEML 365

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S ++  V+T+  LI+G CK  L+ EA + F  +   GL PNV  +  L+ G CK   +E
Sbjct: 366 SSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKME 425

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M ++  +P+ + Y  LI G+ +    +E  NL N M   GV  D   Y  L+
Sbjct: 426 EAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILI 485

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
                    ++A  L  EM+ +G+ P  +    LL  +   GN+  A+ L+ +M   G
Sbjct: 486 SAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 108/219 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+K ++  Y  +I G C +   E+++ L   + + GLT N +   TL+  Y K G+
Sbjct: 364 MLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGK 423

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L   ML+        T+  LI G C+ G + E  +    M   G+  +   Y  
Sbjct: 424 MEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNI 483

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C+K   ++A  L DEM  + + P    Y  L++GY    + + ALNL+ +M + G
Sbjct: 484 LISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEG 543

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              ++  Y  L+ G  R G L++A  L +EM+ +G++P+
Sbjct: 544 RWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPN 582



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 3/207 (1%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  L+ A  K  E      +  EM+  +I   ++TF  +I+GLCK G + +A D    M 
Sbjct: 198 CNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMK 257

Query: 108 DFGLHPNVAVYTALIDGLCKKNCI---ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            +G  PNV  Y  LIDG CK   +    +A  +  EM +  + P++  +  LIDG+ K E
Sbjct: 258 VWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDE 317

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
           +   AL +   M   G+   +  Y SLV GL   G L EA+VL  EM+   + P+ I   
Sbjct: 318 NLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYN 377

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L+  + ++  ++EA EL + +  +GL
Sbjct: 378 ALINGYCKKKLLEEARELFDNIGKQGL 404



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 19  GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
            L  E++F   + +  EM    ++ N +   T+++   K G+ ++A  ++D+M       
Sbjct: 204 ALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWP 263

Query: 79  TVVTFCVLIDGLCKSGLV---REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
            VVT+  LIDG CK G V    +A      M +  + PN   +  LIDG CK   +  A 
Sbjct: 264 NVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAAL 323

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            +F+EM  + + P    Y +L++G        EA  L + M    +  ++  Y +L+ G 
Sbjct: 324 KVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGY 383

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            +   L+EAR LF  +  +G+ P+ I   +LL  + + G M+EA  LQ  M+ +G L  +
Sbjct: 384 CKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNA 443


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 135/252 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+AD+ +Y +II   C     + + +L  EM + GL  +      L+    KAG+
Sbjct: 325 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQ 384

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L++EM    I++  V F  LIDG C+SG+V EA+     M   GL  +V  Y +
Sbjct: 385 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 444

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +  GLCK N  + A+ L   M +R + P+T ++T LID Y K  +F EA  +   M E G
Sbjct: 445 IASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 504

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y  L+ G S+ G+++EA  L  E+  RG++PD   C SL+      G +D A+
Sbjct: 505 NVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMAL 564

Query: 241 ELQNEMMGRGLL 252
           +L +EM  RGL+
Sbjct: 565 KLFDEMPQRGLV 576



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +      YG +I G+C   + E +++L++EM+  G+  N VI  TL+D Y ++G 
Sbjct: 360 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 419

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L   M    +E  V  +  +  GLCK     EA      M + G+ PN   +T 
Sbjct: 420 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 479

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK+     A+ +F EM ++  +P+   Y  LIDGY K  + KEA  LK+ +   G
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+   TSL+ G    G +  A  LF EM  RG++P+ +   +++    + G  +EA 
Sbjct: 540 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 599

Query: 241 ELQNEMMGRGL 251
           +L +EM   GL
Sbjct: 600 KLYDEMKETGL 610



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 124/248 (50%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K +KA++  Y   I G            +L+ M++ G+  N V  T L+  +   G+  
Sbjct: 257 AKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIE 316

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA  L +EM +  IE  V  +  +I   C+SG V+ A+  F  M D GL P+   Y ALI
Sbjct: 317 EAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALI 376

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G+CK   +E A+ L +EM  + +  +   +  LIDGY +     EAL L+  M + G++
Sbjct: 377 HGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLE 436

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ AY S+  GL +     EA+ L   M+ RG+ P+ +   +L+  + + GN  EA  +
Sbjct: 437 SDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRV 496

Query: 243 QNEMMGRG 250
             EM  +G
Sbjct: 497 FREMEEKG 504



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 110/195 (56%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +++D+  Y +I  GLC  ++ +++K LL  M E G++ NT+  TTL+D Y K G 
Sbjct: 430 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 489

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +  EM +      ++T+ VLIDG  K G ++EA      + + GL P+V   T+
Sbjct: 490 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 549

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    ++ A  LFDEMP+R ++P+   YTA+I G  K    +EA  L + M E G
Sbjct: 550 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETG 609

Query: 181 VDLDLNAYTSLVWGL 195
           +  D   Y+SLV  L
Sbjct: 610 LTPDDTVYSSLVGSL 624



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 130/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  ++  Y  +I G     K E+++ L  EM+E G+ A+  + T+++    ++G 
Sbjct: 290 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 349

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L DEM D  +  +  T+  LI G+CK+G +  A      M   G+  N  ++  
Sbjct: 350 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 409

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C+   ++ A  L   M K+ +  D  AY ++  G  K     EA  L   M E G
Sbjct: 410 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 469

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +  ++T+L+    + G+  EA+ +F EM  +G +P+ I    L+  + +RGNM EA 
Sbjct: 470 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 529

Query: 241 ELQNEMMGRGLL 252
           +L++E+  RGL+
Sbjct: 530 KLKDELENRGLI 541



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 35/256 (13%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
              M++ G   +   C   + A  + G+    L     M++  +EVTV +  +++DGLCK
Sbjct: 182 FEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCK 241

Query: 93  SGLV---REAID--------------------YFGR------------MPDFGLHPNVAV 117
            G V   R+ +D                    YF R            M   G+  NV  
Sbjct: 242 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVT 301

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           YT LI G      IE A+ LF+EM ++ +  D   YT++I    +  + K AL L + MT
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 361

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           + G+    + Y +L+ G+ + G ++ A++L +EM G+GI  + ++  +L+  + E G +D
Sbjct: 362 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 421

Query: 238 EAIELQNEMMGRGLLS 253
           EA+ LQ  M  +GL S
Sbjct: 422 EALRLQVVMEKKGLES 437



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL   + M      +   +  V +  L + G V   + +F RM +  +   V   T ++
Sbjct: 177 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVL 236

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK+  +E  R L DE+  + +  +   Y A I+GY K         +   M + GV 
Sbjct: 237 DGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVA 296

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  YT L+ G S  G ++EA+ LF EM  +GI  D  +  S++  +   GN+  A+ L
Sbjct: 297 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 356

Query: 243 QNEMMGRGLLSGS 255
            +EM  +GL+  +
Sbjct: 357 FDEMTDKGLIPSA 369


>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+     +  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 300 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 359

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 360 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 419

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   ++ A  LF+EM ++    D+  Y ALID + KH    EA+ L  RM  E 
Sbjct: 420 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 479

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G D  +  YT L+ G+ +    +EA  L+  MI +GI P      +L       G +  A
Sbjct: 480 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 539

Query: 240 IELQNEMMGRGLL 252
            ++ +E+   G++
Sbjct: 540 CKILDELAPMGVI 552



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 119/246 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   IK D+  Y T+I G C   + + +   L +M+  G  A+ +   T++ A +   +
Sbjct: 230 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD 289

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT 
Sbjct: 290 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 349

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +E A  L   M      PD   Y+ +++G  K+   +EAL+  +     G
Sbjct: 350 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 409

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + ++   Y+SL+ GL + G + EA  LF EM  +G   D     +L+    +   +DEAI
Sbjct: 410 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 469

Query: 241 ELQNEM 246
            L   M
Sbjct: 470 ALFKRM 475



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           MK   I+  L  Y  ++ GL + + F DS   + E+ E+G +  + V   T++  Y KAG
Sbjct: 195 MKENGIEPTLYTYNFLMNGL-VSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 253

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  +A+  L +M     E   +T+  +I            +  +  M + G+      ++
Sbjct: 254 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS 313

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I GLCK+  +     +F+ M ++   P+   YT LIDGY K  S ++A+ L +RM + 
Sbjct: 314 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 373

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  Y+ +V GL + G ++EA   FH     G+  + +   SL+    + G +DEA
Sbjct: 374 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 433

Query: 240 IELQNEMMGRG 250
             L  EM  +G
Sbjct: 434 ERLFEEMSEKG 444



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 112/250 (44%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K K    +L  Y +++  L +    +  + + SE+K+            L+ ++ K G  
Sbjct: 126 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMV 185

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            E L +  +M ++ IE T+ T+  L++GL  +  V  A   F  M    + P++  Y  +
Sbjct: 186 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 245

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I G CK    ++A     +M  R    D   Y  +I        F   + L   M E G+
Sbjct: 246 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 305

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            +  +A++ ++ GL + G L E   +F  MI +G  P+  +   L+  + + G++++AI 
Sbjct: 306 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 365

Query: 242 LQNEMMGRGL 251
           L + M+  G 
Sbjct: 366 LLHRMIDEGF 375



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 2/205 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            Y ++I GL    + ++++ L  EM E G T ++     L+DA+ K  +  EA++L   M
Sbjct: 416 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 475

Query: 72  LDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
            +    + TV T+ +L+ G+ K     EA+  +  M D G+ P  A + AL  GLC    
Sbjct: 476 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 535

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           + RA  + DE+    +I D  A   +I+   K    KEA  L + +TE G ++     T 
Sbjct: 536 VARACKILDELAPMGVILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTV 594

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRG 215
           ++  L + G    A  L H  IG G
Sbjct: 595 MINALRKVGKADLAMKLMHSKIGIG 619



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 91/207 (43%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +MKENG+         LM+    A     A  + + M   RI+  +VT+  +I G CK+G
Sbjct: 194 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 253

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
             ++A++    M   G   +   Y  +I      +       L+ EM ++ +     A++
Sbjct: 254 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS 313

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +I G  K     E   +   M   G   ++  YT L+ G ++ G +++A  L H MI  
Sbjct: 314 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 373

Query: 215 GILPDEILCISLLKKHYERGNMDEAIE 241
           G  PD +    ++    + G ++EA++
Sbjct: 374 GFKPDVVTYSVVVNGLCKNGRVEEALD 400


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 134/244 (54%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K ++ +L  +  II GLC + + +++  +L EM   G   + V   TL++ Y K G   +
Sbjct: 47  KGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQ 106

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L  EM+ + +   VVT+  LI+ +CK+G +  A+++F +M   GL PN   YT +I+
Sbjct: 107 ALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIIN 166

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G  ++  ++ A  + +EM +   IP    Y ALI+G+      +EA+ L   M   GV  
Sbjct: 167 GFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLP 226

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+ +Y++++ G +R   L  A  +  EMIG+ +LPD +   SL++   E+  + EA ++ 
Sbjct: 227 DVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMF 286

Query: 244 NEMM 247
            EM+
Sbjct: 287 QEML 290



 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 129/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y T++ G C E  F  + +L +EM  NGL+ N V  T+L+++  KAG 
Sbjct: 79  MSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGN 138

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+   D+M    +     T+  +I+G  + GL+ EA      M   G  P++  Y A
Sbjct: 139 LNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNA 198

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C    +E A  L  +M  + ++PD  +Y+ +I G+ +++    A  +K  M    
Sbjct: 199 LINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKS 258

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y+SL+ GL     L EA  +F EM+   + PDE    +L+  + + G++++A+
Sbjct: 259 VLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKAL 318

Query: 241 ELQNEMMGRGLL 252
            L +EM+ +G L
Sbjct: 319 HLHDEMIQKGFL 330



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 119/240 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + +++   L  M   GL  N +    +++   + G   E   +L EM 
Sbjct: 21  YNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMS 80

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   VT+  L++G CK G   +A+     M   GL PNV  YT+LI+ +CK   + 
Sbjct: 81  RKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLN 140

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA   FD+M  R + P+   YT +I+G+ +     EA  + N MT  G    +  Y +L+
Sbjct: 141 RAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALI 200

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G    G ++EA  L  +M+G+G+LPD +   +++        +D A +++ EM+G+ +L
Sbjct: 201 NGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVL 260



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 15/252 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII G   +   +++  +L+EM  +G   + V    L++ +   G   EA+ LL +M+
Sbjct: 161 YTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMV 220

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   VV++  +I G  ++  +  A      M    + P+   Y++LI GLC++  + 
Sbjct: 221 GKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLT 280

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A ++F EM    + PD   YT LI+ Y K     +AL+L + M + G   D   Y  L+
Sbjct: 281 EACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLI 340

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEIL---------------CISLLKKHYERGNMD 237
            GL++    +EAR L  ++     +P  +                 ++L+K    +G MD
Sbjct: 341 NGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMD 400

Query: 238 EAIELQNEMMGR 249
           EA ++   M+ +
Sbjct: 401 EADQVFESMINK 412



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 23/274 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK++  D   Y ++I GLC + +  ++  +  EM    L  +    TTL++AY K G+
Sbjct: 254 MIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGD 313

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-- 118
            ++AL L DEM+        VT+ VLI+GL K    +EA     ++      P+   Y  
Sbjct: 314 LNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNT 373

Query: 119 -------------TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
                         AL+ G C K  ++ A  +F+ M  ++  P+   Y  +I G+ +  +
Sbjct: 374 LIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGN 433

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI----LPDEI 221
             +A  L   M    V +D   +T  V  L +    +      +E+IG  +    L D  
Sbjct: 434 VLKAYKLYKEM----VHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAE 489

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           L   L++ + + GNMD    L  EM   GL+  +
Sbjct: 490 LSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPST 523



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 106/247 (42%), Gaps = 20/247 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  Y TII G     + + +  +  EM    +  + V  ++L+    +   
Sbjct: 219 MVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRR 278

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  +  EML  ++     T+  LI+  CK G + +A+     M   G  P+   Y  
Sbjct: 279 LTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNV 338

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GL K+   + AR L  ++   D IP    Y  LI+     E FK A+          
Sbjct: 339 LINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIE-FKSAV---------- 387

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                    +LV G    G + EA  +F  MI +   P+E +   ++  H   GN+ +A 
Sbjct: 388 ---------ALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAY 438

Query: 241 ELQNEMM 247
           +L  EM+
Sbjct: 439 KLYKEMV 445



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 35/189 (18%)

Query: 99  AIDYFGRMPDFGLHPNVAVYTALID----------------------------------- 123
            + +F  M   G  PNV  Y  +ID                                   
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC+   ++    +  EM ++  +PD   Y  L++GY K  +F +AL L   M   G+  
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  YTSL+  + + G+L  A   F +M  RG+ P+E    +++    ++G +DEA  + 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 244 NEMMGRGLL 252
           NEM   G +
Sbjct: 182 NEMTRSGFI 190


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  137 bits (346), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 134/262 (51%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  + T+I G C   + +D   LL EM   GL ANTV   TL+  +   G+
Sbjct: 386 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDF 109
            + AL L  +M+ S +   +VT   L+DGLC +G +++A++ F  M           P  
Sbjct: 446 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 505

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y+++IDG  K     EA
Sbjct: 506 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             +   M       ++  + +L+ G  + G + +   LF EM  RGI+ D I+ I+L+  
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ A+++  EM+  G+
Sbjct: 626 FRKVGNINGALDIFQEMISSGV 647



 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 126/256 (49%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  +  +I   C  SK   +     ++ + GL  + V  TTL+        
Sbjct: 105 MERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDR 164

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL    +M ++     VVTF  L++GLC+ G + EA+    RM + GL P    Y  
Sbjct: 165 VSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGT 224

Query: 121 LIDGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++DG+CKK     A NL  +M +   +IP+   Y+A+ID   K     +A NL   M E 
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  DL  Y S++ G    G   +A  L  EM+ R I PD +   +L+    + G   EA
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEA 344

Query: 240 IELQNEMMGRGLLSGS 255
            EL +EM+ RG++  +
Sbjct: 345 AELYDEMLPRGIIPNT 360



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 125/243 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            +I  ++ +Y  II  LC + +  D++ L +EM+E G+  +     +++  +  +G  S+
Sbjct: 249 SHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSD 308

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EML+ +I   VVT+  LI+   K G   EA + +  M   G+ PN   Y ++ID
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMID 368

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK++ ++ A ++F  M  +   PD   +T LIDGY   +   + + L + M   G+  
Sbjct: 369 GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 428

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y +L+ G    G L  A  L  +MI  G+ PD + C +LL    + G + +A+E+ 
Sbjct: 429 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 488

Query: 244 NEM 246
             M
Sbjct: 489 KAM 491



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 125/263 (47%), Gaps = 11/263 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  DL  Y ++I G C   ++ D++ LL EM E  ++ + V    L++A+ K G+
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I    +T+  +IDG CK   +  A D F  M   G  P+V  +T 
Sbjct: 341 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    I+    L  EMP+R ++ +T  Y  LI G+        AL+L  +M   G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 460

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG-----------RGILPDEILCISLLKK 229
           V  D+    +L+ GL   G L++A  +F  M              G+ PD +    L+  
Sbjct: 461 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 520

Query: 230 HYERGNMDEAIELQNEMMGRGLL 252
               G   EA EL  EM  RG++
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIV 543



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 127/250 (50%), Gaps = 1/250 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + T++ GLC E +  ++  LL  M E+GL    +   T++D   K G+   AL+
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I   VV +  +ID LCK G   +A + F  M + G+ P++  Y ++I G 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGF 300

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  L  EM +R + PD   Y ALI+ ++K   F EA  L + M   G+  + 
Sbjct: 301 CSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 360

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y S++ G  +   L  A  +F+ M  +G  PD     +L+  +     +D+ +EL +E
Sbjct: 361 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 420

Query: 246 MMGRGLLSGS 255
           M  RGL++ +
Sbjct: 421 MPRRGLVANT 430



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 11/257 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + A+   Y T+I G C+      +  L  +M  +G+  + V C TL+D     G+
Sbjct: 421 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 480

Query: 61  PSEALSLLDEMLDSR-----------IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
             +AL +   M  S+           +E  V+T+ +LI GL   G   EA + +  MP  
Sbjct: 481 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 540

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+   Y+++IDGLCK++ ++ A  +F  M  +   P+   +  LI+GY K     + 
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 600

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           L L   M   G+  D   Y +L++G  + G++  A  +F EMI  G+ PD I   ++L  
Sbjct: 601 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 230 HYERGNMDEAIELQNEM 246
            + +  ++ A+ +  ++
Sbjct: 661 FWSKEELERAVAMLEDL 677



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 123/240 (51%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           YGTI+ G+C +     +  LL +M+E + +  N VI + ++D+  K G  S+A +L  EM
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM 281

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +  I   + T+  +I G C SG   +A      M +  + P+V  Y ALI+   K+   
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  L+DEM  R +IP+T  Y ++IDG+ K +    A ++   M   G   D+  +T+L
Sbjct: 342 FEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTL 401

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G      + +   L HEM  RG++ + +   +L+      G+++ A++L  +M+  G+
Sbjct: 402 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 461



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 11/264 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +   Y ++I G C + + + ++ +   M   G + +    TTL+D Y  A  
Sbjct: 351 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL EM    +    VT+  LI G C  G +  A+D   +M   G+ P++     
Sbjct: 411 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 470

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-----------PDTTAYTALIDGYLKHESFKEA 169
           L+DGLC    ++ A  +F  M K  M            PD   Y  LI G +    F EA
Sbjct: 471 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 530

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M   G+  D   Y+S++ GL +   L EA  +F  M  +   P+ +   +L+  
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 590

Query: 230 HYERGNMDEAIELQNEMMGRGLLS 253
           + + G +D+ +EL  EM  RG+++
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVA 614



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 1/227 (0%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           ED+  L S+M  +    + V    LM    +   P   +SL  +M   +I   + +F +L
Sbjct: 61  EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I   C    +  A+  FG++   GLHP+V  +T L+ GLC ++ +  A + F +M +   
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P+   +T L++G  +     EA+ L +RM E G+      Y ++V G+ + G    A  
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240

Query: 207 LFHEMIG-RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           L  +M     I+P+ ++  +++    + G   +A  L  EM  +G+ 
Sbjct: 241 LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 73/156 (46%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + +AID F  M      P+V  +  L+  + +    +   +L+ +M ++ +  D  ++  
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI  +        AL+   ++T++G+  D+  +T+L+ GL     + EA   FH+M    
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             P+ +   +L+      G + EA+ L + MM  GL
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGL 215


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 135/255 (52%), Gaps = 3/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++G ++K D+ +Y TII  LC      D+  + SEM   G++ + V  TTL+  +   G+
Sbjct: 189 LEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGK 248

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG---LVREAIDYFGRMPDFGLHPNVAV 117
             EA SLL+EM    I   V TF VLID L K G   +V EA+  F  M    + P++  
Sbjct: 249 MKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVT 308

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y +LIDGLCK + +ERA  L  EM +  + PD  +YT L+DG  K    + A      + 
Sbjct: 309 YNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLL 368

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
             G  L++  Y  ++ GL + G   EA  L  +M G+G +P+ I   +++    E+   D
Sbjct: 369 VKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDEND 428

Query: 238 EAIELQNEMMGRGLL 252
           +A ++  EM+ RGLL
Sbjct: 429 KAEKILREMIARGLL 443



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 132/250 (52%), Gaps = 11/250 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   + +    LL +++ + +  + V+  T++++  K     +A  +  EM+
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 225

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL---CKKN 129
              I   VVT+  LI G C  G ++EA      M    ++P+V  ++ LID L    KK 
Sbjct: 226 VKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKK 285

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++ A +LF+EM  ++MIPD   Y +LIDG  K+   + A+ L   M E G+  D+ +YT
Sbjct: 286 MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYT 345

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRG----ILPDEILCISLLKKHYERGNMDEAIELQNE 245
            L+ GL + G L+ A+  F  ++ +G    + P  ++   L K     G   EA++L+++
Sbjct: 346 ILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKA----GLFGEAMDLKSK 401

Query: 246 MMGRGLLSGS 255
           M G+G +  +
Sbjct: 402 MEGKGCMPNA 411



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 3/249 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  DL     +I   C ++    +  + + + + G   + +   TL+      GE  + L
Sbjct: 89  ITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTL 148

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              D+++    ++  V++  LI+GLCK+G  +       ++    + P+V +Y  +I+ L
Sbjct: 149 YFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSL 208

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +  A +++ EM  + + PD   YT LI G+      KEA +L N M    ++ D+
Sbjct: 209 CKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDV 268

Query: 186 NAYTSLVWGLSRCGH---LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             ++ L+  L + G    + EA  LF EM  + ++PD +   SL+    +  +++ AI L
Sbjct: 269 YTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIAL 328

Query: 243 QNEMMGRGL 251
             EM   G+
Sbjct: 329 LKEMKEHGI 337



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 3/244 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           L+  I+  L    ++     L  + + NG+T +    + L++ +      + A S+   +
Sbjct: 60  LFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANI 119

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L        +T   LI GLC  G +++ + +  ++   G   +   Y  LI+GLCK    
Sbjct: 120 LKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGET 179

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +    L  ++    + PD   Y  +I+   K++   +A ++ + M   G+  D+  YT+L
Sbjct: 180 KAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTL 239

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEI---LCISLLKKHYERGNMDEAIELQNEMMG 248
           + G    G ++EA  L +EM  + I PD     + I  L K  ++  +DEA+ L  EM  
Sbjct: 240 IHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKH 299

Query: 249 RGLL 252
           + ++
Sbjct: 300 KNMI 303



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 86/202 (42%)

Query: 45  TVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG 104
           T +   ++ +  K       +SL  +   + I   + T  +LI+  C    +  A   F 
Sbjct: 58  TFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFA 117

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            +   G HP+      LI GLC +  I++     D++  +    D  +Y  LI+G  K  
Sbjct: 118 NILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAG 177

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             K    L  ++    V  D+  Y +++  L +   L +A  ++ EMI +GI PD +   
Sbjct: 178 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYT 237

Query: 225 SLLKKHYERGNMDEAIELQNEM 246
           +L+      G M EA  L NEM
Sbjct: 238 TLIHGFCIMGKMKEAFSLLNEM 259



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 84/189 (44%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A++  + ML  R       F  ++  L K+      I  F +    G+ P++   + LI
Sbjct: 41  HAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 100

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C +  I  A ++F  + KR   PD      LI G       K+ L   +++   G  
Sbjct: 101 NCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQ 160

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD  +Y +L+ GL + G  +    L  ++ G  + PD ++  +++    +   + +A ++
Sbjct: 161 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDV 220

Query: 243 QNEMMGRGL 251
            +EM+ +G+
Sbjct: 221 YSEMIVKGI 229


>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
 gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
 gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+     +  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   ++ A  LF+EM ++    D+  Y ALID + KH    EA+ L  RM  E 
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G D  +  YT L+ G+ +    +EA  L+  MI +GI P      +L       G +  A
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557

Query: 240 IELQNEMMGRGLL 252
            ++ +E+   G++
Sbjct: 558 CKILDELAPMGVI 570



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 119/246 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   IK D+  Y T+I G C   + + +   L +M+  G  A+ +   T++ A +   +
Sbjct: 248 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD 307

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT 
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +E A  L   M      PD   Y+ +++G  K+   +EAL+  +     G
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + ++   Y+SL+ GL + G + EA  LF EM  +G   D     +L+    +   +DEAI
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487

Query: 241 ELQNEM 246
            L   M
Sbjct: 488 ALFKRM 493



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           MK   I+  L  Y  ++ GL + + F DS   + E+ E+G +  + V   T++  Y KAG
Sbjct: 213 MKENGIEPTLYTYNFLMNGL-VSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  +A+  L +M     E   +T+  +I            +  +  M + G+      ++
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS 331

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I GLCK+  +     +F+ M ++   P+   YT LIDGY K  S ++A+ L +RM + 
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  Y+ +V GL + G ++EA   FH     G+  + +   SL+    + G +DEA
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451

Query: 240 IELQNEMMGRG 250
             L  EM  +G
Sbjct: 452 ERLFEEMSEKG 462



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 112/250 (44%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K K    +L  Y +++  L +    +  + + SE+K+            L+ ++ K G  
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMV 203

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            E L +  +M ++ IE T+ T+  L++GL  +  V  A   F  M    + P++  Y  +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I G CK    ++A     +M  R    D   Y  +I        F   + L   M E G+
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            +  +A++ ++ GL + G L E   +F  MI +G  P+  +   L+  + + G++++AI 
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383

Query: 242 LQNEMMGRGL 251
           L + M+  G 
Sbjct: 384 LLHRMIDEGF 393



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 2/205 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            Y ++I GL    + ++++ L  EM E G T ++     L+DA+ K  +  EA++L   M
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493

Query: 72  LDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
            +    + TV T+ +L+ G+ K     EA+  +  M D G+ P  A + AL  GLC    
Sbjct: 494 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 553

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           + RA  + DE+    +I D  A   +I+   K    KEA  L + +TE G ++     T 
Sbjct: 554 VARACKILDELAPMGVILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTV 612

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRG 215
           ++  L + G    A  L H  IG G
Sbjct: 613 MINALRKVGKADLAMKLMHSKIGIG 637



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 91/207 (43%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +MKENG+         LM+    A     A  + + M   RI+  +VT+  +I G CK+G
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
             ++A++    M   G   +   Y  +I      +       L+ EM ++ +     A++
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS 331

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +I G  K     E   +   M   G   ++  YT L+ G ++ G +++A  L H MI  
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391

Query: 215 GILPDEILCISLLKKHYERGNMDEAIE 241
           G  PD +    ++    + G ++EA++
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALD 418


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 134/262 (51%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  + T+I G C   + +D   LL EM   GL ANTV   TL+  +   G+
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDF 109
            + AL L  +M+ S +   +VT   L+DGLC +G +++A++ F  M           P  
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y+++IDG  K     EA
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             +   M       ++  + +L+ G  + G + +   LF EM  RGI+ D I+ I+L+  
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ A+++  EM+  G+
Sbjct: 624 FRKVGNINGALDIFQEMISSGV 645



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 124/243 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            +IK ++ +Y  II GLC + +  DS  L  EM++ G+  N V    ++  +  +G  S 
Sbjct: 247 SHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSA 306

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EML+ +I   VVT+  LI+   K G   EA + +  M   G+ PN   Y ++ID
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMID 366

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK++ ++ A ++F  M  +   PD   +T LIDGY   +   + + L + M   G+  
Sbjct: 367 GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y +L+ G    G L  A  L  +MI  G+ PD + C +LL    + G + +A+E+ 
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486

Query: 244 NEM 246
             M
Sbjct: 487 KAM 489



 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 129/250 (51%), Gaps = 1/250 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  + T++ GLC E +  ++  LL  M ENGL  + +   T +D   K G+   AL+
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I+  VV +  +IDGLCK G   ++ + F  M D G+ PN+  Y  +I G 
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A+ L  EM +R + P+   Y ALI+ ++K   F EA  L + M   G+  + 
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y S++ G  +   L  A  +F+ M  +G  PD     +L+  +     +D+ +EL +E
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418

Query: 246 MMGRGLLSGS 255
           M  RGL++ +
Sbjct: 419 MPRRGLVANT 428



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 124/263 (47%), Gaps = 11/263 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  ++  Y  +I G CI  ++  ++ LL EM E  ++ N V    L++A+ K G+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I    +T+  +IDG CK   +  A D F  M   G  P+V  +T 
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    I+    L  EMP+R ++ +T  Y  LI G+        AL+L  +M   G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG-----------RGILPDEILCISLLKK 229
           V  D+    +L+ GL   G L++A  +F  M              G+ PD +    L+  
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518

Query: 230 HYERGNMDEAIELQNEMMGRGLL 252
               G   EA EL  EM  RG++
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIV 541



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 11/257 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + A+   Y T+I G C+      +  L  +M  +G+  + V C TL+D     G+
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478

Query: 61  PSEALSLLDEMLDSR-----------IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
             +AL +   M  S+           +E  V+T+ +LI GL   G   EA + +  MP  
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+   Y+++IDGLCK++ ++ A  +F  M  +   P+   +  LI+GY K     + 
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           L L   M   G+  D   Y +L++G  + G++  A  +F EMI  G+ PD I   ++L  
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658

Query: 230 HYERGNMDEAIELQNEM 246
            + +  ++ A+ +  ++
Sbjct: 659 FWSKEELERAVAMLEDL 675



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 5/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  +  +I   C  SK   +     ++ + GL  + V  TTL+        
Sbjct: 107 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR 166

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL L  ++        V+TF  L++GLC+ G V EA+    RM + GL P+   Y  
Sbjct: 167 VSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGT 222

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +DG+CK      A NL  +M +   I P+   Y+A+IDG  K     ++ NL   M + 
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  ++  Y  ++ G    G    A+ L  EM+ R I P+ +   +L+    + G   EA
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342

Query: 240 IELQNEMMGRGLLSGS 255
            EL +EM+ RG++  +
Sbjct: 343 AELYDEMLPRGIIPNT 358



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 11/264 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +   Y ++I G C + + + ++ +   M   G + +    TTL+D Y  A  
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL EM    +    VT+  LI G C  G +  A+D   +M   G+ P++     
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-----------PDTTAYTALIDGYLKHESFKEA 169
           L+DGLC    ++ A  +F  M K  M            PD   Y  LI G +    F EA
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 528

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M   G+  D   Y+S++ GL +   L EA  +F  M  +   P+ +   +L+  
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 588

Query: 230 HYERGNMDEAIELQNEMMGRGLLS 253
           + + G +D+ +EL  EM  RG+++
Sbjct: 589 YCKAGRVDDGLELFCEMGRRGIVA 612



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 67/143 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I GLC +S+ +++  +   M     + N V   TL++ Y KAG 
Sbjct: 535 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGR 594

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L L  EM    I    + +  LI G  K G +  A+D F  M   G++P+      
Sbjct: 595 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRN 654

Query: 121 LIDGLCKKNCIERARNLFDEMPK 143
           ++ G   K  +ERA  + +++ +
Sbjct: 655 MLTGFWSKEELERAVAMLEDLQR 677



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 4/156 (2%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + +AID F  M      P+V  +  L+  + +    +   +L+ +M ++ +  D  ++T 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI  +        AL+   ++T++G+  D+  +T+L+ GL     + EA  LFH++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             PD +   +L+      G + EA+ L + M+  GL
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGL 213


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 127/239 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GLC   +F  +  L  +M   G   +    TT+++   K GE + A  L+ +M 
Sbjct: 164 FTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMG 223

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +  VVT+  LID LCK  LV EA+D F  M   G+ P V  YT+LI GLC  +  +
Sbjct: 224 EVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWK 283

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + +EM   +++PD   ++ LID + K  +  EA  +   MTE+GV+ ++  Y SL+
Sbjct: 284 EASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLM 343

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G S    + EAR LF  MI RG  PD      L+  +     +DEA +L NEM+ +GL
Sbjct: 344 HGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL 402



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 121/245 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y T+I  LC +    ++  + S MK  G++   V  T+L+          EA +
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L+EM    I   +VTF +LID  CK G V EA      M + G+ PNV  Y +L+ G  
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            +  +  AR LFD M  R   PD  +Y+ LI+GY   +   EA  L N M   G+  +  
Sbjct: 348 LQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTV 407

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +YT+L+    + G L+EAR LF +M   G LPD      LL+   ++G + +A  L   M
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAM 467

Query: 247 MGRGL 251
            G  L
Sbjct: 468 QGTYL 472



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I   +  Y ++I GLC  S+++++  +L+EM    +  + V  + L+D + K G 
Sbjct: 257 MKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGN 316

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L  M +  +E  V+T+  L+ G      V EA   F  M   G  P+V  Y+ 
Sbjct: 317 VLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSI 376

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C    I+ A+ LF+EM  + + P+T +YT LI  + +    +EA  L   M   G
Sbjct: 377 LINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNG 436

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y+ L+ G  + G+L +A  LF  M G  + P+ ++   L+    + GN++ A 
Sbjct: 437 YLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHAR 496

Query: 241 ELQNEMMGRGL 251
           +L +E+   GL
Sbjct: 497 KLFSELFVHGL 507



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 113/222 (50%), Gaps = 4/222 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  +I G C+  + +++K L +EM   GLT NTV  TTL+ A+ + G+
Sbjct: 362 MITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGK 421

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  +M  +     + T+ VL++G CK G + +A   F  M    L PN+ +YT 
Sbjct: 422 LREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTI 481

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID +CK   +  AR LF E+    + PD   YT +I+G  K     EAL    +M E G
Sbjct: 482 LIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDG 541

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARV--LFHEMIGRGILPDE 220
              +  +Y  ++ G  +  H  E+R   L  EM  +G + DE
Sbjct: 542 CPPNEFSYNVIIRGFLQ--HKDESRAVQLIGEMRDKGFVADE 581



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 115/246 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   NI  D+  +  +I   C E    +++ +L  M E G+  N +   +LM  Y    E
Sbjct: 292 MTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQME 351

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D M+    +  V ++ +LI+G C    + EA   F  M   GL PN   YT 
Sbjct: 352 VVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTT 411

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C+   +  AR LF +M     +PD   Y+ L++G+ K     +A  L   M    
Sbjct: 412 LIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTY 471

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +L  YT L+  + + G+L  AR LF E+   G+ PD  +  +++    + G +DEA+
Sbjct: 472 LKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEAL 531

Query: 241 ELQNEM 246
           E   +M
Sbjct: 532 EAFRKM 537



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 1/216 (0%)

Query: 25  KFEDSKLLLS-EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           ++ D+ + LS +M+  GL+ NT     L++ +          S+L +++   ++ T++TF
Sbjct: 105 QYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITF 164

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             LI+GLCK+G   +A++ F  M   G  P+V  YT +I+GLCK      A  L  +M +
Sbjct: 165 TTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGE 224

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               PD   Y+ LID   K     EAL++ + M   G+   + +YTSL+ GL      +E
Sbjct: 225 VGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKE 284

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           A  + +EM    I+PD +    L+    + GN+ EA
Sbjct: 285 ASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEA 320



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 119/253 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ ++  Y +++ G  ++ +  +++ L   M   G   +    + L++ Y     
Sbjct: 327 MTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKR 386

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L +EM+   +    V++  LI   C+ G +REA + F  M   G  P++  Y+ 
Sbjct: 387 IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSV 446

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK+  + +A  LF  M    + P+   YT LID   K  +   A  L + +   G
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG 506

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  YT+++ GL + G L EA   F +M   G  P+E     +++   +  +   A+
Sbjct: 507 LQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAV 566

Query: 241 ELQNEMMGRGLLS 253
           +L  EM  +G ++
Sbjct: 567 QLIGEMRDKGFVA 579



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 5/195 (2%)

Query: 52  MDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGL 111
           M  Y+ A      +SL  +M  + +     T  +LI+  C    V        ++   GL
Sbjct: 103 MRQYYDA-----VISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGL 157

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
            P +  +T LI+GLCK     +A  LFD+M  R   PD   YT +I+G  K      A  
Sbjct: 158 QPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAG 217

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
           L  +M EVG   D+  Y++L+  L +   + EA  +F  M  +GI P  +   SL++   
Sbjct: 218 LIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLC 277

Query: 232 ERGNMDEAIELQNEM 246
                 EA  + NEM
Sbjct: 278 SFSRWKEASAMLNEM 292


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 134/262 (51%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  + T+I G C   + +D   LL EM   GL ANTV   TL+  +   G+
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----------PDF 109
            + AL L  +M+ S +   +VT   L+DGLC +G +++A++ F  M           P  
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y+++IDG  K     EA
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             +   M       ++  + +L+ G  + G + +   LF EM  RGI+ D I+ I+L+  
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ A+++  EM+  G+
Sbjct: 624 FRKVGNINGALDIFQEMISSGV 645



 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 124/243 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            +IK ++ +Y  II GLC + +  DS  L  EM++ G+  N V    ++  +  +G  S 
Sbjct: 247 SHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSA 306

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EML+ +I   VVT+  LI+   K G   EA + +  M   G+ PN   Y ++ID
Sbjct: 307 AQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMID 366

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK++ ++ A ++F  M  +   PD   +T LIDGY   +   + + L + M   G+  
Sbjct: 367 GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVA 426

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y +L+ G    G L  A  L  +MI  G+ PD + C +LL    + G + +A+E+ 
Sbjct: 427 NTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 486

Query: 244 NEM 246
             M
Sbjct: 487 KAM 489



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 129/250 (51%), Gaps = 1/250 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  + T++ GLC E +  ++  LL  M ENGL  + +   T +D   K G+   AL+
Sbjct: 179 RPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALN 238

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I+  VV +  +IDGLCK G   ++ + F  M D G+ PN+  Y  +I G 
Sbjct: 239 LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGF 298

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A+ L  EM +R + P+   Y ALI+ ++K   F EA  L + M   G+  + 
Sbjct: 299 CISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNT 358

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y S++ G  +   L  A  +F+ M  +G  PD     +L+  +     +D+ +EL +E
Sbjct: 359 ITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHE 418

Query: 246 MMGRGLLSGS 255
           M  RGL++ +
Sbjct: 419 MPRRGLVANT 428



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 124/263 (47%), Gaps = 11/263 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  ++  Y  +I G CI  ++  ++ LL EM E  ++ N V    L++A+ K G+
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I    +T+  +IDG CK   +  A D F  M   G  P+V  +T 
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    I+    L  EMP+R ++ +T  Y  LI G+        AL+L  +M   G
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG-----------RGILPDEILCISLLKK 229
           V  D+    +L+ GL   G L++A  +F  M              G+ PD +    L+  
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518

Query: 230 HYERGNMDEAIELQNEMMGRGLL 252
               G   EA EL  EM  RG++
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIV 541



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 125/257 (48%), Gaps = 11/257 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + A+   Y T+I G C+      +  L  +M  +G+  + V C TL+D     G+
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478

Query: 61  PSEALSLLDEMLDSR-----------IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
             +AL +   M  S+           +E  V+T+ +LI GL   G   EA + +  MP  
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+   Y+++IDGLCK++ ++ A  +F  M  +   P+   +  LI+GY K     + 
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           L L   M   G+  D   Y +L++G  + G++  A  +F EMI  G+ PD I   ++L  
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658

Query: 230 HYERGNMDEAIELQNEM 246
            + +  ++ A+ +  ++
Sbjct: 659 FWSKEELERAVAMLEDL 675



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 5/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  +  +I   C  SK   +     ++ + GL  + V  TTL+        
Sbjct: 107 MERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHR 166

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL L  ++        V+TF  L++GLC+ G V EA+    RM + GL P+   Y  
Sbjct: 167 VSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGT 222

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +DG+CK      A NL  +M +   I P+   Y+A+IDG  K     ++ NL   M + 
Sbjct: 223 FVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  ++  Y  ++ G    G    A+ L  EM+ R I P+ +   +L+    + G   EA
Sbjct: 283 GIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEA 342

Query: 240 IELQNEMMGRGLLSGS 255
            EL +EM+ RG++  +
Sbjct: 343 AELYDEMLPRGIIPNT 358



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 11/264 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +   Y ++I G C + + + ++ +   M   G + +    TTL+D Y  A  
Sbjct: 349 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 408

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + LL EM    +    VT+  LI G C  G +  A+D   +M   G+ P++     
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-----------PDTTAYTALIDGYLKHESFKEA 169
           L+DGLC    ++ A  +F  M K  M            PD   Y  LI G +    F EA
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 528

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L   M   G+  D   Y+S++ GL +   L EA  +F  M  +   P+ +   +L+  
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 588

Query: 230 HYERGNMDEAIELQNEMMGRGLLS 253
           + + G +D+ +EL  EM  RG+++
Sbjct: 589 YCKAGRVDDGLELFCEMGRRGIVA 612



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 4/156 (2%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + +AID F  M      P+V  +  L+  + +    +   +L+ +M ++ +  D  ++T 
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI  +        AL+   ++T++G+  D+  +T+L+ GL     + EA  LFH++    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI---- 177

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             PD +   +L+      G + EA+ L + M+  GL
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGL 213


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 135/252 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+AD+ +Y +II   C     + + +L  EM + GL  +      L+    KAG+
Sbjct: 321 MREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQ 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L++EM    I++  V F  LIDG C+SG+V EA+     M   GL  +V  Y +
Sbjct: 381 MEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNS 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +  GLCK N  + A+ L   M +R + P+T ++T LID Y K  +F EA  +   M E G
Sbjct: 441 IASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKG 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y  L+ G S+ G+++EA  L  E+  RG++PD   C SL+      G +D A+
Sbjct: 501 NVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMAL 560

Query: 241 ELQNEMMGRGLL 252
           +L +EM  RGL+
Sbjct: 561 KLFDEMPQRGLV 572



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +      YG +I G+C   + E +++L++EM+  G+  N VI  TL+D Y ++G 
Sbjct: 356 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L   M    +E  V  +  +  GLCK     EA      M + G+ PN   +T 
Sbjct: 416 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK+     A+ +F EM ++  +P+   Y  LIDGY K  + KEA  LK+ +   G
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+   TSL+ G    G +  A  LF EM  RG++P+ +   +++    + G  +EA 
Sbjct: 536 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 595

Query: 241 ELQNEMMGRGL 251
           +L +EM   GL
Sbjct: 596 KLYDEMKETGL 606



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 124/248 (50%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K +KA++  Y   I G            +L+ M++ G+  N V  T L+  +   G+  
Sbjct: 253 AKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIE 312

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA  L +EM +  IE  V  +  +I   C+SG V+ A+  F  M D GL P+   Y ALI
Sbjct: 313 EAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALI 372

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G+CK   +E A+ L +EM  + +  +   +  LIDGY +     EAL L+  M + G++
Sbjct: 373 HGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLE 432

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ AY S+  GL +     EA+ L   M+ RG+ P+ +   +L+  + + GN  EA  +
Sbjct: 433 SDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRV 492

Query: 243 QNEMMGRG 250
             EM  +G
Sbjct: 493 FREMEEKG 500



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 110/195 (56%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +++D+  Y +I  GLC  ++ +++K LL  M E G++ NT+  TTL+D Y K G 
Sbjct: 426 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 485

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +  EM +      ++T+ VLIDG  K G ++EA      + + GL P+V   T+
Sbjct: 486 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 545

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    ++ A  LFDEMP+R ++P+   YTA+I G  K    +EA  L + M E G
Sbjct: 546 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETG 605

Query: 181 VDLDLNAYTSLVWGL 195
           +  D   Y+SLV  L
Sbjct: 606 LTPDDTVYSSLVGSL 620



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 130/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  ++  Y  +I G     K E+++ L  EM+E G+ A+  + T+++    ++G 
Sbjct: 286 MEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGN 345

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L DEM D  +  +  T+  LI G+CK+G +  A      M   G+  N  ++  
Sbjct: 346 VKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNT 405

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C+   ++ A  L   M K+ +  D  AY ++  G  K     EA  L   M E G
Sbjct: 406 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERG 465

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +  ++T+L+    + G+  EA+ +F EM  +G +P+ I    L+  + +RGNM EA 
Sbjct: 466 VSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 525

Query: 241 ELQNEMMGRGLL 252
           +L++E+  RGL+
Sbjct: 526 KLKDELENRGLI 537



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 35/256 (13%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
              M++ G   +   C   + A  + G+    L     M++  +EVTV +  +++DGLCK
Sbjct: 178 FEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCK 237

Query: 93  SGLV---REAID--------------------YFGR------------MPDFGLHPNVAV 117
            G V   R+ +D                    YF R            M   G+  NV  
Sbjct: 238 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVT 297

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           YT LI G      IE A+ LF+EM ++ +  D   YT++I    +  + K AL L + MT
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 357

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           + G+    + Y +L+ G+ + G ++ A++L +EM G+GI  + ++  +L+  + E G +D
Sbjct: 358 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVD 417

Query: 238 EAIELQNEMMGRGLLS 253
           EA+ LQ  M  +GL S
Sbjct: 418 EALRLQVVMEKKGLES 433



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL   + M      +   +  V +  L + G V   + +F RM +  +   V   T ++
Sbjct: 173 EALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVL 232

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK+  +E  R L DE+  + +  +   Y A I+GY K         +   M + GV 
Sbjct: 233 DGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVA 292

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  YT L+ G S  G ++EA+ LF EM  +GI  D  +  S++  +   GN+  A+ L
Sbjct: 293 CNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVL 352

Query: 243 QNEMMGRGLLSGS 255
            +EM  +GL+  +
Sbjct: 353 FDEMTDKGLIPSA 365


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 141/287 (49%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D+  +G+I++GLC   K  + KLLL EM + G+  N V  T L+DA FKAG+
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL  L  M+       V+   VLIDGL KSG ++EA   F  +    L PN   Y+A
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK----HESFKE-------- 168
           LID  CK   I  A +   EM ++D +P+   Y++LI+GY+K    H++FK         
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 169 -----------------------ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                                  AL+L ++M + G+  ++    + V  + R G ++EA 
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L  +M   G+ PD +   +L+    + G +  A+ L  EM  + ++
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVV 287



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 130/287 (45%), Gaps = 36/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  D+  +  +I  L    K  D++ + S M+E GL+ +     T+++  FK G 
Sbjct: 281 MTSKNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGN 339

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP------- 113
            + AL L +EM   ++    +T  ++I+GLC++G +  AID    M   GL+P       
Sbjct: 340 WTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRI 399

Query: 114 --NVA--------------------------VYTALIDGLCKKNCIERARNLFDEMPKRD 145
             N++                          VY  LI  LCK     +A  +  +M +R 
Sbjct: 400 LLNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERG 459

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +I DTT Y ALI GY      K A    + M    V  D+  Y  L+ GLS+ G + EA 
Sbjct: 460 IIADTTTYNALIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEAD 519

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L  E+  RG++P+     +L+  H +  N  E + +  EM+ +G +
Sbjct: 520 DLLSEIKKRGLVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFI 566



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 119/251 (47%), Gaps = 1/251 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+  +   Y  +I   C       ++  L EM+E     N +  ++L++ Y K G   +A
Sbjct: 110 NLVPNYITYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDA 169

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             +L +M+       + T+ +L+DG  K+G    A+D + +M   GL  NV +  A ++ 
Sbjct: 170 FKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNN 229

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           + +   +E A  L  +M    + PD   YT L+DG+LK      ALNL   MT   V  D
Sbjct: 230 MKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFD 289

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  +  L+  L + G   +   ++  M   G+ PD     ++L  ++++GN   A+EL N
Sbjct: 290 IVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWN 348

Query: 245 EMMGRGLLSGS 255
           EM  R L+  +
Sbjct: 349 EMKSRKLIPNA 359



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 100/235 (42%), Gaps = 14/235 (5%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
            +K D  +Y  +I  LC       +  +L +M+E G+ A+T     L+  Y  +     A
Sbjct: 424 QLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRA 483

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
                 ML  R+   + T+ +L+ GL K+GL+ EA D    +   GL PN   Y  L+ G
Sbjct: 484 FMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACTYETLMCG 543

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK    +    ++ EM  +  IP   AY  LI  + K    K+A  L N M   GV   
Sbjct: 544 HCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAKELMNEMQTKGVSPT 603

Query: 185 LNAYTSLVWGLS------------RCGHLQEARVLFHEMIGRGILPDEIL--CIS 225
              Y  L+ G              +  +  EA+ LF EM  RG +P E    CIS
Sbjct: 604 CTTYDILICGWCNLLKMPDLGSTLKISYRAEAKRLFIEMNDRGFVPCESTQACIS 658



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  +      +I GLC   + E++  +L EM   GL   +     L++   K+  
Sbjct: 350 MKSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRR 409

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L   + +++ +++V    + +LI  LCK G+ R+A      M + G+  +   Y A
Sbjct: 410 ADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNA 469

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C  + ++RA   +  M    + PD   Y  L+ G  K     EA +L + + + G
Sbjct: 470 LIHGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRG 529

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +L+ G  +  + +E   ++ EM+ +G +P       L+    + G M +A 
Sbjct: 530 LVPNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRAYNMLIGYFSKMGKMKQAK 589

Query: 241 ELQNEMMGRGL 251
           EL NEM  +G+
Sbjct: 590 ELMNEMQTKGV 600


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  137 bits (345), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 129/248 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +  K D  +Y  I+ G C     E    L ++M  +    +    T+L+ A+ +    ++
Sbjct: 380 QGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTD 439

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL + + MLDS +   VVT  +L+DG  K  ++ EA  +  ++  FG+ PN+ +Y  +I+
Sbjct: 440 ALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIIN 499

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK N  +    +F +M KR  +PDT  Y+ +ID ++K     EA  L ++M + G   
Sbjct: 500 GLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKP 559

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  YTSL+ GL     L E   LF  MI  G+ PD IL  SL+  + +R NM  A+E+ 
Sbjct: 560 NVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIF 619

Query: 244 NEMMGRGL 251
             M   GL
Sbjct: 620 RGMGKLGL 627



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 126/291 (43%), Gaps = 35/291 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N   D   Y ++I+  C      D+  +   M ++G++ N V CT L+D + K   
Sbjct: 412 MVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERM 471

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK----------------SGLVREAIDY-- 102
             EA   L ++    I   +  + V+I+GLCK                 G V + + Y  
Sbjct: 472 IDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSI 531

Query: 103 -----------------FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                            F +M D G  PNV  YT+LI+GLC  + +     LF  M    
Sbjct: 532 IIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEG 591

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   YT+LI  Y K  + K AL +   M ++G+  D   YT L+ G S+   +  A+
Sbjct: 592 LTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQ 651

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
            L  EM  +G+ P  +   +L+  +++ G+  +A    N M+  G+   +K
Sbjct: 652 CLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAK 702



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 1/220 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  +L +Y  II GLC  +K +    + ++M + G   +TV+ + ++D++ KA +  EA 
Sbjct: 487 IVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAF 546

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  +MLD   +  V T+  LI+GLC    + E +  F  M   GL P+  +YT+LI   
Sbjct: 547 RLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCY 606

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK++ ++ A  +F  M K  +  D   YT LI G+ K  +   A  L   MT  G+   +
Sbjct: 607 CKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSV 666

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL-CI 224
             YT+L+ G  + G  ++A + ++ M+  GI PD  L CI
Sbjct: 667 VTYTNLIIGYFKIGDERKANMTYNSMLQAGITPDAKLSCI 706



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 113/212 (53%), Gaps = 2/212 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C E + +++  +   MK+ GL  +T   + L+D   K G+      LL EM 
Sbjct: 284 FNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMA 343

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + I  T+V++  L+ GLC++G V  A + F R+ + G   +  VY+ +++G C+   IE
Sbjct: 344 RNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIE 403

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
              +L+++M   + +PD   YT+LI  + +H +  +AL +   M + GV  ++   T LV
Sbjct: 404 VVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILV 463

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
            G  +   + EA +  H++   GI+P+  LC+
Sbjct: 464 DGFGKERMIDEAFLFLHKVRQFGIVPN--LCM 493



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K +   YGT ++GL    +   +   L  + + G   NT     ++  + + G+
Sbjct: 237 MEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQ 296

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + D M    +     ++ +L+DGLCK G V    D    M   G+ P +  Y++
Sbjct: 297 VQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSS 356

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+   +E A  LF  + ++    D   Y+ +++G  +H + +   +L N M    
Sbjct: 357 LLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHN 416

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   YTSL++   R  +L +A  +F  M+  G+ P+ + C  L+    +   +DEA 
Sbjct: 417 FVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAF 476

Query: 241 ELQNEMMGRGLL 252
              +++   G++
Sbjct: 477 LFLHKVRQFGIV 488



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 2/258 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + K +  +L L   ++  L   ++   ++ L  +MK +G + N    + LM AY      
Sbjct: 166 EAKKVGVELQLCNFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRL 225

Query: 62  --SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             +EA  LL EM    ++    T+   + GL ++  V  A ++   +   G   N   + 
Sbjct: 226 YLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFN 285

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+I G C++  ++ A  +FD M K  ++PDT +Y+ L+DG  K        +L   M   
Sbjct: 286 AVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARN 345

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+   L +Y+SL+ GL R G ++ A  LF  +  +G   D I+   +L    +  N++  
Sbjct: 346 GIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVV 405

Query: 240 IELQNEMMGRGLLSGSKN 257
            +L N+M+    +  + N
Sbjct: 406 CDLWNDMVHHNFVPDAYN 423



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 4/222 (1%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           LLSEM+  G+  N     T +    +  + + A + L  +           F  +I G C
Sbjct: 233 LLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFC 292

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G V+EAI+ F  M   GL P+   Y+ L+DGLCK+  +    +L  EM +  + P   
Sbjct: 293 REGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLV 352

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV--LFH 209
           +Y++L+ G  +    + A  L  R+ E G   D   Y+ ++ G   C HL    V  L++
Sbjct: 353 SYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGC--CQHLNIEVVCDLWN 410

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +M+    +PD     SL+       N+ +A+ +   M+  G+
Sbjct: 411 DMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGV 452



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 38/81 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + AD  LY  +I G       + ++ L+ EM   GLT + V  T L+  YFK G+  +A 
Sbjct: 627 LSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKAN 686

Query: 66  SLLDEMLDSRIEVTVVTFCVL 86
              + ML + I       C+L
Sbjct: 687 MTYNSMLQAGITPDAKLSCIL 707


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 130/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  +L  Y  +I G C       +  L  E+    L  N V+  TL+D + KA E
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SL   M+   ++  +  +  LI G CKSG + EA+     M    L P+V  YT 
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC ++ +  A  LF +M    + P +  Y +LI GY K  + ++AL+L + MT  G
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ ++  +++L+ G      ++ A  L+ EM  +GI+PD +   +L+  H++  NM EA+
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499

Query: 241 ELQNEMMGRGL 251
            L ++M+  G+
Sbjct: 500 RLYSDMLEAGI 510



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 125/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N+  D+  Y  +I GLCIE +  ++  L  +MK   +  ++    +L+  Y K   
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L  EM  S +E  ++TF  LIDG C    ++ A+  +  M   G+ P+V  YTA
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+  ++ A  L+ +M +  + P+   +  L+DG+ K      A++      +  
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   +T L+ GL + G++  A   F +M   GI PD    +S+LK H +   + + +
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM 604

Query: 241 ELQNEMMGRGLL 252
            LQ +M+  G+L
Sbjct: 605 MLQCDMIKTGIL 616



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 122/237 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ ++GT++ G C   +   ++ L   M + G+  N  +   L+  + K+G   EA+ LL
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM    +   V T+ +LI+GLC    V EA   F +M +  + P+ A Y +LI G CK+
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E+A +L  EM    + P+   ++ LIDGY      K A+ L   MT  G+  D+  Y
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
           T+L+    +  +++EA  L+ +M+  GI P++     L+   ++ G +  AI+   E
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+ +Y  +      +  +   + LL EM   G+  N  I T  +    +  +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + + M    +   + T+  +IDG CK+G VR+A   +  +    L PNV V+  
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG CK   +  AR+LF  M K  + P+   Y  LI G+ K  +  EA+ L + M  + 
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  YT L+ GL     + EA  LF +M    I P      SL+  + +  NM++A+
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429

Query: 241 ELQNEMMGRGL 251
           +L +EM   G+
Sbjct: 430 DLCSEMTASGV 440



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 12/250 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I      Y ++I G C E   E +  L SEM  +G+  N +  +TL+D Y    +
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  EM    I   VVT+  LID   K   ++EA+  +  M + G+HPN   +  
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG  K+  +  A + + E  ++    +   +T LI+G  ++     A    + M   G
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARV-----LFHEMIGRGILPDEILCISLLKKHYE-RG 234
           +  D+ +Y S++      GHLQE R+     L  +MI  GILP+ +L   LL + Y+  G
Sbjct: 580 ITPDICSYVSMLK-----GHLQEKRITDTMMLQCDMIKTGILPN-LLVNQLLARFYQANG 633

Query: 235 NMDEAIELQN 244
            +  A  L N
Sbjct: 634 YVKSACFLTN 643



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 9/207 (4%)

Query: 50  TLMDAYFKAGEPSEA----LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
           +L++   +  EPS       + L+++   +  + V  F +LI    + GL  EA+ +  R
Sbjct: 100 SLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGV--FSLLIMEFLEMGLFEEAL-WVSR 156

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
             +    P+     ++++GL ++   +     +  M  R ++PD   Y  L     K   
Sbjct: 157 --EMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGL 214

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
           + +   L + MT +G+  ++  YT  +  L R   ++EA  +F  M   G+LP+     +
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLL 252
           ++  + + GN+ +A  L  E++   LL
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELL 301


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 125/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C   + +    L+ EM+  GL  N      ++    K G+ +EA  +L
Sbjct: 287 DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVL 346

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   I    V +  LIDG CK G V  A   F  M    + P+   YTA+I GLC+ 
Sbjct: 347 REMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQT 406

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  LF EM  + + PD   YTALIDGY K    KEA +L N+M ++G+  ++  Y
Sbjct: 407 GRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 466

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L  GL +CG +  A  L HEM  +G+  +     SL+    + GN+D+A++L  +M  
Sbjct: 467 TALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV 526

Query: 249 RGL 251
            G 
Sbjct: 527 AGF 529



 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K +   Y  +I  LC   K  +++ +L EM   G+  + VI TTL+D + K G 
Sbjct: 314 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 373

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  L DEM   +I    +T+  +I GLC++G V EA   F  M    L P+   YTA
Sbjct: 374 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 433

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  ++ A +L ++M +  + P+   YTAL DG  K      A  L + M   G
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++L++  Y SLV GL + G++ +A  L  +M   G  PD +   +L+  + +   M  A 
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 553

Query: 241 ELQNEMMGRGL 251
           EL  +M+ R L
Sbjct: 554 ELLRQMLDREL 564



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 131/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y +++ GLC     + +  L+ +M+  G   + V  TTLMDAY K+ E
Sbjct: 489 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 548

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL +MLD  ++ TVVTF VL++G C SG++ +       M + G+ PN   Y +
Sbjct: 549 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 608

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C +N +     ++  M  + ++PD   Y  LI G+ K  + KEA  L   M   G
Sbjct: 609 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +L +++Y +L+ G  +     EAR LF +M   G++ D  +       +Y+ G M+  +
Sbjct: 669 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTL 728

Query: 241 ELQNEMMGRGLL 252
           EL +E + + L+
Sbjct: 729 ELCDEAIEKCLV 740



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  D   Y  +I GLC   +  ++  L  EM    L  + V  T L+D Y K G+
Sbjct: 384 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 443

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SL ++ML   +   +VT+  L DGLCK G V  A +    M   GL  N+  Y +
Sbjct: 444 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 503

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GLCK   I++A  L  +M      PD   YT L+D Y K      A  L  +M +  
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  +  L+ G    G L++   L   M+ +GI+P+     SL+K++  R NM    
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 623

Query: 241 ELQNEMMGRGLL 252
           E+   M  +G++
Sbjct: 624 EIYRGMCAKGVV 635



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y  +I G C E K +++  L ++M + GLT N V  T L D   K GE
Sbjct: 419 MVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 478

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM    +E+ + T+  L++GLCK+G + +A+     M   G HP+   YT 
Sbjct: 479 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 538

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D  CK   + RA  L  +M  R++ P    +  L++G+      ++   L   M E G
Sbjct: 539 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 598

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y SL+       +++    ++  M  +G++PD      L+K H +  NM EA 
Sbjct: 599 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 658

Query: 241 ELQNEMMGRGL 251
            L  +M+G+G 
Sbjct: 659 FLHRDMVGKGF 669



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 35/223 (15%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL +  E  +  +     ++ ++   LC+ G V EA     +M   G  P+V  Y+ +I+
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVIN 296

Query: 124 GLCKKNCIERARNLFDEM------PK------------------------RDMI-----P 148
           G C+   ++R   L +EM      P                         R+MI     P
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAP 356

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D   YT LIDG+ K  +   A  L + M +  +  D   YT+++ GL + G + EA  LF
Sbjct: 357 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 416

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           HEM+ + + PDE+   +L+  + + G M EA  L N+M+  GL
Sbjct: 417 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 459



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 5/206 (2%)

Query: 51  LMDAYFK----AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS-GLVREAIDYFGR 105
           + D +F+    AG   EA  L D+ML+  + ++V +  + I  L +    ++ A+  F  
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVE 243

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            P+ G+  N A Y  +   LC+   +  A  L  +M  R  IPD  +Y+ +I+GY +   
Sbjct: 244 FPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGE 303

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            +  L L   M   G+  +   Y  ++  L + G + EA  +  EMI  GI PD ++  +
Sbjct: 304 LQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTT 363

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGL 251
           L+    + GN+  A  L +EM  R +
Sbjct: 364 LIDGFCKLGNVSSAYRLFDEMQKRKI 389


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 134/259 (51%), Gaps = 12/259 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG+ +  D+  Y T+I G C++ K  D+K +  EMKE G+  + V    L+  + + G 
Sbjct: 409 MKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGL 468

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LLD +    ++    T   +I+GLC +G V+EA  +   + D  L      Y+A
Sbjct: 469 KKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLEN----YSA 524

Query: 121 LIDGLCKKNCIERARNLFDEMPKR--------DMIPDTTAYTALIDGYLKHESFKEALNL 172
           ++DG CK N   +A  LF  + K+        D+ P+   Y  LI  + +    K A  +
Sbjct: 525 MVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLV 584

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            + + E G+  D+  YT ++ G  R   L+EAR +F++M  RGI PD I    +L  H +
Sbjct: 585 FDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSK 644

Query: 233 RGNMDEAIELQNEMMGRGL 251
             N+ +AI L +EM+ RGL
Sbjct: 645 TNNLQDAINLYDEMIARGL 663



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 20/268 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  N   D   Y  +I G C E K ++++ +  +M   G+  +  I   L+ AY KAG 
Sbjct: 288 LRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGN 347

Query: 61  PSEALSLLDEML----------------DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG 104
             +A++L ++M+                DS I +  V + +++D LCK G V EA++   
Sbjct: 348 LLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLN 407

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            M    +  +V  YT LI G C +  +  A+N+F+EM +R + PD   Y  L+ G+ ++ 
Sbjct: 408 EMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNG 467

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             KEAL L + +   G+  +   +  ++ GL   G ++EA    + +  + +     +  
Sbjct: 468 LKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVD 527

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGLL 252
              K ++ R    +A EL + +  +G+L
Sbjct: 528 GYCKANFTR----KAYELFSRLSKQGIL 551



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 18/260 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG  I  LC +  FE++  +  EM+E G+  N V C+T ++              L  + 
Sbjct: 230 YGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALR 289

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +   +    +  +I G C    ++EA D F  M + G+ P+  +Y ALI   CK   + 
Sbjct: 290 AANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLL 349

Query: 133 RARNL----------------FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +A  L                F E     +  D   Y  ++D   K    +EA+ L N M
Sbjct: 350 QAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEM 409

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
               + LD+  YT+L+ G    G L +A+ +F EM  RGI PD I+  ++L   + R  +
Sbjct: 410 KGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPD-IVTYNILVGGFSRNGL 468

Query: 237 -DEAIELQNEMMGRGLLSGS 255
             EA+EL + +  +GL   S
Sbjct: 469 KKEALELLDCIGTQGLKPNS 488



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 16/240 (6%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           F+++   L + K  G   + + C  LM+   + G+   A+++   +    +     T+ +
Sbjct: 173 FDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGI 232

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
            I  LC+ G   EA+D F  M + G++PN    +  I+GLC     +        +   +
Sbjct: 233 FIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAAN 292

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
              DT AYTA+I G+      KEA ++   M   G+  D   Y +L+    + G+L +A 
Sbjct: 293 WPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAV 352

Query: 206 VLFHEMIGR----------------GILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L ++M+                  GI  DE+L   ++    + G ++EA+EL NEM GR
Sbjct: 353 ALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGR 412



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 70/126 (55%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   +++ +  +YG +I   C +   + ++L+   + E G+T + +  T +++ Y +   
Sbjct: 553 MLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNC 612

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + ++M +  I+  V+T+ V++DG  K+  +++AI+ +  M   GL P++  YTA
Sbjct: 613 LREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTA 672

Query: 121 LIDGLC 126
           L+ G C
Sbjct: 673 LLPGKC 678



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 35/209 (16%)

Query: 78  VTVVTFCVLIDGLCKSGLVREAID-----------------------------------Y 102
           V ++   +L+    + G+  EAID                                    
Sbjct: 155 VLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAI 214

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  +   GL+PN   Y   I  LC+K   E A ++F EM +  + P+    +  I+G   
Sbjct: 215 YRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCS 274

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           H+           +      +D  AYT+++ G      L+EA  +F +M+  GI PD  +
Sbjct: 275 HKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYI 334

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  + + GN+ +A+ L N+M+  G+
Sbjct: 335 YGALIHAYCKAGNLLQAVALHNDMVSNGI 363



 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 38/195 (19%), Positives = 79/195 (40%), Gaps = 26/195 (13%)

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR-------------EAIDYFGRM 106
           EP+ A S   ++ +S  +  V T+  LI  LC+  L R             E++  F   
Sbjct: 76  EPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDIT 135

Query: 107 PDFGL-----------HPNVAVYT--ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
             F +           H +V +     L+    +    + A +   +  +R  +P   + 
Sbjct: 136 ALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSC 195

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             L++  ++H     A+ +   +  +G++ +   Y   +  L R G+ +EA  +F EM  
Sbjct: 196 NFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEE 255

Query: 214 RGILPDEILCISLLK 228
            G+ P+ + C + ++
Sbjct: 256 AGVNPNAVTCSTYIE 270


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 121/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I GLC+ + F+D++ L ++M   G   + V    ++DA  K G   EA  L+ +M+
Sbjct: 48  YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 107

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      VVT+  ++DGLCKS  V EA+  F  M   G  PN   +  +I GLC+++ I+
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  +F EM  +D+ PD+ +Y  LIDG  K     EA  L  RM + G+      Y  ++
Sbjct: 168 QACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI 227

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G+     L EA  LF  M  +G  P       L+  H +RG +DEA  L   M   G
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDG 285



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 117/245 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  +     +  +I   C   K +++  LL  M ++G   + V  +TL+        
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL++M+  + + TVVT   LI GLCK+G ++EA +    M   G  P+V  Y  
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+    ERAR L  +M  R + P+   YTAL+ G  K     EA  +  +M   G
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  YT+L+ G    G +     LF EM+  GI PD ++  +L  +  + G    A+
Sbjct: 426 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 485

Query: 241 ELQNE 245
           E+  E
Sbjct: 486 EILRE 490



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + TII GLC +SK + +  +  EM+   +  ++     L+D   KAG+ +EA  L   ML
Sbjct: 153 HNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRML 212

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           DS I  + VT+ V+I G+C +  + EA++ F  M   G  P+   +  LID  CK+  ++
Sbjct: 213 DSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLD 272

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M     +PD   Y+ LI G        +A +L   M +      +    +L+
Sbjct: 273 EAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI 332

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G ++EAR +   M+  G  PD +   +L+  H   G  + A EL ++M+ RGL
Sbjct: 333 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 115/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K+I  D   YG +I GL    K  ++  L   M ++G+T + V    ++     A  
Sbjct: 176 MEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYT 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L   M       +  TF +LID  CK G + EA     RM D G  P+V  Y+ 
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    ++ AR+L ++M KR   P       LI G  K    KEA  + + M   G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +LV G  R G  + AR L  +M+ RG+ P+ +   +L+    +   + EA 
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415

Query: 241 ELQNEMMGRG 250
            +  +M   G
Sbjct: 416 GVFAQMKSSG 425



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 123/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  D   YG +I GL    K  D++ L  ++  +G+T +TV  T+L+     A  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  +M       + VT+ V+ID  CK G++ EA D   +M + G  P+V  Y  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DGLCK + +E A  LF+EM +    P+  ++  +I G  +     +A  + + M    
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D  +Y  L+ GL++ G L EA  LF  M+  GI P  +    ++        +DEA+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 241 ELQNEMMGRG 250
           EL   M  +G
Sbjct: 241 ELFKSMRSKG 250



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 118/242 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T++ GLC  S+ E++ LL +EM+  G T N     T++    +  +  +A  + 
Sbjct: 114 DVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM    I     ++ +LIDGL K+G + EA   F RM D G+ P+   Y  +I G+C  
Sbjct: 174 HEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLA 233

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  LF  M  +   P    +  LID + K     EA  L  RMT+ G   D+  Y
Sbjct: 234 YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTY 293

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           ++L+ GL     + +AR L  +M+ R   P  +   +L+    + G + EA E+ + M+ 
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 353

Query: 249 RG 250
            G
Sbjct: 354 SG 355



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 113/276 (40%), Gaps = 37/276 (13%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC  ++ +D++ LL +M +       V   TL+    KAG   EA  +L
Sbjct: 289 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 348

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+ S     VVT+  L+ G C++G    A +    M   GL PNV  YTAL+ GLCK 
Sbjct: 349 DAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 408

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +  A  +F +M      P+   YTALI G+         L L   M   G+  D   Y
Sbjct: 409 NRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 468

Query: 189 TSLV---------------------------WG----------LSRCGHLQEARVLFHEM 211
            +L                            WG          L   G ++ A     +M
Sbjct: 469 GTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDM 528

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +  G LP    C SL+    + G   EA  +  E+M
Sbjct: 529 VRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E  ++ ++     L+D   KAG+ ++A +L  ++L S +  + V +  LI GLC +  
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
             +A + F  M   G  P+   Y  +ID  CK+  +E A +L  +M +   +PD   Y  
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           ++DG  K    +EAL L N M  +G   +  ++ +++ GL +   + +A  +FHEM  + 
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I PD      L+    + G ++EA +L   M+  G+
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGI 216



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 6/145 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      +L  Y  +I G C   + +    L  EM   G++ + V+  TL     K+G 
Sbjct: 421 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 480

Query: 61  PSEALSLLDEMLDS-RIEV---TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
            + AL +L E  +S R E     V  F V  DGL ++G +  A+ +   M   G  P   
Sbjct: 481 SARALEILREGRESLRSEAWGDEVYRFAV--DGLLEAGKMEMALGFVRDMVRGGQLPAPE 538

Query: 117 VYTALIDGLCKKNCIERARNLFDEM 141
              +L+ GLCK      AR + +E+
Sbjct: 539 RCASLVAGLCKSGQGGEARAVLEEI 563


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 130/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K D+  Y TII  LC +    D+   LSEM + G+  N V  +T++  +   G+
Sbjct: 364 MEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM+   +    +TF +L+DGLC+ G+V EA   F  M + G+ PN+  Y A
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G C +  +  AR +F+ M  +   PD  +Y  LI+GY       +A  L  +M+   
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +++ GL   G L +A+ LF +M   G+LP  +    LL    + G++DEA+
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEAL 603

Query: 241 ELQNEMMGRGL 251
           +L   M  + L
Sbjct: 604 KLFKSMKEKKL 614



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 122/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ I  D   Y +I+ GLC   +  ++  L   M++NG   + V    ++D+ +K   
Sbjct: 259 MVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRL 318

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A   L EM+D  I   VVT+  ++ GLC  G + EAI  F +M   G  P+V  Y  
Sbjct: 319 VNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNT 378

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   +  A     EM  R + P+   Y+ ++ G+       EA  L   M    
Sbjct: 379 IIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   ++ LV GL + G + EAR +F  M  +G+ P+     +L+  +  R  M+EA 
Sbjct: 439 VMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEAR 498

Query: 241 ELQNEMMGRG 250
           ++   M+G+G
Sbjct: 499 KVFEIMVGKG 508



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 123/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    K D+  Y  II  L  +    D+   LSEM + G+  + V  TT++      G+
Sbjct: 294 MEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQ 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA+ L  +M     +  VV +  +ID LCK  LV +A+++   M D G+ PN   Y+ 
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ G C    ++ A  LF EM  R+++P+T  ++ L+DG  +     EA  +   MTE G
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ ++  Y +L+ G      + EAR +F  M+G+G  PD      L+  +     MD+A 
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533

Query: 241 ELQNEM 246
            L  +M
Sbjct: 534 ALLTQM 539



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 121/249 (48%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y T+I GLC       +  +  +M++NG   N V   T++D+  K    ++A+ 
Sbjct: 195 EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD 254

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
            L EM+   I    +T+  ++ GLC  G + EA   F RM   G  P+V  Y  +ID L 
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY 314

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +  A +   EM  + + PD   YT ++ G        EA+ L  +M + G   D+ 
Sbjct: 315 KDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVV 374

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           AY +++  L +   + +A     EM+ RGI P+ +   ++L      G +DEA +L  EM
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434

Query: 247 MGRGLLSGS 255
           +GR ++  +
Sbjct: 435 VGRNVMPNT 443



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    K ++  Y TII  LC +    D+   LSEM   G+  + +   +++      G+
Sbjct: 224 MEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L   M  +  +  VVT+ ++ID L K  LV +A D+   M D G+ P+V  YT 
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC    +  A  LF +M ++   PD  AY  +ID   K     +A+   + M + G
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y++++ G    G L EA  LF EM+GR ++P+ +    L+    + G + EA 
Sbjct: 404 IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEAR 463

Query: 241 ELQNEMMGRGL 251
            +   M  +G+
Sbjct: 464 WVFETMTEKGV 474



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 126/246 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D+  + T+I G+C E K + +  L +EM  +G   + +   TL++    +G  + A+
Sbjct: 159 IQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAV 218

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M  +  +  VVT+  +ID LCK  LV +A+D+   M   G+ P+   Y +++ GL
Sbjct: 219 HVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGL 278

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    +  A  LF  M +    PD   Y  +ID   K     +A +  + M + G+  D+
Sbjct: 279 CCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDV 338

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+++ GL   G L EA  LF +M  +G  PD +   +++    +   +++A+E  +E
Sbjct: 339 VTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE 398

Query: 246 MMGRGL 251
           M+ RG+
Sbjct: 399 MVDRGI 404



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 124/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y TI+ GLC   +  ++  L  +M++ G   + V   T++D+  K   
Sbjct: 329 MVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRL 388

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A+  L EM+D  I    VT+  ++ G C  G + EA   F  M    + PN   ++ 
Sbjct: 389 VNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC++  +  AR +F+ M ++ + P+   Y AL++GY       EA  +   M   G
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKG 508

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL++Y  L+ G      + +A+ L  +M  + + P+ +   +++K     G + +A 
Sbjct: 509 CAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQ 568

Query: 241 ELQNEMMGRGLL 252
           EL  +M   G+L
Sbjct: 569 ELFKKMCSSGML 580



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 105/216 (48%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +M + G+  + +  TTL++     G+   A+ L +EM+ S  E  V+++  LI+GLC SG
Sbjct: 153 KMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSG 212

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
               A+  F +M   G  PNV  Y  +ID LCK   +  A +   EM  R + PD   Y 
Sbjct: 213 NTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYN 272

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +++ G        EA  L  RM + G   D+  Y  ++  L +   + +A     EM+ +
Sbjct: 273 SIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQ 332

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           GI PD +   ++L      G ++EAI L  +M  +G
Sbjct: 333 GIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKG 368



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 114/242 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+N+  +   +  ++ GLC E    +++ +   M E G+  N      LM+ Y    +
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + + M+       + ++ +LI+G C S  + +A     +M    L PN   Y  
Sbjct: 494 MNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNT 553

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC    +  A+ LF +M    M+P    Y+ L++G  KH    EAL L   M E  
Sbjct: 554 IMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKK 613

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  YT L+ G+   G L+ A+ LF ++   GI P       ++K   + G  DEA 
Sbjct: 614 LEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAY 673

Query: 241 EL 242
           EL
Sbjct: 674 EL 675



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N +  +  +G  +  +    ++     L ++M   G+T        L++   +   
Sbjct: 84  MARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNH 143

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+S+  +M    I+  V+TF  LI+G+C  G ++ A++ +  M   G  P+V  Y  
Sbjct: 144 VDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNT 203

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC       A ++F +M +    P+   Y  +ID   K     +A++  + M   G
Sbjct: 204 LINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRG 263

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y S+V GL   G L EA  LF  M   G  PD +    ++   Y+   +++A 
Sbjct: 264 IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAA 323

Query: 241 ELQNEMMGRGL 251
           +  +EM+ +G+
Sbjct: 324 DFLSEMVDQGI 334



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 101/210 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y  ++ G C+  K  +++ +   M   G   +      L++ Y  +  
Sbjct: 469 MTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRR 528

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +LL +M   ++    VT+  ++ GLC  G + +A + F +M   G+ P +  Y+ 
Sbjct: 529 MDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSI 588

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GLCK   ++ A  LF  M ++ + PD   YT LI+G       + A  L ++++  G
Sbjct: 589 LLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADG 648

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
           +      Y  ++ GL + G   EA  LF +
Sbjct: 649 IQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 90/189 (47%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL+    M       ++V F   +  + K       +    +M  FG+   V     LI
Sbjct: 76  DALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILI 135

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC+ N ++ A +++ +M K  + PD   +T LI+G       K A+ L N M   G +
Sbjct: 136 NCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHE 195

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ +Y +L+ GL   G+   A  +F +M   G  P+ +   +++    +   +++A++ 
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDF 255

Query: 243 QNEMMGRGL 251
            +EM+GRG+
Sbjct: 256 LSEMVGRGI 264



 Score = 43.5 bits (101), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 52/120 (43%)

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           ++ A   F  M + +  P    +   +    K + +   + L N+M   GV   + +   
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+  L R  H+  A  ++ +M   GI PD I   +L+      G +  A+EL NEM+  G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  137 bits (344), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 130/239 (54%), Gaps = 5/239 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL-DEM 71
           YG ++ GLC   + ++++ LLS++       N V   TL++ + + G  +EA + + D+M
Sbjct: 318 YGYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKM 373

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +++     V TF  L++GLCK GL   A++    M   G  PN+  YT LIDG CKK  +
Sbjct: 374 INNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQL 433

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  +  EM  +    +T  Y ALI    KH    EAL++   M+  G   D+  + SL
Sbjct: 434 EEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSL 493

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++GL R   +++A  L+ +M+  G++ + +   +L+     RG + EA++L N+M+ RG
Sbjct: 494 IFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG 552



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 123/243 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + T++ GLC +  F  +  L+++M   G   N    T L+D + K G+  EA  +L
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EML     +  V +  LI  LCK G + EA+D FG M   G  P++  + +LI GLC+ 
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRV 500

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + +E A  L+ +M    +I ++  +  LI  +L+    +EAL L N M   G  LD   Y
Sbjct: 501 DEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITY 560

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+  L + G +++   LF EMI +G+ P  I C  L+      G +  A+E   +M+ 
Sbjct: 561 NGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIH 620

Query: 249 RGL 251
           RG 
Sbjct: 621 RGF 623



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 112/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  + ++I+GLC   + ED+  L  +M   G+ AN+V   TL+ A+ + GE
Sbjct: 478 MSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGE 537

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L+++ML     +  +T+  LI  LCK+G V + +  F  M   GL P++     
Sbjct: 538 IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNI 597

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C    +  A     +M  R   PD   Y +LI+G  K    +EALNL  ++   G
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   Y +L+  L R G   +A  L +  +  G +P+++
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDV 698



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 32/282 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  +   +G ++  LC+ ++ +++ LLL +M ++G   N++I  TL+DA  K   
Sbjct: 201 MLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDR 260

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL+EM        V TF  +I G C+   V E      RM   G  PN   Y  
Sbjct: 261 VDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGY 320

Query: 121 LIDGLCKKNCIERARNL--------------------------------FDEMPKRDMIP 148
           L+ GLCK   I+ A+ L                                +D+M     +P
Sbjct: 321 LMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVP 380

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D   ++ L++G  K   F  AL L N M   G   +LN YT L+ G  + G L+EA ++ 
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            EM+ +G   + +   +L+    + G + EA+++  EM  +G
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKG 482



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 113/274 (41%), Gaps = 35/274 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K +L  Y  +I G C + + E++ L+L EM   G + NTV    L+ A  K G+
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGK 467

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLC----------------------------- 91
             EAL +  EM     +  + TF  LI GLC                             
Sbjct: 468 IHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNT 527

Query: 92  ------KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                 + G ++EA+     M   G   +   Y  LI  LCK   +E+   LF+EM ++ 
Sbjct: 528 LIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKG 587

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P       LI+G+        AL     M   G   D+  Y SL+ GL + G +QEA 
Sbjct: 588 LTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEAL 647

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            LF ++   GI PD I   +L+      G  D+A
Sbjct: 648 NLFEKLQAEGIQPDSITYNTLICWLCREGAFDDA 681



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 1/241 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
              +Y  +I  L   + F+    LL +MKE G+     +   +M  Y +AG P +A  LL
Sbjct: 103 SFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLL 162

Query: 69  DEMLDSRI-EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            +M      E +  ++ V++D L        A + F  M   G+ PN   +  ++  LC 
Sbjct: 163 LDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCM 222

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
            N ++ A  L  +M K   +P++  Y  LID   K +   EAL L   M  +G   D+N 
Sbjct: 223 VNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNT 282

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + ++++G  R   + E   L   MI +G  P+++    L+    +   +DEA  L +++ 
Sbjct: 283 FNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP 342

Query: 248 G 248
           G
Sbjct: 343 G 343



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 73/153 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC     E    L  EM   GLT + + C  L++ +  AG+   AL  + +M+
Sbjct: 560 YNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMI 619

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+  LI+GLCK G ++EA++ F ++   G+ P+   Y  LI  LC++   +
Sbjct: 620 HRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFD 679

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            A  L     +   +P+   +  L+  + K  +
Sbjct: 680 DACFLLYRGVENGFVPNDVTWNILVYNFGKQSN 712



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 32/233 (13%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
            ++D       PS A ++  +ML   +     TF +++  LC    V  A      M   
Sbjct: 180 VVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKH 239

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G  PN  +Y  LID L K++ ++ A  L +EM      PD   +  +I G+ +     E 
Sbjct: 240 GCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEG 299

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL---------------------- 207
             L +RM   G   +   Y  L+ GL +   + EA+ L                      
Sbjct: 300 AKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRN 359

Query: 208 ----------FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
                     + +MI  G +PD     +L+    ++G    A+EL N+M  +G
Sbjct: 360 GRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKG 412


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 134/251 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN + ++  Y TII  L  + +  ++  + SEM   G++ N     +++    K  E
Sbjct: 205 MVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSE 264

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +L++EM+DS+I   VV F  L+D LCK G+V  A D    M   G+ P+V  YTA
Sbjct: 265 WKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTA 324

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A  +FD M ++   P+  +Y+ LI+GY K +   +A+ L   M +  
Sbjct: 325 LMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRE 384

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ GL   G L++A  LFHEM+  G +PD +    LL    +  ++D+A+
Sbjct: 385 LVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAM 444

Query: 241 ELQNEMMGRGL 251
            +   + G  L
Sbjct: 445 AMLKAIEGSNL 455



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 125/250 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+  + +   YGT+I GLC       +  LL  M +     N +   T++D  FK  +
Sbjct: 170 MVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQ 229

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL++  EM+   I   V T+  +I GLCK    +        M D  + PNV ++T 
Sbjct: 230 VNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTT 289

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK+  +  A ++ D M +R + PD   YTAL+DG+       EA  + + M   G
Sbjct: 290 LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++ +Y++L+ G  +   + +A  LF EM  R ++P+ +   +L+      G + +AI
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAI 409

Query: 241 ELQNEMMGRG 250
            L +EM+  G
Sbjct: 410 ALFHEMVASG 419



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 115/219 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y +II GLC  S+++    L++EM ++ +  N VI TTL+DA  K G 
Sbjct: 240 MIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGM 299

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  ++D M+   +E  VVT+  L+DG C    + EA   F  M   G  PNV  Y+ 
Sbjct: 300 VTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYST 359

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   I++A  LF+EM +R+++P+   Y  LI G       ++A+ L + M   G
Sbjct: 360 LINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASG 419

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              DL  Y  L+  L +  HL +A  +   + G  + PD
Sbjct: 420 QIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPD 458



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y  ++ G C+ S+ +++  +   M   G   N +  +TL++ Y K   
Sbjct: 310 MIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQR 369

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EM    +   +VT+  LI GLC  G +R+AI  F  M   G  P++  Y  
Sbjct: 370 IDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRI 429

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK   +++A  +   +   ++ PD  +Y  +IDG  +    + A +L + ++  G
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD-EA 239
           +  D+  YT ++ GL   G L EA  LF EM   G  PD+    +L+ + + R N    A
Sbjct: 490 LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDD-CTYNLITRGFLRNNETLSA 548

Query: 240 IELQNEMMGRGL 251
           I+L  EM+GRG 
Sbjct: 549 IQLLQEMLGRGF 560



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 123/246 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GLC+E K  ++  L  +M   G   N V   TL+    K G    A+ 
Sbjct: 141 QPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIR 200

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL  M+    E  V+T+  +ID L K   V EA++ F  M   G+ PNV+ Y ++I GLC
Sbjct: 201 LLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLC 260

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K +  +    L +EM    ++P+   +T L+D   K      A ++ + M + GV+ D+ 
Sbjct: 261 KFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVV 320

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YT+L+ G      + EA  +F  M+ +G  P+ I   +L+  + +   +D+A+ L  EM
Sbjct: 321 TYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEM 380

Query: 247 MGRGLL 252
             R L+
Sbjct: 381 CQRELV 386



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 120/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I +D+     +I   C  ++ +    +L+++ + G   +T   TTL+      G+
Sbjct: 100 MDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGK 159

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L D+M+    +   VT+  LI GLCK G  R AI     M      PNV  Y  
Sbjct: 160 IGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNT 219

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID L K   +  A N+F EM  + + P+ + Y ++I G  K   +K    L N M +  
Sbjct: 220 IIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSK 279

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  +T+LV  L + G +  A  +   MI RG+ PD +   +L+  H  R  MDEA 
Sbjct: 280 IMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEAD 339

Query: 241 ELQNEMMGRG 250
           ++ + M+ +G
Sbjct: 340 KVFDTMVRKG 349



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 101/212 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  Y T+I GLC   +  D+  L  EM  +G   + V    L+D   K   
Sbjct: 380 MCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRH 439

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+++L  +  S +   + ++ ++IDG+C+ G +  A D F  +   GLHP+V  YT 
Sbjct: 440 LDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTI 499

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLC +  +  A  LF EM      PD   Y  +  G+L++     A+ L   M   G
Sbjct: 500 MINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRG 559

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
              D +  T +V  LS  G  Q  + + HE +
Sbjct: 560 FSADASTITLIVEMLSDDGLDQSVKQILHEFV 591



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 1/229 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + + +  L  EM +  L  N V   TL+      G   +A++L  EM+
Sbjct: 357 YSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMV 416

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S     +VT+ +L+D LCK+  + +A+     +    L P++  Y  +IDG+C+   +E
Sbjct: 417 ASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELE 476

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +LF  +  + + PD   YT +I+G        EA  L   M   G   D   Y  + 
Sbjct: 477 AAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLIT 536

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            G  R      A  L  EM+GRG   D    I+L+ +      +D++++
Sbjct: 537 RGFLRNNETLSAIQLLQEMLGRGFSADAS-TITLIVEMLSDDGLDQSVK 584



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 102/220 (46%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M   G+ ++      +++++          S+L ++     +    TF  LI GLC
Sbjct: 96  LSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLC 155

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + EA+  F +M   G  PN   Y  LI GLCK      A  L   M +++  P+  
Sbjct: 156 VEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVI 215

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  +ID   K     EALN+ + M   G+  +++ Y S++ GL +    +    L +EM
Sbjct: 216 TYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEM 275

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   I+P+ ++  +L+    + G +  A ++ + M+ RG+
Sbjct: 276 VDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGV 315



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 88/189 (46%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EALS  + ML  +   +VV F  ++  +         +    +M   G+  +V     +I
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C  N ++   ++  ++ K    PDT  +T LI G        EAL+L ++M   G  
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +   Y +L+ GL + G+ + A  L   M+ +   P+ I   +++   ++   ++EA+ +
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236

Query: 243 QNEMMGRGL 251
            +EM+ +G+
Sbjct: 237 FSEMIAKGI 245



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/154 (21%), Positives = 65/154 (42%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + EA+  F RM      P+V  +  ++  +          +L  +M    +  D      
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +I+ +          ++  ++ ++G   D   +T+L+ GL   G + EA  LF +M+G G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
             P+ +   +L+    + GN   AI L   M+ +
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQK 208


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 136/290 (46%), Gaps = 35/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T+I  LC E    D++ L  EMKE G+  N      LM ++FK   
Sbjct: 199 MVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDN 258

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL    ++L   +    V F  LIDGLC++  + EA + F  MP + + P V VY +
Sbjct: 259 IKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNS 318

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
           LI G  +    + A   F E+ ++ + PD                               
Sbjct: 319 LIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSG 378

Query: 150 ----TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                 AY  LID Y K  +  EAL    RM+EVGV+ ++  Y+SL+ G S+ G ++ A 
Sbjct: 379 IALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAM 438

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            ++ EM+ +G+ P+ +   +L+  H + G+MD A  LQ EM  +G+ S +
Sbjct: 439 AIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNA 488



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 115/242 (47%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           LP    I+ GL           L  EM   G+  + V   TL++A    G+ ++A  + D
Sbjct: 138 LPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWD 197

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           +M+  RI+  VVT+  +I  LC+   + +A   F  M + G+ PN+  Y AL+    K++
Sbjct: 198 QMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRD 257

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I+ A   + ++ K  ++P+   +T LIDG  +     EA N+   M    V   +  Y 
Sbjct: 258 NIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYN 317

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           SL+ G  R G+ QEA   F E+I +G+ PDE  C  +++   + G M  A      M   
Sbjct: 318 SLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQS 377

Query: 250 GL 251
           G+
Sbjct: 378 GI 379



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 6/258 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +   +P+Y ++I G       +++     E+   GL  +   C+ ++      G+
Sbjct: 304 MPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQ 363

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A   L+ M  S I +    + VLID  CKSG + EA+    RM + G+ PNV  Y++
Sbjct: 364 MQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSS 423

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +E A  ++ EM  + + P+   YTALI G+ K+     A  L+  M E G
Sbjct: 424 LIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKG 483

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR------GILPDEILCISLLKKHYERG 234
           +  +    + LV GL R   +Q+A     E  G+        + + +  ++L+   Y  G
Sbjct: 484 IYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDG 543

Query: 235 NMDEAIELQNEMMGRGLL 252
             +EA    + M   G++
Sbjct: 544 QYNEACHFFSCMRDSGMV 561



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 112/238 (47%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++ T+I GLC  ++  ++K +  +M    +     +  +L+   F++G   EAL+   E+
Sbjct: 280 IFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   +     T  +++ GLC  G ++ A  +   M   G+  N A Y  LID  CK   +
Sbjct: 340 IRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNL 399

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A      M +  + P+   Y++LIDG+ K+   + A+ +   M   GV+ ++  YT+L
Sbjct: 400 DEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTAL 459

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           + G ++ G +  A  L  EM  +GI  + I    L+        + +A+    E  G+
Sbjct: 460 IHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQ 517



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 8/244 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  +   Y  +I   C     +++ +  + M E G+  N V  ++L+D + K GE
Sbjct: 374 MQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGE 433

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+++  EM+   +E  VVT+  LI G  K+G +  A      M + G++ N    + 
Sbjct: 434 MEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSV 493

Query: 121 LIDGLCKKNCIERARNLFDEMP------KRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           L+DGLC++N ++ A     E        K   I ++  Y  LI G      + EA +  +
Sbjct: 494 LVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFS 553

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M + G+  D   YT ++ GL   G++  A +L+ +M+  G+ P +  C  +    + R 
Sbjct: 554 CMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTK--CAMVCPDIWSRE 611

Query: 235 NMDE 238
           ++D 
Sbjct: 612 SVDH 615



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 6/254 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K ++ D      ++ GLC   + + +   L  M+++G+  N      L+D Y K+G   E
Sbjct: 342 KGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDE 401

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL     M +  +E  VVT+  LIDG  K+G +  A+  +  M   G+ PNV  YTALI 
Sbjct: 402 ALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIH 461

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL-----KNRMTE 178
           G  K   ++ A  L  EM ++ +  +    + L+DG  +    ++A+         + +E
Sbjct: 462 GHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSE 521

Query: 179 VGVDL-DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
               + +   Y +L++GL   G   EA   F  M   G++PD      +++     G + 
Sbjct: 522 KNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVL 581

Query: 238 EAIELQNEMMGRGL 251
            A+ L  +M+  G+
Sbjct: 582 NAMMLYADMVKVGV 595



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 3/168 (1%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VL+  L +  L  EA+  FGR+ +    P +    A++DGL K + + R   LFDEM  R
Sbjct: 111 VLVIALSQMALPDEALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEMLGR 167

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            M+P    Y  LI+         +A  + ++M    +D ++  YT+++  L     + +A
Sbjct: 168 GMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDA 227

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             LF EM   G+ P+     +L+  H++R N+  A+    +++  GL+
Sbjct: 228 EGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLV 275


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 125/245 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+  Y ++I+G   E     +  +L +M+  G   N    T L+D + K G+  EA 
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           ++L+EM    ++   V F  LI   CK   + EA++ F  MP  G  P+V  + +LI GL
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+ + I+ A  L  +M    ++ +T  Y  LI+ +L+    KEA  L N M   G  LD 
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL+ GL R G + +AR LF +M+  G  P  I C  L+      G ++EA+E Q E
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624

Query: 246 MMGRG 250
           M+ RG
Sbjct: 625 MVLRG 629



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 5/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I   L  +G ++   C  ++ + +  LL +M ++G   N+VI  TL+ +  K   
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL LL+EM          TF  +I GLCK   + EA     RM   G  P+   Y  
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN-LKNRMTEV 179
           L++GLCK   ++ A++LF  +PK    P+   +  LI G++ H    +A   L + +T  
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D+  Y SL++G  + G +  A  + H+M  +G  P+      L+    + G +DEA
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443

Query: 240 IELQNEMMGRGL 251
             + NEM   GL
Sbjct: 444 YNVLNEMSADGL 455



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 112/220 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  + ++I GLC   + + +  LL +M   G+ ANTV   TL++A+ + GE
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L++EM+     +  +T+  LI GLC++G V +A   F +M   G  P+      
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC+   +E A     EM  R   PD   + +LI+G  +    ++ L +  ++   G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  D   + +L+  L + G + +A +L  E I  G +P+ 
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K ++  Y  ++ G C   K +++  +L+EM  +GL  NTV    L+ A+ K   
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM     +  V TF  LI GLC+   ++ A+     M   G+  N   Y  
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+   ++  I+ AR L +EM  +    D   Y +LI G  +     +A +L  +M   G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                 +   L+ GL R G ++EA     EM+ RG  PD +   SL+      G +++ +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654

Query: 241 ELQNEMMGRGL 251
            +  ++   G+
Sbjct: 655 TMFRKLQAEGI 665



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 116/256 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K +   +  +I   C E +  ++  +  EM   G   +     +L+    +  E
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL LL +M+   +    VT+  LI+   + G ++EA      M   G   +   Y +
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC+   +++AR+LF++M +    P   +   LI+G  +    +EA+  +  M   G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  + SL+ GL R G +++   +F ++   GI PD +   +L+    + G + +A 
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689

Query: 241 ELQNEMMGRGLLSGSK 256
            L +E +  G +   +
Sbjct: 690 LLLDEGIEDGFVPNHR 705



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 1/232 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I  L    +F+    LL +MK+ G+     +  ++M  Y KAG P +   L+ EM
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172

Query: 72  LD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
            +    E T  ++ V+++ L      + A + F  M    + P +  +  ++   C  N 
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           I+ A +L  +M K   +P++  Y  LI    K     EAL L   M  +G   D   +  
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           ++ GL +   + EA  + + M+ RG  PD+I    L+    + G +D A +L
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I GLC     E++     EM   G T + V   +L++   +AG   + L++  ++    
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I    VTF  L+  LCK G V +A        + G  PN   ++ L+  +  +  ++R R
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 128/248 (51%), Gaps = 2/248 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K D+  Y   I G C   +  D+  +  EM   G+  N V   +L+D   KAGE S A 
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            ++  M  S +   +VT C+L+DGLCKS  + +AI  F ++ + GL P+V  YT LI G 
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGC 440

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    +  A NL  +M  ++++P    Y+ LIDG  +      A  L N M   G   D 
Sbjct: 441 CTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG-NMDEAIELQN 244
             Y+ L+  L +  HL EA  LF++MI RG+ PD ++C +++   Y +   +DEAI L  
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPD-VMCYTIMIDGYCKSERIDEAINLFR 559

Query: 245 EMMGRGLL 252
           EM  + L+
Sbjct: 560 EMHMKNLV 567



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 125/249 (50%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  +K ++ +Y  +I  LC     ++     +EM  NG+  N     +L+      G+  
Sbjct: 178 GFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFL 237

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           E   L+DEM+   ++V+V  F VLIDGLCK+G++ EA + F  M + G  PN+   TAL+
Sbjct: 238 EGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALM 297

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C K  ++ AR LFD + +     D   Y   I GY K    ++A+ + + M   GV 
Sbjct: 298 GGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVV 357

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y SL+  L + G +  A  +   M   G+ PD + C  LL    +   +D+AI L
Sbjct: 358 PNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILL 417

Query: 243 QNEMMGRGL 251
            N+++  GL
Sbjct: 418 FNQLVESGL 426



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 127/286 (44%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   + ++  +I GLC      +++ +  EM   G   N V CT LM  Y   G 
Sbjct: 246 MIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGN 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L D + +   +  V T+ V I G CK G VR+A+  F  M   G+ PN+  Y +
Sbjct: 306 VDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNS 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   +  A  +   M +  + PD      L+DG  K +   +A+ L N++ E G
Sbjct: 366 LIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 425

Query: 181 VDLDLNAYTSLVW-----------------------------------GLSRCGHLQEAR 205
           +  D+ +YT L+                                    GL R G +  A 
Sbjct: 426 LTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAW 485

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L +EM  +G LPD I    LL   +++ ++DEA+ L N+M+ RGL
Sbjct: 486 RLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGL 531



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 10/220 (4%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  ++ + G   +TV   T++      G   +AL   DE++++   +  V++ +LI+GLC
Sbjct: 94  IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLC 153

Query: 92  KSGLVREAIDYFGRM---------PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           ++G V EA++   RM           F +  NV +Y+ +ID LC+   ++     ++EM 
Sbjct: 154 ENGRVNEAVNLL-RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMM 212

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
              + P+   Y +LI G      F E   L + M   G+D+ +  +T L+ GL + G L 
Sbjct: 213 GNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLV 272

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           EAR +F EM+ RG  P+ + C +L+  +  +GN+D A EL
Sbjct: 273 EAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAREL 312



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 94/181 (51%)

Query: 19  GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
           GLC   + + + LL +++ E+GLT +    T L+     +    EA++LL +M    +  
Sbjct: 404 GLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVP 463

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
            +VT+  LIDGLC+SG +  A      M   G  P+   Y+ L+D L KK  ++ A  LF
Sbjct: 464 HIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLF 523

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
           ++M KR + PD   YT +IDGY K E   EA+NL   M    +  D+  YT L   + + 
Sbjct: 524 NQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKS 583

Query: 199 G 199
           G
Sbjct: 584 G 584



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 43/280 (15%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T++ GLC+      +     E+  NG + N V    L++   + G  +EA++LL  +   
Sbjct: 112 TVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKE 171

Query: 75  R--------IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------------ 114
           +        ++  VV + ++ID LC++G V E  +++  M   G+ PN            
Sbjct: 172 KEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLC 231

Query: 115 -----------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                                  V V+T LIDGLCK   +  AR +FDEM  R   P+  
Sbjct: 232 GVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIV 291

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             TAL+ GY    +   A  L + + E G   D+  Y   + G  + G +++A  +F EM
Sbjct: 292 TCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEM 351

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              G++P+ +   SL+    + G +  A E+   M   GL
Sbjct: 352 CREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGL 391



 Score = 45.4 bits (106), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 6/126 (4%)

Query: 5   NIKADLP---LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           ++K  LP    Y  ++  L  +   +++  L ++M + GL  + +  T ++D Y K+   
Sbjct: 492 HVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERI 551

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA++L  EM    +   +VT+ +L + + KSG       +   + D    P V  Y A 
Sbjct: 552 DEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKYLA- 610

Query: 122 IDGLCK 127
              LCK
Sbjct: 611 --ALCK 614


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 135/257 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI  D+  +  ++ G C +   +++K +L+ M +  +  + V  ++LMD Y    E
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A S+ + M    +   V ++ ++I+G CK  +V EA+  F  M    + P+V  Y++
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I  A  L DEM  R   PD   Y +++D   K     +A+ L  ++   G
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+N YT LV GL + G L++AR +F +++ +G   D      +++   ++G  DEA+
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633

Query: 241 ELQNEMMGRGLLSGSKN 257
            L ++M   G +  +K 
Sbjct: 634 ALLSKMEENGCIPDAKT 650



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 130/249 (52%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ D+ +Y TII G+C +    D+  L SE     +  +      L+  +   G+  
Sbjct: 326 GKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLK 385

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L ++M    I   V TF +L+DG CK G ++EA +    M    + P+V  Y++L+
Sbjct: 386 DAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLM 445

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C  N + +A ++F+ M  R +  +  +Y  +I+G+ K +   EA+ L   M    + 
Sbjct: 446 DGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIF 505

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y+SL+ GL + G +  A  L  EM  RG  PD I   S+L    ++ ++D+AI L
Sbjct: 506 PDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITL 565

Query: 243 QNEMMGRGL 251
             ++ G+G+
Sbjct: 566 LTKLKGQGI 574



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 126/241 (52%), Gaps = 6/241 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENG---LTANTVICTTLMDAYFKAGEPSEALSLLD 69
           YGT+I GLC   K  ++K  L  ++ N    +  + V+  T++D   K    ++A  L  
Sbjct: 301 YGTLINGLC---KVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYS 357

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           E +  RI   V T+  LI G C  G +++AID F +M    + P+V  ++ L+DG CK  
Sbjct: 358 EKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDG 417

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I+ A+N+   M K+ + PD   Y++L+DGY       +A ++ N M+  GV  ++ +Y 
Sbjct: 418 NIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYN 477

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            ++ G  +   + EA  LF EM  + I PD I   SL+    + G +  A+EL +EM  R
Sbjct: 478 IMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYR 537

Query: 250 G 250
           G
Sbjct: 538 G 538



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 8/256 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++IK D+  Y +++ G C+ ++   ++ + + M   G+TAN      +++ + K   
Sbjct: 429 MMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKM 488

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  EM   +I   V+T+  LIDGLCKSG +  A++    M   G  P++  Y +
Sbjct: 489 VDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNS 548

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D LCKK+ +++A  L  ++  + + PD   YT L+ G  +    ++A  +   +   G
Sbjct: 549 ILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNM 236
            +LD+ AYT ++ G    G   EA  L  +M   G +PD    EI+ +SL    +E+   
Sbjct: 609 YNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL----FEKDEN 664

Query: 237 DEAIELQNEMMGRGLL 252
           D A +L  EM+ RGLL
Sbjct: 665 DMAEKLLREMIMRGLL 680



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 123/248 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K I  D+  Y  +I G CI  K +D+  L ++M    +  +    + L+D + K G   
Sbjct: 361 SKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIK 420

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA ++L  M+   I+  VVT+  L+DG C    V +A   F  M   G+  NV  Y  +I
Sbjct: 421 EAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMI 480

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +G CK   ++ A  LF EM  + + PD   Y++LIDG  K      AL L + M   G  
Sbjct: 481 NGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQ 540

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y S++  L +  H+ +A  L  ++ G+GI PD      L+K   + G +++A ++
Sbjct: 541 PDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKV 600

Query: 243 QNEMMGRG 250
             +++ +G
Sbjct: 601 FEDLLVKG 608



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 130/254 (51%), Gaps = 1/254 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + K  +  + T I   C+   FE S +    ++ +NG   +T+  TT +  +   G+  +
Sbjct: 222 SFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQ 281

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL   D+++     +  V++  LI+GLCK G  + A++   R     + P+V +Y  +ID
Sbjct: 282 ALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIID 341

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G+CK   +  A +L+ E   + + PD   Y ALI G+      K+A++L N+MT   +  
Sbjct: 342 GMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIP 401

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  ++ LV G  + G+++EA+ +   M+ + I PD +   SL+  +     +++A  + 
Sbjct: 402 DVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIF 461

Query: 244 NEMMGRGLLSGSKN 257
           N M  RG+ +  ++
Sbjct: 462 NTMSHRGVTANVQS 475


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 134/255 (52%), Gaps = 6/255 (2%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G N K +   Y  II GLC   + ++++ L  EMK  G+  + +  T+L+  + ++G+  
Sbjct: 476 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 535

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L +EM+D  ++  V TF VLID LCK G V EA +    M   G  PN   YT L+
Sbjct: 536 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT----E 178
            GLC  + I  A  LF +M K   +PD   Y  L+ G  +  + K AL L  +M     +
Sbjct: 596 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 655

Query: 179 VGVDL--DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            G +   D+ +Y+ ++ GL + G   EAR LF EM   G++P+ I   SL+      G +
Sbjct: 656 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 715

Query: 237 DEAIELQNEMMGRGL 251
           ++A  L NEM+ +G+
Sbjct: 716 EDAKHLFNEMVDQGV 730



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 129/255 (50%), Gaps = 6/255 (2%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G   K  L  Y  II GLC + + ++++ L  EMK  G+  + +  TTL+  +  +G+  
Sbjct: 295 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWE 354

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L +EMLD  I+  V T  VLID LCK G V EA      +   G  P+V   T L+
Sbjct: 355 KAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLV 414

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM----TE 178
            GLC K+ I +A  LF +M K   +P+      L+ G  +  + K AL L   M    + 
Sbjct: 415 KGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSP 474

Query: 179 VGVDLDLNA--YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            G++   NA  Y+ ++ GL +CG   EAR LF EM   G++PD I   SL+      G  
Sbjct: 475 YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKW 534

Query: 237 DEAIELQNEMMGRGL 251
            +A  L NEM+  G+
Sbjct: 535 KDAKYLFNEMVDIGV 549



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 6/246 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D+  Y ++I G C   K++D+K L +EM + G+  +    + L+D   K G+
Sbjct: 509 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 568

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ M+        VT+  L+ GLC +  + EA   F +M   G  P+V  Y  
Sbjct: 569 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 628

Query: 121 LIDGLCKKNCIERARNLFDEMPK------RDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           L+ GLC+   I+ A  L  +M         +  PD  +Y+ +IDG  KH    EA  L  
Sbjct: 629 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFK 688

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M  +GV  ++ +YTSL+ G  R G L++A+ LF+EM+ +G+  + +    ++    + G
Sbjct: 689 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEG 748

Query: 235 NMDEAI 240
            +D+A+
Sbjct: 749 QIDKAL 754



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 127/245 (51%), Gaps = 6/245 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC++ +  ++  L   MK+ G   + +   TLM    + G+ + AL L 
Sbjct: 44  DIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLH 103

Query: 69  DEMLDS------RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            EML+       + + T+V++ ++IDGLCK     EA + F  M   G+ P+V  YT+LI
Sbjct: 104 QEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLI 163

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C+    E+A+ LF+EM    +  D T  + LID   K     EA  L   M + G  
Sbjct: 164 HGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI 223

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD+  Y++L+ GL     + EA  LF  M   G  PD I   +L+K   + GN++ A++L
Sbjct: 224 LDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQL 283

Query: 243 QNEMM 247
             EM+
Sbjct: 284 HQEML 288



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 127/261 (48%), Gaps = 6/261 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  D+  Y T+I G C+  K+E +K L +EM + G+  +    + L+D   K G+
Sbjct: 328 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 387

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ ++       VVT   L+ GLC    + +A   F +M   G  PNV     
Sbjct: 388 VIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 447

Query: 121 LIDGLCKKNCIERARNLFDEMPKR------DMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           L+ GLC+   I+ A  L   M         +  P+  +Y+ +IDG  K     EA  L  
Sbjct: 448 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 507

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M  +GV  D+ +YTSL+ G  R G  ++A+ LF+EM+  G+ PD      L+    + G
Sbjct: 508 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 567

Query: 235 NMDEAIELQNEMMGRGLLSGS 255
            + EA EL   M+ RG +  +
Sbjct: 568 KVIEANELLEVMIQRGCIPNT 588



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 125/255 (49%), Gaps = 6/255 (2%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G   K  L  Y  II GLC + + ++++ L  EMK  G+  + +  T+L+  + ++G+  
Sbjct: 114 GIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWE 173

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L +EMLD  I   V T  +LID LCK G V EA +    M   G   ++  Y+ LI
Sbjct: 174 KAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLI 233

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE---- 178
            GLC K+ I  A  LF  M K    PD  AY  L+ G  +  +   AL L   M      
Sbjct: 234 KGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGR 293

Query: 179 --VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
             +     L +Y+ ++ GL +     EAR LF EM  +GI+PD I   +L+      G  
Sbjct: 294 YGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKW 353

Query: 237 DEAIELQNEMMGRGL 251
           ++A  L NEM+  G+
Sbjct: 354 EKAKCLFNEMLDVGI 368



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 126/258 (48%), Gaps = 6/258 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  D+  Y ++I G C   K+E +K L +EM + G+ ++    + L+D   K G+
Sbjct: 147 MKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGK 206

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ M+     + +VT+  LI GLC    + EA   F  M   G  P+   Y  
Sbjct: 207 VIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGT 266

Query: 121 LIDGLCKKNCIERARNLFDEM---PKRDMI---PDTTAYTALIDGYLKHESFKEALNLKN 174
           L+ GLC+   I  A  L  EM     R  I   P   +Y+ +IDG  K     EA  L  
Sbjct: 267 LMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFK 326

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M   G+  D+ +YT+L+ G    G  ++A+ LF+EM+  GI PD      L+    ++G
Sbjct: 327 EMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKG 386

Query: 235 NMDEAIELQNEMMGRGLL 252
            + EA +L   ++ RG +
Sbjct: 387 KVIEANKLLEVVIQRGCI 404



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 12/251 (4%)

Query: 14  GTIIWGLC----IESKFEDSKLLLSEMKENGLTA--NTVICTTLMDAYFKAGEPSEALSL 67
            T++ GLC    I+   E  K +LS+    G+    N +  + ++D   K G   EA  L
Sbjct: 446 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 505

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             EM    +   V+++  LI G C+SG  ++A   F  M D G+ P+V  ++ LID LCK
Sbjct: 506 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 565

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           +  +  A  L + M +R  IP+T  YT L+ G   ++   EA  L  +M ++G   D+  
Sbjct: 566 EGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVT 625

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMI------GRGILPDEILCISLLKKHYERGNMDEAIE 241
           Y +L+ GL + G+++ A  L  +M+      G    PD I    ++    + G  DEA E
Sbjct: 626 YGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARE 685

Query: 242 LQNEMMGRGLL 252
           L  EM   G++
Sbjct: 686 LFKEMKALGVI 696



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 6/219 (2%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G+  +      L+D + K G+  EA  LL+ M+     + +VT+  LI GLC    + EA
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR------DMIPDTTAY 153
              F  M   G  P+   Y  L+ GLC+   I  A +L  EM            P   +Y
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           + +IDG  K     EA  L   M   G+  D+ +YTSL+ G  R G  ++A+ LF+EM+ 
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GI  D      L+    + G + EA EL   M+ RG +
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI 223



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 91/189 (48%), Gaps = 6/189 (3%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           ML   I+  V T  VLID  CK G V EA +    M   G   ++  Y+ LI GLC K+ 
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM----TEVGVDLD-- 184
           I  A  LF  M K    PD  AY  L+ G  +      AL+L   M    ++ G+     
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           L +Y+ ++ GL +     EAR LF EM  +G++PD I   SL+      G  ++A  L N
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 245 EMMGRGLLS 253
           EM+  G+ S
Sbjct: 181 EMLDVGIRS 189


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 121/234 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C+E + +D++ L   M+  G+  + V    L++ Y K+G   EA  L  EM+
Sbjct: 346 YNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMM 405

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  TV+T+  L+ GL + G VR+A + FG M    L P    Y  L+DGLCK N + 
Sbjct: 406 CKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLS 465

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF  +   D  P    +  LIDG  K    + A  L NR++  G++ ++  YT ++
Sbjct: 466 EAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMI 525

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL + G L+ A+ LF  M  +G  P+ +   +L++   +   M + +EL  EM
Sbjct: 526 HGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEM 579



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG+ I  D+  Y +II G+C   ++E +K L +EM + G+  N V    L+DA  KAG+
Sbjct: 264 MKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGK 323

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M+         T+  LIDG C  G + +A D F  M   G+  +   Y  
Sbjct: 324 MEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNV 383

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +  A+ L+ EM  ++++P    Y  L+ G  +    ++A NL   M    
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD 443

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y  L+ GL +  HL EA  LFH +      P   +   L+    +   ++ A 
Sbjct: 444 LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAR 503

Query: 241 ELQNEMMGRGL 251
           EL N +   GL
Sbjct: 504 ELFNRLSHEGL 514



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 6/246 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + +++ GLC+ S+  ++  LL +M   G   N V   TL++     G    A+ L +EML
Sbjct: 165 FTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEML 224

Query: 73  DSR------IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +        I+  +V +C +ID LCK GL+ +  + F  M   G+ P+V  Y+++I G+C
Sbjct: 225 NGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMC 284

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                E A+ LF+EM    + P+   +  LID   K    +EA +L   M + G   D  
Sbjct: 285 HTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTF 344

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +L+ G    G + +AR LF  M  +GI  D +    L+  + + G M EA +L  EM
Sbjct: 345 TYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREM 404

Query: 247 MGRGLL 252
           M + ++
Sbjct: 405 MCKEIM 410



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 117/240 (48%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  IK +L  Y TII  LC +   +  K L  EMK  G++ + V  ++++      G   
Sbjct: 231 GVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWE 290

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A  L +EM+D  +   VVTF VLID LCK+G + EA      M   G  P+   Y  LI
Sbjct: 291 GAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLI 350

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C +  I+ AR+LF  M  + +  D  +Y  LI+GY K     EA  L   M    + 
Sbjct: 351 DGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIM 410

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             +  Y +L+ GL R G +++A  LF EM    + P+      LL    +  ++ EA+EL
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMEL 470



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 106/219 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D   Y  +I G C   +  ++K L  EM    +    +   TL+   F+ G+
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L  EM    +     T+ +L+DGLCK+  + EA++ F  + +    P++ ++  
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   IE AR LF+ +    + P+   YT +I G  K    + A +L   M E G
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              +L  + +L+ G  +   +Q+   L  EM  +   PD
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPD 587



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 98/197 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   +  Y T++ GL  E K  D+  L  EMK + LT  +     L+D   K   
Sbjct: 404 MMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNH 463

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA+ L   + +   + ++  F  LIDGLCK+  +  A + F R+   GL PNV  YT 
Sbjct: 464 LSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTV 523

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK   +E A++LF  M ++   P+   +  L+ G+ +++  ++ + L   M E  
Sbjct: 524 MIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKD 583

Query: 181 VDLDLNAYTSLVWGLSR 197
              D +  + +V  LS+
Sbjct: 584 FSPDASTISIVVDLLSK 600



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 107/244 (43%), Gaps = 6/244 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++  +    ++ D   L   M   GL  + +    L++ Y    +    L++L EML
Sbjct: 95  FNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEML 154

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   VTF  L+ GLC    + EA     +M   G  PNV  Y  L++GLC      
Sbjct: 155 RRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTM 214

Query: 133 RARNLFDEMPKRD------MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            A  L +EM   +      + P+   Y  +ID   K     +   L   M   G+  D+ 
Sbjct: 215 LAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVV 274

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           AY+S++ G+   G  + A+ LF+EM+  G+ P+ +    L+    + G M+EA  L   M
Sbjct: 275 AYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLM 334

Query: 247 MGRG 250
           + RG
Sbjct: 335 IQRG 338



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 86/172 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  ++  +   Y  ++ GLC  +   ++  L   ++ +    +  I   L+D   KA +
Sbjct: 439 MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARK 498

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L + +    +E  V+T+ V+I GLCKSG +  A D F  M + G  PN+  +  
Sbjct: 499 IEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNT 558

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           L+ G C+ + +++   L  EM ++D  PD +  + ++D   K E ++E L+L
Sbjct: 559 LMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHL 610



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/144 (20%), Positives = 64/144 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  + +  + ++  +I GLC   K E ++ L + +   GL  N +  T ++    K+G+
Sbjct: 474 LENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQ 533

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L   M +      +VTF  L+ G C++  +++ ++    M +    P+ +  + 
Sbjct: 534 LENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISI 593

Query: 121 LIDGLCKKNCIERARNLFDEMPKR 144
           ++D L K        +L    P +
Sbjct: 594 VVDLLSKDEKYREYLHLLPTFPAQ 617



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 2/159 (1%)

Query: 91  CKSGLVR--EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           CKSG ++  EA   F  + D    P ++ +  L+  + K        +L+  M    + P
Sbjct: 66  CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D      LI+ Y         L +   M   G   +   +TSLV GL     + EA  L 
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            +M+  G  P+ +   +LL      GN   A++L  EM+
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEML 224


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 126/246 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK       +  Y TII G C   K   +  LL EM    +  N +    L+D + +   
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDEN 314

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  + +EM    ++  VVT+  LI+GLC +G + EA+    +M   GL PNV  Y A
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CKK  ++ AR + D++ KR + P+   +  LID Y K     +A  L++ M + G
Sbjct: 375 LINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG 434

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +++ Y  L+ G  R G+++EAR L  EM G G+  D +    L+    ++G   +A+
Sbjct: 435 VCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAV 494

Query: 241 ELQNEM 246
            L +EM
Sbjct: 495 RLLDEM 500



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 117/217 (53%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           EM    +  N V    +++   K G+  +A  ++++M       +V+T+  +IDG CK+G
Sbjct: 219 EMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAG 278

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + +A      M    +HPN   +  LIDG C+   +  A+ +F+EM ++ + P+   Y 
Sbjct: 279 KMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYN 338

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +LI+G   +    EAL L+++M+ +G+  ++  Y +L+ G  +   L+EAR +  ++  R
Sbjct: 339 SLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKR 398

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G+ P+ I   +L+  + + G MD+A  L++ M+  G+
Sbjct: 399 GLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 3/237 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ ++  Y ++I GLC   K +++  L  +M   GL  N V    L++ + K   
Sbjct: 325 MQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKM 384

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +LD++    +   V+TF  LID   K+G + +A      M D G+ PNV+ Y  
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNC 444

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT--- 177
           LI G C++  ++ AR L  EM    +  D   Y  L+D   K    ++A+ L + MT   
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLME 504

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
           + G   ++  Y  L+ G    G L+EA  L +EM+ +G++P+      L  +  E+G
Sbjct: 505 KKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 97/209 (46%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           AN++I   L+ AY K GE   AL   D   D    ++ ++   ++  L K G +      
Sbjct: 157 ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESV 216

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M    +  NV  +  +I+GLCK    ++A ++ ++M      P    Y  +IDGY K
Sbjct: 217 YKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCK 276

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                +A  L   M    +  +   +  L+ G  R  ++  A+ +F EM  +G+ P+ + 
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             SL+      G +DEA+ LQ++M G GL
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGL 365



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 73/160 (45%), Gaps = 26/160 (16%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++  Y  +I G C E   ++++ L  EM+ NGL A+ V    L+DA  K GE  +A+ LL
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 69  DEML---DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           DEM           +VT+ VLI G C  G + EA      M + GL PN   Y       
Sbjct: 498 DEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDI----- 552

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
                      L DEM ++  IPD       IDG+L + S
Sbjct: 553 -----------LRDEMMEKGFIPD-------IDGHLYNVS 574


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 131/250 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T+I+G C+  +  ++  LL+EM    +  N    T LMDA  K G+
Sbjct: 176 MDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGK 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +LL  M    ++  VV++  L+DG C  G V+ A   F  M   G++PNV  Y  
Sbjct: 236 VKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNI 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   ++ A NL  E+  ++M+P+T  Y++LIDG+ K      AL+L   M   G
Sbjct: 296 MIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRG 355

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YTSL+  L +  +L +A  LF +M  RGI P++    +L+    + G    A 
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQ 415

Query: 241 ELQNEMMGRG 250
           +L   ++ +G
Sbjct: 416 KLFQHLLVKG 425



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 128/248 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           ++ + ++ +Y TII GLC +    ++  L SEM   G+  N +  +TL+  +  AG+  E
Sbjct: 144 RSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLME 203

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+EM+   I   V T+ +L+D LCK G V+EA +    M   G+ PNV  Y  L+D
Sbjct: 204 AFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMD 263

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C    ++ A+ +F  M ++ + P+  +Y  +ID   K +   EA+NL   +    +  
Sbjct: 264 GYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVP 323

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y+SL+ G  + G +  A  L  EM  RG   D +   SLL    +  N+D+A  L 
Sbjct: 324 NTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALF 383

Query: 244 NEMMGRGL 251
            +M  RG+
Sbjct: 384 MKMKERGI 391



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 131/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K ++  Y T++ G C+  + +++K +   M + G+  N      ++D   K+  
Sbjct: 246 MTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKR 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++LL E+L   +    VT+  LIDG CK G +  A+D    M   G   +V  YT+
Sbjct: 306 VDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTS 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK   +++A  LF +M +R + P+   YTALIDG  K    K A  L   +   G
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKG 425

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +++  Y  ++ GL + G L EA  +  +M   G +PD +    +++  +E+   D+A 
Sbjct: 426 CRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAE 485

Query: 241 ELQNEMMGRGLL 252
           +L +EM+ + LL
Sbjct: 486 KLLHEMIAKDLL 497



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 124/241 (51%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T++ GLC++ + + S     ++   G   + V   TL++   K GE   AL LL  + D 
Sbjct: 85  TLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDR 144

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
                VV +  +IDGLCK  LV EA D +  M   G+ PNV  Y+ LI G C    +  A
Sbjct: 145 STRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEA 204

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L +EM  +++ P+   YT L+D   K    KEA NL   MT+ GV  ++ +Y +L+ G
Sbjct: 205 FGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDG 264

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
               G +Q A+ +FH M+ +G+ P+      ++ +  +   +DEA+ L  E++ + ++  
Sbjct: 265 YCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPN 324

Query: 255 S 255
           +
Sbjct: 325 T 325



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ DL     +I   C   +   S  +L ++ + G   NT+   TLM      GE
Sbjct: 36  MQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGE 95

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             ++L   D+++    ++  V++  L++GLCK G  R A+     + D    PNV +Y  
Sbjct: 96  VKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNT 155

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   +  A +L+ EM  R + P+   Y+ LI G+       EA  L N M    
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN 215

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  YT L+  L + G ++EA+ L   M   G+ P+ +   +L+  +   G +  A 
Sbjct: 216 INPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAK 275

Query: 241 ELQNEMMGRGL 251
           ++ + M+ +G+
Sbjct: 276 QMFHTMVQKGV 286



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 122/248 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            +  + D   Y T++ GLC   +   +  LL  +++     N V+  T++D   K    +
Sbjct: 108 AQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVN 167

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA  L  EM    I   V+T+  LI G C +G + EA      M    ++PNV  YT L+
Sbjct: 168 EAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILM 227

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK+  ++ A+NL   M K  + P+  +Y  L+DGY      + A  + + M + GV+
Sbjct: 228 DALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVN 287

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++ +Y  ++  L +   + EA  L  E++ + ++P+ +   SL+    + G +  A++L
Sbjct: 288 PNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDL 347

Query: 243 QNEMMGRG 250
             EM  RG
Sbjct: 348 LKEMYHRG 355



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 30/247 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  ++  Y  +I  LC   + +++  LL E+    +  NTV  ++L+D + K G 
Sbjct: 281 MVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGR 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + AL LL EM        VVT+  L+D LCK+  + +A   F +M + G+ PN   YTA
Sbjct: 341 ITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTA 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK    + A+ LF  +  +    +   Y  +I G  K     EAL +K++M E G
Sbjct: 401 LIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENG 460

Query: 181 VDLDLNAYTSLVWGLS-----------------------RCGHLQ-------EARVLFHE 210
              D   +  ++  L                        R  H +       +A  L HE
Sbjct: 461 CIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLRFRDFHGERSPNENDKAEKLLHE 520

Query: 211 MIGRGIL 217
           MI +G+L
Sbjct: 521 MIAKGLL 527



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 108/239 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  I+  L     +  +  L  +M+  G+  +      L++ +   G+ + + ++L ++L
Sbjct: 13  FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +   +T   L+ GLC  G V++++ +  ++   G   +   Y  L++GLCK     
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   +  R   P+   Y  +IDG  K +   EA +L + M   G+  ++  Y++L+
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +G    G L EA  L +EMI + I P+      L+    + G + EA  L   M   G+
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 81/182 (44%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           ML  R    ++ F  ++  L K      AI  F +M   G+ P++     LI+  C    
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +  +  +  ++ K    P+T     L+ G       K++L+  +++   G  +D  +Y +
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ GL + G  + A  L   +  R   P+ ++  +++    +   ++EA +L +EM  RG
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 251 LL 252
           + 
Sbjct: 181 IF 182


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  136 bits (343), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K +   Y  +I  LC   K  +++ +L EM   G+  + VI TTL+D + K G 
Sbjct: 214 MQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGN 273

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  L DEM   +I    +T+  +I GLC++G V EA   F  M    L P+   YTA
Sbjct: 274 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 333

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  ++ A +L ++M +  + P+   YTAL DG  K      A  L + M   G
Sbjct: 334 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++L++  Y SLV GL + G++ +A  L  +M   G  PD +   +L+  + +   M  A 
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 453

Query: 241 ELQNEMMGRGL 251
           EL  +M+ R L
Sbjct: 454 ELLRQMLDREL 464



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 130/249 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K ++ ++  Y +++ GLC     + +  L+ +M+  G   + V  TTLMDAY K+ E   
Sbjct: 392 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 451

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL +MLD  ++ TVVTF VL++G C SG++ +       M + G+ PN   Y +LI 
Sbjct: 452 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 511

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             C +N +     ++  M  + ++PD   Y  LI G+ K  + KEA  L   M   G +L
Sbjct: 512 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNL 571

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +++Y +L+ G  +     EAR LF +M   G++ D  +       +Y+ G M+  +EL 
Sbjct: 572 TVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELC 631

Query: 244 NEMMGRGLL 252
           +E + + L+
Sbjct: 632 DEAIEKCLV 640



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 115/220 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L+ EM+  GL  N      ++    K G+ +EA  +L EM+   I    V +  LIDG C
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G V  A   F  M    + P+   YTA+I GLC+   +  A  LF EM  + + PD  
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YTALIDGY K    KEA +L N+M ++G+  ++  YT+L  GL +CG +  A  L HEM
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +G+  +     SL+    + GN+D+A++L  +M   G 
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 429



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  D   Y  +I GLC   +  ++  L  EM    L  + V  T L+D Y K G+
Sbjct: 284 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SL ++ML   +   +VT+  L DGLCK G V  A +    M   GL  N+  Y +
Sbjct: 344 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 403

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GLCK   I++A  L  +M      PD   YT L+D Y K      A  L  +M +  
Sbjct: 404 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 463

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  +  L+ G    G L++   L   M+ +GI+P+     SL+K++  R NM    
Sbjct: 464 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 523

Query: 241 ELQNEMMGRGLL 252
           E+   M  +G++
Sbjct: 524 EIYRGMCAKGVV 535



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y  +I G C E K +++  L ++M + GLT N V  T L D   K GE
Sbjct: 319 MVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 378

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM    +E+ + T+  L++GLCK+G + +A+     M   G HP+   YT 
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTT 438

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D  CK   + RA  L  +M  R++ P    +  L++G+      ++   L   M E G
Sbjct: 439 LMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKG 498

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y SL+       +++    ++  M  +G++PD      L+K H +  NM EA 
Sbjct: 499 IMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAW 558

Query: 241 ELQNEMMGRGL 251
            L  +M+G+G 
Sbjct: 559 FLHRDMVGKGF 569


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 134/255 (52%), Gaps = 6/255 (2%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G N K +   Y  II GLC   + ++++ L  EMK  G+  + +  T+L+  + ++G+  
Sbjct: 632 GINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWK 691

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L +EM+D  ++  V TF VLID LCK G V EA +    M   G  PN   YT L+
Sbjct: 692 DAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT----E 178
            GLC  + I  A  LF +M K   +PD   Y  L+ G  +  + K AL L  +M     +
Sbjct: 752 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 811

Query: 179 VGVDL--DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            G +   D+ +Y+ ++ GL + G   EAR LF EM   G++P+ I   SL+      G +
Sbjct: 812 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 871

Query: 237 DEAIELQNEMMGRGL 251
           ++A  L NEM+ +G+
Sbjct: 872 EDAKHLFNEMVDQGV 886



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 128/261 (49%), Gaps = 6/261 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  D+  Y T+I G C+  K+E +K L +EM + G+  +    + L+D   K G+
Sbjct: 484 MKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGK 543

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ ++     + VVT   L+ GLC    + +A   F +M   G  PNV     
Sbjct: 544 VIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCAT 603

Query: 121 LIDGLCKKNCIERARNLFDEMPKR------DMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           L+ GLC+   I+ A  L   M         +  P+  +Y+ +IDG  K     EA  L  
Sbjct: 604 LMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFK 663

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M  +GV  D+ +YTSL+ G  R G  ++A+ LF+EM+  G+ PD      L+    + G
Sbjct: 664 EMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEG 723

Query: 235 NMDEAIELQNEMMGRGLLSGS 255
            + EA EL   M+ RG +  +
Sbjct: 724 KVIEANELLEVMIQRGCIPNT 744



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 6/246 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D+  Y ++I G C   K++D+K L +EM + G+  +    + L+D   K G+
Sbjct: 665 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 724

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ M+        VT+  L+ GLC +  + EA   F +M   G  P+V  Y  
Sbjct: 725 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 784

Query: 121 LIDGLCKKNCIERARNLFDEMPK------RDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           L+ GLC+   I+ A  L  +M         +  PD  +Y+ +IDG  KH    EA  L  
Sbjct: 785 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFK 844

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M  +GV  ++ +YTSL+ G  R G L++A+ LF+EM+ +G+  + +    ++    + G
Sbjct: 845 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEG 904

Query: 235 NMDEAI 240
            +D+A+
Sbjct: 905 QIDKAL 910



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 123/245 (50%), Gaps = 6/245 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC+E +  ++  L   M++ G   + +   TLM    + G  + AL L 
Sbjct: 88  DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH 147

Query: 69  DEMLDS------RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            EML+       + + T++++ ++IDGLCK     EA + F  M   G+ P+V  YT+LI
Sbjct: 148 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLI 207

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C     E+A+ LF+EM    + PD T    LID + K     EA  L   M   G  
Sbjct: 208 HGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCI 267

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD+  Y++L+ GL     + EA  LF  M   G  PD I   +L+K   + G ++ A+ L
Sbjct: 268 LDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHL 327

Query: 243 QNEMM 247
             EM+
Sbjct: 328 HQEML 332



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 128/255 (50%), Gaps = 6/255 (2%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G   K  L  Y  II GLC + + ++++ L  EMK  G+  + +  TTL+  +  +G+  
Sbjct: 451 GIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWE 510

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L +EMLD  I+  V T  VLID LCK G V EA      +   G   +V   T L+
Sbjct: 511 KAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLV 570

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM----TE 178
            GLC K+ I +A  LF +M K   +P+      L+ G  +  + K AL L   M    + 
Sbjct: 571 KGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSP 630

Query: 179 VGVDLDLNA--YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            G++   NA  Y+ ++ GL +CG   EAR LF EM   G++PD I   SL+      G  
Sbjct: 631 YGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKW 690

Query: 237 DEAIELQNEMMGRGL 251
            +A  L NEM+  G+
Sbjct: 691 KDAKYLFNEMVDIGV 705



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 125/245 (51%), Gaps = 6/245 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC+E +  ++  L   M++ G   + +   TLM    + G  + AL L 
Sbjct: 381 DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH 440

Query: 69  DEMLDS------RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            EML+       + + T++++ ++IDGLCK     EA + F  M   G+ P+V  YT LI
Sbjct: 441 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLI 500

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C     E+A+ LF+EM    + PD T  + LID   K     EA  L   + + G  
Sbjct: 501 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 560

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD+   T+LV GL     + +A  LF +M   G +P+ + C +L+K   + GN+  A+EL
Sbjct: 561 LDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 620

Query: 243 QNEMM 247
              M+
Sbjct: 621 HKNML 625



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 7/254 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  D+  Y ++I G C   K+E +K L +EM + G+  +      L+D + K G+
Sbjct: 191 MKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGK 250

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ M+     + +VT+  LI GLC    + EA   F  M   G  P+   Y  
Sbjct: 251 VIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGT 310

Query: 121 LIDGLCKKNCIERARNLFDEMPK-------RDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           L+ GLC+   I  A +L  EM         + + PD T  + LID   K     EA  L 
Sbjct: 311 LMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELL 370

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
             M + G  LD+  Y++L+ GL     + EA  LF  M   G  PD I   +L+K   + 
Sbjct: 371 EVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQT 430

Query: 234 GNMDEAIELQNEMM 247
           GN++ A++L  EM+
Sbjct: 431 GNINIALQLHQEML 444



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 123/251 (49%), Gaps = 12/251 (4%)

Query: 14  GTIIWGLC----IESKFEDSKLLLSEMKENGLTA--NTVICTTLMDAYFKAGEPSEALSL 67
            T++ GLC    I+   E  K +LS+    G+    N +  + ++D   K G   EA  L
Sbjct: 602 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             EM    +   V+++  LI G C+SG  ++A   F  M D G+ P+V  ++ LID LCK
Sbjct: 662 FKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCK 721

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           +  +  A  L + M +R  IP+T  YT L+ G   ++   EA  L  +M ++G   D+  
Sbjct: 722 EGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVT 781

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMI------GRGILPDEILCISLLKKHYERGNMDEAIE 241
           Y +L+ GL + G+++ A  L  +M+      G    PD I    ++    + G  DEA E
Sbjct: 782 YGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARE 841

Query: 242 LQNEMMGRGLL 252
           L  EM   G++
Sbjct: 842 LFKEMKALGVI 852



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 6/255 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ D+     +I  LC E K  ++  LL  M + G   + V  +TL+         SE
Sbjct: 341 KCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISE 400

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD----FGLH--PNVAV 117
           A  L   M         +T+  L+ GLC++G +  A+     M +    +G+   P +  
Sbjct: 401 ATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS 460

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y+ +IDGLCK    + AR LF+EM  + ++PD  +YT LI G+     +++A  L N M 
Sbjct: 461 YSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 520

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           +VG+  D+   + L+  L + G + EA  L   +I RG + D + C +L+K    +  + 
Sbjct: 521 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRIS 580

Query: 238 EAIELQNEMMGRGLL 252
           +A +L  +M   G +
Sbjct: 581 KATQLFLKMQKLGCM 595



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +I+ D+     +I  LC E K  ++  LL  M + G   + V  +TL+         SEA
Sbjct: 49  SIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEA 108

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD----FGL--HPNVAVY 118
             L   M         +T+  L+ GLC++G +  A+     M +    +G+   P +  Y
Sbjct: 109 TWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISY 168

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +IDGLCK    + AR LF EM  + M+PD  +YT+LI G+     +++A  L N M +
Sbjct: 169 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLD 228

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
           VG+  D+     L+    + G + EA  L   M+ RG + D +   +L+K    +  + E
Sbjct: 229 VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISE 288

Query: 239 AIEL 242
           A +L
Sbjct: 289 ATQL 292



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 99/210 (47%), Gaps = 6/210 (2%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           + L+D   K G+  EA  LL+ M+     + +VT+  LI GLC    + EA   F  M  
Sbjct: 58  SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 117

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEM---PKRDMI---PDTTAYTALIDGYLK 162
            G  P+   Y  L+ GLC+   I  A  L  EM     R  I   P   +Y+ +IDG  K
Sbjct: 118 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 177

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                EA  L   M   G+  D+ +YTSL+ G    G  ++A+ LF+EM+  GI PD   
Sbjct: 178 DRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTT 237

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              L+    + G + EA EL   M+ RG +
Sbjct: 238 SGVLIDMFCKEGKVIEANELLEVMVHRGCI 267



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 6/190 (3%)

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           + +++   I   V T  +LID LCK G V EA +    M   G   ++  Y+ LI GLC 
Sbjct: 42  IPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 101

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE------VGV 181
           ++ I  A  LF  M K    PD   Y  L+ G  +  +   AL L   M        +  
Sbjct: 102 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC 161

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
              L +Y+ ++ GL +     EAR LF EM  +G++PD I   SL+      G  ++A  
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221

Query: 242 LQNEMMGRGL 251
           L NEM+  G+
Sbjct: 222 LFNEMLDVGI 231



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 9/147 (6%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY---------TALIDGY 160
           GL P+   +  LI+ LC    +         + +R  IPD   Y         + LID  
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K     EA  L   M + G  LD+  Y++L+ GL     + EA  LF  M   G  PD 
Sbjct: 65  CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMM 247
           I   +L+K   + GN++ A++L  EM+
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEML 151


>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++     +  +I GLC E K  +   +   M   G   N  I T L+D Y K G 
Sbjct: 318 MDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGS 377

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D      VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 378 VEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSS 437

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   ++ A  LF+EM ++    D+  Y ALID + KH    EAL L  RM  E 
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEE 497

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G D  +  YT L+ G+ +    +EA  L+  MI +GI P      +L       G +  A
Sbjct: 498 GCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARA 557

Query: 240 IELQNEMMGRGLL 252
            ++ +E+   G++
Sbjct: 558 CKILDELAPMGVI 570



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 120/246 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   IK D+  Y T+I G C   + + +   L  M+  GL A+ +   T++ A +   +
Sbjct: 248 MESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSD 307

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S  ++L  EM +  ++V    F ++I GLCK G + E    F  M   G  PNVA+YT 
Sbjct: 308 FSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTV 367

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +E A  L   M      PD   Y+ +++G  K+   +EA++        G
Sbjct: 368 LIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNG 427

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + ++   Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAL 487

Query: 241 ELQNEM 246
            L   M
Sbjct: 488 ALFKRM 493



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           MK   I+  L  Y  ++ GL + + F DS   + E+ E+G +  + V   T++  Y KAG
Sbjct: 213 MKENGIEPTLYTYNFLMNGL-VSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAG 271

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  +AL  L  M    +E   +T+  +I            +  +  M + GL      ++
Sbjct: 272 QTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFS 331

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I GLCK+  +     +F+ M ++   P+   YT LIDGY K  S ++A+ L +RM + 
Sbjct: 332 LVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDE 391

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G + D+  Y+ +V GL + G ++EA   F      G+  + +   SL+    + G +DEA
Sbjct: 392 GFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEA 451

Query: 240 IELQNEMMGRG 250
             L  EM  +G
Sbjct: 452 ERLFEEMSEKG 462



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 113/250 (45%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K K    +L  Y +++  L +    +  + + SE+++           +L+ ++ K G  
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMV 203

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            E L +  +M ++ IE T+ T+  L++GL  +  V  A   F  M    + P+V  Y  +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTM 263

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I G CK    ++A      M  + +  D   Y  +I        F   + L   M E G+
Sbjct: 264 IKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGL 323

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            +  +A++ ++ GL + G L E   +F  MI +G  P+  +   L+  + + G++++AI 
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIR 383

Query: 242 LQNEMMGRGL 251
           L + M+  G 
Sbjct: 384 LLHRMIDEGF 393



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 2/205 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            Y ++I GL    + ++++ L  EM E G T ++     L+DA+ K G+  EAL+L   M
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRM 493

Query: 72  LDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
            +    + TV T+ +LI G+ K     EA+  +  M D G+ P  A   AL  GLC    
Sbjct: 494 EEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGK 553

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           + RA  + DE+    +I D  A   +I+   K    KEA  L + +TE G ++     T 
Sbjct: 554 VARACKILDELAPMGVILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTV 612

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRG 215
           ++  L + G    A  L H  IG G
Sbjct: 613 MINALRKVGKADLAMKLMHSKIGIG 637



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 92/207 (44%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +MKENG+         LM+    A     A  + + M   RI+  VVT+  +I G CK+G
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAG 271

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
             ++A++    M   GL  +   Y  +I      +       L+ EM ++ +     A++
Sbjct: 272 QTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFS 331

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +I G  K     E   +   M   G   ++  YT L+ G ++ G +++A  L H MI  
Sbjct: 332 LVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDE 391

Query: 215 GILPDEILCISLLKKHYERGNMDEAIE 241
           G  PD +    ++    + G ++EA++
Sbjct: 392 GFNPDVVTYSVVVNGLCKNGRVEEAMD 418


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  136 bits (342), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 139/287 (48%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G+NI         II GLC   +  +S+  L ++ + G     +    ++D + K G 
Sbjct: 529 MRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGS 588

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + AL++  EM    +   V T+  LI+G CKS  +  A+     M + G+  +V VY A
Sbjct: 589 VNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCA 648

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C+K  +  A  L  E+ +  + P+   Y+++I G+ K ++ + AL+L  RM   G
Sbjct: 649 LIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEG 708

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI--------LC--------- 223
           +  DL  YT+L+ GL + G L  A  L+ EM+ +GI+PD I        LC         
Sbjct: 709 IPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQ 768

Query: 224 ------------------ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                              +L+  H++ GN+ EA  L NEM+ +GL+
Sbjct: 769 KILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLV 815



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++  +  Y  +I G C +   + +  +  EM E GL  N +  + LMD YFK G+
Sbjct: 459 MVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGD 518

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L D M    I  +  T  ++I+GLCK+G   E+ D   ++   G  P    Y  
Sbjct: 519 TEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNC 578

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG  K+  +  A  ++ EM K  + P+   YT LI+G+ K  +   AL + + M   G
Sbjct: 579 IIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG 638

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++LD+  Y +L+ G  R G +  A  L  E+   G+ P++++  S++    +  NM+ A+
Sbjct: 639 IELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAAL 698

Query: 241 ELQNEMMGRGL 251
            L   M+  G+
Sbjct: 699 HLHKRMINEGI 709



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 130/250 (52%), Gaps = 1/250 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K K ++ D   Y  +I  +C +     +  LL EM++ G   + VI T ++    K G+ 
Sbjct: 251 KNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKM 310

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA+ +  EML     + VV    L+ G CK G +  A++ F +M + G+ PN   Y  +
Sbjct: 311 LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVI 370

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+  CK   +++A  ++++M  +D+ P      +LI GYLK  S +EA  L +     G+
Sbjct: 371 IEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI 430

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++  Y SL+  L + G + EA  ++ +M+ +G+ P  +   +++  H ++G+MD A  
Sbjct: 431 -ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANG 489

Query: 242 LQNEMMGRGL 251
           +  EM+ +GL
Sbjct: 490 VFVEMLEKGL 499



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 105/201 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I+ D+ +Y  +I G C +    ++  LLSE++E GL+ N V+ ++++  + K   
Sbjct: 634 MKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQN 693

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L   M++  I   +  +  LI GL K G +  A + +  M   G+ P++  Y+ 
Sbjct: 694 MEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSV 753

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC K  +E A+ + ++M ++ M P    Y  LI G+ K  + +EA  L N M + G
Sbjct: 754 LIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKG 813

Query: 181 VDLDLNAYTSLVWGLSRCGHL 201
           +  D   Y  LV G  + G+L
Sbjct: 814 LVPDDTTYDILVNGKVKDGNL 834



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 119/244 (48%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A++  Y +++  LC E K  ++  +  +M   G+  + V    ++  + + G+   A  +
Sbjct: 431 ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGV 490

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             EML+  ++  ++T+ VL+DG  K G    A   + RM    + P+      +I+GLCK
Sbjct: 491 FVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCK 550

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
                 +++   ++ +   IP    Y  +IDG++K  S   AL +   M ++GV  ++  
Sbjct: 551 AGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFT 610

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+L+ G  +  ++  A  +  EM  +GI  D  +  +L+     +G+M  A +L +E+ 
Sbjct: 611 YTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQ 670

Query: 248 GRGL 251
             GL
Sbjct: 671 EVGL 674



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 35/259 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II G   E     +  + +EM + G++ N    T L++ + K+     AL ++DEM 
Sbjct: 576 YNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMK 635

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------------------ 114
           +  IE+ V  +C LIDG C+ G +  A      + + GL PN                  
Sbjct: 636 NKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNME 695

Query: 115 -----------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                            + +YT LI GL K+  +  A  L+ EM  + ++PD   Y+ LI
Sbjct: 696 AALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLI 755

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G       + A  +   M    +   +  Y +L+ G  + G+LQEA  L +EM+ +G++
Sbjct: 756 HGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLV 815

Query: 218 PDEILCISLLKKHYERGNM 236
           PD+     L+    + GN+
Sbjct: 816 PDDTTYDILVNGKVKDGNL 834



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 4/210 (1%)

Query: 46  VICTTLMDAYF----KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           V C T+M+ +     K     EA  + ++M    ++    T  V+I    + G + EA  
Sbjct: 186 VPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEG 245

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
           +F    + G+  +   Y+ +I+ +CKK     A  L  EM  +  +P    +T +I   +
Sbjct: 246 WFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCM 305

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           K     EA+ +K  M   G  +++   T+L+ G  + G L  A  LF +M   GI P+ +
Sbjct: 306 KQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNV 365

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               +++   + GNMD+A E+ N+M  + +
Sbjct: 366 TYAVIIEWCCKNGNMDKAYEIYNQMKNKDI 395



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 6/188 (3%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           E+   LD   DSR+      F  L++   K+  + +A+D F  + +  + P + V    +
Sbjct: 143 ESSRRLDFESDSRV------FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFL 196

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
             L K N I  AR+++++M  + +  D    + +I   ++    +EA          GV+
Sbjct: 197 SELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVE 256

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD  AY+ ++  + +      A  L  EM  +G +P E++   ++    ++G M EA+++
Sbjct: 257 LDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKV 316

Query: 243 QNEMMGRG 250
           + EM+  G
Sbjct: 317 KGEMLSCG 324



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 23/197 (11%)

Query: 60  EPSEALSLLDEMLDSR-IEVTVVTFCVLIDGLCKS----GLVREAIDYFGRMPDFGLHPN 114
           +P  ALS        R +  +V   CVL+  L KS    G  R  ++ F    D+G  P+
Sbjct: 77  DPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFAS-DDWGPVPS 135

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           V V             IE +R L       D   D+  +  L++ Y+K +   +A++  N
Sbjct: 136 VVV----------ARLIESSRRL-------DFESDSRVFNYLLNSYVKTKRINDAVDCFN 178

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            + E  +   L      +  L +   ++EAR ++++M  +G+  D      +++     G
Sbjct: 179 SLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREG 238

Query: 235 NMDEAIELQNEMMGRGL 251
            ++EA     E   +G+
Sbjct: 239 KLEEAEGWFREAKNKGV 255


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE--- 60
           K ++AD+  Y T++ GLC   +FE  + +++EM E G   +    + L+D   K G    
Sbjct: 279 KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS 338

Query: 61  --------------PS------------------EALSLLDEMLDSRIEVTVVTFCVLID 88
                         PS                  EA SL + M    +    VT+ +LID
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
             CK G +  A+ + G+M + G+   V  Y++LI G CK   +  A++LFDEM    + P
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   YT+LI GY K      A  L + MT  G+  +   +T+L+ GL     + EA  LF
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            EM+   ++P+E+    L++ H + GN   A EL +EM+ +GL+
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 122/248 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K   +   L +Y  +I  +C + K ++++ L + M   GL  N V  + L+D++ K G+
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL  L +M +  I+ TV  +  LI G CK G +R A   F  M   GL PNV +YT+
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+  +  A  L+ EM  + + P+T  +TALI G        EA  L   M E  
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y  L+ G  + G+   A  L  EM+ +G++PD      L+      G + EA 
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585

Query: 241 ELQNEMMG 248
           E  N++ G
Sbjct: 586 EFMNDLQG 593



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+ +Y  ++  LC    F  ++ ++  M+ +G   +       +    K     EA+
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLC---------------------------------- 91
            + + +    +   V T+C L+ GLC                                  
Sbjct: 271 EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGL 330

Query: 92  -KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
            K G +  A D   ++  FG+ P++ VY ALI+ +CK   ++ A +LF+ M  + + P+ 
Sbjct: 331 RKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPND 390

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y+ LID + K      AL+   +MTEVG+   +  Y+SL+ G  + G L+ A+ LF E
Sbjct: 391 VTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDE 450

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           MI  G+ P+ ++  SL+  + + G +  A  L +EM G+G+
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 132/293 (45%), Gaps = 42/293 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I  +   +  +I GLC  ++  ++  L  EM E  +  N V    L++ + K G 
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF--------GLH 112
              A  LLDEM++  +     T+  LI GLC +G V EA ++   +           G  
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCL 605

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD----------------------- 149
           PNV  YTALI+GLCK   +++A  L  EM   + +P+                       
Sbjct: 606 PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 665

Query: 150 -----------TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
                      T  Y  LI G+ K    +EA  +   M + G+  D  +Y+++++   R 
Sbjct: 666 HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRR 725

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G L+EA  L+  M+ RG+ PD +    L+      G + +A EL+++MM RG+
Sbjct: 726 GDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGV 778



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 116/236 (49%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GL    +F  +  L  E+  +GL  +  + T ++ +  +  +   A  ++  M  S 
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
            +++V T+ V I GLCK+  V EA++    +   GL  +V  Y  L+ GLCK    E   
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            + +EM +   +P   A + L+DG  K  +   A +L N++ + GV   L  Y +L+  +
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + G L EA  LF+ M  +G+ P+++    L+    +RG +D A+    +M   G+
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 95/201 (47%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+  Y +     + L ++  M+D  I   + T   +++GL +    R A+  F  +   G
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG 210

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           L P+V VYTA++  LC+     RAR +   M           Y   I G  K++   EA+
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            +KN ++  G+  D+  Y +LV GL +    +    + +EMI  G +P E    +L+   
Sbjct: 271 EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGL 330

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            ++GN+  A +L N++   G+
Sbjct: 331 RKKGNIGSAFDLVNKVKKFGV 351



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 1/182 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC     + ++LL  EM  +    N       +D     G   +A+ L D +L
Sbjct: 611 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL 670

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +  TV T+ +LI G CK G ++EA +    M D G+ P+   Y+ +I   C++  ++
Sbjct: 671 EGFLANTV-TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK 729

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L++ M  R + PDT AY  LI G        +A  L++ M   GV  +   Y SL+
Sbjct: 730 EAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 789

Query: 193 WG 194
            G
Sbjct: 790 HG 791



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 66/132 (50%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A+   Y  +I G C   + +++  +L  M ++G++ + +  +T++  Y + G+  EA+ L
Sbjct: 675 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKL 734

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            + ML+  +    V +  LI G C +G + +A +    M   G+ PN A Y +LI G C 
Sbjct: 735 WESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCL 794

Query: 128 KNCIERARNLFD 139
            + +    + F 
Sbjct: 795 MSSVSSTADYFS 806



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 43/103 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D   Y TII+  C     +++  L   M   G+  +TV    L+      GE
Sbjct: 703 MIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGE 762

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
            ++A  L D+M+   ++    T+  LI G C    V    DYF
Sbjct: 763 LTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 137/262 (52%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  D+  Y  +I G C   K+ +++ LL EM    ++ + V  + L++A  K G+
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF----------- 109
            + A  LL EM+ S +   VVT   L+DGLC SG +++A++ F  M              
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y+++I+G  K     EA
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             + + M       ++  + +L+ G  + G + +   LF EM  RGI+ + I  I+L++ 
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ ++++  EM+  G+
Sbjct: 418 FRKVGNINGSLDIFQEMISSGV 439



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 122/254 (48%), Gaps = 11/254 (4%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I  D+  +  +I  L  E     ++ LL EM  +G+  N V C TL+D    +G+  +
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKD 275

Query: 64  ALSLLDEMLDSR-----------IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH 112
           AL +   M  S            +E  V T+ +LI GL   G   EA + +  MP  G+ 
Sbjct: 276 ALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 335

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P+   Y+++I+GLCK++ ++ A  +FD M  +   P+   +  LI GY K     + L L
Sbjct: 336 PDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M   G+  +   Y +L+ G  + G++  +  +F EMI  G+ PD I   ++L   + 
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWS 455

Query: 233 RGNMDEAIELQNEM 246
           +  + +A+ +  E+
Sbjct: 456 KEELKKALAMLEEL 469



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 118/250 (47%), Gaps = 5/250 (2%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  I  D+  +  +I   C  SK   +     ++ + G     V   TL+         S
Sbjct: 8   GLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVS 67

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL L  +M     +  VVTF  L++GLC+ G V EA+    RM + GL PN   Y  ++
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 123 DGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           DG+CK      A NL  +M +   I PD   Y+A+IDG  K     +A NL   M + G+
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D+  Y+ ++ G    G   EA+ L  EM+ R I PD +    L+    + G+++ A +
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 242 LQNEMMGRGL 251
           L  EM+  G+
Sbjct: 244 LLQEMISSGV 253



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 126/287 (43%), Gaps = 47/287 (16%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  + T++ GLC E +  ++  LL  M E+GL  N +   T++D   K G+   AL+
Sbjct: 78  KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 137

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I+  VV +  +IDGL K G   +A + F  M D G+ P++  Y+ +I+G 
Sbjct: 138 LLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGF 197

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV------ 179
           C       A+ L  EM  R + PD   ++ LI+  +K      A +L   M         
Sbjct: 198 CSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNV 257

Query: 180 ----------------------------------------GVDLDLNAYTSLVWGLSRCG 199
                                                   GV+ D+  Y  L+ GL   G
Sbjct: 258 VTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEG 317

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
              EA  L+ EM  RGI+PD +   S++    ++  +DEA ++ + M
Sbjct: 318 KFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM 364



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I GLC +S+ +++  +   M     + N V   TL+  Y KAG 
Sbjct: 329 MPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGM 388

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L L  EM    I    +T+  LI G  K G +  ++D F  M   G++P+      
Sbjct: 389 VDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRN 448

Query: 121 LIDGLCKKNCIERARNLFDEM 141
           ++ GL  K  +++A  + +E+
Sbjct: 449 MLTGLWSKEELKKALAMLEEL 469


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 137/262 (52%), Gaps = 11/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  D+  Y  +I G C   K+ +++ LL EM    ++ + V  + L++A  K G+
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF----------- 109
            + A  LL EM+ S +   VVT   L+DGLC SG +++A++ F  M              
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+V  Y  LI GL  +     A  L++EMP R ++PDT  Y+++I+G  K     EA
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             + + M       ++  + +L+ G  + G + +   LF EM  RGI+ + I  I+L++ 
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             + GN++ ++++  EM+  G+
Sbjct: 418 FRKVGNINGSLDIFQEMISSGV 439



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 11/254 (4%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I  D+  +  +I  L  E     ++ LL EM  +G+  N V C TL+D    +G+  +
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKD 275

Query: 64  ALSLLDEMLDSR-----------IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH 112
           AL +   M  S            +E  V T+ +LI GL   G   EA + +  MP  G+ 
Sbjct: 276 ALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 335

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P+   Y+++I+GLCK++ ++ A  +FD M  +   P+   +  LI GY K     + L L
Sbjct: 336 PDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M   G+  +   Y +L+ G  + G++  +  +F EMI  G+ PD I   ++L   + 
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWS 455

Query: 233 RGNMDEAIELQNEM 246
           +  +  A+ +  E+
Sbjct: 456 KEELKRALAMLEEL 469



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 118/250 (47%), Gaps = 5/250 (2%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  I  D+  +  +I   C  SK   +     ++ + G     V   TL+         S
Sbjct: 8   GLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVS 67

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL L  +M     +  VVTF  L++GLC+ G V EA+    RM + GL PN   Y  ++
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 123 DGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           DG+CK      A NL  +M +   I PD   Y+A+IDG  K     +A NL   M + G+
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D+  Y+ ++ G    G   EA+ L  EM+ R I PD +    L+    + G+++ A +
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 242 LQNEMMGRGL 251
           L  EM+  G+
Sbjct: 244 LLQEMISSGV 253



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 126/287 (43%), Gaps = 47/287 (16%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  + T++ GLC E +  ++  LL  M E+GL  N +   T++D   K G+   AL+
Sbjct: 78  KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALN 137

Query: 67  LLDEMLD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           LL +M + S I+  VV +  +IDGL K G   +A + F  M D G+ P++  Y+ +I+G 
Sbjct: 138 LLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGF 197

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV------ 179
           C       A+ L  EM  R + PD   ++ LI+  +K      A +L   M         
Sbjct: 198 CSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNV 257

Query: 180 ----------------------------------------GVDLDLNAYTSLVWGLSRCG 199
                                                   GV+ D+  Y  L+ GL   G
Sbjct: 258 VTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEG 317

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
              EA  L+ EM  RGI+PD +   S++    ++  +DEA ++ + M
Sbjct: 318 KFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM 364



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 67/141 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I GLC +S+ +++  +   M     + N V   TL+  Y KAG 
Sbjct: 329 MPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGM 388

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L L  EM    I    +T+  LI G  K G +  ++D F  M   G++P+      
Sbjct: 389 VDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRN 448

Query: 121 LIDGLCKKNCIERARNLFDEM 141
           ++ GL  K  ++RA  + +E+
Sbjct: 449 MLTGLWSKEELKRALAMLEEL 469


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 125/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +  +Y  +I G C + K + + L    M E G+         L+ A F  G  +EA 
Sbjct: 213 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 272

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L++EM    +   V T+ +LI+G CK G V++A++ F  M   G+   V  YTALI  L
Sbjct: 273 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYAL 332

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            KK  ++    LFDE  +R + PD   Y ALI+ +    +   A  +   M +  +  D 
Sbjct: 333 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 392

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL   G + EAR L  EM  RGI PD +   +L+  +  +G++ +A+ ++NE
Sbjct: 393 VTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 452

Query: 246 MMGRGL 251
           MM +G 
Sbjct: 453 MMNKGF 458



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 120/236 (50%), Gaps = 2/236 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y T+I G C   + + +  ++ EM+E  G+  N     T++  + K G   EA+ + DEM
Sbjct: 148 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 207

Query: 72  L-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           L    ++   V +  LI G C  G +  A+ Y  RM + G+   VA Y  L+  L     
Sbjct: 208 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 267

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A  L +EM  + + PD   Y  LI+G+ K  + K+AL +   M+  GV   +  YT+
Sbjct: 268 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 327

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L++ LS+ G +QE   LF E + RGI PD +L  +L+  H   GN+D A E+  EM
Sbjct: 328 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 108/228 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  Y  +I G C E   + +  +   M   G+ A  V  T L+ A  K G+
Sbjct: 278 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 337

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L DE +   I   +V +  LI+    SG +  A +  G M    + P+   Y  
Sbjct: 338 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 397

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    ++ AR L DEM +R + PD   Y  LI GY      K+AL ++N M   G
Sbjct: 398 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 457

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
            +  L  Y +L+ GL + G   +A  +  EM+  GI PD+   ISL++
Sbjct: 458 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 505



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 104/211 (49%), Gaps = 10/211 (4%)

Query: 47  ICTTLMDAYFK----AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +CTT  +   +    AG+P+ AL LL +M         VT+  +I G C  G V+ A+D 
Sbjct: 112 LCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDI 167

Query: 103 FGRMPDFG-LHPNVAVYTALIDGLCKKNCIERARNLFDEM-PKRDMIPDTTAYTALIDGY 160
              M + G + PN   Y  +I G CK   ++ A  +FDEM  K ++ P+   Y ALI GY
Sbjct: 168 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 227

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
                   AL  ++RM E GV + +  Y  LV  L   G   EA  L  EM G+G+ PD 
Sbjct: 228 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 287

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                L+  H + GN+ +A+E+   M  RG+
Sbjct: 288 FTYNILINGHCKEGNVKKALEIFENMSRRGV 318



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   +  Y  ++  L ++ +  ++  L+ EM   GL  +      L++ + K G 
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 302

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + + M    +  TVVT+  LI  L K G V+E    F      G+ P++ +Y A
Sbjct: 303 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 362

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+       I+RA  +  EM K+ + PD   Y  L+ G        EA  L + MTE G
Sbjct: 363 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 422

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y +L+ G S  G +++A  + +EM+ +G  P  +   +L++   + G  D+A 
Sbjct: 423 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 482

Query: 241 ELQNEMMGRGL 251
            +  EM+  G+
Sbjct: 483 NMVKEMVENGI 493



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++A +  Y  +I+ L  + + +++  L  E    G+  + V+   L++++  +G 
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  ++ EM   RI    VT+  L+ GLC  G V EA      M + G+ P++  Y  
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G   K  ++ A  + +EM  +   P    Y ALI G  K+    +A N+   M E G
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 492

Query: 181 VDLDLNAYTSLVWGLS 196
           +  D + Y SL+ GL+
Sbjct: 493 ITPDDSTYISLIEGLT 508


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 123/242 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GLC     ++   L   M+EN +  +    + L+    K G    A  L DEM 
Sbjct: 261 FNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQ 320

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +    +TF  LIDG C+S  +  A++ + +M   G+ P++ +Y  L++GLCK   + 
Sbjct: 321 QRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVN 380

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +AR L DEM    M PD   YT LIDGY K    + A+ ++  M E GV LD  A+T+L+
Sbjct: 381 KARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALI 440

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  R G +++A     EM+  G+ PD+     ++  + ++GN+    +L  EM   G  
Sbjct: 441 SGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHK 500

Query: 253 SG 254
            G
Sbjct: 501 PG 502



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 119/221 (53%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
             SE+ E G          L++ + K G   +A  + +E+    +  T V+F  LI+GLC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KS  + E       M +  ++P+V  Y+ LI GLCK+  ++ A  LFDEM +R + P+  
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +TALIDG  +      A+N  ++M  +GV  DL  Y +L+ GL + G + +AR L  EM
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              G+ PD+I   +L+  + + G+++ A+E++  M   G++
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 125/280 (44%), Gaps = 35/280 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  D+  Y  +I GLC E + + ++ L  EM++ GL  N +  T L+D   ++  
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRR 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A++   +ML   ++  +V +  L++GLCK G V +A      M   G+ P+   YT 
Sbjct: 344 IDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTT 403

Query: 121 LIDGLCKKNCIERARNL-----------------------------------FDEMPKRD 145
           LIDG CK+  +E A  +                                     EM +  
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           M PD   YT +IDGY K  + K    L   M   G    +  Y  L+ GL + G ++ A 
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAN 523

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
           +L   M+  G+ PD+I    LL+ H + G  ++ ++L+NE
Sbjct: 524 MLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 101/212 (47%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   +  +   LM AY+ +G  S+A+     + +S  ++       L+D +  S      
Sbjct: 148 GTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTI 207

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
             ++  + ++G  P V  Y  LI+  CK+  I  A+ +F+E+ KR + P T ++  LI+G
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K  +  E   LK  M E  +  D+  Y+ L+ GL + G L  A  LF EM  RG+ P+
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            I   +L+        +D A+   ++M+  G+
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGV 359


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 131/246 (53%), Gaps = 1/246 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+ LY ++I G C E   E +  L  EM  NG+  N V+  TL++   K GE ++A 
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L DE+ +  +   VVT+  +IDG CKSG + EA   F  M   G+ P+  +Y  LIDG 
Sbjct: 717 ELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 776

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K+  +E+A +LF E  ++  +   +A+ +LID + KH    EA  L + M +  +  ++
Sbjct: 777 GKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI 835

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT L+    +   ++EA  LF +M  R I+P+ +   SLL  + + GN  + I L  +
Sbjct: 836 VTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 895

Query: 246 MMGRGL 251
           M  RG+
Sbjct: 896 MEARGI 901



 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 132/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  DL  Y  +I GLC   K E++K+LL +M E G+  N       ++ Y K+GE
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     +ML S I    V + +LI G C  G   EA+  F  M + GL P++  Y+A
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L K    + A  +F +  K  ++PD   Y +LI G+ K    ++A  L + M   G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y +L+ GL + G + +AR LF E+  + ++PD +   +++  + + GN+ EA 
Sbjct: 692 INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751

Query: 241 ELQNEMMGRGL 251
           +L +EM+ +G+
Sbjct: 752 KLFDEMISKGI 762



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 120/216 (55%), Gaps = 1/216 (0%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E  +  +    T ++ A+ K G+  +   +L EM +   +  + T+   I GLC++G 
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGA 291

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           V EA++    M + GL P+   YT L+DG CK+   + A+ +F+ MP   + P+   YTA
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LIDG++K  + +EAL +K+ M   G+ L++  Y +++ G+++ G + +A  LF+EM+  G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + PD      L+  + +  +M +A EL  EM  R L
Sbjct: 412 LEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +      Y  +I GLC  S  + +  +L +M  NG+  N  +  TL+ AY +   
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ LL  M+ + +   +  +  LI GLC++  V EA      M + G+ PN   Y A
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+   K   I+ A   F +M    ++P+   YT LI G+    +  EAL+    M E G
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ AY++++  LS+ G  +EA  +F + +  G++PD  L  SL+    + G++++A 
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681

Query: 241 ELQNEMMGRGL 251
           +L +EM+  G+
Sbjct: 682 QLYDEMLHNGI 692



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 116/249 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K +L  Y   I GLC     +++  +   M E GL  +    T L+D + K     E
Sbjct: 270 KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  + + M  S +     T+  LIDG  K G + EA+     M   GL  NV  Y A+I 
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G+ K   + +A +LF+EM    + PDT  Y  LIDGYLK     +A  L   M    +  
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
               Y+ L+ GL     LQ+A  +  +MI  G+ P+  +  +L+K + +    + AIEL 
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509

Query: 244 NEMMGRGLL 252
             M+  G+L
Sbjct: 510 KIMIANGVL 518



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 1/227 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y  ++ G C + + +++KL+   M  +GL  N    T L+D + K G 
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL + DEM+   +++ VVT+  +I G+ K+G + +A+  F  M   GL P+   Y  
Sbjct: 362 IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNL 421

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K + + +A  L  EM  R + P    Y+ LI G       ++A  + ++M   G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           V  ++  Y +L+    +    + A  L   MI  G+LPD + C + L
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD-LFCYNCL 527



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 35/275 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G   E   E++  +  EM   GL  N V    ++    KAGE ++A+SL +EML
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + +E    T+ +LIDG  KS  + +A +    M    L P+   Y+ LI GLC  + ++
Sbjct: 409 MAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + D+M +  + P+   Y  LI  Y++   ++ A+ L   M   GV  DL  Y  L+
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 193 WGLSRCGHLQEARVL-----------------------------------FHEMIGRGIL 217
            GL R   ++EA++L                                   F +M+  GI+
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           P+ ++   L+K H + GN  EA+     M+ +GL+
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLI 623



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 128/247 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K ++ +YGT+I     ES++E +  LL  M  NG+  +      L+    +A +  EA 
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL +M +  I+    T+   I+   KSG ++ A  YF  M   G+ PN  +YT LI G 
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A + F  M ++ +IPD  AY+A+I    K+   KEA+ +  +  + GV  D+
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL+ G  + G +++A  L+ EM+  GI P+ ++  +L+    + G + +A EL +E
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDE 721

Query: 246 MMGRGLL 252
           +  + L+
Sbjct: 722 IEEKDLV 728



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 128/319 (40%), Gaps = 69/319 (21%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            I  ++ +Y T+I GLC   +   ++ L  E++E  L  + V  +T++D Y K+G  +EA 
Sbjct: 692  INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAF 751

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDG----------------------------------LC 91
             L DEM+   I      +C+LIDG                                   C
Sbjct: 752  KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFC 811

Query: 92   KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
            K G V EA + F  M D  L PN+  YT LID   K   +E A  LF +M  R++IP+T 
Sbjct: 812  KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 871

Query: 152  AYTALI-----------------------------------DGYLKHESFKEALNLKNRM 176
             YT+L+                                     Y K     EAL L N+ 
Sbjct: 872  TYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKS 931

Query: 177  TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
               G+ L+ + + +L++ L +   +     L  EM    +      C +LL   Y+ GN 
Sbjct: 932  LVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE 991

Query: 237  DEAIELQNEMMGRGLLSGS 255
            DEA ++   M   G +  S
Sbjct: 992  DEASKVLGVMQRLGWVPTS 1010



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 1/209 (0%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +N  +    +D +   G  +EA S+    +      T++    L+  L K+ ++      
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV 229

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +G M +  + P+V  YT +I   CK   + + + +  EM K +  P+   Y A I G  +
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQ 288

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             +  EAL +K  M E G+  D + YT LV G  +    +EA+++F  M   G+ P+   
Sbjct: 289 TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+    + GN++EA+ +++EM+ RGL
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGL 377



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 77/180 (42%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K +  ++  Y  +I         E+++ L  +M+   +  NT+  T+L+ +Y + G 
Sbjct: 826  MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              + +SL  +M    I    + + V+    CK G   EA+    +    G+     V+ A
Sbjct: 886  RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDA 945

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LI  LCK+  I     L  EM K ++   +     L+ G+ K  +  EA  +   M  +G
Sbjct: 946  LIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLG 1005



 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 51/123 (41%)

Query: 32   LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
            L  +M+  G+  + +    +  AY K G+  EAL LL++ L   I++    F  LI  LC
Sbjct: 892  LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC 951

Query: 92   KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
            K   +   ++    M    L  +      L+ G  K    + A  +   M +   +P + 
Sbjct: 952  KEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSL 1011

Query: 152  AYT 154
            + T
Sbjct: 1012 SLT 1014


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  136 bits (342), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 134/258 (51%), Gaps = 6/258 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+  + +Y T+I GLC ESK  +++ +  +MK++G+  N      LMD Y K   
Sbjct: 212 MVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTAN 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L   MLD  ++  VVTF +LID LCK   +  A  +F +M  FG+ PNV V+ +
Sbjct: 272 VKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNS 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K      A +L  EM K  + PD   Y+ LI    +  + +EA ++  RM + G
Sbjct: 332 LIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEG 391

Query: 181 VDLDLNAYTSLVWGLSRCGHLQ------EARVLFHEMIGRGILPDEILCISLLKKHYERG 234
           V  +   Y SL+ G  + G+++      +A   F +M   G+ PD +    +L+ H    
Sbjct: 392 VPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAK 451

Query: 235 NMDEAIELQNEMMGRGLL 252
           +M + + L  +M+  G++
Sbjct: 452 HMADVMMLHADMIKMGIV 469



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 122/230 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++   C +     +K L+SEM + G+    VI TTL+       +  EA S+  +M 
Sbjct: 189 YNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMK 248

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           DS +   + T+ VL+DG CK+  V++A+  +  M D GL PNV  +  LID LCK   + 
Sbjct: 249 DSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELL 308

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR  F +M K  ++P+   + +LIDGY K  +  EA +L   M +  +  D+  Y+ L+
Sbjct: 309 AARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILI 368

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
               R G ++EA  +   M   G+  + ++  SL+  + + GNM++A+E+
Sbjct: 369 KNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEI 418



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 101/199 (50%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  L++   K         L + M+  R+  TVVT+ VL+D  C+ G V  A      M 
Sbjct: 154 CNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMV 213

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             G+ P V +YT LI GLC ++ +  A ++F +M    + P+   Y  L+DGY K  + K
Sbjct: 214 KKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVK 273

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +AL+L   M + G+  ++  +  L+  L +   L  AR  F +M   G++P+ ++  SL+
Sbjct: 274 QALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLI 333

Query: 228 KKHYERGNMDEAIELQNEM 246
             + + GN  EA +L  EM
Sbjct: 334 DGYSKAGNCSEATDLLLEM 352



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 111/237 (46%)

Query: 19  GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
           GL  +S F+    L + M    L    V    L+DA  + G+   A SL+ EM+   IE 
Sbjct: 160 GLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEP 219

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           TVV +  LI GLC    + EA   F +M D G+ PN+  Y  L+DG CK   +++A +L+
Sbjct: 220 TVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLY 279

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
             M    + P+   +  LID   K      A     +M + GV  ++  + SL+ G S+ 
Sbjct: 280 QGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKA 339

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           G+  EA  L  EM    I PD      L+K     G ++EA ++   M   G+ + S
Sbjct: 340 GNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANS 396



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 5/190 (2%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S   + L ++  S+   +V  F VLI    + GLV EA+  + ++   G  P V    AL
Sbjct: 103 SLVFNALSQLRGSKFNPSV--FGVLIIAFSEVGLVDEALRVYLKV---GAFPAVQACNAL 157

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++GL KK+  +    L++ M  R + P    Y  L+D   +      A +L + M + G+
Sbjct: 158 LNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGI 217

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           +  +  YT+L+ GL     L EA  +F +M   G+ P+      L+  + +  N+ +A+ 
Sbjct: 218 EPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALH 277

Query: 242 LQNEMMGRGL 251
           L   M+  GL
Sbjct: 278 LYQGMLDDGL 287



 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 81/214 (37%), Gaps = 41/214 (19%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++  +G +I  LC   +   ++    +M + G+  N V+  +L+D Y KAG  SEA 
Sbjct: 287 LQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEAT 346

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID------------------------ 101
            LL EM   +I   V T+ +LI   C+ G V EA D                        
Sbjct: 347 DLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGY 406

Query: 102 -----------------YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
                            +F  M   GL P+   Y  ++ G      +     L  +M K 
Sbjct: 407 CKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKM 466

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            ++P+      +  GY  +   K AL     +TE
Sbjct: 467 GIVPNEVTSQVVRRGYQDNGYLKSALWCSRDLTE 500


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 123/217 (56%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+ ++G   N      LM+   K G+  +A  + DE+  + ++ T V+F  LI+G CKSG
Sbjct: 222 EILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSG 281

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + E       M +F + P+V  Y+ALIDGLCK+  +E A +LF EM  R ++P+   +T
Sbjct: 282 NLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFT 341

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LI+G  K+     AL +  +M   G+  DL  Y +L+ GL + G+ +EAR    EM  R
Sbjct: 342 TLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKR 401

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G++PD+    +LL    + G+++ A+E++ EM+  G+
Sbjct: 402 GLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGI 438



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 127/277 (45%), Gaps = 35/277 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  LC E K +D++L+  E+++ GL    V   TL++ Y K+G   E   L   M 
Sbjct: 235 FNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVME 294

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------------------ 114
           + R+   V T+  LIDGLCK   + +A   F  M D GL PN                  
Sbjct: 295 EFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVD 354

Query: 115 -----------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                            + +Y  LIDGLCK      AR    EM KR +IPD   YT L+
Sbjct: 355 LALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLL 414

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DG  K    + AL ++  M + G+ LD  A+T+++ GL R G + +A     EM+  G+ 
Sbjct: 415 DGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLK 474

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           PD+     ++    ++G++    +L  EM   G + G
Sbjct: 475 PDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPG 511



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 129/280 (46%), Gaps = 38/280 (13%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I GLC E + ED+  L  EM + GL  N V  TTL++   K G    AL + 
Sbjct: 301 DVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIY 360

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M    ++  +V +  LIDGLCK G  REA  + G M   GL P+   YT L+DG CK+
Sbjct: 361 QQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKE 420

Query: 129 NCIERARNLFDEMPK------------------------------RDMI-----PDTTAY 153
             +E A  +  EM K                              R+M+     PD   Y
Sbjct: 421 GDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTY 480

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           T ++DG+ K    K    L   M   G    +  Y  L+ GL + G ++ A +L + M+ 
Sbjct: 481 TMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLN 540

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
            G++PD+I    LL+ H + G + +   ++ EM   GL+S
Sbjct: 541 LGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVS 577



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 110/227 (48%), Gaps = 3/227 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +KADL LY T+I GLC    F +++  + EM + GL  +    TTL+D   K G+
Sbjct: 363 MFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGD 422

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  EM+   I++  V F  +I GLC+ G + +A      M   GL P+   YT 
Sbjct: 423 LELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTM 482

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG CKK  ++    L  EM     IP    Y  L++G  K    K A  L N M  +G
Sbjct: 483 VMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLG 542

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           V  D   Y  L+ G  + G L + + +  EM   G++ D     SLL
Sbjct: 543 VVPDDITYNILLQGHCKHGKLGDFQNVKTEM---GLVSDYASYRSLL 586


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 125/241 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D  L+  ++  L    + ++++ +  +M++ G   + +   T++D   KAG   EAL
Sbjct: 221 VPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEAL 280

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +LD ML      T VT+ +L++ LCK+G +  A + F  M   G  PN  +YT+LI G 
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF 340

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   ++ A +LFDEM +    PD   +T +IDG  K  +F++A      M   G   ++
Sbjct: 341 AKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNV 400

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+++ GLS+ G +  A  +   MI  G  PD +  I LL    + G +DEA +L +E
Sbjct: 401 VTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460

Query: 246 M 246
           +
Sbjct: 461 L 461



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 114/239 (47%), Gaps = 1/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG ++  LC     E ++ L   M  +G   N+VI T+L+  + K+G   EA SL DEM+
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++     V+T  V+IDGLCKSG   +A   F  M   G  PNV  YT +I GL K   + 
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +   M      PD+  Y  L+DG+ K     EA  L + + +     +L  Y+SLV
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 193 WGLSRCGHLQEA-RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL   G ++     LF +        D  LC S++    + G +DEA  +   M+  G
Sbjct: 478 KGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 3/247 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + D+  Y  ++  L  E  +     +  EM + G+  NT     L+ ++ +     +A+
Sbjct: 115 FQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAV 174

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDG 124
           +  + M   R +  + TF +L+D LCK+G+  +A + F  M   G + P+ A++TA++  
Sbjct: 175 TCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRT 234

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN-LKNRMTEVGVDL 183
           L K   ++ AR +F +M K    PD  AY  +IDG  K    +EAL  L N + +  V  
Sbjct: 235 LLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPT 294

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y  LV  L + G L+ A  LF  M   G  P+ ++  SL+    + G M EA  L 
Sbjct: 295 EVT-YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 244 NEMMGRG 250
           +EM+  G
Sbjct: 354 DEMVEAG 360



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 114/253 (45%), Gaps = 9/253 (3%)

Query: 9   DLPLYGTIIWGLC----IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +L LY +++ GLC    +E+  +D   L  + K      +  +C +++    K G   EA
Sbjct: 469 NLQLYSSLVKGLCDGGSVENTLDD---LFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEA 525

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKS--GLVREAIDYFGRMPDFGLHPNVAVYTALI 122
             +   M+    +    T+ +LI+GLC+S    V  A      +   G  P+   YT L 
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLC 585

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GLCK   ++RA  + +E   R    D  AYTAL  G         A++L   M   G  
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D  AY  ++ GL +   L++A   F EMIG+G  P      +L++     GN+DEA   
Sbjct: 646 PDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR 705

Query: 243 QNEMMGRGLLSGS 255
              M+ RG L GS
Sbjct: 706 FEGMLARGELVGS 718



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTA-NTVICTTLMDAYFKAG 59
           MK K  K DL  +  ++  LC     E +  +  EM   G    +  + T ++    KA 
Sbjct: 180 MKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAK 239

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA  +  +M         + +  +IDGL K+G  +EA+     M      P    Y 
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L++ LCK   +ERA  LF  M      P++  YT+LI G+ K    KEA +L + M E 
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  +T ++ GL + G+ ++A   F EM+  G  P+ +   ++++   + G +  A
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419

Query: 240 IELQNEMMGRGLLSGS 255
             +   M+  G    S
Sbjct: 420 FRIMKGMIAHGCFPDS 435



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 109/253 (43%), Gaps = 3/253 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCI--ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
           M  +  K D   Y  +I GLC   E++ E +  LL +++  G   + V  T L     K 
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKI 591

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           GE   A+ +L+E         VV +  L  GLC  G V  A+  F  M   G  P+ A Y
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             +I+GL K   +E A   FDEM  +   P    YTAL+       +  EA +    M  
Sbjct: 652 CCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLA 711

Query: 179 VGVDL-DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
            G  +  +  Y +L+ G  +   +  A  LF +MI RG +P  +   SL       G  +
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771

Query: 238 EAIELQNEMMGRG 250
           +A EL  EM   G
Sbjct: 772 KAQELLQEMAAGG 784



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 3/245 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP--SEALS 66
           D  L  +II GLC   + +++  +   M   G   +      L++   ++ E     A +
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL ++         VT+  L  GLCK G V  A+         G + +V  YTAL  GLC
Sbjct: 565 LLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLC 624

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            +  ++RA +LF EM ++   PD  AY  +I+G +K +  ++A    + M   G    + 
Sbjct: 625 YQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVA 684

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG-NMDEAIELQNE 245
            YT+LV  L   G++ EA   F  M+ RG L   ++    L   + +   +D A++L  +
Sbjct: 685 TYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFED 744

Query: 246 MMGRG 250
           M+ RG
Sbjct: 745 MISRG 749



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 1/191 (0%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           AD+  Y  +  GLC + + + +  L  EM   G   +      +++   K  +  +A   
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKF 670

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDGLC 126
            DEM+    + TV T+  L+  LC +G V EA   F  M   G L  +V +Y ALI G C
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFC 730

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   ++ A  LF++M  R  +P      +L DG ++    ++A  L   M   G      
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAA 790

Query: 187 AYTSLVWGLSR 197
            +T+++ GL +
Sbjct: 791 TFTAILDGLRK 801



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 71/166 (42%), Gaps = 3/166 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y  II GL    K ED+     EM   G        T L+ A   AG   EA    
Sbjct: 647 DAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706

Query: 69  DEMLDSRIEV--TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           + ML +R E+  +V+ +  LI G CK+  V  A+  F  M   G  P      +L DGL 
Sbjct: 707 EGML-ARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLV 765

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           +    E+A+ L  EM      P    +TA++DG  K +   + L L
Sbjct: 766 RSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 1/130 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M GK  K  +  Y  ++  LC     +++      M   G L  + +I   L+  + KA 
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKAL 733

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +   AL L ++M+      T VT   L DGL +SG   +A +    M   G  P+ A +T
Sbjct: 734 KVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFT 793

Query: 120 ALIDGLCKKN 129
           A++DGL K +
Sbjct: 794 AILDGLRKSD 803



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 1/138 (0%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G   +V  Y  L++ L  +    +   + +EM K  + P+T ++  LI  + +     +A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL-PDEILCISLLK 228
           +     M       DL+ +  LV  L + G  ++A  +FHEM+  G + PD  L  ++++
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 229 KHYERGNMDEAIELQNEM 246
              +   + EA E+  +M
Sbjct: 234 TLLKAKRVKEAREVFGQM 251


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 116/221 (52%), Gaps = 5/221 (2%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK D+  Y ++I+GLC  ++ +++  LL  +K  G   + ++ +TL+D   KAG+  EA 
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 421

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L + M     +  VVT+  LIDGLCK+G V EA     RM   G  P+   Y +LI GL
Sbjct: 422 DLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 481

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL----KNRMTEV-G 180
           C  N ++ A  L +EM + +  P    Y  LI G  + E    A+ L    K R     G
Sbjct: 482 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGG 541

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
             LD  AY+SL+ GL + G + EA   F EMI  G++PD I
Sbjct: 542 TALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHI 582



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 125/238 (52%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  Y +++ GLC   +  D+  L+ +M   G T N V   TL+D   K G   +A ++L
Sbjct: 260 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 319

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+D      ++ + +LI+GLCK+  V E+I    R    G+ P+V  Y+++I GLC+ 
Sbjct: 320 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 379

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A  L   +  R   PD   Y+ LIDG  K     EA +L   M   G D D+  Y
Sbjct: 380 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTY 439

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           ++L+ GL + G + EA +L   M+  G  P  +   SL+K   +  ++DEAIEL  EM
Sbjct: 440 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC  ++   +  LL  MK  G + + +  T L+D   K  + + A  +L EML
Sbjct: 194 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 253

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+     +VT+  L+ GLC++  V +A+     M   G  PNV  Y  LIDGLCK   ++
Sbjct: 254 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 313

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +  +M  +   PD   Y  LI+G  K +   E++ L  R    G+  D+  Y+S++
Sbjct: 314 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 373

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +GL R   L EA  L   +  RG  PD IL  +L+    + G +DEA +L   M G G
Sbjct: 374 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 131/258 (50%), Gaps = 7/258 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    + ++  Y ++I GLC  ++ + ++ L   MK    + + V   TL+D  F+ G+
Sbjct: 105 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 164

Query: 61  PSEALSLLDEMLD-------SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
              A++L  EMLD        R    V+T+ VLIDGLCK+  V +A++    M   G  P
Sbjct: 165 LERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSP 224

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           +V  YT L+DGLCK++ +  A  +  EM     +P+   Y +L+ G  +     +AL L 
Sbjct: 225 DVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALM 284

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
             MT  G   ++  Y +L+ GL + G +++A  +  +MI +G  PD ++   L+    + 
Sbjct: 285 RDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKA 344

Query: 234 GNMDEAIELQNEMMGRGL 251
             +DE+I L    +  G+
Sbjct: 345 DQVDESIALLRRAVSGGI 362



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 125/257 (48%), Gaps = 7/257 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ KN+  ++ L   +I GLC   +  D+      M+ +G+ A+TVI T L+   +K   
Sbjct: 35  MRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKR 94

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL++L EM D   E  VVT+  LIDGLCK+     A + F  M      P++  Y  
Sbjct: 95  LDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNT 154

Query: 121 LIDGLCKKNCIERARNLFDEMPKR---DM----IPDTTAYTALIDGYLKHESFKEALNLK 173
           L+DGL +   +ERA  LF EM  R   DM     P+   Y+ LIDG  K     +A+ L 
Sbjct: 155 LLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELL 214

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
             M   G   D+  YT LV GL +   +  A  +  EM+  G +P+ +   SLL      
Sbjct: 215 ESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRA 274

Query: 234 GNMDEAIELQNEMMGRG 250
             + +A+ L  +M  RG
Sbjct: 275 RRVSDALALMRDMTCRG 291



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 121/254 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    ++  YGT+I GLC   + +D+  +L++M + G T + +I   L++   KA +
Sbjct: 287 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 346

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+++LL   +   I+  VVT+  +I GLC+S  + EA      +   G  P+V +Y+ 
Sbjct: 347 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 406

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   ++ A +L++ M       D   Y+ LIDG  K     EA  L  RM  +G
Sbjct: 407 LIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 466

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                  Y SL+ GL    HL EA  L  EM      P  +    L+        +D A+
Sbjct: 467 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAV 526

Query: 241 ELQNEMMGRGLLSG 254
            L  +   R + +G
Sbjct: 527 VLLEQAKARCVAAG 540



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 112/251 (44%), Gaps = 7/251 (2%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y  ++ G C   + + ++    EM+   L  N  +C+ L+D   KA    +AL 
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
               M  S I    V +  L+ GL K   + +A+     M D G  PNV  Y +LIDGLC
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE-VGVDLD- 184
           K N  +RA+ LF+ M   +  P    Y  L+DG  +    + A+ L   M +    D+D 
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 185 -----LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
                +  Y+ L+ GL +   + +A  L   M  RG  PD I    L+    +   +  A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 240 IELQNEMMGRG 250
            E+  EM+  G
Sbjct: 246 WEVLREMLDAG 256



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 6/221 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K +    D+ LY T+I GLC   K +++  L   M  +G  A+ V  +TL+D   KAG 
Sbjct: 392 VKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGR 451

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M+      + +T+  LI GLC    + EAI+    M      P+   Y  
Sbjct: 452 VDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI 511

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIP-----DTTAYTALIDGYLKHESFKEALNLKNR 175
           LI G+C+   ++ A  L ++   R +       DT AY++LIDG  K     EAL+    
Sbjct: 512 LIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQE 571

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEAR-VLFHEMIGRG 215
           M + GV  D   Y+ L+ GL +   L E R ++  +M+  G
Sbjct: 572 MIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 612


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 134/274 (48%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I GLC   +  ++K LL EM    L  N V+   L+D + + G   EA  ++ EM+
Sbjct: 317 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 376

Query: 73  DSRIEVTVVTFCVLIDGLCKSG-----------LVRE----------------------- 98
            + ++   +T+  L+ GLCK G           +VR+                       
Sbjct: 377 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 436

Query: 99  -AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            A      M + G+ PNV  Y+ +I GLC+    E+A +L +EM  + + P+   Y  LI
Sbjct: 437 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 496

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            GY +  +   A  + ++MT+V V  DL  Y SL++GLS+ G ++E+   F +M  RG+L
Sbjct: 497 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 556

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P+E     L+  + + G+++ A +L   M+  GL
Sbjct: 557 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 590



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 130/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ +   Y  ++ GLC   + + + LLL +M  +    +T+    +++ +F+   
Sbjct: 375 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 434

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL EM ++ I   V T+ ++I GLC+SG   +A D    M   GL PN  VY  
Sbjct: 435 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 494

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C++  +  A  +FD+M K +++PD   Y +LI G  K    +E+     +M E G
Sbjct: 495 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 554

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y+ L+ G  + G L+ A  L   M+  G+ P++++ I LL+ +++  ++++  
Sbjct: 555 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 614

Query: 241 ELQNEMMGRGLL 252
                M+ +G++
Sbjct: 615 STFKSMLDQGVM 626



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 118/234 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC     E++     +M++ GL  +      L++   K+   +EA +LLDEM 
Sbjct: 282 YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 341

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + ++  VV +  LIDG  + G   EA      M   G+ PN   Y  L+ GLCK   ++
Sbjct: 342 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 401

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  L  +M +    PDT  Y  +I+G+ +H S K+A  L + M   G+  ++  Y+ ++
Sbjct: 402 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMI 461

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL + G  ++A  L  EM  +G+ P+  +   L+  +   GN+  A E+ ++M
Sbjct: 462 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 515



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 118/228 (51%), Gaps = 4/228 (1%)

Query: 28  DSKLLLSEMKE----NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           D+  LL +++E     G++ +    +TL++AY K  E   A  +L EM +    +  VT+
Sbjct: 223 DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTY 282

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            VLI GLC+SG V EA  +   M D+GL P+   Y ALI+GLCK      A+ L DEM  
Sbjct: 283 NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC 342

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
            ++ P+   Y  LIDG+++  +  EA  +   M   GV  +   Y +LV GL + G +  
Sbjct: 343 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 402

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A +L  +M+     PD I    +++ H+   +  +A  L +EM   G+
Sbjct: 403 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGI 450



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 127/278 (45%), Gaps = 36/278 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE----PSEALSLL 68
           Y  +I G       E ++ L+  M + GL  N VI   L+++YFK+ +     S   S+L
Sbjct: 562 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 621

Query: 69  DE--MLDSRIEVTVV-----------------------------TFCVLIDGLCKSGLVR 97
           D+  MLD+RI   ++                              +  LI GLCK+    
Sbjct: 622 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 681

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +A      M   G+ PN+  Y ALIDGLCK   I  ARN+F+ +  + ++P+   YT+LI
Sbjct: 682 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 741

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DG  K      A  L N M   G+  D   Y+ L  G S  G L++A  L  EM  RG  
Sbjct: 742 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 801

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
                  +L+    +RG M E ++L + +MGRGL+  +
Sbjct: 802 SISSFN-NLVDGFCKRGKMQETLKLLHVIMGRGLVPNA 838



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  DL  Y ++I+GL    + E+S    ++M+E GL  N    + L+  Y K G+
Sbjct: 515 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 574

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+  MLD+ ++   V +  L++   KS  + +    F  M D G+  +  +Y  
Sbjct: 575 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 634

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L     +E A  +   + K   +PD   Y++LI G  K    ++A  + + M++ G
Sbjct: 635 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 694

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           VD ++  Y +L+ GL + G +  AR +F+ ++ +G++P+ +   SL+    + G++  A 
Sbjct: 695 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 754

Query: 241 ELQNEMMGRGL 251
            L NEM+  G+
Sbjct: 755 YLYNEMLATGI 765



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 5/249 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D  +YG +I  L      E +  +LS +++NG   +  + ++L+    K  +
Sbjct: 620 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTAD 679

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +LDEM    ++  +V +  LIDGLCKSG +  A + F  +   GL PN   YT+
Sbjct: 680 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 739

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   I  A  L++EM    + PD   Y+ L  G       ++A+ L   M   G
Sbjct: 740 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 799

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA- 239
               ++++ +LV G  + G +QE   L H ++GRG++P+ +   +++    E G + E  
Sbjct: 800 -HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 858

Query: 240 ---IELQNE 245
              +ELQ +
Sbjct: 859 TIFVELQQK 867



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 5/233 (2%)

Query: 15  TIIWGLCIESKF-----EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           TI + L IE  F     +D+  LLSEM+  G++ N    + ++    ++GEP +A  LL+
Sbjct: 419 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 478

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM    ++     +  LI G C+ G V  A + F +M    + P++  Y +LI GL K  
Sbjct: 479 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 538

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +E +   F +M +R ++P+   Y+ LI GYLK+   + A  L  RM + G+  +   Y 
Sbjct: 539 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 598

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            L+    +   +++    F  M+ +G++ D  +   L+      GNM+ A  +
Sbjct: 599 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 651



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  ++  Y  +I GLC   + E +  LL EM   GL  N  +   L+  Y + G 
Sbjct: 445 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 504

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  + D+M    +   +  +  LI GL K G V E+  YF +M + GL PN   Y+ 
Sbjct: 505 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 564

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K   +E A  L   M    + P+   Y  L++ Y K +  ++  +    M + G
Sbjct: 565 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 624

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V LD   Y  L+  LS  G+++ A  +   +   G +PD  +  SL+    +  + ++A 
Sbjct: 625 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 684

Query: 241 ELQNEMMGRGL 251
            + +EM  +G+
Sbjct: 685 GILDEMSKKGV 695



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 102/223 (45%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + +D+  ++  M++ G+  +   C  L+    +A   +    + + M+ + I   V T+ 
Sbjct: 189 RVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYS 248

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            LI+  CK      A      M + G   N   Y  LI GLC+   +E A     +M   
Sbjct: 249 TLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY 308

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            ++PD   Y ALI+G  K     EA  L + M+   +  ++  Y +L+ G  R G+  EA
Sbjct: 309 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 368

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             +  EM+  G+ P++I   +L++   + G MD A  L  +M+
Sbjct: 369 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 411



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 19/253 (7%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C      ++  L +EM   G+T +  + + L      AG+  +A+ L++EM 
Sbjct: 737 YTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMF 796

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             R   ++ +F  L+DG CK G ++E +     +   GL PN      +I GL +   + 
Sbjct: 797 -LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLS 855

Query: 133 RARNLFDEMPKR--------------DMIPDTTAYTALIDG----YLKHESFKEALNLKN 174
               +F E+ ++              DMI        ++D     + K  +  +AL L++
Sbjct: 856 EVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRD 915

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            +      +  ++Y ++V  L R G L EA  L  EM  RGI P E  C+ LL   +  G
Sbjct: 916 VIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSG 975

Query: 235 NMDEAIELQNEMM 247
            + E   + + M+
Sbjct: 976 YIQEHNTVLDNML 988



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VL+D   KSG V++A +    M D G+ P++    AL+  L + + +     + + M   
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 238

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   Y+ LI+ Y K   F  A  +   M E G  L+   Y  L+ GL R G ++EA
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
                +M   G++PD     +L+    +    +EA  L +EM
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 340



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 58/141 (41%)

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
           H + AV   L+D   K   ++ A  +   M  R M P      AL+   L+ ++      
Sbjct: 171 HRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWK 230

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
           ++  M   G+  D+  Y++L+    +      A+ +  EM  RG   + +    L+    
Sbjct: 231 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 290

Query: 232 ERGNMDEAIELQNEMMGRGLL 252
             G ++EA   + +M   GL+
Sbjct: 291 RSGAVEEAFGFKKDMEDYGLV 311


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 126/246 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +  +Y  +I G C + K + + L    M E G+         L+ A F  G  +EA 
Sbjct: 253 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 312

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L++EM    + + V T+ +LI+G CK G V++A++ F  M   G+   V  YT+LI  L
Sbjct: 313 ELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYAL 372

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            KK  ++    LFDE  +R + PD   Y ALI+ +    +   A  +   M +  +  D 
Sbjct: 373 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 432

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL   G + EAR L  EM  RGI PD +   +L+  +  +G++ +A+ ++NE
Sbjct: 433 VTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 492

Query: 246 MMGRGL 251
           MM +G 
Sbjct: 493 MMNKGF 498



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 2/236 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y T+I G C   + + +  ++ EM+E  G+  N     T++  + K G   EA+ + DEM
Sbjct: 188 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 247

Query: 72  L-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           L    ++   V +  LI G C  G +  A+ Y  RM + G+   VA Y  L+  L     
Sbjct: 248 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 307

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A  L +EM  + +  D   Y  LI+G+ K  + K+AL +   M+  GV   +  YTS
Sbjct: 308 GTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 367

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L++ LS+ G +QE   LF E + RGI PD +L  +L+  H   GN+D A E+  EM
Sbjct: 368 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 109/228 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  Y  +I G C E   + +  +   M   G+ A  V  T+L+ A  K G+
Sbjct: 318 MGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ 377

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L DE +   I   +V +  LI+    SG +  A +  G M    + P+   Y  
Sbjct: 378 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 437

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    ++ AR L DEM KR + PD   Y  LI GY      K+AL ++N M   G
Sbjct: 438 LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 497

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
            +  L  Y +L+ GL + G   +A  +  EM+  GI PD+   ISL++
Sbjct: 498 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 545



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 103/211 (48%), Gaps = 10/211 (4%)

Query: 47  ICTTLMDAYFK----AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +CTT  +   +    AG+P+ AL LL +M         VT+  +I G C  G V+ A+D 
Sbjct: 152 LCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDI 207

Query: 103 FGRMPDFG-LHPNVAVYTALIDGLCKKNCIERARNLFDEM-PKRDMIPDTTAYTALIDGY 160
              M + G + PN   Y  +I G CK   ++ A  +FDEM  K ++ P+   Y ALI GY
Sbjct: 208 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 267

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
                   AL  ++RM E GV + +  Y  LV  L   G   EA  L  EM G+G+  D 
Sbjct: 268 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDV 327

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                L+  H + GN+ +A+E+   M  RG+
Sbjct: 328 FTYNILINGHCKEGNVKKALEIFENMSRRGV 358



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++A +  Y ++I+ L  + + +++  L  E    G+  + V+   L++++  +G 
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  ++ EM   RI    VT+  L+ GLC  G V EA      M   G+ P++  Y  
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 472

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G   K  ++ A  + +EM  +   P    Y ALI G  K+    +A N+   M E G
Sbjct: 473 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 532

Query: 181 VDLDLNAYTSLVWGLS 196
           +  D + Y SL+ GL+
Sbjct: 533 ITPDDSTYISLIEGLT 548


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 125/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +  +Y  +I G C + K + + L    M E G+         L+ A F  G  +EA 
Sbjct: 140 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 199

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L++EM    +   V T+ +LI+G CK G V++A++ F  M   G+   V  YT+LI  L
Sbjct: 200 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYAL 259

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            KK  ++    LFDE  +R + PD   Y ALI+ +    +   A  +   M +  +  D 
Sbjct: 260 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 319

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL   G + EAR L  EM  RGI PD +   +L+  +  +G++ +A+ ++NE
Sbjct: 320 VTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 379

Query: 246 MMGRGL 251
           MM +G 
Sbjct: 380 MMNKGF 385



 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 120/236 (50%), Gaps = 2/236 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y T+I G C   + + +  ++ EM+E G +  N     T++  + K G   EA+ + DEM
Sbjct: 75  YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 134

Query: 72  L-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           L    ++   V +  LI G C  G +  A+ Y  RM + G+   VA Y  L+  L     
Sbjct: 135 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 194

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A  L +EM  + + PD   Y  LI+G+ K  + K+AL +   M+  GV   +  YTS
Sbjct: 195 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTS 254

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L++ LS+ G +QE   LF E + RGI PD +L  +L+  H   GN+D A E+  EM
Sbjct: 255 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 310



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 109/228 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  Y  +I G C E   + +  +   M   G+ A  V  T+L+ A  K G+
Sbjct: 205 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ 264

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L DE +   I   +V +  LI+    SG +  A +  G M    + P+   Y  
Sbjct: 265 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 324

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    ++ AR L DEM KR + PD   Y  LI GY      K+AL ++N M   G
Sbjct: 325 LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 384

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
            +  L  Y +L+ GL + G   +A  +  EM+  GI PD+   ISL++
Sbjct: 385 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 432



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 104/211 (49%), Gaps = 10/211 (4%)

Query: 47  ICTTLMDAYFK----AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +CTT  +   +    AG+P+ AL LL +M         VT+  +I G C  G V+ A+D 
Sbjct: 39  LCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDI 94

Query: 103 FGRMPDFG-LHPNVAVYTALIDGLCKKNCIERARNLFDEM-PKRDMIPDTTAYTALIDGY 160
              M + G + PN   Y  +I G CK   ++ A  +FDEM  K ++ P+   Y ALI GY
Sbjct: 95  MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 154

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
                   AL  ++RM E GV + +  Y  LV  L   G   EA  L  EM G+G+ PD 
Sbjct: 155 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 214

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                L+  H + GN+ +A+E+   M  RG+
Sbjct: 215 FTYNILINGHCKEGNVKKALEIFENMSRRGV 245



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++A +  Y ++I+ L  + + +++  L  E    G+  + V+   L++++  +G 
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  ++ EM   RI    VT+  L+ GLC  G V EA      M   G+ P++  Y  
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 359

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G   K  ++ A  + +EM  +   P    Y ALI G  K+    +A N+   M E G
Sbjct: 360 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 419

Query: 181 VDLDLNAYTSLVWGLS 196
           +  D + Y SL+ GL+
Sbjct: 420 ITPDDSTYISLIEGLT 435


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE--- 60
           K ++AD+  Y T++ GLC   +FE  + +++EM E G   +    + L+D   K G    
Sbjct: 279 KGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS 338

Query: 61  --------------PS------------------EALSLLDEMLDSRIEVTVVTFCVLID 88
                         PS                  EA SL + M    +    VT+ +LID
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
             CK G +  A+ + G+M + G+   V  Y++LI G CK   +  A++LFDEM    + P
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   YT+LI GY K      A  L + MT  G+  +   +T+L+ GL     + EA  LF
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            EM+   ++P+E+    L++ H + GN   A EL +EM+ +GL+
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLV 562



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 122/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C   K + +   L +M E G+ A     ++L+  + K G+   A SL DEM+
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMI 452

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + ++  VV +  LI G CK G +  A   +  M   G+ PN   +TALI GLC  N + 
Sbjct: 453 ANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMA 512

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM + ++IP+   Y  LI+G+ K  +   A  L + M E G+  D   Y  L+
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL   G + EAR   +++ G     +E+   +LL  + + G +D+A++   EM+GRG+
Sbjct: 573 SGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 127/282 (45%), Gaps = 35/282 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IKA +  Y ++I G C   K   +K L  EM  NGL  N VI T+L+  Y K GE   A 
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM    I     TF  LI GLC +  + EA   FG M ++ + PN   Y  LI+G 
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAY-------------------------------- 153
           CK+    RA  L DEM ++ ++PDT  Y                                
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600

Query: 154 ---TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
              +AL+ GY K     +AL+    M   GV +DL  Y+ L++G+ R    +    L  +
Sbjct: 601 MCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQ 660

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           M  +G+ PD +L  +++  + + GN+  A  L + M+  G L
Sbjct: 661 MHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCL 702



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 122/248 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K   +   L +Y  +I  +C + K ++++ L + M   GL  N V  + L+D++ K G+
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL  L +M +  I+ TV  +  LI G CK G +R A   F  M   GL PNV +YT+
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+  +  A  L+ EM  + + P+T  +TALI G        EA  L   M E  
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y  L+ G  + G+   A  L  EM+ +G++PD      L+      G + EA 
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585

Query: 241 ELQNEMMG 248
           E  N++ G
Sbjct: 586 EFMNDLQG 593



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 129/281 (45%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+ +Y  ++  LC    F  ++ ++  M+ +G   +       +    K     EA+
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLC---------------------------------- 91
            + + +    +   V T+C L+ GLC                                  
Sbjct: 271 EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGL 330

Query: 92  -KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
            K G +  A D   ++  FG+ P++ VY ALI+ +CK   ++ A +LF+ M  + + P+ 
Sbjct: 331 RKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPND 390

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y+ LID + K      AL+   +MTEVG+   +  Y+SL+ G  + G L+ A+ LF E
Sbjct: 391 VTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDE 450

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           MI  G+ P+ ++  SL+  + + G +  A  L +EM G+G+
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ +  DL  Y  +I+G+  +        LL +M + GL  + V+ TT++DA  KAG 
Sbjct: 626 MLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGN 685

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L D M+       VVT+  LI+GLCK GL+ +A      M      PN   Y  
Sbjct: 686 LKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 745

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +D L  +  IE+A  L D + +   + +T  Y  LI G+ K    +EA  +   M + G
Sbjct: 746 FLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 804

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D  +Y+++++   R G L+EA  L+  M+ RG+ PD +    L+      G + +A 
Sbjct: 805 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 864

Query: 241 ELQNEMMGRGL 251
           EL+++MM RG+
Sbjct: 865 ELRDDMMRRGV 875



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 123/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++G+  K +   +  ++ G C E + +D+     EM   G+  + V  + L+    +  +
Sbjct: 591 LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD 650

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL +M D  +    V +  +ID   K+G ++ A   +  M   G  PNV  YTA
Sbjct: 651 RRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTA 710

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +++A  L  EM   + +P+   Y   +D      + ++A+ L + + E G
Sbjct: 711 LINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-G 769

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y  L+ G  + G +QEA  +   MI  GI PD I   +++ ++  RG++ EAI
Sbjct: 770 FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAI 829

Query: 241 ELQNEMMGRGL 251
           +L   M+ RG+
Sbjct: 830 KLWESMLNRGV 840



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 124/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I  +   +  +I GLC  ++  ++  L  EM E  +  N V    L++ + K G 
Sbjct: 486 MTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGN 545

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LLDEM++  +     T+  LI GLC +G V EA ++   +       N   ++A
Sbjct: 546 TVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSA 605

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK+  ++ A +   EM  R +  D   Y+ LI G L+ +  +  ++L  +M + G
Sbjct: 606 LLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG 665

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT+++   ++ G+L+ A  L+  M+  G LP+ +   +L+    + G MD+A 
Sbjct: 666 LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAE 725

Query: 241 ELQNEMMGRGLL 252
            L  EM+    L
Sbjct: 726 LLCREMLASNSL 737



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 116/236 (49%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GL    +F  +  L  E+  +GL  +  + T ++ +  +  +   A  ++  M  S 
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSG 245

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
            +++V T+ V I GLCK+  V EA++    +   GL  +V  Y  L+ GLCK    E   
Sbjct: 246 CDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGE 305

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            + +EM +   +P   A + L+DG  K  +   A +L N++ + GV   L  Y +L+  +
Sbjct: 306 EMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSM 365

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + G L EA  LF+ M  +G+ P+++    L+    +RG +D A+    +M   G+
Sbjct: 366 CKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGI 421



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 95/201 (47%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+  Y +     + L ++  M+D  I   + T   +++GL +    R A+  F  +   G
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG 210

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           L P+V VYTA++  LC+     RAR +   M           Y   I G  K++   EA+
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            +KN ++  G+  D+  Y +LV GL +    +    + +EMI  G +P E    +L+   
Sbjct: 271 EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGL 330

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            ++GN+  A +L N++   G+
Sbjct: 331 RKKGNIGSAFDLVNKVKKFGV 351



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 1/182 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC     + ++LL  EM  +    N       +D     G   +A+ L D +L
Sbjct: 708 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL 767

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +  TV T+ +LI G CK G ++EA +    M D G+ P+   Y+ +I   C++  ++
Sbjct: 768 EGFLANTV-TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLK 826

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L++ M  R + PDT AY  LI G        +A  L++ M   GV  +   Y SL+
Sbjct: 827 EAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886

Query: 193 WG 194
            G
Sbjct: 887 HG 888



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 62/119 (52%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A+   Y  +I G C   + +++  +L  M ++G++ + +  +T++  Y + G+  EA+ L
Sbjct: 772 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKL 831

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
            + ML+  +    V +  LI G C +G + +A +    M   G+ PN A Y +LI G C
Sbjct: 832 WESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score = 37.7 bits (86), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 41/101 (40%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D   Y TII+  C     +++  L   M   G+  +TV    L+      GE
Sbjct: 800 MIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGE 859

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
            ++A  L D+M+   ++    T+  LI G C    V    D
Sbjct: 860 LTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 134/274 (48%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I GLC   +  ++K LL EM    L  N V+   L+D + + G   EA  ++ EM+
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 354

Query: 73  DSRIEVTVVTFCVLIDGLCKSG-----------LVRE----------------------- 98
            + ++   +T+  L+ GLCK G           +VR+                       
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414

Query: 99  -AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            A      M + G+ PNV  Y+ +I GLC+    E+A +L +EM  + + P+   Y  LI
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 474

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            GY +  +   A  + ++MT+V V  DL  Y SL++GLS+ G ++E+   F +M  RG+L
Sbjct: 475 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 534

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P+E     L+  + + G+++ A +L   M+  GL
Sbjct: 535 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 568



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 130/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ +   Y  ++ GLC   + + + LLL +M  +    +T+    +++ +F+   
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 412

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL EM ++ I   V T+ ++I GLC+SG   +A D    M   GL PN  VY  
Sbjct: 413 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 472

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C++  +  A  +FD+M K +++PD   Y +LI G  K    +E+     +M E G
Sbjct: 473 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 532

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y+ L+ G  + G L+ A  L   M+  G+ P++++ I LL+ +++  ++++  
Sbjct: 533 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 592

Query: 241 ELQNEMMGRGLL 252
                M+ +G++
Sbjct: 593 STFKSMLDQGVM 604



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 118/234 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC     E++     +M++ GL  +      L++   K+   +EA +LLDEM 
Sbjct: 260 YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 319

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + ++  VV +  LIDG  + G   EA      M   G+ PN   Y  L+ GLCK   ++
Sbjct: 320 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 379

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  L  +M +    PDT  Y  +I+G+ +H S K+A  L + M   G+  ++  Y+ ++
Sbjct: 380 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMI 439

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL + G  ++A  L  EM  +G+ P+  +   L+  +   GN+  A E+ ++M
Sbjct: 440 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 493



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 126/275 (45%), Gaps = 36/275 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE----PSEALSLL 68
           Y  +I G       E ++ L+  M + GL  N VI   L+++YFK+ +     S   S+L
Sbjct: 540 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 599

Query: 69  DE--MLDSRIEVTVV-----------------------------TFCVLIDGLCKSGLVR 97
           D+  MLD+RI   ++                              +  LI GLCK+    
Sbjct: 600 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 659

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +A      M   G+ PN+  Y ALIDGLCK   I  ARN+F+ +  + ++P+   YT+LI
Sbjct: 660 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 719

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DG  K      A  L N M   G+  D   Y+ L  G S  G L++A  L  EM  RG  
Sbjct: 720 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 779

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                  +L+    +RG M E ++L + +MGRGL+
Sbjct: 780 SISSFN-NLVDGFCKRGKMQETLKLLHVIMGRGLV 813



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 104/202 (51%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           + ++AY K  E   A  +L EM +    +  VT+ VLI GLC+SG V EA  +   M D+
Sbjct: 227 SALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY 286

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           GL P+   Y ALI+GLCK      A+ L DEM   ++ P+   Y  LIDG+++  +  EA
Sbjct: 287 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 346

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             +   M   GV  +   Y +LV GL + G +  A +L  +M+     PD I    +++ 
Sbjct: 347 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEG 406

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
           H+   +  +A  L +EM   G+
Sbjct: 407 HFRHHSKKDAFRLLSEMENAGI 428



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  DL  Y ++I+GL    + E+S    ++M+E GL  N    + L+  Y K G+
Sbjct: 493 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 552

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+  MLD+ ++   V +  L++   KS  + +    F  M D G+  +  +Y  
Sbjct: 553 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 612

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L     +E A  +   + K   +PD   Y++LI G  K    ++A  + + M++ G
Sbjct: 613 LIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 672

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           VD ++  Y +L+ GL + G +  AR +F+ ++ +G++P+ +   SL+    + G++  A 
Sbjct: 673 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 732

Query: 241 ELQNEMMGRGL 251
            L NEM+  G+
Sbjct: 733 YLYNEMLATGI 743



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 125/249 (50%), Gaps = 5/249 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D  +YG +I  L      E +  +LS +++NG   +  + ++L+    K  +
Sbjct: 598 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTAD 657

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +LDEM    ++  +V +  LIDGLCKSG +  A + F  +   GL PN   YT+
Sbjct: 658 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 717

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   I  A  L++EM    + PD   Y+ L  G       ++A+ L   M   G
Sbjct: 718 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 777

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA- 239
               ++++ +LV G  + G +QE   L H ++GRG++P+ +   +++    E G + E  
Sbjct: 778 -HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 836

Query: 240 ---IELQNE 245
              +ELQ +
Sbjct: 837 TIFVELQQK 845



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 5/233 (2%)

Query: 15  TIIWGLCIESKF-----EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           TI + L IE  F     +D+  LLSEM+  G++ N    + ++    ++GEP +A  LL+
Sbjct: 397 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 456

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM    ++     +  LI G C+ G V  A + F +M    + P++  Y +LI GL K  
Sbjct: 457 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 516

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +E +   F +M +R ++P+   Y+ LI GYLK+   + A  L  RM + G+  +   Y 
Sbjct: 517 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 576

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            L+    +   +++    F  M+ +G++ D  +   L+      GNM+ A  +
Sbjct: 577 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 629



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  ++  Y  +I GLC   + E +  LL EM   GL  N  +   L+  Y + G 
Sbjct: 423 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 482

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  + D+M    +   +  +  LI GL K G V E+  YF +M + GL PN   Y+ 
Sbjct: 483 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 542

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K   +E A  L   M    + P+   Y  L++ Y K +  ++  +    M + G
Sbjct: 543 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 602

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V LD   Y  L+  LS  G+++ A  +   +   G +PD  +  SL+    +  + ++A 
Sbjct: 603 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 662

Query: 241 ELQNEMMGRGL 251
            + +EM  +G+
Sbjct: 663 GILDEMSKKGV 673



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 18/175 (10%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A +  +  ++ G C   K +++  LL  +   GL  N +    ++    +AG+ SE  ++
Sbjct: 779 ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI 838

Query: 68  LDEMLDSRIEVTVVTFCVL------------------IDGLCKSGLVREAIDYFGRMPDF 109
             E+     E     F  L                  I   CK G + +A+     +   
Sbjct: 839 FVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAK 898

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
                 + Y A++D LC+K  +  A NL  EM KR  +  T      I  + +H 
Sbjct: 899 SAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFWFRRHH 953


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 125/250 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +NI  DL  Y +++ GL    + E++  + ++M E G   + V  T+LMD   K G+
Sbjct: 729 MKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK 788

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL +   M   R    VVT+  LID L K G V EA  +F      G  PNV VY++
Sbjct: 789 LSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSS 848

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   KK  ++RA  LF+EM +R   P+   Y  L+ G  K      A  L   M +VG
Sbjct: 849 LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y  L+ G+ + G + EA   F  M  +GI+PD I   SL++   +   + EA 
Sbjct: 909 CVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEAC 968

Query: 241 ELQNEMMGRG 250
           EL + M   G
Sbjct: 969 ELFDSMEEEG 978



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 125/228 (54%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ GL    + +++  LL EM++ G   + V  ++LM +++K  +  E+LSL DEM+
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  V T+ ++I+ LCKS  V +A+D FGRM + G+ P +  Y  L+  L K   I+
Sbjct: 626 RKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKID 685

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F+E+ +  ++PDT  Y  +++G +K     EA  L + M    +  DL  YTSL+
Sbjct: 686 FALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLL 745

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            GL + G L+EA  +F +M   G  PD +   SL+    + G +  A+
Sbjct: 746 DGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHAL 793



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 114/229 (49%), Gaps = 1/229 (0%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K    D+  Y ++I  L  E + E++          G T N  + ++L+D++ K G 
Sbjct: 799  MAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGM 858

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               AL L +EM   +    +VT+  L+ GL K+G +  A      M   G  P++  Y  
Sbjct: 859  VDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNI 918

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LIDG+ K   ++ A + F  M ++ ++PD   +T+LI+   K +   EA  L + M E G
Sbjct: 919  LIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEG 978

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             +  +  Y  L+  L R G + EA ++FHEM  +G +PD I  I ++K+
Sbjct: 979  YNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGI-TIGIMKR 1026



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 102/200 (51%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
            + ++ ++G    A   + EM+ S I+  V TF VLID L KSG + EA  +F  M +  
Sbjct: 293 FVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR 352

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PNV  YT L++GL K   +E A  +F EM + +  PD  AY  LIDG  K      A 
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMAC 412

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   M + G+  +L  Y  ++  L + G   EA  LFH++  +G +PD     +L+   
Sbjct: 413 GLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVL 472

Query: 231 YERGNMDEAIELQNEMMGRG 250
            + G MD+ + +  EM+ +G
Sbjct: 473 GKGGQMDKVLAIIKEMVEKG 492



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 122/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + ++  L  Y T++  L  + K + +  + +E++E+ L  +T +   +++   K+  
Sbjct: 659 MKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNR 718

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+D M +  I   + T+  L+DGL KSG + EA + F +M + G  P+V  YT+
Sbjct: 719 VDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTS 778

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D L K   +  A  +F  M K+  +PD   Y++LID   K    +EA          G
Sbjct: 779 LMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y+SL+    + G +  A  LF EM  R   P+ +   +LL    + G ++ A 
Sbjct: 839 CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898

Query: 241 ELQNEM 246
           +L  EM
Sbjct: 899 KLLEEM 904



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 120/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K   AD+  Y  +I  LC     + +  +   MKE G+        TL+ +  K  +
Sbjct: 624 MVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEK 683

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL + +E+ +S +      + ++++GL KS  V EA      M +  + P++  YT+
Sbjct: 684 IDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTS 743

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGL K   +E A N+F +M +    PD  AYT+L+D   K      AL +   M +  
Sbjct: 744 LLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKR 803

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y+SL+  L + G ++EA   F   I +G  P+  +  SL+    ++G +D A+
Sbjct: 804 CVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRAL 863

Query: 241 ELQNEMMGR 249
           EL  EM  R
Sbjct: 864 ELFEEMQRR 872



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 107/203 (52%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           TLM A+   G   EA+ LL+ M       TVVT+  L+DGL K+G + EA+     M   
Sbjct: 533 TLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQ 592

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G  P+V  Y++L+    K++  E + +LFDEM ++  + D + Y+ +I+   K +   +A
Sbjct: 593 GCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQA 652

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           L++  RM E G++  L  Y +L+  L +   +  A  +F+E+    ++PD  +   ++  
Sbjct: 653 LDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNG 712

Query: 230 HYERGNMDEAIELQNEMMGRGLL 252
             +   +DEA +L + M  + +L
Sbjct: 713 LVKSNRVDEACKLVDSMKNQNIL 735



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 114/244 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  +Y  ++ GL   ++ +++  L+  MK   +  +    T+L+D   K+G   EA ++ 
Sbjct: 702 DTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMF 761

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M +   E  VV +  L+D L K G +  A+  F  M      P+V  Y++LID L K+
Sbjct: 762 TKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKE 821

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A   F+    +   P+   Y++LID + K      AL L   M       ++  Y
Sbjct: 822 GRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTY 881

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ GL++ G L  A  L  EM   G +PD +    L+    + G +DEA      M  
Sbjct: 882 NNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKE 941

Query: 249 RGLL 252
           +G++
Sbjct: 942 KGIV 945



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 31/284 (10%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      ++  Y T++ GL    + E++  +  EMKEN  + + +   TL+D   KAGE
Sbjct: 348 MKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGE 407

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EM D  +   + T+ ++I  L K+G   EA   F  + + G  P+V  Y  
Sbjct: 408 ADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNT 467

Query: 121 LIDGLCKKNCIERARNLFDEMPKRD----MIPDTTA------------------------ 152
           LID L K   +++   +  EM ++     +  D+ A                        
Sbjct: 468 LIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLG 527

Query: 153 ---YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  L+  ++ +    EA+ L   M +      +  YT+LV GL + G L EA  L  
Sbjct: 528 EITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLR 587

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           EM  +G  P  +   SL+   Y+R   +E++ L +EM+ +G ++
Sbjct: 588 EMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVA 631



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D   +   +       + + +   + EM ++G+       T L+DA  K+G   EA 
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              + M + R    VVT+  L++GL K+G + EA + F  M +    P+   Y  LIDGL
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K    + A  LF EM  R ++P+   Y  +I    K     EA  L + + E G   D+
Sbjct: 403 GKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDV 462

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
             Y +L+  L + G + +   +  EM+ +G
Sbjct: 463 FTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 6/222 (2%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           + ++MK  G   +T +   +++   K G    A+ +  ++   RI+    TF + +    
Sbjct: 239 IFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFN 298

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           +SG +  A +    M   G+ P V  +T LID L K   I+ A   F+ M      P+  
Sbjct: 299 RSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVV 358

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT L++G  K    +EA  +   M E     D  AY +L+ GL + G    A  LF EM
Sbjct: 359 TYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEM 418

Query: 212 IGRGILPD---EILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             RG++P+     + IS+L K    G   EA +L +++  +G
Sbjct: 419 KDRGLVPNLRTYNIMISVLGK---AGRQPEAWQLFHDLKEQG 457



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 99/221 (44%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+ M + G   +  + T+L+  +      S AL + ++M       +   +  +++ L 
Sbjct: 204 ILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLV 263

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G    A+  FG++  F + P+   +   +    +   ++ A     EM K  + P   
Sbjct: 264 KGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVH 323

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +T LID  +K  +  EA    N M  +    ++  YT+LV GL++ G L+EA  +F EM
Sbjct: 324 TFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEM 383

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                 PD I   +L+    + G  D A  L  EM  RGL+
Sbjct: 384 KENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLV 424



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 106/269 (39%), Gaps = 31/269 (11%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  L      +++    + MK    + N V  TTL++   KAG   EA  +  EM 
Sbjct: 325 FTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMK 384

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++      + +  LIDGL K+G    A   F  M D GL PN+  Y  +I  L K     
Sbjct: 385 ENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQP 444

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG----VDLDLNA- 187
            A  LF ++ ++  +PD   Y  LID   K     + L +   M E G    +  D NA 
Sbjct: 445 EAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAG 504

Query: 188 --------------------------YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
                                     Y +L+      GH+ EA  L   M     +P  +
Sbjct: 505 HEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVV 564

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRG 250
              +L+    + G +DEA+ L  EM  +G
Sbjct: 565 TYTTLVDGLGKAGRLDEAVSLLREMEKQG 593



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 120/283 (42%), Gaps = 31/283 (10%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  +L  Y  +I  L    +  ++  L  ++KE G   +     TL+D   K G+
Sbjct: 418 MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQ 477

Query: 61  PSEALSLLDEMLDSRIEVTV-------------------------------VTFCVLIDG 89
             + L+++ EM++   E  +                               +T+  L+  
Sbjct: 478 MDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSA 537

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
              +G V EA+     M      P V  YT L+DGL K   ++ A +L  EM K+   P 
Sbjct: 538 FIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPS 597

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y++L+  + K +  +E+L+L + M   G   D++ Y+ ++  L +   + +A  +F 
Sbjct: 598 VVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFG 657

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            M   G+ P      +LL    +   +D A+++ NE+    L+
Sbjct: 658 RMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLV 700


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 125/241 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D  L+  ++  L    + ++++ +  +M++ G   + +   T++D   KAG   EAL
Sbjct: 221 VPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEAL 280

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +LD ML      T VT+ +L++ LCK+G +  A + F  M   G  PN  +YT+LI G 
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF 340

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   ++ A +LFDEM +    PD   +T +IDG  K  +F++A      M   G   ++
Sbjct: 341 AKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNV 400

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+++ GLS+ G +  A  +   MI  G  PD +  I LL    + G +DEA +L +E
Sbjct: 401 VTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDE 460

Query: 246 M 246
           +
Sbjct: 461 L 461



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 115/239 (48%), Gaps = 1/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG ++  LC     E ++ L   M  +G   N+VI T+L+  + K+G   EA SL DEM+
Sbjct: 298 YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMV 357

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++     V+T  V+IDGLCKSG   +A   F  M   G  PNV  YT +I GL K   + 
Sbjct: 358 EAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVA 417

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +   M      PD+  Y  L+DG+ K     EA  L + + +     +L  Y+SLV
Sbjct: 418 NAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLV 477

Query: 193 WGLSRCGHLQEA-RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL   G +++    LF +        D  LC S++    + G +DEA  +   M+  G
Sbjct: 478 NGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 114/253 (45%), Gaps = 9/253 (3%)

Query: 9   DLPLYGTIIWGLC----IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +L LY +++ GLC    +E   +D   L  + K    T +  +C +++    K G   EA
Sbjct: 469 NLQLYSSLVNGLCDGGSVEKTLDD---LFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEA 525

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKS--GLVREAIDYFGRMPDFGLHPNVAVYTALI 122
             +   M+    +    T+ +LI+GLC+S    V  A      +   G  P+   YT L 
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLC 585

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GLCK   ++RA  + +E   R    D  AYTAL  G         A++L   M   G  
Sbjct: 586 IGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGA 645

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D  AY  ++ GL +   L++A   F EMIG+G  P      +L++     GN+DEA   
Sbjct: 646 PDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHR 705

Query: 243 QNEMMGRGLLSGS 255
              M+ RG L GS
Sbjct: 706 FESMLARGELVGS 718



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 3/247 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + D+  Y  ++  L  E  +     +  EM + G+  NT     L+ ++ +     +A+
Sbjct: 115 FQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAV 174

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDG 124
           +  + M   R +  + TF +L+D LCK+G+  +A + F  M   G + P+ A++TA++  
Sbjct: 175 TCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRT 234

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN-LKNRMTEVGVDL 183
           L K   ++ AR +F +M K    PD  AY  +IDG  K    +EAL  L N + +  V  
Sbjct: 235 LLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPT 294

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y  LV  L + G L+ A  LF  M   G  P+ ++  SL+    + G M EA  L 
Sbjct: 295 EVT-YGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLF 353

Query: 244 NEMMGRG 250
           +EM+  G
Sbjct: 354 DEMVEAG 360



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTA-NTVICTTLMDAYFKAG 59
           MK K  K DL  +  ++  LC     E +  +  EM   G    +  + T ++    KA 
Sbjct: 180 MKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAK 239

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA  +  +M         + +  +IDGL K+G  +EA+     M      P    Y 
Sbjct: 240 RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYG 299

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L++ LCK   +ERA  LF  M      P++  YT+LI G+ K    KEA +L + M E 
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEA 359

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  +T ++ GL + G+ ++A   F EM+  G  P+ +   ++++   + G +  A
Sbjct: 360 GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANA 419

Query: 240 IELQNEMMGRGLLSGS 255
             +   M+  G    S
Sbjct: 420 FRIMKGMIAHGCFPDS 435



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 110/253 (43%), Gaps = 3/253 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCI--ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
           M  +  K D   Y  +I GLC   E++ E +  LL ++++ G   + V  T L     K 
Sbjct: 532 MVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKI 591

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           GE   A+ +L+E         VV +  L  GLC  G V  A+  F  M   G  P+ A Y
Sbjct: 592 GEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAY 651

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             +I+GL K   +E A   FDEM  +   P    YTAL+       +  EA +    M  
Sbjct: 652 CCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLA 711

Query: 179 VGVDL-DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
            G  +  +  Y +L+ G  +   +  A  LF +MI RG +P  +   SL       G  +
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771

Query: 238 EAIELQNEMMGRG 250
           +A EL  EM   G
Sbjct: 772 KAQELLQEMAAGG 784



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 3/245 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP--SEALS 66
           D  L  +II GLC   + +++  +   M   G   +      L++   ++ E     A +
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL ++         VT+  L  GLCK G V  A+         G + +V  YTAL  GLC
Sbjct: 565 LLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLC 624

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            +  ++RA +LF EM ++   PD  AY  +I+G +K +  ++A    + M   G    + 
Sbjct: 625 YQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVA 684

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG-NMDEAIELQNE 245
            YT+LV  L   G++ EA   F  M+ RG L   ++    L   + +   +D A++L  +
Sbjct: 685 TYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFED 744

Query: 246 MMGRG 250
           M+ RG
Sbjct: 745 MISRG 749



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 1/191 (0%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           AD+  Y  +  GLC + + + +  L  EM   G   +      +++   K  +  +A   
Sbjct: 611 ADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKF 670

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDGLC 126
            DEM+    + TV T+  L+  LC +G V EA   F  M   G L  +V +Y ALI G C
Sbjct: 671 FDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFC 730

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   ++ A  LF++M  R  +P      +L DG ++    ++A  L   M   G      
Sbjct: 731 KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAA 790

Query: 187 AYTSLVWGLSR 197
            +T+++ GL +
Sbjct: 791 TFTAILDGLRK 801



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 71/166 (42%), Gaps = 3/166 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y  II GL    K ED+     EM   G        T L+ A   AG   EA    
Sbjct: 647 DAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706

Query: 69  DEMLDSRIEV--TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           + ML +R E+  +V+ +  LI G CK+  V  A+  F  M   G  P      +L DGL 
Sbjct: 707 ESML-ARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLV 765

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           +    E+A+ L  EM      P    +TA++DG  K +   + L L
Sbjct: 766 RSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKL 811



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 1/130 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M GK  K  +  Y  ++  LC     +++      M   G L  + +I   L+  + KA 
Sbjct: 674 MIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKAL 733

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +   AL L ++M+      T VT   L DGL +SG   +A +    M   G  P+ A +T
Sbjct: 734 KVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFT 793

Query: 120 ALIDGLCKKN 129
           A++DGL K +
Sbjct: 794 AILDGLRKSD 803



 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 1/138 (0%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G   +V  Y  L++ L  +    +   + +EM K  + P+T ++  LI  + +     +A
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL-PDEILCISLLK 228
           +     M       DL+ +  LV  L + G  ++A  +FHEM+  G + PD  L  ++++
Sbjct: 174 VTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVR 233

Query: 229 KHYERGNMDEAIELQNEM 246
              +   + EA E+  +M
Sbjct: 234 TLLKAKRVKEAREVFGQM 251


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +K +  +YG+II  LC   K  +++   SEM   G+  +TV+ TTL+D + K G+
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM    I   V+T+  +I G C+ G + EA   F  M   GL P+   +T 
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A  + + M +    P+   YT LIDG  K      A  L + M ++G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y S+V GL + G+++EA  L  E    G+  D +   +L+  + + G MD+A 
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546

Query: 241 ELQNEMMGRGL 251
           E+  EM+G+GL
Sbjct: 547 EILKEMLGKGL 557



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    D+  Y T++ G C   + +    L+  MK  GL  N+ I  +++    +  +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA     EM+   I    V +  LIDG CK G +R A  +F  M    + P+V  YTA
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   +  A  LF EM  + + PD+  +T LI+GY K    K+A  + N M + G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YT+L+ GL + G L  A  L HEM   G+ P+     S++    + GN++EA+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511

Query: 241 ELQNEMMGRGL 251
           +L  E    GL
Sbjct: 512 KLVGEFEAAGL 522



 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  D+  Y  II G C      ++  L  EM   GL  ++V  T L++ Y KAG 
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + + M+ +     VVT+  LIDGLCK G +  A +    M   GL PN+  Y +
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK   IE A  L  E     +  DT  YT L+D Y K     +A  +   M   G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  +  L+ G    G L++   L + M+ +GI P+     SL+K++  R N+  A 
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616

Query: 241 ELQNEMMGRGL 251
            +  +M  RG+
Sbjct: 617 AIYKDMCSRGV 627



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 115/215 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++  Y +I+ GLC     E++  L+ E +  GL A+TV  TTLMDAY K+GE  +A 
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +L EML   ++ T+VTF VL++G C  G++ +       M   G+ PN   + +L+   
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C +N ++ A  ++ +M  R + PD   Y  L+ G+ K  + KEA  L   M   G  + +
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           + Y+ L+ G  +     EAR +F +M   G+  D+
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 122/248 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K ++ D   +  +I G C     +D+  + + M + G + N V  TTL+D   K G+   
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EM    ++  + T+  +++GLCKSG + EA+   G     GL+ +   YT L+D
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             CK   +++A+ +  EM  + + P    +  L++G+  H   ++   L N M   G+  
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   + SLV       +L+ A  ++ +M  RG+ PD     +L+K H +  NM EA  L 
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654

Query: 244 NEMMGRGL 251
            EM G+G 
Sbjct: 655 QEMKGKGF 662



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 122/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  +C   + +++  LL  M+  G T + +  +T+++ Y + GE  +   L++ M 
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++     +  +I  LC+   + EA + F  M   G+ P+  VYT LIDG CK+  I 
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F EM  RD+ PD   YTA+I G+ +     EA  L + M   G++ D   +T L+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + GH+++A  + + MI  G  P+ +   +L+    + G++D A EL +EM   GL
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 113/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC E   + +  LL EM + GL  N     ++++   K+G   EA+ L+ E  
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + +    VT+  L+D  CKSG + +A +    M   GL P +  +  L++G C    +E
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L + M  + + P+ T + +L+  Y    + K A  +   M   GV  D   Y +LV
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +  +++EA  LF EM G+G          L+K   +R    EA E+ ++M   GL
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/226 (23%), Positives = 108/226 (47%), Gaps = 1/226 (0%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFK-AGEPSEALSLLDEMLDSRIEVTVVTFCV 85
            +++ +  +M   GL  +   C   +    K   + + A+ +  E  +  +   V ++ +
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I  +C+ G ++EA      M   G  P+V  Y+ +++G C+   +++   L + M ++ 
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P++  Y ++I    +     EA    + M   G+  D   YT+L+ G  + G ++ A 
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             F+EM  R I PD +   +++    + G+M EA +L +EM  +GL
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 40/207 (19%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRM---------------------------------- 106
           V F VL+D     GL+REA   F +M                                  
Sbjct: 180 VFFQVLVD----FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 235

Query: 107 --PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
             P+ G+  NVA Y  +I  +C+   I+ A +L   M  +   PD  +Y+ +++GY +  
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
              +   L   M   G+  +   Y S++  L R   L EA   F EMI +GILPD ++  
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L+    +RG++  A +   EM  R +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDI 382



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 70/162 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK ++  +  +  ++ G C+    ED + LL+ M   G+  N     +L+  Y     
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++  +M    +     T+  L+ G CK+  ++EA   F  M   G   +V+ Y+ 
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           LI G  K+     AR +FD+M +  +  D   +    D   K
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713



 Score = 40.4 bits (93), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 35/74 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKGK     +  Y  +I G     KF +++ +  +M+  GL A+  I     D  +K   
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716

Query: 61  PSEALSLLDEMLDS 74
           P   +  +DE++++
Sbjct: 717 PDTIVDPIDEIIEN 730


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 124/257 (48%), Gaps = 5/257 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANT-----VICTTLMDAY 55
           M  K +  D+  Y  ++   C  S+ +++  LL  M   G T N      V    L+   
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301

Query: 56  FKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
            KAG   +A +L +EM+   ++  V+TF  LIDGLCK+G V  A D    M + G+ PNV
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 361

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             Y AL+ GLCK   IE A    +EM     +PD+  Y +L+    +     +AL L + 
Sbjct: 362 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSE 421

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           +   G D D   Y  LV GL + G  ++A  +  EM+G+G  PD     +     +  GN
Sbjct: 422 LKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGN 481

Query: 236 MDEAIELQNEMMGRGLL 252
           +   +EL   ++ +G+L
Sbjct: 482 LAGTMELLRVVLAKGML 498



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 127/260 (48%), Gaps = 9/260 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM--KENGLTANTVICTTLMDAYFKA 58
           M  +    ++  Y  +I GLC   + ++++ L+ EM  K   +  N +   + +D   K 
Sbjct: 98  MSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 157

Query: 59  GEPSEALSLLDEMLDSRIEVT--VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
              +EA  L+  + D  + V+   VTF  LIDGLCK G + EA   F  M   G  PNV 
Sbjct: 158 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 217

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y AL++GLCK + +ERA  + + M  + + PD   Y+ L+D + K     EAL L + M
Sbjct: 218 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 277

Query: 177 TEVGVD-----LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
              G        D   +  L+ G  + G+ ++A  LF EM+ + + PD +   +L+    
Sbjct: 278 ASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 337

Query: 232 ERGNMDEAIELQNEMMGRGL 251
           + G ++ A ++ + M   G+
Sbjct: 338 KAGQVEAARDILDLMGNLGV 357



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 122/252 (48%), Gaps = 9/252 (3%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I  LC     E+++ L  +M   G   N V  + L++   K G   EA  L+
Sbjct: 71  DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELI 130

Query: 69  DEMLDSRIEV--TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH--PNVAVYTALIDG 124
            EM     +V   ++T+   +DGLCK  +  EA +    + D  L   P+   ++ LIDG
Sbjct: 131 QEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDG 190

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK   I+ A ++FD+M     +P+   Y AL++G  K +  + A  +   M + GV  D
Sbjct: 191 LCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPD 250

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRG-----ILPDEILCISLLKKHYERGNMDEA 239
           +  Y+ LV    +   + EA  L H M  RG     ++PD++    L+    + GN ++A
Sbjct: 251 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQA 310

Query: 240 IELQNEMMGRGL 251
             L  EM+ + L
Sbjct: 311 SALFEEMVAKNL 322



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 5/244 (2%)

Query: 13  YGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y  ++  LC       + ++   EM  +G+    V   T+++   K+ +    + L +E+
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           ++      VVT+  LID LCK+G + EA    G M   G  PNV  Y+ LI+GLCK   I
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 132 ERARNLFDEMPKR--DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE--VGVDLDLNA 187
           + AR L  EM ++  D++P+   Y + +DG  K     EA  L   + +  + V  D   
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +++L+ GL +CG + EA  +F +MI  G +P+ I   +L+    +   M+ A  +   M+
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 248 GRGL 251
            +G+
Sbjct: 244 DKGV 247



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 130/261 (49%), Gaps = 7/261 (2%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGL--TANTVICTTLMDAYFKAG 59
           K  ++  ++  Y + + GLC +S   ++  L+  +++  L  + +TV  +TL+D   K G
Sbjct: 136 KSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 195

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  EA S+ D+M+       V+T+  L++GLCK+  +  A      M D G+ P+V  Y+
Sbjct: 196 QIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 255

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRD-----MIPDTTAYTALIDGYLKHESFKEALNLKN 174
            L+D  CK + ++ A  L   M  R      ++PD   +  LI G  K  +F++A  L  
Sbjct: 256 VLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFE 315

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M    +  D+  + +L+ GL + G ++ AR +   M   G+ P+ +   +L+    + G
Sbjct: 316 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 375

Query: 235 NMDEAIELQNEMMGRGLLSGS 255
            ++EA +   EM+  G +  S
Sbjct: 376 RIEEACQFLEEMVSSGCVPDS 396



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 103/226 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C    FE +  L  EM    L  + +    L+D   KAG+   A  +LD M 
Sbjct: 294 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 353

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   VVT+  L+ GLCKSG + EA  +   M   G  P+   Y +L+  LC+ +  +
Sbjct: 354 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 413

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  E+      PDT  Y  L+DG  K    ++A+ +   M   G   D   + +  
Sbjct: 414 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACF 473

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            GL R G+L     L   ++ +G+LPD   C S+L      G +D+
Sbjct: 474 SGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 96/211 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN++ D+  +G +I GLC   + E ++ +L  M   G+  N V    L+    K+G 
Sbjct: 317 MVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGR 376

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   L+EM+ S      +T+  L+  LC++    +A+     +  FG  P+   Y  
Sbjct: 377 IEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNI 436

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGL K    E+A  + +EM  +   PD+  + A   G  +  +    + L   +   G
Sbjct: 437 LVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKG 496

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +  D    +S++  + R G L + + +  E 
Sbjct: 497 MLPDATTCSSILDWVCRSGKLDDVKAMIKEF 527


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 142/288 (49%), Gaps = 36/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
           M   N +A+  +Y TII GLC   +   +K +L  + KE   +       +++D +FK G
Sbjct: 545 MIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEG 604

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +   A+    EM ++ I   VVTF  LI+G CKS  +  A++    M    L  +V  Y 
Sbjct: 605 DTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYG 664

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ALIDG CKKN ++ A  LF E+ +  ++P+ + Y  LI G+        A++L  +M   
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVND 724

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL------------- 226
           G+  DL  YT+++ GL + G+L  A  L+ E++  GI+PDEIL + L             
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRA 784

Query: 227 ------LKK----------------HYERGNMDEAIELQNEMMGRGLL 252
                 +KK                H+  GN++EA  + +EM+ +GL+
Sbjct: 785 SKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLV 832



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 101/194 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K++K D+P YG +I G C ++  + +  L SE+ E GL  N  +   L+  +   G+
Sbjct: 651 MKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGK 710

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  +M++  I   + T+  +IDGL K G +  A D +  +   G+ P+  +Y  
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVV 770

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GL KK    RA  + +EM K+D  P+   Y+ +I G+ +  +  EA  + + M E G
Sbjct: 771 LVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKG 830

Query: 181 VDLDLNAYTSLVWG 194
           +  D   +  LV G
Sbjct: 831 LVHDDTIFNLLVSG 844



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 35/256 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G   E   + +     EM ENG++ N V  T+L++ + K+     AL ++ EM 
Sbjct: 593 YNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMK 652

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-------------- 118
              +++ V  +  LIDG CK   ++ A   F  + + GL PNV+VY              
Sbjct: 653 SKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMD 712

Query: 119 ---------------------TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                T +IDGL K   +  A +L+ E+    ++PD   Y  L+
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLV 772

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +G  K   F  A  +   M +     ++  Y++++ G  R G+L EA  +  EM+ +G++
Sbjct: 773 NGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLV 832

Query: 218 PDEILCISLLKKHYER 233
            D+ +   L+    E+
Sbjct: 833 HDDTIFNLLVSGRVEK 848



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 120/254 (47%), Gaps = 6/254 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D  ++  +I   C   + E +  +   MK  G+  ++V+   ++    KA  
Sbjct: 371 MEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAES 430

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P  AL + ++  ++ I    +   + +  LCK G V  A  +   M + G+ PNV  Y  
Sbjct: 431 PEAALEIFNDSFETWIAHGFMCNKIFL-LLCKQGKVDAATSFLRMMENKGIEPNVVFYNN 489

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++   C+   ++ AR++F EM ++ + P+   Y+ LIDG+ K++  + A  + N+M    
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASN 549

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI---SLLKKHYERGNMD 237
            + +   Y +++ GL + G   +A+ +   +I        + C    S++   ++ G+ D
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRY--SMGCTSYNSIIDGFFKEGDTD 607

Query: 238 EAIELQNEMMGRGL 251
            A+E   EM   G+
Sbjct: 608 SAVEAYREMSENGI 621



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 109/221 (49%), Gaps = 2/221 (0%)

Query: 32  LLSEMKENG-LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           LL EM+E G + A+    T+++ A  K G   EA+ + DEM+   I ++V+    LI G 
Sbjct: 296 LLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGF 355

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           C    + +A+D+F RM + GL P+  +++ +I+  CK   +E+A  ++  M    + P +
Sbjct: 356 CNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSS 415

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
                +I G LK ES + AL + N   E  +         +   L + G +  A      
Sbjct: 416 VLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMC-NKIFLLLCKQGKVDAATSFLRM 474

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  +GI P+ +   +++  H    NMD A  + +EM+ +GL
Sbjct: 475 MENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 112/246 (45%), Gaps = 1/246 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+   +P    ++  L   +  +++K + ++M   G+  + V    LM A  +  +
Sbjct: 195 MVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERK 254

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP-NVAVYT 119
           P EA+ +   ++    E   + F + +   CK   +  A+D    M + G  P +   YT
Sbjct: 255 PEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYT 314

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++I    K+  +E A  + DEM    +     A T+LI G+       +AL+  NRM E 
Sbjct: 315 SVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEE 374

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D   ++ ++    +   +++A  ++  M   GI P  +L   +++   +  + + A
Sbjct: 375 GLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAA 434

Query: 240 IELQNE 245
           +E+ N+
Sbjct: 435 LEIFND 440



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/241 (20%), Positives = 101/241 (41%), Gaps = 36/241 (14%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV-------------- 96
           L++AY +      A+   + M+D  +   V     ++  L +S L+              
Sbjct: 175 LLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIG 234

Query: 97  ---------------------REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
                                 EA+  F R+   G  P+  +++  +   CK   +  A 
Sbjct: 235 VAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMAL 294

Query: 136 NLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
           +L  EM ++  +P +   YT++I   +K  + +EA+ +K+ M   G+ + + A TSL+ G
Sbjct: 295 DLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITG 354

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
                 L +A   F+ M   G+ PD+++   +++   +   M++A+E+   M   G+   
Sbjct: 355 FCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPS 414

Query: 255 S 255
           S
Sbjct: 415 S 415



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 92/191 (48%), Gaps = 5/191 (2%)

Query: 66  SLLDEMLDSR----IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           ++++ ++DS      E++   F  L++   ++  +  A+D F  M D  + P V     +
Sbjct: 151 AMVNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNV 210

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +  L + N I+ A+ ++++M    +  D      L+   L+    +EA+ +  R+   G 
Sbjct: 211 LSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGA 270

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP-DEILCISLLKKHYERGNMDEAI 240
           + D   ++  V    +   L  A  L  EM  +G +P  +    S++    + GNM+EA+
Sbjct: 271 EPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAV 330

Query: 241 ELQNEMMGRGL 251
           ++++EM+G G+
Sbjct: 331 KVKDEMVGFGI 341


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 1/241 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++   C + K  D   L  +M +NG++ + +    L+D Y K G   EA  L +EM+
Sbjct: 11  FRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMV 70

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +E ++ T+  L++  CK   ++EA++ F  M + G  P+V  Y+ +I GLCK   + 
Sbjct: 71  SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVT 130

Query: 133 RA-RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            A   LF +M +R    +T AY ALI+G  K E+ + A  L   M   G   D   Y ++
Sbjct: 131 EALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTI 190

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL R G + EA+  F  M  RG  PD +    LL   Y+ G  DEA++L  +++ +G 
Sbjct: 191 LSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGY 250

Query: 252 L 252
           +
Sbjct: 251 M 251



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 121/239 (50%), Gaps = 1/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G   + + +++  L  EM   GL  +     +L++A+ K  +  EA+ L   M 
Sbjct: 46  YNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMA 105

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDY-FGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   E  VVT+  +I GLCK+G V EA++  F +M + G   N   Y ALI+GLCK   I
Sbjct: 106 EKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENI 165

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           ERA  L +EM  +  +PD   Y  ++ G  +     EA    + M   G   D+ AY  L
Sbjct: 166 ERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGL 225

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  L + G   EA  LF ++I +G +PD +   S+L     + NMDEA E+  +M+  G
Sbjct: 226 LDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASG 284



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 123/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y TI+ GLC   K  ++K     M   G + + V    L+DA +K G+
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 234

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  +++        VT+  ++ GL +   + EA + F +M   G  PN A Y+ 
Sbjct: 235 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ G C+   ++ A  + +EM K   +PD   Y  L+DG  K     +A  L + M + G
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ +Y+ ++ GL +   + +ARVLF  MI R ++PD +    L+    + G +DEA 
Sbjct: 355 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 414

Query: 241 ELQNEMMGRG 250
           +L ++M   G
Sbjct: 415 DLLDQMTCSG 424



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 115/217 (52%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K    D   Y +I+ GL  +S  ++++ +  +M  +G   N    + ++  + +A +  
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  +L+EM        VVT+ +L+DGLCK+ LV +A + F  M D G  P++  Y+ ++
Sbjct: 307 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 366

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +GLCK N +  AR LFD M +R ++PD   +  L+DG  K     EA +L ++MT  G  
Sbjct: 367 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCA 426

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            D  AY +L+ GL + G   +A  L   M  +G L D
Sbjct: 427 PDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M  K  + D+  Y TII GLC   K  ++ ++L  +M E G +ANTV    L++   K  
Sbjct: 104 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDE 163

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
               A  LL+EM         +T+  ++ GLC+ G V EA  +F  MP  G  P+V  Y 
Sbjct: 164 NIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYN 223

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+D L K+   + A  LF ++  +  +PDT  Y +++ G  +  +  EA  +  +M   
Sbjct: 224 GLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVAS 283

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   +   Y+ ++ G  R   + +A  +  EM   G +PD +    LL    +   +D+A
Sbjct: 284 GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKA 343

Query: 240 IELQNEMMGRG 250
            EL + M+  G
Sbjct: 344 HELFSTMVDNG 354



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 1/172 (0%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           TF V++   CK G +R+    F +M D G+ P+   Y  LIDG  KK  ++ A  L++EM
Sbjct: 10  TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
               + P    Y +L++ + K    KEA+ L   M E G + D+  Y++++ GL + G +
Sbjct: 70  VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKV 129

Query: 202 QEA-RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            EA  +LFH+MI RG   + +   +L+    +  N++ A +L  EM  +G +
Sbjct: 130 TEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 1/139 (0%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           PN   +  ++   CK+  +     LF++M    + PD   Y  LIDGY K     EA  L
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M  VG++  +  Y SL+    +   ++EA  LF  M  +G  PD +   +++    +
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 233 RGNMDEAIE-LQNEMMGRG 250
            G + EA+E L ++M+ RG
Sbjct: 126 TGKVTEALEMLFHKMIERG 144



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 49/108 (45%)

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           R+  P+   +  ++  + K    ++   L  +M + G+  D   Y  L+ G ++ G + E
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A  L+ EM+  G+ P      SLL    +   M EA+EL   M  +G 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGF 109


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 130/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  +L  Y  +I G C       +  L  E+    L  N V+  TL+D + KA E
Sbjct: 294 MKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SL   M+   ++  +  +  LI G CKSG + EA+     M    L P+V  YT 
Sbjct: 354 LVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTI 413

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC +  +  A  LF  M    + P +  Y +LI G+ K  + ++AL+L + MT  G
Sbjct: 414 LINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSG 473

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ ++  +++L+ G  +  +++ A  L+ EM  +GI+PD +   +L+  H++  NM EA+
Sbjct: 474 VEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEAL 533

Query: 241 ELQNEMMGRGL 251
            L ++M+  G+
Sbjct: 534 RLYSDMLEAGI 544



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 2/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ ++GT++ G C   +   ++ L   M + G+  N  +   L+    K+G   EA+ LL
Sbjct: 337 NVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLL 396

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM    +   V T+ +LI+GLC    + EA   F RM +  + P+   Y +LI G CK+
Sbjct: 397 SEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKE 456

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             IE+A +L  EM    + P+   ++ LIDGY K  + K A+ L   MT  G+  D+  Y
Sbjct: 457 YNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTY 516

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE--LQNEM 246
           T+L+    +  +++EA  L+ +M+  GI P++     L+   ++ G + +AI+  L+N  
Sbjct: 517 TTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQ 576

Query: 247 MGRG 250
              G
Sbjct: 577 AATG 580



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 127/260 (48%), Gaps = 8/260 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N+  D+  Y  +I GLC E +  ++  L   MK   +  ++V   +L+  + K   
Sbjct: 399 MESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYN 458

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L  EM  S +E  ++TF  LIDG CK   ++ A+  +  M   G+ P+V  YT 
Sbjct: 459 IEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTT 518

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN--LKNRMTE 178
           LID   K+  ++ A  L+ +M +  + P+   +  L+DG+ K     +A++  L+N    
Sbjct: 519 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAA 578

Query: 179 VGVDLDLNA------YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            G  +   +      +T L+ GL + G++  A   F +M   G+ PD    +S+LK H  
Sbjct: 579 TGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLR 638

Query: 233 RGNMDEAIELQNEMMGRGLL 252
              + + + L  +M+  G+L
Sbjct: 639 EKRITDTMMLHCDMIKTGIL 658



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSK-LLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M  + +  D+ +Y ++++  C +  F   K  LL EM   G+  N  I T  +    +  
Sbjct: 224 MISRGLVPDVHIY-SVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCREN 282

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  EA  + + M    +   + T+  +IDG CK+G +R+A   +  +    L PNV V+ 
Sbjct: 283 KMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFG 342

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+DG CK   +  AR+LF  M K  + P+   Y  LI G  K  +  EA+ L + M  +
Sbjct: 343 TLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESL 402

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            +  D+  YT L+ GL     L EA  LF  M    I P  +   SL+    +  N+++A
Sbjct: 403 NLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKA 462

Query: 240 IELQNEMMGRGL 251
           ++L +EM   G+
Sbjct: 463 LDLCSEMTSSGV 474



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 99/204 (48%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I+ GL    +F+   +    M   GL  +  I + L    FK G PS+   LLDEM    
Sbjct: 204 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLG 263

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++  V  + + I  LC+   + EA   F  M   G+ PN+  Y+A+IDG CK   + +A 
Sbjct: 264 VKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAY 323

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L+ E+   +++P+   +  L+DG+ K      A +L   M + GVD +L  Y  L+ G 
Sbjct: 324 GLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQ 383

Query: 196 SRCGHLQEARVLFHEMIGRGILPD 219
            + G++ EA  L  EM    + PD
Sbjct: 384 CKSGNMLEAMGLLSEMESLNLSPD 407



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 8/212 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ ++  + T+I G C     + +  L  EM   G+  + V  TTL+DA+FK   
Sbjct: 469 MTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEAN 528

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV--- 117
             EAL L  +ML++ I     TF  L+DG  K G + +AID++          ++     
Sbjct: 529 MKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSC 588

Query: 118 -----YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
                +T LI+GLC+   I RA   F +M    + PD  +Y +++  +L+ +   + + L
Sbjct: 589 WKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLREKRITDTMML 648

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              M + G+  +L     L       G+L+ A
Sbjct: 649 HCDMIKTGILPNLMVNQLLAMFYQENGYLRSA 680



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 13/179 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y T+I     E+  +++  L S+M E G+  N      L+D ++K G 
Sbjct: 504 MTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 563

Query: 61  PSEALSLLDEMLDSRIEVTVVT--------FCVLIDGLCKSGLVREAIDYFGRMPDFGLH 112
            S+A+    E   +    ++V         F  LI+GLC++G +  A  +F  M   G+ 
Sbjct: 564 LSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVT 623

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI-----DGYLKHESF 166
           P++  Y +++    ++  I     L  +M K  ++P+      L      +GYL+   F
Sbjct: 624 PDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSACF 682



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 3/176 (1%)

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
           + ++  F +LI    + GL  +A+ +  R  +    P+     A+++GL ++   +    
Sbjct: 163 KFSIGVFSLLIMEFLEMGLFEDAL-WVSR--EMRCSPDSKACLAILNGLVRRRRFDSVWV 219

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
            +  M  R ++PD   Y+ L     K     +   L + MT +GV  ++  YT  +  L 
Sbjct: 220 DYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLC 279

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           R   ++EA  +F  M   G++P+     +++  + + GN+ +A  L  E++   LL
Sbjct: 280 RENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAELL 335


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 134/274 (48%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I GLC   +  ++K LL EM    L  N V+   L+D + + G   EA  ++ EM+
Sbjct: 190 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 249

Query: 73  DSRIEVTVVTFCVLIDGLCKSG-----------LVRE----------------------- 98
            + ++   +T+  L+ GLCK G           +VR+                       
Sbjct: 250 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKK 309

Query: 99  -AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            A      M + G+ PNV  Y+ +I GLC+    E+A +L +EM  + + P+   Y  LI
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 369

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            GY +  +   A  + ++MT+V V  DL  Y SL++GLS+ G ++E+   F +M  RG+L
Sbjct: 370 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 429

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P+E     L+  + + G+++ A +L   M+  GL
Sbjct: 430 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 463



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 118/228 (51%), Gaps = 4/228 (1%)

Query: 28  DSKLLLSEMKE----NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           D+  LL +++E     G++ +    +TL++AY K  E   A  +L EM +    +  VT+
Sbjct: 96  DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTY 155

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            VLI GLC+SG V EA  +   M D+GL P+   Y ALI+GLCK      A+ L DEM  
Sbjct: 156 NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC 215

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
            ++ P+   Y  LIDG+++  +  EA  +   M   GV  +   Y +LV GL + G +  
Sbjct: 216 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 275

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A +L  +M+     PD I    +++ H+   N  +A  L +EM   G+
Sbjct: 276 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGI 323



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 130/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ +   Y  ++ GLC   + + + LLL +M  +    +T+    +++ +F+   
Sbjct: 248 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHN 307

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL EM ++ I   V T+ ++I GLC+SG   +A D    M   GL PN  VY  
Sbjct: 308 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 367

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C++  +  A  +FD+M K +++PD   Y +LI G  K    +E+     +M E G
Sbjct: 368 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 427

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y+ L+ G  + G L+ A  L   M+  G+ P++++ I LL+ +++  ++++  
Sbjct: 428 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 487

Query: 241 ELQNEMMGRGLL 252
                M+ +G++
Sbjct: 488 STFKSMLDQGVM 499



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 118/234 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC     E++     +M++ GL  +      L++   K+   +EA +LLDEM 
Sbjct: 155 YNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMS 214

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + ++  VV +  LIDG  + G   EA      M   G+ PN   Y  L+ GLCK   ++
Sbjct: 215 CAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMD 274

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  L  +M +    PDT  Y  +I+G+ +H + K+A  L + M   G+  ++  Y+ ++
Sbjct: 275 RASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMI 334

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL + G  ++A  L  EM  +G+ P+  +   L+  +   GN+  A E+ ++M
Sbjct: 335 HGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM 388



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 127/278 (45%), Gaps = 36/278 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE----PSEALSLL 68
           Y  +I G       E ++ L+  M + GL  N VI   L+++YFK+ +     S   S+L
Sbjct: 435 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 494

Query: 69  DE--MLDSRIEVTVV-----------------------------TFCVLIDGLCKSGLVR 97
           D+  MLD+RI   ++                              +  LI GLCK+    
Sbjct: 495 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADRE 554

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +A      M   G+ PN+  Y ALIDGLCK   I  ARN+F+ +  + ++P+   YT+LI
Sbjct: 555 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 614

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DG  K      A  L N M   G+  D   Y+ L  G S  G L++A  L  EM  RG  
Sbjct: 615 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 674

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
                  +L+    +RG M E ++L + +MGRGL+  +
Sbjct: 675 SISSFN-NLVDGFCKRGKMQETLKLLHVIMGRGLVPNA 711



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  DL  Y ++I+GL    + E+S    ++M+E GL  N    + L+  Y K G+
Sbjct: 388 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 447

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+  MLD+ ++   V +  L++   KS  + +    F  M D G+  +  +Y  
Sbjct: 448 LESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGI 507

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L     +E A  +  E+ K   +PD   Y++LI G  K    ++A  + + M++ G
Sbjct: 508 LIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKG 567

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           VD ++  Y +L+ GL + G +  AR +F+ ++ +G++P+ +   SL+    + G++  A 
Sbjct: 568 VDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAF 627

Query: 241 ELQNEMMGRGL 251
            L NEM+  G+
Sbjct: 628 YLYNEMLATGI 638



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 5/249 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D  +YG +I  L      E +  +LSE+++NG   +  + ++L+    K  +
Sbjct: 493 MLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTAD 552

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +LDEM    ++  +V +  LIDGLCKSG +  A + F  +   GL PN   YT+
Sbjct: 553 REKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTS 612

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   I  A  L++EM    + PD   Y+ L  G       ++A+ L   M   G
Sbjct: 613 LIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA- 239
               ++++ +LV G  + G +QE   L H ++GRG++P+ +   +++    E G + E  
Sbjct: 673 -HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 731

Query: 240 ---IELQNE 245
              +ELQ +
Sbjct: 732 TIFVELQQK 740



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 119/241 (49%), Gaps = 5/241 (2%)

Query: 15  TIIWGLCIESKF-----EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           TI + L IE  F     +D+  LLSEM+  G++ N    + ++    ++GEP +A  LL+
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLE 351

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM    ++     +  LI G C+ G V  A + F +M    + P++  Y +LI GL K  
Sbjct: 352 EMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVG 411

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +E +   F +M +R ++P+   Y+ LI GYLK+   + A  L  RM + G+  +   Y 
Sbjct: 412 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 471

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+    +   +++    F  M+ +G++ D  +   L+      GNM+ A  + +E+   
Sbjct: 472 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKN 531

Query: 250 G 250
           G
Sbjct: 532 G 532



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 117/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  ++  Y  +I GLC   + E +  LL EM   GL  N  +   L+  Y + G 
Sbjct: 318 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGN 377

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  + D+M    +   +  +  LI GL K G V E+  YF +M + GL PN   Y+ 
Sbjct: 378 VSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSG 437

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K   +E A  L   M    + P+   Y  L++ Y K +  ++  +    M + G
Sbjct: 438 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 497

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V LD   Y  L+  LS  G+++ A  +  E+   G +PD  +  SL+    +  + ++A 
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF 557

Query: 241 ELQNEMMGRGL 251
            + +EM  +G+
Sbjct: 558 GILDEMSKKGV 568



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 102/223 (45%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + +D+  ++  M++ GL  +   C  L+    +A   +    + + M+ + I   V T+ 
Sbjct: 62  RVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYS 121

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            LI+  CK      A      M + G   N   Y  LI GLC+   +E A     +M   
Sbjct: 122 TLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDY 181

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            ++PD   Y ALI+G  K     EA  L + M+   +  ++  Y +L+ G  R G+  EA
Sbjct: 182 GLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEA 241

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             +  EM+  G+ P++I   +L++   + G MD A  L  +M+
Sbjct: 242 FKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMV 284



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 76/162 (46%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VL+D   KSG V++A +    M D GL P++    AL+  L + + +     + + M   
Sbjct: 52  VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 111

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   Y+ LI+ Y K   F  A  +   M E G  L+   Y  L+ GL R G ++EA
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
                +M   G++PD     +L+    +    +EA  L +EM
Sbjct: 172 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEM 213



 Score = 40.0 bits (92), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 18/175 (10%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A +  +  ++ G C   K +++  LL  +   GL  N +    ++    +AG+ SE  ++
Sbjct: 674 ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI 733

Query: 68  LDEMLDSRIEVTVVTFCVL------------------IDGLCKSGLVREAIDYFGRMPDF 109
             E+     E     F  L                  I   CK G + +A+     +   
Sbjct: 734 FVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAK 793

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
                 + Y A++D LC+K  +  A NL  EM KR  +  T      I  + +H 
Sbjct: 794 SAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVALLGIFWFRRHH 848


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 126/238 (52%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  Y +++ GLC   +  D+  L+ +M   G T N V   TL+D   K G   +A ++L
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+D      ++ + +LI+GLCK+  V E+I    R    G+ P+V  Y+++I GLC+ 
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A  L   +  R   PD   Y+ LIDG  K     EA +L   MT  G D D+  Y
Sbjct: 302 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTY 361

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           ++L+ GL + G + EA +L   M+  G  P  +   SL+K   +  ++DEAIEL  EM
Sbjct: 362 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419



 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 130/250 (52%), Gaps = 2/250 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    + ++  Y ++I GLC  ++ + ++ L   MK    + + V   TL+D  F+ G+
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A++L  EMLD R    V++F +L+ GLC++G +  A+++F +M D    PNV  Y+ 
Sbjct: 61  LERAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSV 118

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK N + +A  L + M  R   PD   YT L+DG  K      A  +   M + G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y SL+ GL R   + +A  L  +M  RG  P+ +   +L+    + G + +A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 241 ELQNEMMGRG 250
            +  +M+ +G
Sbjct: 239 AMLADMIDKG 248



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC  ++   +  LL  MK  G + + +  T L+D   K  + + A  +L EML
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+     +VT+  L+ GLC++  V +A+     M   G  PNV  Y  LIDGLCK   ++
Sbjct: 176 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +  +M  +   PD   Y  LI+G  K +   E++ L  R    G+  D+  Y+S++
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +GL R   L EA  L   +  RG  PD IL  +L+    + G +DEA +L   M G G
Sbjct: 296 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 2/212 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK D+  Y ++I+GLC  ++ +++  LL  +K  G   + ++ +TL+D   KAG+  EA 
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L + M     +  VVT+  LIDGLCK+G V EA     RM   G  P+   Y +LI GL
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF-KEALNLKNRMTEVGVDLD 184
           C  N ++ A  L +EM + +  P    Y  LI G  + E     AL+    M + GV  D
Sbjct: 404 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPD 463

Query: 185 LNAYTSLVWGLSRCGHLQEAR-VLFHEMIGRG 215
              Y+ L+ GL +   L E R ++  +M+  G
Sbjct: 464 HITYSILLEGLKKSKDLHELRHLVLDQMVQLG 495



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    ++  YGT+I GLC   + +D+  +L++M + G T + +I   L++   KA +
Sbjct: 209 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 268

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+++LL   +   I+  VVT+  +I GLC+S  + EA      +   G  P+V +Y+ 
Sbjct: 269 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 328

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   ++ A +L++ M       D   Y+ LIDG  K     EA  L  RM  +G
Sbjct: 329 LIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 388

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE-A 239
                  Y SL+ GL    HL EA  L  EM      P  +    L+        +D  A
Sbjct: 389 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAA 448

Query: 240 IELQNEMMGRGLL 252
           ++   EM+  G++
Sbjct: 449 LDYFQEMIDNGVI 461



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 2/182 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K +    D+ LY T+I GLC   K +++  L   M  +G  A+ V  +TL+D   KAG 
Sbjct: 314 VKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGR 373

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M+      + +T+  LI GLC    + EAI+    M      P+   Y  
Sbjct: 374 VDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI 433

Query: 121 LIDGLCKKNCIERAR-NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK-NRMTE 178
           LI G+C+   ++ A  + F EM    +IPD   Y+ L++G  K +   E  +L  ++M +
Sbjct: 434 LIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 493

Query: 179 VG 180
           +G
Sbjct: 494 LG 495


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  135 bits (340), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 131/254 (51%), Gaps = 3/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIES---KFEDSKLLLSEMKENGLTANTVICTTLMDAYFK 57
           MK   I  ++  Y T++ G C      K   ++  + EM  N +  N V   TL+D + K
Sbjct: 226 MKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCK 285

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
               + A    +EM    ++  +VT+  LI+GLC +G + EAID + +M   GL PN+  
Sbjct: 286 DENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVT 345

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y ALI+G CKK  ++ A  +FD++ K++++P+   +  +ID Y K    +E  +L + M 
Sbjct: 346 YNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSML 405

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           + G+  +++ Y  L+ GL R   LQ A+ L +EM  +G+  D +    L+    +     
Sbjct: 406 DEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSR 465

Query: 238 EAIELQNEMMGRGL 251
            A +L NEM   GL
Sbjct: 466 NAEKLLNEMFNLGL 479



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 4/235 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  +K ++  Y  +I G C +   +++  +  ++ +  L  N +   T++DAY K G 
Sbjct: 334 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGM 393

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  SL   MLD  I   V T+  LI GLC+   ++ A +    M + GL  +V  Y  
Sbjct: 394 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 453

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK +    A  L +EM    + P+   Y  L+DGY      K ALN++ RM +  
Sbjct: 454 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 513

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHY 231
              ++  Y  L+ G  +   L+ A  L +EM+ +G+ P+    +I+ + +L+K +
Sbjct: 514 KQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGF 568



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +K ++  Y ++I GLC   K E++  L  +M   GL  N V    L++ + K   
Sbjct: 299 MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + D++    +   V+TF  +ID  CK G++ E       M D G+ PNV+ Y  
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 418

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC+K  ++ A+ L +EM  + +  D   Y  LIDG  K++  + A  L N M  +G
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 478

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +L+ G    G L+ A  +   M      P+ +    L+K + +   ++ A 
Sbjct: 479 LKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAAN 538

Query: 241 ELQNEMMGRGL 251
            L NEM+ +GL
Sbjct: 539 GLLNEMLEKGL 549



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 114/234 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C +     +K    EM++ GL  N V   +L++     G+  EA+ L D+M+
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 335

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++  +VT+  LI+G CK  +++EA   F  +    L PNV  +  +ID  CK+  +E
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
              +L   M    ++P+ + Y  LI G  + +  + A  L N M   G+  D+  Y  L+
Sbjct: 396 EGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILI 455

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL +    + A  L +EM   G+ P+ +   +L+  +   G +  A+ ++  M
Sbjct: 456 DGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRM 509



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 124/240 (51%), Gaps = 3/240 (1%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  L  E+K  D + +  EM +  +  N       ++   +AG+ ++A   +++M    
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230

Query: 76  IEVTVVTFCVLIDGLCK---SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           I   VVT+  L+DG CK   +G + +A  +   M    + PN   +  LIDG CK   + 
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+  F+EM K+ + P+   Y +LI+G   +   +EA++L ++M  +G+  ++  Y +L+
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   ++EA  +F ++  + ++P+ I   +++  + + G M+E   L + M+  G+L
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL 410



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 3/212 (1%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           A  +I   L+ AY K  E   A        D   ++++ +   L+  L K   + +    
Sbjct: 128 ATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYV 187

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M    +H N+  +   I+GLC+   + +A +  ++M    + P+   Y  L+DGY K
Sbjct: 188 YKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCK 247

Query: 163 HESFKEALNLKNRMTEVGVDL---DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             S  +    +  M E+  +    +   + +L+ G  +  ++  A+  F EM  +G+ P+
Sbjct: 248 RGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPN 307

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   SL+      G ++EAI+L ++M+G GL
Sbjct: 308 IVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL 339


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 116/212 (54%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N K ++  Y  I+ GLC   + +++K L  EMK  G+  + +   +L+  +  AG+  E+
Sbjct: 210 NCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEES 269

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             LLDEMLD  ++  +VTF VLID LCK G V EA    G M + G+ P++  Y +LI+G
Sbjct: 270 KRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEG 329

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            C    +  AR LF  MP +   PD  +Y  LI+GY K    +EA+ L N M  VG   +
Sbjct: 330 FCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPN 389

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           +  Y SL+ G+   G + +A+ LF  M   GI
Sbjct: 390 VITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 421



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 114/244 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  DL  Y ++I G C+      ++ L   M   G   + +    L++ Y K  +  EA+
Sbjct: 316 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 375

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +EML       V+T+  L+ G+  +G V +A   F  M   G+  N   Y   +DGL
Sbjct: 376 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 435

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK +C+  A  LF E+   +   +      LIDG  K    + A  L  +++  G + ++
Sbjct: 436 CKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV 495

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT ++ G  R G + +A VL  +M   G  PD I   +L++  YE   ++E ++L + 
Sbjct: 496 VTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHR 555

Query: 246 MMGR 249
           M  +
Sbjct: 556 MAQK 559



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 131/284 (46%), Gaps = 41/284 (14%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC+E +  ++  L   M++ G T + V   TL+      G  + AL L  EML
Sbjct: 142 YNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEML 201

Query: 73  D--SRIEVT----VVTFCVLIDGLCKSGLVREAIDYF------GRMP------------- 107
           +  SR E+     V+T+ +++DGLCK G   EA   F      G +P             
Sbjct: 202 NDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFC 261

Query: 108 ----------------DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                           D GL P++  +  LID LCK+  +  A+ L   M +  ++PD  
Sbjct: 262 CAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLV 321

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y +LI+G+        A  L   M   G + D+ +Y  L+ G S+   ++EA  L++EM
Sbjct: 322 TYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 381

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           +  G  P+ I   SLLK  +  G +D+A +L + M   G+   S
Sbjct: 382 LLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENS 425



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +   +  Y ++I G C   K+E+SK LL EM + GL  + V    L+D   K G+
Sbjct: 241 MKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGK 300

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M++S I   +VT+  LI+G C  G +  A + F  MP  G  P+V  Y  
Sbjct: 301 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 360

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL------------------------ 156
           LI+G  K   +E A  L++EM      P+   Y +L                        
Sbjct: 361 LINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG 420

Query: 157 -----------IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                      +DG  K++   EA+ L   +      L++     L+ GL + G L+ A 
Sbjct: 421 IAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAW 480

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            LF ++   G  P+ +    ++      G +D+A  L  +M   G
Sbjct: 481 ELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 98/197 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  Y +++ G+ +  K +D+K L S MK +G+  N+      +D   K     EA+ 
Sbjct: 387 RPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 446

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  E+  S  ++ +     LIDGLCK+G +  A + F ++ + G  PNV  YT +I G C
Sbjct: 447 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 506

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           ++  +++A  L  +M      PD   Y  L+ G+ +    +E + L +RM +  V  D  
Sbjct: 507 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 566

Query: 187 AYTSLVWGLSRCGHLQE 203
             + +V  LS+    QE
Sbjct: 567 TCSIVVDMLSKDEKYQE 583



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 98/223 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + D+  Y  +I G     K E++  L +EM   G   N +   +L+   F AG+
Sbjct: 346 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK 405

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L   M    I     T+ + +DGLCK+  + EA+  F  +        +     
Sbjct: 406 VDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC 465

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  LF+++      P+   YT +I G+ +     +A  L  +M   G
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
              D+  Y +L+ G      L+E   L H M  + + PD I C
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITC 568



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 117/256 (45%), Gaps = 6/256 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   + +D      ++  LC  ++  +     + +   G + N V   TL+        
Sbjct: 95  MRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHR 154

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDFGLHPN 114
            SEA  L   M        VVT+  LI GLC +G +  A+     M       +    PN
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           V  Y  ++DGLCK    + A+ LF+EM  + MIP   +Y +LI G+     ++E+  L +
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLD 274

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M + G+  D+  +  L+  L + G + EA+ L   MI  GI+PD +   SL++     G
Sbjct: 275 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 334

Query: 235 NMDEAIELQNEMMGRG 250
           +++ A EL   M  +G
Sbjct: 335 DLNSARELFVSMPSKG 350



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 6/207 (2%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+    K    S+  SL ++M  S +     T  +L++ LC    +RE    F  +   G
Sbjct: 75  LLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRG 134

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PN+  Y  LI GLC ++ I  A  LF  M K    PD   Y  LI G     +   AL
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIAL 194

Query: 171 NLKNRM------TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
            L   M       E+    ++  Y  +V GL + G   EA+ LF EM  +G++P  I   
Sbjct: 195 KLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYN 254

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
           SL+      G  +E+  L +EM+ +GL
Sbjct: 255 SLIHGFCCAGKWEESKRLLDEMLDQGL 281



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 1/186 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  +   YG  + GLC      ++  L +E+K +           L+D   KAG+
Sbjct: 416 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 475

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L +++ +   E  VVT+ ++I G C+ G V +A     +M   G  P++  Y  
Sbjct: 476 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 535

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT-EV 179
           L+ G  + N +E    L   M ++D+ PD    + ++D   K E ++E L+L  R   + 
Sbjct: 536 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 595

Query: 180 GVDLDL 185
           GVD  L
Sbjct: 596 GVDKHL 601



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 2/159 (1%)

Query: 91  CKSGLVR--EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           CK+G V    A+ +F  M      P+++ +  L+ GL K     +  +L+++M    +  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D      L++        +E       +   G   ++  Y +L+ GL     + EA  LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             M   G  PD +   +L+K     GN++ A++L  EM+
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEML 201


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 131/251 (52%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            MK K +K +  +YG+II  LC   K  +++   SEM   G+  +TV+ TTL+D + K G+
Sbjct: 750  MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               A     EM    I   V+T+  +I G C+ G + EA   F  M   GL P+   +T 
Sbjct: 810  IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LI+G CK   ++ A  + + M +    P+   YT LIDG  K      A  L + M ++G
Sbjct: 870  LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +  ++  Y S+V GL + G+++EA  L  E    G+  D +   +L+  + + G MD+A 
Sbjct: 930  LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989

Query: 241  ELQNEMMGRGL 251
            E+  EM+G+GL
Sbjct: 990  EILKEMLGKGL 1000



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    D+  Y T++ G C   + +    L+  MK  GL  N+ I  +++    +  +
Sbjct: 715 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 774

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA     EM+   I    V +  LIDG CK G +R A  +F  M    + P+V  YTA
Sbjct: 775 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   +  A  LF EM  + + PD+  +T LI+GY K    K+A  + N M + G
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YT+L+ GL + G L  A  L HEM   G+ P+     S++    + GN++EA+
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954

Query: 241 ELQNEMMGRGL 251
           +L  E    GL
Sbjct: 955 KLVGEFEAAGL 965



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 121/251 (48%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  ++I  D+  Y  II G C      ++  L  EM   GL  ++V  T L++ Y KAG 
Sbjct: 820  MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 879

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              +A  + + M+ +     VVT+  LIDGLCK G +  A +    M   GL PN+  Y +
Sbjct: 880  MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 939

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +++GLCK   IE A  L  E     +  DT  YT L+D Y K     +A  +   M   G
Sbjct: 940  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 999

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +   +  +  L+ G    G L++   L + M+ +GI P+     SL+K++  R N+  A 
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 1059

Query: 241  ELQNEMMGRGL 251
             +  +M  RG+
Sbjct: 1060 AIYKDMCSRGV 1070



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 115/215 (53%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            ++ ++  Y +I+ GLC     E++  L+ E +  GL A+TV  TTLMDAY K+GE  +A 
Sbjct: 930  LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             +L EML   ++ T+VTF VL++G C  G++ +       M   G+ PN   + +L+   
Sbjct: 990  EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 1049

Query: 126  CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            C +N ++ A  ++ +M  R + PD   Y  L+ G+ K  + KEA  L   M   G  + +
Sbjct: 1050 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 1109

Query: 186  NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            + Y+ L+ G  +     EAR +F +M   G+  D+
Sbjct: 1110 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 1144



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 122/248 (49%)

Query: 4    KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            K ++ D   +  +I G C     +D+  + + M + G + N V  TTL+D   K G+   
Sbjct: 858  KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917

Query: 64   ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            A  LL EM    ++  + T+  +++GLCKSG + EA+   G     GL+ +   YT L+D
Sbjct: 918  ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977

Query: 124  GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
              CK   +++A+ +  EM  + + P    +  L++G+  H   ++   L N M   G+  
Sbjct: 978  AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1037

Query: 184  DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +   + SLV       +L+ A  ++ +M  RG+ PD     +L+K H +  NM EA  L 
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097

Query: 244  NEMMGRGL 251
             EM G+G 
Sbjct: 1098 QEMKGKGF 1105



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 122/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  +C   + +++  LL  M+  G T + +  +T+++ Y + GE  +   L++ M 
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++     +  +I  LC+   + EA + F  M   G+ P+  VYT LIDG CK+  I 
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F EM  RD+ PD   YTA+I G+ +     EA  L + M   G++ D   +T L+
Sbjct: 812 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 871

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + GH+++A  + + MI  G  P+ +   +L+    + G++D A EL +EM   GL
Sbjct: 872 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 930



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 113/239 (47%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y T+I GLC E   + +  LL EM + GL  N     ++++   K+G   EA+ L+ E  
Sbjct: 902  YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 961

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             + +    VT+  L+D  CKSG + +A +    M   GL P +  +  L++G C    +E
Sbjct: 962  AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1021

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
                L + M  + + P+ T + +L+  Y    + K A  +   M   GV  D   Y +LV
Sbjct: 1022 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 1081

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             G  +  +++EA  LF EM G+G          L+K   +R    EA E+ ++M   GL
Sbjct: 1082 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 108/225 (48%), Gaps = 1/225 (0%)

Query: 28  DSKLLLSEMKENGLTANTVICTTLMDAYFK-AGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           +++ +  +M   GL  +   C   +    K   + + A+ +  E  +  +   V ++ ++
Sbjct: 636 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 695

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I  +C+ G ++EA      M   G  P+V  Y+ +++G C+   +++   L + M ++ +
Sbjct: 696 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGL 755

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P++  Y ++I    +     EA    + M   G+  D   YT+L+ G  + G ++ A  
Sbjct: 756 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 815

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            F+EM  R I PD +   +++    + G+M EA +L +EM  +GL
Sbjct: 816 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 860



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 40/207 (19%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRM---------------------------------- 106
           V F VL+D     GL+REA   F +M                                  
Sbjct: 623 VFFQVLVD----FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 678

Query: 107 --PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
             P+ G+  NVA Y  +I  +C+   I+ A +L   M  +   PD  +Y+ +++GY +  
Sbjct: 679 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
              +   L   M   G+  +   Y S++  L R   L EA   F EMI +GILPD ++  
Sbjct: 739 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 798

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L+    +RG++  A +   EM  R +
Sbjct: 799 TLIDGFCKRGDIRAASKFFYEMHSRDI 825



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 70/162 (43%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M GK ++  +  +  ++ G C+    ED + LL+ M   G+  N     +L+  Y     
Sbjct: 995  MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 1054

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               A ++  +M    +     T+  L+ G CK+  ++EA   F  M   G   +V+ Y+ 
Sbjct: 1055 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 1114

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
            LI G  K+     AR +FD+M +  +  D   +    D   K
Sbjct: 1115 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 1156



 Score = 40.4 bits (93), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 35/74 (47%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            MKGK     +  Y  +I G     KF +++ +  +M+  GL A+  I     D  +K   
Sbjct: 1100 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 1159

Query: 61   PSEALSLLDEMLDS 74
            P   +  +DE++++
Sbjct: 1160 PDTIVDPIDEIIEN 1173


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 125/248 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K     +  Y + I+GLC   +  D+   LS+M  N L  + V   TL+  Y + G   +
Sbjct: 333 KGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMK 392

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L DE+    +  T+VT+  L+DGLC+ G +  A      M + G+ P++  YT L++
Sbjct: 393 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +  A+  FDEM    +  D+ AY   I G LK      A +L+  M   G   
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 512

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           DL  Y  +V GL + G+L+EA  L  +M+  G++PD +   S++  H E G + +  E+ 
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572

Query: 244 NEMMGRGL 251
            EM+ +GL
Sbjct: 573 YEMLSKGL 580



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 114/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GL  + +FE +K L+ EM + GL  +      L+  YF  G  +EALSL +EM+
Sbjct: 272 YNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV 331

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 TV T+   I GLCK G + +A+     M    L P+V  Y  LI G C+   + 
Sbjct: 332 LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  LFDE+    + P    Y  L+DG  +    + A  LK  M   G+  D+  YT LV
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 451

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G L  A+  F EM+  G+  D     + +    + G+   A  LQ EM+ +G 
Sbjct: 452 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y  ++ G C       ++    EM   GL  ++    T +    K G+
Sbjct: 435 MINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGD 494

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A SL +EML       ++ + V++DGLCK G + EA +   +M   G+ P+   YT+
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I    +   + + R +F EM  + + P    YT LI G+      + A    + M E G
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKG 614

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y SL+ GL +   + +A   F EM+ +GI P++     L+ ++   GN  EA+
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674

Query: 241 ELQNEMMGRGL 251
            L  +M+ RG+
Sbjct: 675 SLYKQMLDRGV 685



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  D+  Y T+I+G C       + LL  E++   L    V   TL+D   + GE
Sbjct: 365 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGE 424

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EM++  I   +VT+ +L++G CK G +  A ++F  M   GL  +   Y  
Sbjct: 425 LEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYAT 484

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  K     RA +L +EM  +   PD   Y  ++DG  K  + +EA  L  +M   G
Sbjct: 485 RIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDG 544

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   YTS++      G L++ R +F+EM+ +G+ P  +    L+  H  +G ++ A 
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604

Query: 241 ELQNEMMGRGLL 252
              +EM  +G+L
Sbjct: 605 IYFSEMQEKGIL 616



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 111/207 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    DL +Y  ++ GLC     E++  LL +M  +G+  + V  T+++ A+ + G 
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +  EML   +  +VVT+ VLI G    G +  A  YF  M + G+ PNV  Y +
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +++A N F EM ++ + P+  +YT LI+      +++EAL+L  +M + G
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVL 207
           V  D   +++L+  L +   LQ  R L
Sbjct: 685 VQPDSCTHSALLKQLGKDCKLQAVRQL 711



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 120/246 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK  +  Y T++   C   K +    LLSEM+  G   N V    L++   K GE  +A 
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EML + ++V+  T+  LI G    G++ EA+     M   G  P VA Y + I GL
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +  A     +M   +++PD  +Y  LI GY +  +  +A  L + +  + +   +
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 409

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL R G L+ A+ L  EMI  GI PD +    L+    + G++  A E  +E
Sbjct: 410 VTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDE 469

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 470 MLHEGL 475



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +IW    +S  E    +  +M ++ L+ +   C  ++         S+A+ +   M +  
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I+ T+VT+  L+D  CK G V++ +D    M   G  PN   Y  LI+GL KK   E+A+
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L  EM K  +      Y  LI GY       EAL+L+  M   G    +  Y S ++GL
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + G + +A     +M+   +LPD +   +L+  +   GN+ +A  L +E+
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 400



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           I   L+  Y K     + LS+ D+M+ SR+   V     ++  L    L+ +A++ +  M
Sbjct: 166 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM 225

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            +FG+ P +  Y  L+D  CK   +++  +L  EM +R   P+   Y  LI+G  K   F
Sbjct: 226 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEF 285

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           ++A  L   M + G+ +    Y  L++G    G L EA  L  EM+ +G  P      S 
Sbjct: 286 EQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSF 345

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLL 252
           +    + G M +A++  ++M+   LL
Sbjct: 346 IYGLCKLGRMSDAMQQLSDMLANNLL 371



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 83/174 (47%)

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
           EV+V    +LI    K  +V + +  F +M    L P+V     ++  L  K+ + +A  
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           ++  M +  + P    Y  L+D Y K    ++ L+L + M   G   +   Y  L+ GLS
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLS 280

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + G  ++A+ L  EM+  G+         L+  ++ +G + EA+ LQ EM+ +G
Sbjct: 281 KKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 116/220 (52%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M+  G+  +    +T ++A+ KA +   A  + +EM      +  VT+ V+I GLC+SG 
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           V EA  +   M D+GL P+   Y AL++GLCK   ++ A+ L DEM    + P+   Y  
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L+DG++K     EA ++ N M   GV  +   Y +L+ GL + G L  A  L +EMI  G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             PD      L++ H++  + D A EL NEM   G+L  +
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNA 455



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 113/240 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC     E++     EM + GL+ +      LM+   K G   EA +LLDEM 
Sbjct: 283 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMS 342

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S ++  VV +  L+DG  K G   EA D    M   G+ PN  +Y  LI GLCK   + 
Sbjct: 343 CSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLG 402

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  L +EM K    PDT  Y  L+ G+ +H     A  L N M   G+  +   Y  ++
Sbjct: 403 RASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMI 462

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL + G  +EA  L  EMI  G+ P+  +   L+  H + G++  A E    M    +L
Sbjct: 463 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVL 522



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 133/281 (47%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   YG ++ GLC   + +++K LL EM  +GL  N V+  TL+D + K G+ +EA 
Sbjct: 311 LSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAF 370

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSG-------LVRE-------------------- 98
            +L+EM+ + ++   + +  LI GLCK G       L+ E                    
Sbjct: 371 DILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGH 430

Query: 99  --------AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
                   A +    M + G+ PN   Y  +I+GLC+    + A NL +EM    + P+ 
Sbjct: 431 FQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNA 490

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LI G+ K      A      MT+  V  DL  Y SL+ GLS  G ++EA   + +
Sbjct: 491 FMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQ 550

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  RG++PDE     L+  + +  N+++A +L  +M+  GL
Sbjct: 551 VQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGL 591



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 126/249 (50%), Gaps = 1/249 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G   K D  +YG +I  L      E + ++L+E+++NGL  +  I ++L+    K  +
Sbjct: 621 MLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMAD 680

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LLDEM    +E  +V +  LIDG C+SG +  A + F  +   GL PN   YTA
Sbjct: 681 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTA 740

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   I  A +L+ +M  R + PD   Y  L  G       ++AL L   M   G
Sbjct: 741 LIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 800

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               ++ +++LV G  + G LQE   L H M+ R I+P+     +++ +  + G + EA 
Sbjct: 801 Y-AHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAH 859

Query: 241 ELQNEMMGR 249
            +  E+  +
Sbjct: 860 RVFAELQQK 868



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C     E +  LL +M  +GL  N    T L++ YFK+ +  +  S+L  ML
Sbjct: 563 YSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSML 622

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S  +     + ++I  L +S  +  A      +   GL P++ +Y++LI GLCK   +E
Sbjct: 623 GSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADME 682

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L DEM K  + P    Y ALIDG+ +      A N+ + +   G+  +   YT+L+
Sbjct: 683 KAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALI 742

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  + G + +A  L+ +M+ RGI PD  +   L     +  ++++A+ L  EM  RG
Sbjct: 743 DGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 800



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 124/254 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  +   YG +I GLC   + +++  LL EM   GL  N  +   L+  + K G 
Sbjct: 446 MRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGH 505

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A   L+ M  + +   +  +  LI GL   G + EA +Y+ ++   GL P+   Y+ 
Sbjct: 506 ISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSG 565

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E+A  L  +M    + P+   YT L++GY K    ++  ++   M   G
Sbjct: 566 LIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSG 625

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D + Y  ++  LSR  +++ A ++  E+   G++PD  +  SL+    +  +M++A+
Sbjct: 626 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAV 685

Query: 241 ELQNEMMGRGLLSG 254
            L +EM   GL  G
Sbjct: 686 GLLDEMAKEGLEPG 699



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  DL  Y ++I GL    + E+++   +++++ GL  +    + L+  Y K   
Sbjct: 516 MTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRN 575

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL +ML+S ++    T+  L++G  KS    +       M   G  P+  +Y  
Sbjct: 576 LEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGI 635

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L +   +E A  +  E+ K  ++PD   Y++LI G  K    ++A+ L + M + G
Sbjct: 636 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEG 695

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++  +  Y +L+ G  R G +  AR +F  ++ +G+LP+ +   +L+  + + G++ +A 
Sbjct: 696 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAF 755

Query: 241 ELQNEMMGRGL 251
           +L  +M+ RG+
Sbjct: 756 DLYKDMLDRGI 766



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 122/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ +  +Y  +I GLC   +   +  LL+EM + G   +T     LM  +F+  +
Sbjct: 376 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYD 435

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL+EM +S I     T+ ++I+GLC++G  +EA +    M   GL PN  +Y  
Sbjct: 436 KDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 495

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K+  I  A    + M K +++PD   Y +LI G       +EA     ++ + G
Sbjct: 496 LIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRG 555

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y+ L+ G  +  +L++A  L  +M+  G+ P+      LL+ +++  + ++  
Sbjct: 556 LVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVS 615

Query: 241 ELQNEMMGRG 250
            +   M+G G
Sbjct: 616 SILQSMLGSG 625



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 8/211 (3%)

Query: 45  TVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG 104
           T +   L+D Y K G    A  ++  M D  + +     C   +GL K  L  +A++   
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGD--LGLAPTRRCC--NGLLKDLLRADAMELVW 230

Query: 105 RMPDF----GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           ++  F    G+ P+V  Y+  ++  CK    + A+ +F+EM +RD   +   Y  +I G 
Sbjct: 231 KLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGL 290

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            +  + +EA   K  M + G+  D   Y +L+ GL + G L+EA+ L  EM   G+ P+ 
Sbjct: 291 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNV 350

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           ++  +L+    + G   EA ++ NEM+  G+
Sbjct: 351 VVYATLVDGFMKEGKAAEAFDILNEMISAGV 381



 Score = 43.9 bits (102), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 1/145 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C      D+  L  +M + G+  +  +   L      A +  +AL L +EM 
Sbjct: 738 YTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMF 797

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + R    V  F  L+ G CK G ++E       M D  + PN      +I    K   + 
Sbjct: 798 N-RGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLC 856

Query: 133 RARNLFDEMPKRDMIPDTTAYTALI 157
            A  +F E+ ++     +T   +L+
Sbjct: 857 EAHRVFAELQQKKASQSSTDRFSLL 881


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 130/249 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           ++ + D+ +Y TII GLC +     +    SEM   G+  N +  +TL+  +  AG+   
Sbjct: 199 RSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMG 258

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A SLL+EM+   I   V T+ +LID LCK G V+EA      M   G   +V  Y +++D
Sbjct: 259 AFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLD 318

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   +++A  LF +M K  + P+   YTALIDG  K    K A  L   +   G  +
Sbjct: 319 GLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCI 378

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y  ++ GL + G   +A  +  +M   G +P+ +    +++  +E+   D+A +L 
Sbjct: 379 DVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLL 438

Query: 244 NEMMGRGLL 252
           + M+ +GLL
Sbjct: 439 HGMIAKGLL 447



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 116/236 (49%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T++ GLC++ + + S     ++   G   N V   TL++   K GE   A+ LL  + D 
Sbjct: 140 TLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDR 199

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
                VV +  +IDGLCK  +V +A D+F  M   G+ PNV  Y+ LI G C    +  A
Sbjct: 200 STRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGA 259

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            +L +EM  +++ P+   Y  LID   K    KEA  L   M   G   D+  Y S++ G
Sbjct: 260 FSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDG 319

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L +  +L +A  LF +M   GI P++    +L+    + G +  A +L   ++ +G
Sbjct: 320 LCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKG 375



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ +L     +I   C   +   S  +L ++ + G   +T+   TLM      GE
Sbjct: 91  MEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGE 150

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              +L   D+++    ++  V++  L++GLCK G  R A+     + D    P+V +Y+ 
Sbjct: 151 VKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYST 210

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   + +A + F EM  R + P+   Y+ LI G+        A +L N M    
Sbjct: 211 IIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKN 270

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y  L+  L + G ++EA+ L  EM  +G   D +   S+L    +  N+D+A 
Sbjct: 271 INPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKAT 330

Query: 241 ELQNEMMGRGL 251
            L  +M   G+
Sbjct: 331 ALFMKMKKWGI 341



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 111/235 (47%), Gaps = 1/235 (0%)

Query: 17  IWGLCIESKFEDSKLLLS-EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I G  ++ K   + + LS +M+  G+  N V    L++ +   G+ + + S+L ++L   
Sbjct: 71  ILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLG 130

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
            +   +T   L+ GLC  G V+ ++ +  ++   G   N   Y  L++GLCK      A 
Sbjct: 131 YQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAV 190

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L   +  R   PD   Y+ +IDG  K +   +A +  + M   G+  ++  Y++L+WG 
Sbjct: 191 KLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGF 250

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              G L  A  L +EMI + I P+      L+    + G + EA +L  EM  +G
Sbjct: 251 CLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKG 305



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 87/203 (42%), Gaps = 6/203 (2%)

Query: 56  FKAGEPS------EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           F +  PS      + +S  + +L  R    ++ F  ++  L K      AI    +M   
Sbjct: 35  FHSQPPSIENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVK 94

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ PN+     LI+  C    +  + ++  ++ K    PDT     L+ G       K +
Sbjct: 95  GIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRS 154

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           L+  +++   G  ++  +Y +L+ GL + G  + A  L   +  R   PD ++  +++  
Sbjct: 155 LHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDG 214

Query: 230 HYERGNMDEAIELQNEMMGRGLL 252
             +   +++A +  +EM  RG+ 
Sbjct: 215 LCKDKIVNQAYDFFSEMNARGIF 237


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 135/249 (54%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ +  +Y T+I+G+C +    D+  L SEM   G++ N V  + L+  +F  G+  
Sbjct: 188 GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLK 247

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L ++++   I+    TF +L+DG CK   ++E    F  M   G+ P+V  Y +L+
Sbjct: 248 DAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLM 307

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C    +  A+++F+ M +  + PD  +Y  LI+G+ K +   +A+NL N M    + 
Sbjct: 308 DGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNII 367

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y SL+ GLS+ G +  A  L  +M  RG+ P+ +   S++   ++   +D+AI L
Sbjct: 368 PNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIAL 427

Query: 243 QNEMMGRGL 251
             +   +G+
Sbjct: 428 ITKFKDQGI 436



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 123/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  LL  +    +  N V+  T++    K    ++A  L  EM+
Sbjct: 163 YGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMV 222

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G    G +++AID F ++    + P+   +  L+DG CK   ++
Sbjct: 223 SKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMK 282

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + +F  M K+ +IPD   Y +L+DGY   +    A ++ N M + GV+ D+ +Y  L+
Sbjct: 283 EGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 342

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   + +A  LF+EM  + I+P+ +   SL+    + G +  A++L ++M  RG+
Sbjct: 343 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGV 401



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 20/272 (7%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +NIK D   +  ++ G C + K ++ K + + M + G+  + V   +LMD Y    E + 
Sbjct: 259 ENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNT 318

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+ + M    +   + ++ +LI+G CK   V +A++ F  M    + PNV  Y +LID
Sbjct: 319 AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLID 378

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV-- 181
           GL K   I  A  L D+M  R + P+   Y ++ID   K     +A+ L  +  + G+  
Sbjct: 379 GLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQP 438

Query: 182 ------------------DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
                             D+ +N Y  ++ G  + G   EA  L  +M     +P+ +  
Sbjct: 439 SMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTY 498

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
              ++   +    D+A +L  EM+ RGLL+ S
Sbjct: 499 EITIRSLLDNNENDKAEKLFREMITRGLLNRS 530



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 20/173 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI  ++  Y ++I GL    +   +  L+ +M + G+  N +   +++DA FK  +
Sbjct: 361 MHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQ 420

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGL--------------------CKSGLVREAI 100
             +A++L+ +  D  I+ ++ T+ +LIDGL                    CK GL  EA+
Sbjct: 421 VDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEAL 480

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
               +M D    PN   Y   I  L   N  ++A  LF EM  R ++  + +Y
Sbjct: 481 SLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLLNRSASY 533


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 125/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +  +Y  +I G C + K + + L    M E G+         L+ A F  G  +EA 
Sbjct: 582 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 641

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L++EM    +   V T+ +LI+G CK G V++A++ F  M   G+   V  YTALI  L
Sbjct: 642 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYAL 701

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            KK  ++    LFDE  +R + PD   Y ALI+ +    +   A  +   M +  +  D 
Sbjct: 702 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 761

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL   G + EAR L  EM  RGI PD +   +L+  +  +G++ +A+ ++NE
Sbjct: 762 VTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 821

Query: 246 MMGRGL 251
           MM +G 
Sbjct: 822 MMNKGF 827



 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 120/236 (50%), Gaps = 2/236 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y T+I G C   + + +  ++ EM+E  G+  N     T++  + K G   EA+ + DEM
Sbjct: 517 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 576

Query: 72  L-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           L    ++   V +  LI G C  G +  A+ Y  RM + G+   VA Y  L+  L     
Sbjct: 577 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 636

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A  L +EM  + + PD   Y  LI+G+ K  + K+AL +   M+  GV   +  YT+
Sbjct: 637 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 696

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L++ LS+ G +QE   LF E + RGI PD +L  +L+  H   GN+D A E+  EM
Sbjct: 697 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 108/228 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  Y  +I G C E   + +  +   M   G+ A  V  T L+ A  K G+
Sbjct: 647 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 706

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L DE +   I   +V +  LI+    SG +  A +  G M    + P+   Y  
Sbjct: 707 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 766

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    ++ AR L DEM +R + PD   Y  LI GY      K+AL ++N M   G
Sbjct: 767 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 826

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
            +  L  Y +L+ GL + G   +A  +  EM+  GI PD+   ISL++
Sbjct: 827 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 874



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 104/211 (49%), Gaps = 10/211 (4%)

Query: 47  ICTTLMDAYFK----AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +CTT  +   +    AG+P+ AL LL +M         VT+  +I G C  G V+ A+D 
Sbjct: 481 LCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDI 536

Query: 103 FGRMPDFG-LHPNVAVYTALIDGLCKKNCIERARNLFDEM-PKRDMIPDTTAYTALIDGY 160
              M + G + PN   Y  +I G CK   ++ A  +FDEM  K ++ P+   Y ALI GY
Sbjct: 537 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 596

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
                   AL  ++RM E GV + +  Y  LV  L   G   EA  L  EM G+G+ PD 
Sbjct: 597 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 656

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                L+  H + GN+ +A+E+   M  RG+
Sbjct: 657 FTYNILINGHCKEGNVKKALEIFENMSRRGV 687



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   +  Y  ++  L ++ +  ++  L+ EM   GL  +      L++ + K G 
Sbjct: 612 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 671

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + + M    +  TVVT+  LI  L K G V+E    F      G+ P++ +Y A
Sbjct: 672 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 731

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+       I+RA  +  EM K+ + PD   Y  L+ G        EA  L + MTE G
Sbjct: 732 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 791

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y +L+ G S  G +++A  + +EM+ +G  P  +   +L++   + G  D+A 
Sbjct: 792 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 851

Query: 241 ELQNEMMGRGL 251
            +  EM+  G+
Sbjct: 852 NMVKEMVENGI 862



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++A +  Y  +I+ L  + + +++  L  E    G+  + V+   L++++  +G 
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  ++ EM   RI    VT+  L+ GLC  G V EA      M + G+ P++  Y  
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G   K  ++ A  + +EM  +   P    Y ALI G  K+    +A N+   M E G
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 861

Query: 181 VDLDLNAYTSLVWGLS 196
           +  D + Y SL+ GL+
Sbjct: 862 ITPDDSTYISLIEGLT 877


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 36/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
           M   N +A+  +Y TII GLC   +   +K +L  + KE   + +     +++D + K G
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +   A+    EM ++     VVTF  LI+G CKS  +  A++    M    L  ++  Y 
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ALIDG CKKN ++ A  LF E+P+  ++P+ + Y +LI G+        A++L  +M   
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND 724

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL------------- 226
           G+  DL  YT+++ GL + G++  A  L+ E++  GI+PDEIL + L             
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKA 784

Query: 227 ------LKK----------------HYERGNMDEAIELQNEMMGRGLL 252
                 +KK                H+  GN++EA  L +EM+ +G++
Sbjct: 785 SKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 102/194 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +K DLP YG +I G C ++  + +  L SE+ E GL  N  +  +L+  +   G+
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  +M++  I   + T+  +IDGL K G +  A D +  + D G+ P+  ++  
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GL KK    +A  + +EM K+D+ P+   Y+ +I G+ +  +  EA  L + M E G
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830

Query: 181 VDLDLNAYTSLVWG 194
           +  D   +  LV G
Sbjct: 831 IVHDDTVFNLLVSG 844



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 35/256 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G       + +     EM ENG + N V  T+L++ + K+     AL +  EM 
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-------------- 118
              +++ +  +  LIDG CK   ++ A   F  +P+ GL PNV+VY              
Sbjct: 653 SMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712

Query: 119 ---------------------TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                T +IDGL K   I  A +L+ E+    ++PD   +  L+
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLV 772

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +G  K   F +A  +   M +  V  ++  Y++++ G  R G+L EA  L  EM+ +GI+
Sbjct: 773 NGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832

Query: 218 PDEILCISLLKKHYER 233
            D+ +   L+    E+
Sbjct: 833 HDDTVFNLLVSGRVEK 848



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 2/221 (0%)

Query: 32  LLSEMKEN-GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           LL EM+   G+ A+    T+++ A+ K G   EA+ ++DEM+   I ++V+    L++G 
Sbjct: 296 LLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGY 355

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           CK   + +A+D F RM + GL P+  +++ +++  CK   +E+A   +  M    + P +
Sbjct: 356 CKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSS 415

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
                +I G LK ES + AL + N   E  +         +     + G +  A      
Sbjct: 416 VLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKM 474

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  +GI P+ +   +++  H    NMD A  + +EM+ +GL
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 116/253 (45%), Gaps = 6/253 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D  ++  ++   C   + E +      MK   +  ++V+  T++    KA  
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P  AL + ++  +S I    +   + +   CK G V  A  +   M   G+ PNV  Y  
Sbjct: 431 PEAALEIFNDSFESWIAHGFMCNKIFL-LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNN 489

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++   C+   ++ AR++F EM ++ + P+   Y+ LIDG+ K++  + A ++ N+M    
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN 549

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI---SLLKKHYERGNMD 237
            + +   Y +++ GL + G   +A+ +   +I        + C    S++    + G+ D
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRY--SMSCTSYNSIIDGFVKVGDTD 607

Query: 238 EAIELQNEMMGRG 250
            A+E   EM   G
Sbjct: 608 SAVETYREMSENG 620



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 113/246 (45%), Gaps = 1/246 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   +P    ++  L   +  +++K + ++M   G+  + V    LM A  +  +
Sbjct: 195 MVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERK 254

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYT 119
           P EA+ +   ++    E   + F + +   CK+  +  A+D    M    G+  +   YT
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYT 314

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++I    K+  +E A  + DEM    +     A T+L++GY K     +AL+L NRM E 
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D   ++ +V    +   +++A   +  M    I P  +L  ++++   +  + + A
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAA 434

Query: 240 IELQNE 245
           +E+ N+
Sbjct: 435 LEIFND 440



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 23/245 (9%)

Query: 14  GTIIWGL------CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           G + W L       I +    S LL+  +  N      V+   L+D+  + G        
Sbjct: 113 GDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFG-------- 164

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
                    E+T   F  L++   ++  +  A+D FG M D  + P V     ++  L +
Sbjct: 165 --------FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVR 216

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
            N I+ A+ ++++M    +  D      L+   L+    +EA+ +  R+   G + D   
Sbjct: 217 SNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLL 276

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           ++  V    +   L  A  L  EM G+ G+   +    S++    + GNM+EA+ + +EM
Sbjct: 277 FSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEM 336

Query: 247 MGRGL 251
           +G G+
Sbjct: 337 VGFGI 341



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 3/203 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L++AY +      A+     M+D ++   V     ++  L +S L+ EA + + +M   G
Sbjct: 175 LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIG 234

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           +  +      L+    ++   E A  +F  +  R   PD   ++  +    K      AL
Sbjct: 235 VAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMAL 294

Query: 171 NLKNRMT-EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           +L   M  ++GV      YTS++    + G+++EA  +  EM+G GI P  ++  + L  
Sbjct: 295 DLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGI-PMSVIAATSLVN 353

Query: 230 HYERGN-MDEAIELQNEMMGRGL 251
            Y +GN + +A++L N M   GL
Sbjct: 354 GYCKGNELGKALDLFNRMEEEGL 376



 Score = 42.0 bits (97), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 59/128 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  DL  Y T+I GL  +     +  L SE+ + G+  + ++   L++   K G+
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +L+EM    +   V+ +  +I G  + G + EA      M + G+  +  V+  
Sbjct: 781 FLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNL 840

Query: 121 LIDGLCKK 128
           L+ G  +K
Sbjct: 841 LVSGRVEK 848


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +   D  +Y T++ GLC   + E++++LL E   NG   N V+   L+D Y  AGE
Sbjct: 168 MRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE 227

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL + + M  +R    V T+  LI GLCKSG V  A+  F RM + GL PNV  YTA
Sbjct: 228 MEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA 287

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C +  ++ A  L   M    ++P+   ++ LID   K E  +EA      + + G
Sbjct: 288 LIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKG 347

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V ++   YTSL+ GL + G +  A  L  +MI  G +PD     SL+     +  + +A 
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407

Query: 241 ELQNEMMGRGL 251
            +  +MM +G+
Sbjct: 408 LMLEDMMEKGI 418



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     ++  Y  +I GLC   K E + +L S M E GL  N V  T L+      G 
Sbjct: 238 MDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGH 297

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL  M  + +     TF VLID LCK   V EA  + G +   G+  N  VYT+
Sbjct: 298 LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I+ A  L  +M     +PD  +Y++LIDG  + +   +A  +   M E G
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YT ++  L R    +  + +F +MI  GI PD +     ++ + E G M++A 
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477

Query: 241 ELQNEMMGRGLL 252
            +  +M+ RG+ 
Sbjct: 478 SMIVQMVDRGVF 489



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 125/250 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ ++  Y  +I G C E   + +  LL  M+ NGL  N    + L+DA  K  +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   L  ++   ++V  V +  LIDGLCK+G +  A +   +M   G  P+   Y++
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC++  + +A  + ++M ++ +      YT +ID  ++    +    + ++M   G
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATG 452

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  YT  V      G +++A  +  +M+ RG+ P+ +   +L++ +   G + +A 
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAF 512

Query: 241 ELQNEMMGRG 250
                M+G+G
Sbjct: 513 STFEVMVGKG 522



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 115/230 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC   K E+++L L  + + G+  N V+ T+L+D   K G+   A  L+ +M+
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI 379

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                    ++  LIDGLC+   + +A      M + G+  +   YT +ID L ++   E
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + +FD+M    + PD   YT  +  Y +    ++A ++  +M + GV  +L  Y +L+
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            G +  G + +A   F  M+G+G  P+E     LL+   ++ + D ++++
Sbjct: 500 RGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 123/286 (43%), Gaps = 39/286 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N++     Y T+I   C+      +K  L+ +   GL  ++   T+ +  Y +AG 
Sbjct: 67  MPARNLRT----YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGM 122

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF----- 109
            + A  +   M       T  T+  L+ GL  +G+VREA+  F  M      PD      
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYAT 182

Query: 110 ------------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                   G  PN+ VY ALIDG C    +E A  +F+ M    
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   YT LI G  K    + A+ L +RM E G++ ++  YT+L+ G    GHLQ A 
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L H M   G++P++     L+    +R  ++EA      ++ +G+
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGV 348



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 118/245 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GL       ++  +   M+ +    +T +  T++    +AG   EA  LL+E +
Sbjct: 145 YTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  E  +V +  LIDG C +G +  A+  F  M      PNV  YT LI GLCK   +E
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  LF  M +  + P+   YTALI G       + A  L + M   G+  +   ++ L+
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L +   ++EA++    ++ +G+  +E++  SL+    + G +D A EL  +M+  G +
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384

Query: 253 SGSKN 257
             + +
Sbjct: 385 PDAHS 389



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 12/239 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D   Y ++I GLC + K   + L+L +M E G+ A+ V  T ++D   +   
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 + D+M+ + I   +VT+ V +   C+ G + +A     +M D G+ PN+  Y  
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN--------- 171
           LI G      + +A + F+ M  +   P+  +YT L+   +K  S   +++         
Sbjct: 498 LIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKD 557

Query: 172 ---LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
              L   +TE  + L  + Y+  +  L R   L+EA+  F  M    + P E +  S++
Sbjct: 558 LQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 12/170 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  Y   +   C E + ED++ ++ +M + G+  N V   TL+  Y   G 
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF--GRMPDFGLH------ 112
            S+A S  + M+    +    ++ VL+  + K      ++D +    M D  +       
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITE 567

Query: 113 ---PNVA-VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
              P  A +Y+  I  LC+ + +E A++ F  M   ++ P    YT++ID
Sbjct: 568 RQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 130/246 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K  +  + T+I GLCIE +  ++   L  +   G        T +++   K G+ S A+
Sbjct: 170 FKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAI 229

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             + +M++   E  VV++ ++ID LCK+ LV EA+D F  M   G+ P V  Y +LI G+
Sbjct: 230 VWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGM 289

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C     ++A  LF EM + +M PD   ++ L+D   K     EAL++  +M ++ ++ D+
Sbjct: 290 CNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDI 349

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+SL+ G+ +    +E+  L +EM+ R I PD +     +    ++G + EA  + N 
Sbjct: 350 VTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINL 409

Query: 246 MMGRGL 251
           M+ RGL
Sbjct: 410 MIERGL 415



 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 130/277 (46%), Gaps = 35/277 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I   +  Y ++I+G+C   +++ + +L  EM E  +  + V  + L+DA  K G 
Sbjct: 270 MRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGV 329

Query: 61  PSEALS-----------------------------------LLDEMLDSRIEVTVVTFCV 85
             EALS                                   LL+EML   I   VVTF +
Sbjct: 330 VLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSI 389

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
            +D  CK G+V EA      M + GL PNV  Y +L+DG C  + ++ AR +FD M  + 
Sbjct: 390 WVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKG 449

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             PD  +Y  LI GY K E   EA  L + M+  G+  +   +T+L+ GL + G    A+
Sbjct: 450 CAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAK 509

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            LF +M   G  PD I   +LL    + G++DEA+ L
Sbjct: 510 ELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALAL 546



 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 128/243 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II  LC      ++  L   M+  G++   V   +L+     +G+  +A  L  EML
Sbjct: 247 YSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEML 306

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  ++  VVTF +L+D LCK G+V EA+  FG+M    + P++  Y++LI G+CK +  +
Sbjct: 307 EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            +  L +EM  R++ PD   ++  +D + K     EA ++ N M E G+  ++  Y SL+
Sbjct: 367 ESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLM 426

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G      + EAR +F  M+ +G  PD +    L+K + +   +DEA +L +EM  +GL 
Sbjct: 427 DGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLT 486

Query: 253 SGS 255
             S
Sbjct: 487 PNS 489



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 124/237 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  Y ++I G+C  S +++S  LL+EM    +  + V  +  +D + K G  SEA 
Sbjct: 345 MEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQ 404

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S+++ M++  +   VVT+  L+DG C    + EA   F  M + G  P+V  Y  LI G 
Sbjct: 405 SIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGY 464

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   I+ A+ LFDEM  + + P++  +T LI G  +      A  L  +M   G   DL
Sbjct: 465 CKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDL 524

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             Y++L+ G  + GHL EA  LF  +    + P+ ++C  LL    + G +++A EL
Sbjct: 525 ITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKEL 581



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 105/219 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI+ D+  +   +   C +    +++ +++ M E GL  N V   +LMD Y    +
Sbjct: 375 MLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQ 434

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + D M++      V+++ +LI G CKS  + EA   F  M   GL PN   +T 
Sbjct: 435 MDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTT 494

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC+      A+ LF +M      PD   Y+ L+ G+ KH    EAL L   + +  
Sbjct: 495 LISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQ 554

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  +      L+ G+ + G L++A+ LF  +    + PD
Sbjct: 555 LKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 105/213 (49%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +M+  G++ +    T L++            S+L ++     + +++TF  LI+GLC  G
Sbjct: 129 KMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEG 188

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + EA++    +   G  P V  +T +++GLCK      A     +M + D  P+  +Y+
Sbjct: 189 RIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYS 248

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +ID   K+    EA++L   M  +G+   +  Y SL++G+   G  ++A +LF EM+  
Sbjct: 249 IIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEW 308

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            + PD +    L+    + G + EA+ +  +M+
Sbjct: 309 NMKPDVVTFSILVDALCKEGVVLEALSVFGKMI 341



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 59/115 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  +   + T+I GLC   +   +K L  +M  +G   + +  +TL+  + K G 
Sbjct: 480 MSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGH 539

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
             EAL+L + +  S+++   V   +L+ G+CK+G + +A + F  +    L P+V
Sbjct: 540 LDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/189 (19%), Positives = 78/189 (41%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL+  ++M+       +  F  L+  L +       +  + +M  FG+  +V   T LI
Sbjct: 87  DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILI 146

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC  + +    ++  ++ K    P    +  LI+G        EA+   + +   G  
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ 206

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             +  +T +V GL + G    A V   +M+     P+ +    ++    +   ++EA++L
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDL 266

Query: 243 QNEMMGRGL 251
              M   G+
Sbjct: 267 FYHMRSIGI 275


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 126/277 (45%), Gaps = 35/277 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C E    D+KL+ +E+++ GL   TV   TL++   K+    E   L   M 
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG-------- 124
           ++RI   V T+ VLI GLCK G +  A   F  M   GL PN   +TALIDG        
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345

Query: 125 ---------------------------LCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                      LCK   + +AR L DEM    M PD   YT LI
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DGY K    + A+ ++  M E GV LD  A+T+L+ G  R G +++A     EM+  G+ 
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           PD+     ++  + ++GN+    +L  EM   G   G
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPG 502



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 119/221 (53%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
             SE+ E G          L++ + K G   +A  + +E+    +  T V+F  LI+GLC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KS  + E       M +  ++P+V  Y+ LI GLCK+  ++ A  LFDEM +R + P+  
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +TALIDG  +      A+N  ++M  +GV  DL  Y +L+ GL + G + +AR L  EM
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              G+ PD+I   +L+  + + G+++ A+E++  M   G++
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 126/280 (45%), Gaps = 35/280 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  D+  Y  +I GLC E + + ++ L  EM++ GL  N +  T L+D  +++  
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRR 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A++   +ML   ++  +V +  L++GLCK G V +A      M   G+ P+   YT 
Sbjct: 344 MDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTT 403

Query: 121 LIDGLCKKNCIERARNL-----------------------------------FDEMPKRD 145
           LIDG CK+  +E A  +                                     EM +  
Sbjct: 404 LIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAG 463

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           M PD   YT +IDGY K  + K    L   M   G    +  Y  L+ GL + G ++ A 
Sbjct: 464 MKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNAN 523

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
           +L   M+  G+ PD+I    LL+ H + G  ++ ++L+NE
Sbjct: 524 MLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 102/212 (48%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   +  +   LM AY+ +G  S+A+     + +S  ++       L+D +  S      
Sbjct: 148 GTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTI 207

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
             ++  + ++G  P V  Y  LI+  CK+  I  A+ +F+E+ KR + P T ++  LI+G
Sbjct: 208 WTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K  +  E   LK  M E  +  D+  Y+ L+ GL + G L  A  LF EM  RG+ P+
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            I   +L+   Y    MD A+   ++M+  G+
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGV 359


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +   D  +Y T++ GLC   + E++++LL E   NG   N V+   L+D Y  AGE
Sbjct: 168 MRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE 227

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL + + M  +R    V T+  LI GLCKSG V  A+  F RM + GL PNV  YTA
Sbjct: 228 MEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA 287

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C +  ++ A  L   M    ++P+   ++ LID   K E  +EA      + + G
Sbjct: 288 LIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKG 347

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V ++   YTSL+ GL + G +  A  L  +MI  G +PD     SL+     +  + +A 
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407

Query: 241 ELQNEMMGRGL 251
            +  +MM +G+
Sbjct: 408 LMLEDMMEKGI 418



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     ++  Y  +I GLC   K E + +L S M E GL  N V  T L+      G 
Sbjct: 238 MDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGH 297

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL  M  + +     TF VLID LCK   V EA  + G +   G+  N  VYT+
Sbjct: 298 LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I+ A  L  +M     +PD  +Y++LIDG  + +   +A  +   M E G
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YT ++  L R    +  + +F +MI  GI PD +     ++ + E G M++A 
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477

Query: 241 ELQNEMMGRGLL 252
            +  +M+ RG+ 
Sbjct: 478 SMIVQMVDRGVF 489



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 125/250 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ ++  Y  +I G C E   + +  LL  M+ NGL  N    + L+DA  K  +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   L  ++   ++V  V +  LIDGLCK+G +  A +   +M   G  P+   Y++
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC++  + +A  + ++M ++ +      YT +ID  ++    +    + ++M   G
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATG 452

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  YT  V      G +++A  +  +M+ RG+ P+ +   +L++ +   G + +A 
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAF 512

Query: 241 ELQNEMMGRG 250
                M+G+G
Sbjct: 513 STFEVMVGKG 522



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 115/230 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC   K E+++L L  + + G+  N V+ T+L+D   K G+   A  L+ +M+
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI 379

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                    ++  LIDGLC+   + +A      M + G+  +   YT +ID L ++   E
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + +FD+M    + PD   YT  +  Y +    ++A ++  +M + GV  +L  Y +L+
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            G +  G + +A   F  M+G+G  P+E     LL+   ++ + D ++++
Sbjct: 500 RGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 123/286 (43%), Gaps = 39/286 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N++     Y T+I   C+      +K  L+ +   GL  ++   T+ +  Y +AG 
Sbjct: 67  MPARNLRT----YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGM 122

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF----- 109
            + A  +   M       T  T+  L+ GL  +G+VREA+  F  M      PD      
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182

Query: 110 ------------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                   G  PN+ VY ALIDG C    +E A  +F+ M    
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   YT LI G  K    + A+ L +RM E G++ ++  YT+L+ G    GHLQ A 
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L H M   G++P++     L+    +R  ++EA      ++ +G+
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGV 348



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 116/240 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GL       ++  +   M+ +    +T +  T++    +AG   EA  LL+E +
Sbjct: 145 YTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  E  +V +  LIDG C +G +  A+  F  M      PNV  YT LI GLCK   +E
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  LF  M +  + P+   YTALI G       + A  L + M   G+  +   ++ L+
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L +   ++EA++    ++ +G+  +E++  SL+    + G +D A EL  +M+  G +
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384



 Score = 87.8 bits (216), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 12/264 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D   Y ++I GLC + K   + L+L +M E G+ A+ V  T ++D   +   
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 + D+M+ + I   +VT+ V +   C+ G + +A     +M D G+ PN+  Y  
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN--------- 171
           LI G      + +A + F+ M  +   P+  +YT L+   +K  S   +++         
Sbjct: 498 LIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKD 557

Query: 172 ---LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
              L   +TE  + L  + Y+  +  L R   L+EA+  F  M    + P E +  S++ 
Sbjct: 558 LQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617

Query: 229 KHYERGNMDEAIELQNEMMGRGLL 252
                  + +A+ L + M   G L
Sbjct: 618 CCCRLKILTDALTLLDSMTKSGYL 641



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 12/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  Y   +   C E + ED++ ++ +M + G+  N V   TL+  Y   G 
Sbjct: 448 MIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGL 507

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF--GRMPDFGLH------ 112
            S+A S  + M+    +    ++ VL+  + K      ++D +    M D  +       
Sbjct: 508 VSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITE 567

Query: 113 ---PNVA-VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
              P  A +Y+  I  LC+ + +E A++ F  M   ++ P    YT++ID   + +   +
Sbjct: 568 RQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTD 627

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           AL L + MT+ G    L +Y  ++  L   G+ + A+ +F +++ +    DEI+   L+ 
Sbjct: 628 ALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIY 687

Query: 229 KHYERGNMDEAIELQNEMMGRG 250
              ++G++ E   L + M   G
Sbjct: 688 GLLQKGSVAEFSSLLSVMKEHG 709


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 125/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +  +Y  +I G C + K + + L    M E G+         L+ A F  G  +EA 
Sbjct: 587 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAY 646

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L++EM    +   V T+ +LI+G CK G V++A++ F  M   G+   V  YTALI  L
Sbjct: 647 ELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYAL 706

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            KK  ++    LFDE  +R + PD   Y ALI+ +    +   A  +   M +  +  D 
Sbjct: 707 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 766

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL   G + EAR L  EM  RGI PD +   +L+  +  +G++ +A+ ++NE
Sbjct: 767 VTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 826

Query: 246 MMGRGL 251
           MM +G 
Sbjct: 827 MMNKGF 832



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 120/236 (50%), Gaps = 2/236 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y T+I G C   + + +  ++ EM+E  G+  N     T++  + K G   EA+ + DEM
Sbjct: 522 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 581

Query: 72  L-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           L    ++   V +  LI G C  G +  A+ Y  RM + G+   VA Y  L+  L     
Sbjct: 582 LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGR 641

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A  L +EM  + + PD   Y  LI+G+ K  + K+AL +   M+  GV   +  YT+
Sbjct: 642 GTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTA 701

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L++ LS+ G +QE   LF E + RGI PD +L  +L+  H   GN+D A E+  EM
Sbjct: 702 LIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 108/228 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  Y  +I G C E   + +  +   M   G+ A  V  T L+ A  K G+
Sbjct: 652 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 711

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L DE +   I   +V +  LI+    SG +  A +  G M    + P+   Y  
Sbjct: 712 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 771

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    ++ AR L DEM +R + PD   Y  LI GY      K+AL ++N M   G
Sbjct: 772 LMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 831

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
            +  L  Y +L+ GL + G   +A  +  EM+  GI PD+   ISL++
Sbjct: 832 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIE 879



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 104/211 (49%), Gaps = 10/211 (4%)

Query: 47  ICTTLMDAYFK----AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +CTT  +   +    AG+P+ AL LL +M         VT+  +I G C  G V+ A+D 
Sbjct: 486 LCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDI 541

Query: 103 FGRMPDFG-LHPNVAVYTALIDGLCKKNCIERARNLFDEM-PKRDMIPDTTAYTALIDGY 160
              M + G + PN   Y  +I G CK   ++ A  +FDEM  K ++ P+   Y ALI GY
Sbjct: 542 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 601

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
                   AL  ++RM E GV + +  Y  LV  L   G   EA  L  EM G+G+ PD 
Sbjct: 602 CDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDV 661

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                L+  H + GN+ +A+E+   M  RG+
Sbjct: 662 FTYNILINGHCKEGNVKKALEIFENMSRRGV 692



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   +  Y  ++  L ++ +  ++  L+ EM   GL  +      L++ + K G 
Sbjct: 617 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 676

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + + M    +  TVVT+  LI  L K G V+E    F      G+ P++ +Y A
Sbjct: 677 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 736

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+       I+RA  +  EM K+ + PD   Y  L+ G        EA  L + MTE G
Sbjct: 737 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 796

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y +L+ G S  G +++A  + +EM+ +G  P  +   +L++   + G  D+A 
Sbjct: 797 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 856

Query: 241 ELQNEMMGRGL 251
            +  EM+  G+
Sbjct: 857 NMVKEMVENGI 867



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++A +  Y  +I+ L  + + +++  L  E    G+  + V+   L++++  +G 
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 746

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  ++ EM   RI    VT+  L+ GLC  G V EA      M + G+ P++  Y  
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G   K  ++ A  + +EM  +   P    Y ALI G  K+    +A N+   M E G
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENG 866

Query: 181 VDLDLNAYTSLVWGLS 196
           +  D + Y SL+ GL+
Sbjct: 867 ITPDDSTYISLIEGLT 882


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 125/248 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K     +  Y + I+GLC   +  D+   LS+M  N L  + V   TL+  Y + G   +
Sbjct: 333 KGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMK 392

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L DE+    +  T+VT+  L+DGLC+ G +  A      M + G+ P++  YT L++
Sbjct: 393 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 452

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +  A+  FDEM    +  D+ AY   I G LK      A +L+  M   G   
Sbjct: 453 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 512

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           DL  Y  +V GL + G+L+EA  L  +M+  G++PD +   S++  H E G + +  E+ 
Sbjct: 513 DLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF 572

Query: 244 NEMMGRGL 251
            EM+ +GL
Sbjct: 573 YEMLSKGL 580



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 114/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GL  + +FE +K L+ EM + GL  +      L+  YF  G  +EALSL +EM+
Sbjct: 272 YNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMV 331

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 TV T+   I GLCK G + +A+     M    L P+V  Y  LI G C+   + 
Sbjct: 332 LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 391

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  LFDE+    + P    Y  L+DG  +    + A  LK  M   G+  D+  YT LV
Sbjct: 392 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 451

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G L  A+  F EM+  G+  D     + +    + G+   A  LQ EM+ +G 
Sbjct: 452 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y  ++ G C       ++    EM   GL  ++    T +    K G+
Sbjct: 435 MINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGD 494

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A SL +EML       ++ + V++DGLCK G + EA +   +M   G+ P+   YT+
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I    +   + + R +F EM  + + P    YT LI G+      + A    + M E G
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKG 614

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y SL+ GL +   + +A   F EM+ +GI P++     L+ ++   GN  EA+
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEAL 674

Query: 241 ELQNEMMGRGL 251
            L  +M+ RG+
Sbjct: 675 SLYKQMLDRGV 685



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  D+  Y T+I+G C       + LL  E++   L    V   TL+D   + GE
Sbjct: 365 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGE 424

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EM++  I   +VT+ +L++G CK G +  A ++F  M   GL  +   Y  
Sbjct: 425 LEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYAT 484

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  K     RA +L +EM  +   PD   Y  ++DG  K  + +EA  L  +M   G
Sbjct: 485 RIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDG 544

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   YTS++      G L++ R +F+EM+ +G+ P  +    L+  H  +G ++ A 
Sbjct: 545 VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAF 604

Query: 241 ELQNEMMGRGLL 252
              +EM  +G+L
Sbjct: 605 IYFSEMQEKGIL 616



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 120/246 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK  +  Y T++   C   K +    LLSEM+  G   N V    L++   K GE  +A 
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EML + ++V+  T+  LI G    G++ EA+     M   G  P VA Y + I GL
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +  A     +M   +++PD  +Y  LI GY +  +  +A  L + +  + +   +
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 409

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL R G L+ A+ L  EMI  GI PD +    L+    + G++  A E  +E
Sbjct: 410 VTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDE 469

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 470 MLHEGL 475



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 109/202 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    DL +Y  ++ GLC     E++  LL +M  +G+  + V  T+++ A+ + G 
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +  EML   +  +VVT+ VLI G    G +  A  YF  M + G+ PNV  Y +
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +++A N F EM ++ + P+  +YT LI+      +++EAL+L  +M + G
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 181 VDLDLNAYTSLVWGLSRCGHLQ 202
           V  D   +++L+  L +   LQ
Sbjct: 685 VQPDSCTHSALLKQLGKDCKLQ 706



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 115/240 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ GLC + + E ++ L  EM   G+  + V  T L++   K G  S A    DEML
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +E+    +   I G  K G    A      M   G  P++ +Y  ++DGLCK   +E
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  +M    +IPD   YT++I  +L++   ++   +   M   G+   +  YT L+
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G +  G L+ A + F EM  +GILP+ I   SL+    +   MD+A     EM+ +G+ 
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIF 651



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +IW    +S  E    +  +M ++ L+ +   C  ++         S+A+ +   M +  
Sbjct: 170 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 229

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I+ T+VT+  L+D  CK G V++ +D    M   G  PN   Y  LI+GL KK   E+A+
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L  EM K  +      Y  LI GY       EAL+L+  M   G    +  Y S ++GL
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGL 349

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + G + +A     +M+   +LPD +   +L+  +   GN+ +A  L +E+
Sbjct: 350 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 400



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           I   L+  Y K     + LS+ D+M+ SR+   V     ++  L    L+ +A++ +  M
Sbjct: 166 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM 225

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            +FG+ P +  Y  L+D  CK   +++  +L  EM +R   P+   Y  LI+G  K   F
Sbjct: 226 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEF 285

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           ++A  L   M + G+ +    Y  L++G    G L EA  L  EM+ +G  P      S 
Sbjct: 286 EQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSF 345

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLL 252
           +    + G M +A++  ++M+   LL
Sbjct: 346 IYGLCKLGRMSDAMQQLSDMLANNLL 371



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 83/174 (47%)

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
           EV+V    +LI    K  +V + +  F +M    L P+V     ++  L  K+ + +A  
Sbjct: 161 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 220

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           ++  M +  + P    Y  L+D Y K    ++ L+L + M   G   +   Y  L+ GLS
Sbjct: 221 VYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLS 280

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + G  ++A+ L  EM+  G+         L+  ++ +G + EA+ LQ EM+ +G
Sbjct: 281 KKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 119/217 (54%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+ + G   N  +   LM  + K G+   A  + DE+    +  +VV+F  LI G C+S 
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSK 275

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            V E       M    + P+V  Y+ALI+GLCK++ +E A  LFDEM +  ++P+   +T
Sbjct: 276 NVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFT 335

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LIDG  KH     AL     M + G+  DL  Y +L+ GL R G L+EAR L +EMIG 
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGN 395

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  PD+I   +L+    + G+MD A+E+++ M+  G+
Sbjct: 396 GFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGI 432



 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 129/251 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++  +  + T+I G C     E+  +L S M+   ++ +    + L++   K     E
Sbjct: 255 RGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEE 314

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L DEM +  +    VTF  LIDG CK G +  A+  F  M D G+ P++  Y ALI+
Sbjct: 315 ANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALIN 374

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC+   ++ AR L +EM      PD   +T L+DG  K      AL +K+RM E G++L
Sbjct: 375 GLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIEL 434

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D  A+T+L+ GL R G +++A  +  +M+  G  PD+     ++    ++G++    +L 
Sbjct: 435 DDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLL 494

Query: 244 NEMMGRGLLSG 254
            EM   G + G
Sbjct: 495 KEMQRDGRVPG 505



 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 35/235 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I+ DL  Y  +I GLC +   ++++ LL+EM  NG   + +  TTLMD   K G+
Sbjct: 357 MKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGD 416

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL + D M++  IE+  V F  LI GLC+ G VR+A      M   G  P+   YT 
Sbjct: 417 MDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTM 476

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  CKK  ++    L  EM +   +P    Y AL++G+ K                  
Sbjct: 477 VIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQ----------------- 519

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
                             G ++ A++L H M+   ++P++I    LL  H + G+
Sbjct: 520 ------------------GQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS 556



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 119/247 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  D+  Y  +I GLC ES+ E++  L  EM E GL  N V  TTL+D   K G+
Sbjct: 287 MESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGK 346

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL   + M D  I   ++T+  LI+GLC+ G ++EA      M   G  P+   +T 
Sbjct: 347 IDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTT 406

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG CK   ++ A  + D M +  +  D  A+TALI G  +    ++A  +   M   G
Sbjct: 407 LMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAG 466

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   YT ++    + G ++    L  EM   G +P  +   +L+    ++G M  A 
Sbjct: 467 HKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAK 526

Query: 241 ELQNEMM 247
            L + M+
Sbjct: 527 MLLHAML 533



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 82/151 (54%)

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           +++  + D+G  PNV ++  L+ G CK   +  AR +FDE+ +R + P   ++  LI GY
Sbjct: 212 EFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGY 271

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            + ++ +E   LK+ M    +  D+  Y++L+ GL +   ++EA  LF EM   G++P+ 
Sbjct: 272 CRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNG 331

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   +L+    + G +D A+     M  RG+
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGI 362


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +   D  +Y T++ GLC   + E++++LL E   NG   N V+   L+D Y  AGE
Sbjct: 168 MRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE 227

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL + + M  +R    V T+  LI GLCKSG V  A+  F RM + GL PNV  YTA
Sbjct: 228 MEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA 287

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C +  ++ A  L   M    ++P+   ++ LID   K E  +EA      + + G
Sbjct: 288 LIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKG 347

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V ++   YTSL+ GL + G +  A  L  +MI  G +PD     SL+     +  + +A 
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407

Query: 241 ELQNEMMGRGL 251
            +  +MM +G+
Sbjct: 408 LMLEDMMEKGI 418



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     ++  Y  +I GLC   K E + +L S M E GL  N V  T L+      G 
Sbjct: 238 MDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGH 297

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL  M  + +     TF VLID LCK   V EA  + G +   G+  N  VYT+
Sbjct: 298 LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I+ A  L  +M     +PD  +Y++LIDG  + +   +A  +   M E G
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YT ++  L R    +  + +F +MI  GI PD +     ++ + E G M++A 
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477

Query: 241 ELQNEMMGRGLL 252
            +  +M+ RG+ 
Sbjct: 478 SMIVQMVDRGVF 489



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 124/245 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++  Y  +I G C E   + +  LL  M+ NGL  N    + L+DA  K  +  EA 
Sbjct: 278 LEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQ 337

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             L  ++   ++V  V +  LIDGLCK+G +  A +   +M   G  P+   Y++LIDGL
Sbjct: 338 LFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGL 397

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C++  + +A  + ++M ++ +      YT +ID  ++    +    + ++M   G++ D+
Sbjct: 398 CRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDI 457

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT  V      G +++A  +  +M+ RG+ P+ +   +L++ +   G + +A      
Sbjct: 458 VTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEV 517

Query: 246 MMGRG 250
           M+G+G
Sbjct: 518 MVGKG 522



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 115/230 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC   K E+++L L  + + G+  N V+ T+L+D   K G+   A  L+ +M+
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMI 379

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                    ++  LIDGLC+   + +A      M + G+  +   YT +ID L ++   E
Sbjct: 380 SEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSE 439

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + +FD+M    + PD   YT  +  Y +    ++A ++  +M + GV  +L  Y +L+
Sbjct: 440 GPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLI 499

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            G +  G + +A   F  M+G+G  P+E     LL+   ++ + D ++++
Sbjct: 500 RGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDI 549



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 123/286 (43%), Gaps = 39/286 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N++     Y T+I   C+      +K  L+ +   GL  ++   T+ +  Y +AG 
Sbjct: 67  MPARNLRT----YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGM 122

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF----- 109
            + A  +   M       T  T+  L+ GL  +G+VREA+  F  M      PD      
Sbjct: 123 LTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYAT 182

Query: 110 ------------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                   G  PN+ VY ALIDG C    +E A  +F+ M    
Sbjct: 183 MVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNR 242

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   YT LI G  K    + A+ L +RM E G++ ++  YT+L+ G    GHLQ A 
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L H M   G++P++     L+    +R  ++EA      ++ +G+
Sbjct: 303 RLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGV 348



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 116/240 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GL       ++  +   M+ +    +T +  T++    +AG   EA  LL+E +
Sbjct: 145 YTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAM 204

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  E  +V +  LIDG C +G +  A+  F  M      PNV  YT LI GLCK   +E
Sbjct: 205 SNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVE 264

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  LF  M +  + P+   YTALI G       + A  L + M   G+  +   ++ L+
Sbjct: 265 RAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLI 324

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L +   ++EA++    ++ +G+  +E++  SL+    + G +D A EL  +M+  G +
Sbjct: 325 DALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFV 384



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 115/241 (47%), Gaps = 14/241 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D   Y ++I GLC + K   + L+L +M E G+ A+ V  T ++D   +   
Sbjct: 378 MISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG 437

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 + D+M+ + I   +VT+ V +   C+ G + +A     +M D G+ PN+  Y  
Sbjct: 438 SEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNT 497

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G      + +A + F+ M  +   P+  +YT L+   +K  S   ++++  ++ ++ 
Sbjct: 498 LIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW-KIADMK 556

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH-YERGNMDEA 239
            DL  + Y  +VW           ++L + ++ +G + +    +S++K+H Y+  N   A
Sbjct: 557 -DLQESNYDEIVW-----------KILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINA 604

Query: 240 I 240
           +
Sbjct: 605 M 605


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 127/256 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +   +G +I G+C   + E +++LL EM+  G+  N VI  T+MD Y K G 
Sbjct: 313 MICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGM 372

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D M     E  V T+ +L  GLCK     EA      M + G+ PNV     
Sbjct: 373 MDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCAT 432

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+  C++  +         + KR ++P+   Y  LID Y K+E  K+A  LK  M E G
Sbjct: 433 FIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKG 492

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  YTSL+ G      + EA  LF+EM+ +GI  +     +++    + G  DEA+
Sbjct: 493 LLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEAL 552

Query: 241 ELQNEMMGRGLLSGSK 256
           +L +EMM  GL+   +
Sbjct: 553 KLYDEMMRMGLIPDDR 568



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   +  Y T++    +    E    +L  M+  G+ A+ V  T L++ Y  +  
Sbjct: 208 MAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSER 267

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + +EM +  +E+ V  +  +I   C++G VR A   F  M   G+ PN   + A
Sbjct: 268 IGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGA 327

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G+CK   +E A  L +EM  + +  +   +  ++DGY K     EA  L++ M   G
Sbjct: 328 LISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKG 387

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+  Y  L  GL +    +EA+ + + M+ +G+ P+ + C + ++ + + GN+ E  
Sbjct: 388 FEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPE 447

Query: 241 ELQNEMMGRGLL 252
                +  RG++
Sbjct: 448 RFLRNIEKRGVV 459



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 121/254 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N++ D+ +Y ++I   C       +  L  EM   G+  NT     L+    KAG+   
Sbjct: 281 RNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEA 340

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+EM    +++ VV F  ++DG CK G++ EA      M   G   +V  Y  L  
Sbjct: 341 AEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILAS 400

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK +  E A+ + + M ++ + P+       I+ Y +  +  E       + + GV  
Sbjct: 401 GLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVP 460

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y +L+   S+   +++A  L  EM+ +G+LPD     SL+        +DEA++L 
Sbjct: 461 NIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLF 520

Query: 244 NEMMGRGLLSGSKN 257
           NEM+ +G+    K 
Sbjct: 521 NEMLVKGIRGNVKT 534



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 101/197 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  +AD+  Y  +  GLC   ++E++K +L+ M E G+  N V C T ++ Y + G 
Sbjct: 383 MERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGN 442

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +E    L  +    +   +VT+  LID   K+  V++A      M + GL P+V  YT+
Sbjct: 443 LAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTS 502

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C  + ++ A  LF+EM  + +  +   YTA+I G  K     EAL L + M  +G
Sbjct: 503 LIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMG 562

Query: 181 VDLDLNAYTSLVWGLSR 197
           +  D   + +LV  L +
Sbjct: 563 LIPDDRVFEALVGSLHK 579



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 7/238 (2%)

Query: 16  IIWGLCIESK-FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +++ +C +++ F D+  +   + E GL      C        K  +    +     M++S
Sbjct: 121 MLFRVCADNRMFRDALKVFDYVMEKGLVVEGRSCFXK-----KCNKVELCVRFFRRMVES 175

Query: 75  -RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
            R+++ V +  +++D LC+ G V  A +    M   G+ P V  Y  L++    +   E 
Sbjct: 176 GRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREG 235

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
              +   M +  ++     YT LI+ Y   E   EA  +   M E  V++D+  YTS++ 
Sbjct: 236 VDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMIS 295

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              R G+++ A  LF EMI RGI+P+     +L+    + G M+ A  L  EM  +G+
Sbjct: 296 WNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGV 353


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 126/250 (50%), Gaps = 3/250 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+ + D   +  ++ GLC  ++ E ++ LL  MKE G   +  I   L+  Y KA +
Sbjct: 33  MIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKD 92

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A   L EM+ +    TVVT+  ++DGLCK+   R+A+     M D G  PN+  Y  
Sbjct: 93  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNV 152

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLC++  ++ A+ + +EM  R   PD   Y + I G  K +   EA     RM    
Sbjct: 153 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 209

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+ +YT+++ GL + G L  A  +   M  RG  PD +   SL+    + G ++ A+
Sbjct: 210 VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAM 269

Query: 241 ELQNEMMGRG 250
            L + M+  G
Sbjct: 270 GLLDSMLKLG 279



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 14/252 (5%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y + I GLC   + ++++  L+ M    +T + V  TT+++   K+G+   A  +L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M +      VVT+  LIDG CK G V  A+     M   G  PN+  Y +L+  L + 
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD------ 182
             I +A ++  EM +R   PD  +Y A IDG  K E  K+A  + +RM E G        
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 183 ----LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL-PDEILCISLLKKHYERGNMD 237
               +D+  YT L+ GL + G   EA  LF +++   I  PD      +L  H +R  +D
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQID 417

Query: 238 EAIELQNEMMGR 249
           +A+++  +M+ +
Sbjct: 418 KALQIHKQMLEK 429



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 90/184 (48%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A ++  EM+D   +    TF +L+ GLC+S  + +A    GRM + G  P+ A+Y ALI
Sbjct: 25  KASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALI 84

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G  K     +A     EM K   +P    YT ++DG  K E  ++A+ L + M + G  
Sbjct: 85  SGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCS 144

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y  +V GL     L EA+ +  EM  RG  PD +   S +K   +   +DEA + 
Sbjct: 145 PNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF 204

Query: 243 QNEM 246
              M
Sbjct: 205 LARM 208



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 47/291 (16%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y T+I GLC     + +  +L  M   G T + V  ++L+D + K GE   A+
Sbjct: 210 VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAM 269

Query: 66  SLLDEML----------------------------DSRIEVT-------VVTFCVLIDGL 90
            LLD ML                            D  +E+        VV++   IDGL
Sbjct: 270 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 329

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVA----------VYTALIDGLCKKNCIERARNLFDE 140
           CK+  V++A   F RM + G  PN +          +YT L+DGLCK    + A  LF +
Sbjct: 330 CKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSK 389

Query: 141 MPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           +    +  PD   Y  ++D + K     +AL +  +M E     ++  +  LV GL    
Sbjct: 390 VLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDD 448

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            L +A  +   M+  G +PD +   +L+    + G    A+EL  E +  G
Sbjct: 449 RLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 499



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 103/231 (44%), Gaps = 12/231 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANT----------VICTT 50
           M+ +    D+  Y   I GLC   + + +K +   M E G T N           ++ T 
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTV 369

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRI-EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           L+D   K G   EA +L  ++LD +I E  V  + V++D  CK   + +A+    +M + 
Sbjct: 370 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEK 429

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
               NV  +  L+ GLC  + +  A  +   M     IPD   Y  L+D   K      A
Sbjct: 430 NC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAA 488

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           L L     + G   D+  Y++L+ GL      +EA +LF +++ R  +PD+
Sbjct: 489 LELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDD 539



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 80/174 (45%)

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
           E  V T+  L+  L +     +A   F  M D    P+   +  L+ GLC+ N +E+AR 
Sbjct: 4   EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARK 63

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           L   M +   +PD   Y ALI GY K + F +A      M +      +  YT++V GL 
Sbjct: 64  LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +    ++A  L  EM  +G  P+      +++   E   +DEA ++  EM  RG
Sbjct: 124 KAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G   NV  Y  L+  L +++  ++A  +F EM  +   PD   +  L+ G  +    ++A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L  RM E+G   D   Y +L+ G S+     +A     EM+    LP  +   +++  
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 230 HYERGNMDEAIELQNEMMGRG 250
             +     +A++L +EM  +G
Sbjct: 122 LCKAERTRDAVKLLDEMRDKG 142


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
           [Arabidopsis lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1164

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +K +   YG+II  LC   K  +++   SEM   G+  +T++ TTL+D + K G+
Sbjct: 730 MKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD 789

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM    I   V+T+  +I G C+ G + EA   F  M   GL P++  +T 
Sbjct: 790 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTE 849

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK   I+ A  + + M +    P+   YT LIDG  K      A  L + M ++G
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y S+V GL + G+++EA  L  E    G+  D +   +L+  + + G MD+A 
Sbjct: 910 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 969

Query: 241 ELQNEMMGRGL 251
           E+  EM+G+GL
Sbjct: 970 EILTEMLGKGL 980



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    D+  Y T+I G C   + +    L+ +MK+ GL  N+    +++    +  +
Sbjct: 695 MELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICK 754

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA     EM+   I    + +  L+DG CK G +R A  +F  M    + P+V  YTA
Sbjct: 755 LAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 814

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   +  A  LF EM  R + PD   +T L++GY K    K+A  + N M + G
Sbjct: 815 IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YT+L+ GL + G L  A  L HEM   G+ P+     S++    + GN++EA+
Sbjct: 875 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934

Query: 241 ELQNEMMGRGL 251
           +L  E    GL
Sbjct: 935 KLVGEFEAAGL 945



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 127/251 (50%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M G+ I  D  +Y T++ G C       +     EM    +T + +  T ++  + + G+
Sbjct: 765  MIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 824

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA  L  EML   +E  ++TF  L++G CK+G +++A      M   G  PNV  YT 
Sbjct: 825  MVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTT 884

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LIDGLCK+  ++ A  L  EM K  + P+   Y ++++G  K  + +EA+ L       G
Sbjct: 885  LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 944

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            ++ D   YT+L+    + G + +A+ +  EM+G+G+ P  +    L+      G +++  
Sbjct: 945  LNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 1004

Query: 241  ELQNEMMGRGL 251
            +L N M+ +G+
Sbjct: 1005 KLLNWMLAKGI 1015



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  ++I  D+  Y  II G C      ++  L  EM   GL  + +  T LM+ Y KAG 
Sbjct: 800  MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGH 859

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              +A  + + M+ +     VVT+  LIDGLCK G +  A +    M   GL PN+  Y +
Sbjct: 860  IKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 919

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +++GLCK   IE A  L  E     +  DT  YT L+D Y K     +A  +   M   G
Sbjct: 920  IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG 979

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +   +  +  L+ G    G L++   L + M+ +GI P+      L+K++  R N+  A 
Sbjct: 980  LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAAT 1039

Query: 241  ELQNEMMGRGL 251
             +  +M  RG+
Sbjct: 1040 AIYKDMCSRGV 1050



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 113/215 (52%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            ++ ++  Y +I+ GLC     E++  L+ E +  GL A+TV  TTLMDAY K+GE  +A 
Sbjct: 910  LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 969

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             +L EML   ++ T+VTF VL++G C  G++ +       M   G+ PN   +  L+   
Sbjct: 970  EILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQY 1029

Query: 126  CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            C +N ++ A  ++ +M  R + PD   Y  L+ G+    + KEA  L   M   G  + +
Sbjct: 1030 CIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSV 1089

Query: 186  NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            + Y+ L+ G  +     EAR +F +M   G+  D+
Sbjct: 1090 STYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADK 1124



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 124/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  +C   +  ++  LL  M+  G T + +  +T+++ Y + GE  +   L+++M 
Sbjct: 672 YNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMK 731

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++    T+  +I  LC+   + EA + F  M   G+ P+  VYT L+DG CK+  I 
Sbjct: 732 QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIR 791

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F EM  RD+ PD   YTA+I G+ +     EA  L + M   G++ D+  +T L+
Sbjct: 792 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELM 851

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + GH+++A  + + MI  G  P+ +   +L+    + G++D A EL +EM   GL
Sbjct: 852 NGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 910



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 121/248 (48%)

Query: 4    KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            + ++ D+  +  ++ G C     +D+  + + M + G + N V  TTL+D   K G+   
Sbjct: 838  RGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 897

Query: 64   ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            A  LL EM    ++  + T+  +++GLCKSG + EA+   G     GL+ +   YT L+D
Sbjct: 898  ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 957

Query: 124  GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
              CK   +++A+ +  EM  + + P    +  L++G+  H   ++   L N M   G+  
Sbjct: 958  AYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1017

Query: 184  DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +   +  LV       +L+ A  ++ +M  RG+ PD     +L+K H    NM EA  L 
Sbjct: 1018 NATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLF 1077

Query: 244  NEMMGRGL 251
             EM G+G 
Sbjct: 1078 QEMKGKGF 1085



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 113/239 (47%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y T+I GLC E   + +  LL EM + GL  N     ++++   K+G   EA+ L+ E  
Sbjct: 882  YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 941

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             + +    VT+  L+D  CKSG + +A +    M   GL P +  +  L++G C    +E
Sbjct: 942  AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1001

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
                L + M  + + P+ T +  L+  Y    + K A  +   M   GV+ D   Y +LV
Sbjct: 1002 DGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLV 1061

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             G     +++EA  LF EM G+G          L+K  ++R    EA E+ ++M   GL
Sbjct: 1062 KGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGL 1120



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 5/206 (2%)

Query: 51  LMDAYFKA----GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS-GLVREAIDYFGR 105
           + D +F+     G   EA  + ++ML+  + ++V +  V +  L K       AI  F  
Sbjct: 600 VFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFRE 659

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            P+ G+  NVA Y  +I  +C+   I  A +L   M  +   PD  +Y+ +I+GY +   
Sbjct: 660 FPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGE 719

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             +   L  +M + G+  +   Y S++  L R   L EA   F EMIG+GILPD I+  +
Sbjct: 720 LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGL 251
           L+    +RG++  A +   EM  R +
Sbjct: 780 LVDGFCKRGDIRAASKFFYEMHSRDI 805



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 109/225 (48%), Gaps = 1/225 (0%)

Query: 28  DSKLLLSEMKENGLTANTVICTTLMDAYFK-AGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           +++ +  +M   GL  +   C   +    K   + + A+ +  E  +  +   V ++ ++
Sbjct: 616 EARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVASYNIV 675

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I  +C+ G + EA      M   G  P+V  Y+ +I+G C+   +++   L ++M ++ +
Sbjct: 676 IHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGL 735

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P++  Y ++I    +     EA    + M   G+  D   YT+LV G  + G ++ A  
Sbjct: 736 KPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASK 795

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            F+EM  R I PD +   +++    + G+M EA +L +EM+ RGL
Sbjct: 796 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGL 840



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 69/162 (42%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M GK ++  +  +  ++ G C+    ED + LL+ M   G+  N      L+  Y     
Sbjct: 975  MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNN 1034

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               A ++  +M    +E    T+  L+ G C +  ++EA   F  M   G   +V+ Y+ 
Sbjct: 1035 LKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSV 1094

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
            LI G  K+     AR +FD+M +  +  D   +    D   K
Sbjct: 1095 LIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYK 1136



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 5/174 (2%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV---AVYTALIDGLCKKNCIERARNLF 138
            F V    L + G++ EA   F +M ++GL  +V    VY A +   C K     A  +F
Sbjct: 600 VFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTAT--AIIVF 657

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
            E P+  +  +  +Y  +I    +     EA +L   M   G   D+ +Y++++ G  R 
Sbjct: 658 REFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRF 717

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G L +   L  +M  +G+ P+     S++        + EA E  +EM+G+G+L
Sbjct: 718 GELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGIL 771



 Score = 41.2 bits (95), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 36/74 (48%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            MKGK     +  Y  +I G     KF +++ +  +M+ +GL A+  I     D  +K   
Sbjct: 1080 MKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKR 1139

Query: 61   PSEALSLLDEMLDS 74
            P   +  +DE++++
Sbjct: 1140 PDTIVDPIDEIIEN 1153


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  134 bits (338), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   NI      + T+I GL    +  +++  L+   + G  + ++   +++D +FK G 
Sbjct: 525 MMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGA 584

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL    EM +S I   V+T+  LIDGLCKS  +  A++    M   G+  +V  Y+A
Sbjct: 585 VDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSA 644

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK + +E A   F E+    + P+T  Y ++I G++   + + ALNL   M +  
Sbjct: 645 LIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNK 704

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  DL  YTS++ GL + G L  A  L+ EM+ + I+PD ++   L+      G ++ A 
Sbjct: 705 VPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENAS 764

Query: 241 ELQNEMMGRGL 251
           ++  EM G  +
Sbjct: 765 KILKEMDGNNI 775



 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 124/240 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G   E   + + L   EM E+G++ + +  T+L+D   K+ +   AL +  +M 
Sbjct: 572 YNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMK 631

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +++ VV +  LIDG CK   +  A  +F  + D GL PN  VY ++I G    N +E
Sbjct: 632 YKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNME 691

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NL  EM K  +  D   YT++I G LK      AL+L + M    +  D+  YT L+
Sbjct: 692 AALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLI 751

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GLS  G L+ A  +  EM G  I P  ++   L+  ++  GN+ EA  L +EM+ +GL+
Sbjct: 752 NGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLV 811



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 121/247 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   L  Y  +I G C +   + +  +L  + E GL  N V  T L+D +FK G+
Sbjct: 455 MVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGD 514

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + ++M+ + I  T  TF  +I+GL K+G V E  D        G       Y +
Sbjct: 515 SERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNS 574

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG  K+  ++ A   + EM +  + PD   YT+LIDG  K      AL + + M   G
Sbjct: 575 IIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKG 634

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD+ AY++L+ G  +   ++ A   F E++  G+ P+ ++  S++       NM+ A+
Sbjct: 635 MKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAAL 694

Query: 241 ELQNEMM 247
            L  EM+
Sbjct: 695 NLHQEMI 701



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 123/250 (49%), Gaps = 1/250 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KG+ ++ D   Y  ++  +C       +  LL EM+E G   +    T ++ A  K G  
Sbjct: 247 KGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNF 306

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EAL L DEM+   + + V+    L+ G C  G V  A+  F  + + G+ P+V +++ L
Sbjct: 307 VEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVL 366

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+G  K   +E+A  L+  M    + P+     +L++G+ +    + A  L +   E G+
Sbjct: 367 INGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI 426

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++  Y  L+  L   G + EA  L+ +M+ +GI P  +   +L+  H ++G MD+A  
Sbjct: 427 T-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYS 485

Query: 242 LQNEMMGRGL 251
           +   ++ RGL
Sbjct: 486 MLKSILERGL 495



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 96/200 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +K D+  Y  +I G C     E +    +E+ + GLT NTV+  +++  +     
Sbjct: 630 MKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNN 689

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL+L  EM+ +++   +  +  +I GL K G +  A+D +  M    + P++ +YT 
Sbjct: 690 MEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTV 749

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GL     +E A  +  EM   ++ P    Y  LI G  +  + +EA  L + M + G
Sbjct: 750 LINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKG 809

Query: 181 VDLDLNAYTSLVWGLSRCGH 200
           +  D   Y  LV G  +  H
Sbjct: 810 LVPDDTTYDILVNGKLKVSH 829



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 34/277 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I     +  F ++  L  EM   GL  N ++  +LM  Y   G+ + AL L DE++
Sbjct: 293 YTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVV 352

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   VV F VLI+G  K G + +A + + RM   G+ PNV +  +L++G  ++N +E
Sbjct: 353 EGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLE 412

Query: 133 RAR----------------------------------NLFDEMPKRDMIPDTTAYTALID 158
            A                                   NL+++M  + + P   +Y  LI 
Sbjct: 413 HAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLIL 472

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           G+ K     +A ++   + E G+  +   YT L+ G  + G  + A V+F +M+   I P
Sbjct: 473 GHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAP 532

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            +    +++    + G + E  +  N  + +G +S S
Sbjct: 533 TDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTS 569



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 122/251 (48%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I+ ++ +  +++ G   ++  E +  L  E  E+G+T N V    L+    + G+
Sbjct: 386 MKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGK 444

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA +L ++M+   I  ++V++  LI G CK G + +A      + + GL PN   YT 
Sbjct: 445 VNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTL 504

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  KK   ERA  +F++M   ++ P    +  +I+G  K     E  +  N   + G
Sbjct: 505 LIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQG 564

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                  Y S++ G  + G +  A + + EM   GI PD I   SL+    +   +  A+
Sbjct: 565 FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLAL 624

Query: 241 ELQNEMMGRGL 251
           E+ ++M  +G+
Sbjct: 625 EMHSDMKYKGM 635



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 113/246 (45%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            ++D  ++  ++      +K  D+      M E+ L     I   L+ A  +     +A 
Sbjct: 146 FESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDAR 205

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L DEM++  I     T  V++    K G   E   +F      GL  + A Y+ L+  +
Sbjct: 206 QLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAV 265

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C++  +  A  L  EM +   +P    YTA+I   +K  +F EAL LK+ M  VG+ +++
Sbjct: 266 CRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNV 325

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
               SL+ G    G +  A  LF E++  G++PD ++   L+    + G+M++A EL   
Sbjct: 326 IVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTR 385

Query: 246 MMGRGL 251
           M   G+
Sbjct: 386 MKLMGI 391



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           +P+   ++  +   +   D++ L  EM E G+  +      +M A  K G+  E      
Sbjct: 185 VPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFK 244

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           E     +EV    + +L+  +C+   +  A +    M +FG  P+   YTA+I    K+ 
Sbjct: 245 EAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQG 304

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
               A  L DEM    +  +     +L+ GY        AL L + + E GV  D+  ++
Sbjct: 305 NFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFS 364

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+ G S+ G +++A  L+  M   GI P+  +  SLL+  +E+  ++ A  L +E +  
Sbjct: 365 VLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEH 424

Query: 250 GL 251
           G+
Sbjct: 425 GI 426


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 135/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K ++ D   Y + I GLC E + E++  L+ +M E GL  N V    L+D Y   G+
Sbjct: 277 MKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGD 336

Query: 61  PSEALSLLDEMLDSRIEVTVVTF-----------------------------------CV 85
             +A +  DEM+   I  ++VT+                                    +
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNI 396

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+G C+ G  + A      M   G+ P +  YT+LI  L K+N ++ A  LF ++ +  
Sbjct: 397 LINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++PD   + ALIDG+  + +   A  L   M  + V  D   Y +L+ G  R G ++EAR
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEAR 516

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L  EM  RGI PD I   +L+  + +RG+M +A  +++EMM  G 
Sbjct: 517 QLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGF 562



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I A L  Y   I  L +E +  D+  ++ EM+E G+  + V    L++ Y + G+
Sbjct: 347 MISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGD 406

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LLDEM+   I+ T+VT+  LI  L K   ++EA   F ++   GL P++ V+ A
Sbjct: 407 AKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNA 466

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    I+RA  L  EM    ++PD   Y  L+ GY +    +EA  L + M   G
Sbjct: 467 LIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRG 526

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D  +Y +L+ G S+ G +++A  +  EM+  G  P  +   +L++   +    + A 
Sbjct: 527 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAE 586

Query: 241 ELQNEMMGRGL 251
           EL  EM+ +G+
Sbjct: 587 ELLKEMVSKGI 597



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 124/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K ++  Y TII G C+  KF+ ++++   MK+ GL  +     + +    K G 
Sbjct: 242 METLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGR 301

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+ +ML+  +    VT+  LIDG C  G + +A  Y   M   G+  ++  Y  
Sbjct: 302 LEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNL 361

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I  L  +  +  A N+  EM ++ M+PD   +  LI+GY +    K A  L + M   G
Sbjct: 362 FIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKG 421

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   L  YTSL++ L +   ++EA  LF ++   G+LPD I+  +L+  H   GN+D A 
Sbjct: 422 IQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAF 481

Query: 241 ELQNEM 246
           +L  EM
Sbjct: 482 QLLKEM 487



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 102/217 (47%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           +KE G   N   C  ++  + K      A  L  EM    I  ++ TF ++I+ LCK G 
Sbjct: 172 IKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGK 231

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           +++A ++ G M   G+ PNV  Y  +I G C +   +RAR +F  M  + + PD   Y +
Sbjct: 232 LKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNS 291

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
            I G  K    +EA  L  +M E G+  +   Y +L+ G    G L +A     EMI +G
Sbjct: 292 FISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKG 351

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           I+   +     +   +  G M +A  +  EM  +G++
Sbjct: 352 IMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 95/202 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I+  L  Y ++I+ L   ++ +++  L S++++ GL  + ++   L+D +   G 
Sbjct: 417 MVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGN 476

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM + ++    +T+  L+ G C+ G V EA      M   G+ P+   Y  
Sbjct: 477 IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K+  ++ A  + DEM      P    Y ALI G  K++  + A  L   M   G
Sbjct: 537 LISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG 596

Query: 181 VDLDLNAYTSLVWGLSRCGHLQ 202
           +  D + Y S++  +     L+
Sbjct: 597 ITPDDSTYLSIIEAMETVDDLE 618



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 102/210 (48%)

Query: 45  TVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG 104
           T+I   L+ AY +  +P+EAL     + +      + T   ++    K    + A   + 
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            M    +  ++  +  +I+ LCK+  +++A+     M    + P+   Y  +I G+    
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
            F+ A  +   M + G++ D   Y S + GL + G L+EA  L  +M+  G++P+ +   
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           +L+  +  +G++D+A   ++EM+ +G+++ 
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMAS 355



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 3/193 (1%)

Query: 66  SLLDEMLDSRIEV---TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           ++ DE+  +R  V   T + F +L+   C+     EA++ F  + + G  PN+     ++
Sbjct: 129 TIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQML 188

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
               K N  + A  L+ EM + ++      +  +I+   K    K+A      M  +GV 
Sbjct: 189 SLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVK 248

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +++ G    G  Q ARV+F  M  +G+ PD     S +    + G ++EA  L
Sbjct: 249 PNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGL 308

Query: 243 QNEMMGRGLLSGS 255
             +M+  GL+  +
Sbjct: 309 ICKMLEGGLVPNA 321


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 127/251 (50%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y  +I GLC   KF ++K +L EMK +G+T +    + L+    KA +
Sbjct: 153 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADK 212

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L  M  S     VV +  +I   CKSG + EA      M      P+V  Y  
Sbjct: 213 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 272

Query: 121 LIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +IDGLCK   I  A+ + D+M +  D++PD   Y+ +I+G  K +   EA  L +RM + 
Sbjct: 273 VIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKA 332

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G + D+  YT+++ GL +CG L+EA  L   M   G  P+ +   +L+    +   +DEA
Sbjct: 333 GCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEA 392

Query: 240 IELQNEMMGRG 250
             +  EM   G
Sbjct: 393 ERVMEEMRNAG 403



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 125/247 (50%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D   Y  +I GLC   K E+++ +L  M  +G T + V+ ++++ A+ K+G+
Sbjct: 188 MKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 247

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYT 119
             EA   L EM   R    VVT+  +IDGLCK G + EA     +M + G + P+V  Y+
Sbjct: 248 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYS 307

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I+GLCK + +  A+ L D M K    PD   YT +IDG  K    +EA  L   M   
Sbjct: 308 TVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRA 367

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   ++  YT+L+ GL +   + EA  +  EM   G  P+ +   +++      G + EA
Sbjct: 368 GCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEA 427

Query: 240 IELQNEM 246
            +L   M
Sbjct: 428 QQLVQRM 434



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 112/214 (52%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           +  ++  G   N V  T L+ A+ +A +  EA+ LL+EM +      +VT+ VL+D LCK
Sbjct: 45  MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 104

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
             +V  A D   +M + G  PNV  + +L+DG CK+  ++ AR L   M  + M P+   
Sbjct: 105 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 164

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y+ALIDG  K + F EA  +   M   GV  D   Y++L+ GL +   ++EA  +   M 
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 224

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           G G  PD ++  S++    + G + EA +   EM
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 258



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 115/238 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I       K E++  LL EM+E G   N V    L+DA  K      A  ++ +M+
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      V+TF  L+DG CK G V +A    G M   G+ PNV  Y+ALIDGLCK     
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ + +EM    + PD   Y+ALI G  K +  +EA  +  RM   G   D+  Y+S++
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               + G L EA+    EM  +   PD +   +++    + G + EA  + ++M   G
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    +L  Y  ++  LC  S    ++ ++ +M E G   N +   +L+D + K G 
Sbjct: 83  MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGN 142

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL  M+   +   VVT+  LIDGLCKS    EA +    M   G+ P+   Y+A
Sbjct: 143 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSA 202

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK + IE A  +   M      PD   Y+++I  + K     EA      M +  
Sbjct: 203 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 262

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG-ILPDEILCISLLKKHYERGNMDEA 239
              D+  Y +++ GL + G + EA+V+  +M   G +LPD +   +++    +   + EA
Sbjct: 263 KSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEA 322

Query: 240 IELQNEMMGRG 250
            +L + M   G
Sbjct: 323 QKLLDRMCKAG 333



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 3/214 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M+ +    D+  Y T+I GLC   K  +++++L +M+E+G +  + V  +T+++   K+ 
Sbjct: 258 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSD 317

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA  LLD M  +     VVT+  +IDGLCK G + EA      M   G  PNV  YT
Sbjct: 318 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 377

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LI GLCK   ++ A  + +EM      P+   Y  +++G       KEA  L  RM + 
Sbjct: 378 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDG 437

Query: 180 GVDL--DLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             +   D   Y ++V  L     +QEA  L  +M
Sbjct: 438 RAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 3/194 (1%)

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
           AG+   AL LL+EM  +       T   +I  +  +G +  A+D+   M   G  PNV  
Sbjct: 3   AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVT 59

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           YTALI    +   +E A  L +EM +R   P+   Y  L+D   K      A ++  +M 
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E G   ++  + SLV G  + G++ +AR L   M+ +G+ P+ +   +L+    +     
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 238 EAIELQNEMMGRGL 251
           EA E+  EM   G+
Sbjct: 180 EAKEVLEEMKASGV 193



 Score = 43.9 bits (102), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 32/158 (20%)

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTA--------------------------------Y 153
           C    +  A  L +EM      PD                                   Y
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTY 60

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           TALI  + + +  +EA+ L   M E G   +L  Y  LV  L +   +  A+ +  +MI 
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  P+ +   SL+    +RGN+D+A +L   M+ +G+
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGM 158


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 127/245 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + AD+ +Y TII  LC      D+  L SEM   G+  N    + L+DA  K  +  +A+
Sbjct: 143 VNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAM 202

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +LL  M+   ++  VVT+  ++DG C    V +A++ F  M   G+ PNV  Y  +I+GL
Sbjct: 203 NLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGL 262

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CKK  ++ A NLF EM  + + PD   Y  LIDG  K      +L L + M  +G  +D+
Sbjct: 263 CKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDI 322

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL+  L +  HL +A  L  E+  +GI P+     +L+    + G +++A  +  E
Sbjct: 323 ITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQE 382

Query: 246 MMGRG 250
           ++  G
Sbjct: 383 ILTEG 387



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 125/245 (51%), Gaps = 3/245 (1%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D   Y  ++ GLC   K  +++  +  +++  + A+ V+ +T++D+  K    ++A  
Sbjct: 112 KLDQVSYAILMNGLC---KMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYR 168

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM+   I   V TF +L+D LCK    ++A++    M   G+ PNV  Y A++DG C
Sbjct: 169 LYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYC 228

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
             N + +A N+F+ M +  + P+   Y  +I+G  K +   EA+NL   M    ++ D+ 
Sbjct: 229 LVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVV 288

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y  L+ GL + G +  +  L  EM   G   D I   SLL    +  ++D+AI L  E+
Sbjct: 289 TYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEI 348

Query: 247 MGRGL 251
             +G+
Sbjct: 349 KDQGI 353



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 8/250 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  +  ++  LC + K + +  LL+ M + G+  N V    +MD Y    +
Sbjct: 173 MIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQ 232

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++AL++ + M+   +E  V  + ++I+GLCK   V EA++ F  M    ++P+V  Y  
Sbjct: 233 VNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNI 292

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I  +  L DEM       D   Y +L+    K+    +A+ L   + + G
Sbjct: 293 LIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQG 352

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG----ILPDEILCISLLKKHYERGNM 236
           +  ++  YT+L+ GL + G L++A V+F E++  G    +    ++   L KK    G  
Sbjct: 353 IQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKK----GLF 408

Query: 237 DEAIELQNEM 246
           DEA+ L + M
Sbjct: 409 DEALALLSRM 418



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 119/238 (50%), Gaps = 3/238 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G+C+  +  ++ L    +  +G   + V    LM+   K GE   A+ +L +  
Sbjct: 83  FTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRK-- 140

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + +   VV +  +ID LCK   V +A   +  M   G+ PNV  ++ L+D LCK    +
Sbjct: 141 -TWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGK 199

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A NL   M K+ + P+   Y A++DGY       +ALN+ N M + GV+ ++  Y  ++
Sbjct: 200 QAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIII 259

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL +   + EA  LF EM  + I PD +    L+    + G +  ++EL +EM   G
Sbjct: 260 NGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIG 317



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K ++  YG I+ G C+ ++   +  + + M + G+  N      +++   K   
Sbjct: 208 MMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKR 267

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L  EM   +I   VVT+ +LIDGLCK G +  +++    M   G   ++  Y +
Sbjct: 268 VDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNS 327

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+  LCK + +++A  L  E+  + + P+   YT LIDG  K    ++A  +   +   G
Sbjct: 328 LLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEG 387

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             + +  Y  ++ GL + G   EA  L   M     +PD +   +++    E+G   +  
Sbjct: 388 YHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTN 447

Query: 241 ELQNEMMGRGL 251
           +L   M+ RGL
Sbjct: 448 KLLCAMIVRGL 458



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 112/248 (45%), Gaps = 34/248 (13%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +++ NG+  + V  T LM+ Y   G  +   S+L ++L    E   +TF  LI G+C
Sbjct: 32  LFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMC 91

Query: 92  KSGLVREAIDYFGRMPDFG--------------------------------LHPNVAVYT 119
            +G   EA+ +   +   G                                ++ +V +Y+
Sbjct: 92  LNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNADVVMYS 151

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +ID LCK   +  A  L+ EM  + + P+   ++ L+D   K    K+A+NL   M + 
Sbjct: 152 TIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKK 211

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY-ERGNMDE 238
           GV  ++  Y +++ G      + +A  +F+ M+  G+ P+ + C +++     ++  +DE
Sbjct: 212 GVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPN-VWCYNIIINGLCKKKRVDE 270

Query: 239 AIELQNEM 246
           A+ L  EM
Sbjct: 271 AMNLFKEM 278



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 11/205 (5%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++ +  K      A+SL  ++  + I+ ++VT  +L++  C +G +        ++   G
Sbjct: 16  ILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMG 75

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PN   +T LI G+C       A    D +       D  +Y  L++G  K    + A+
Sbjct: 76  YEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAM 135

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISL 226
            +   + +  V+ D+  Y++++  L +   + +A  L+ EMI +GI P+     IL  +L
Sbjct: 136 QM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDAL 192

Query: 227 LKKHYERGNMDEAIELQNEMMGRGL 251
            K    +    +A+ L   MM +G+
Sbjct: 193 CKDRKGK----QAMNLLAMMMKKGV 213


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 128/237 (54%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GLC E + ++++ LL E     L  N    T+L+  +   GE   A +LL EM+
Sbjct: 402 FSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMM 461

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      VVTF  LI GL  +G V EA+    +M    L P+  +Y  LI GLCKK  + 
Sbjct: 462 ERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLP 521

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            ARNL +EM ++++ PD   YT LIDG++++ES  EA  +   M + G+  D+  Y +++
Sbjct: 522 AARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMI 581

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            G  + G + EA      M   G +PDE    +L+  + ++GN+  A+ L  +MM R
Sbjct: 582 KGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKR 638



 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +   +  YGT++  L  +   E    LLSEM+E  L  N  I  +++DA  K   
Sbjct: 320 MEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRS 379

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+AL +L +M     +   +TF  LI GLC+ G V+EA         + L+PN++ YT+
Sbjct: 380 ASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTS 439

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C +  +  A NL  EM +R   PD   + ALI G +      EAL ++ +M    
Sbjct: 440 LIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQ 499

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D N Y  L+ GL +   L  AR L  EM+ + + PD+ +  +L+       ++DEA 
Sbjct: 500 LLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEAR 559

Query: 241 ELQNEMMGRGL 251
           ++   M  +G+
Sbjct: 560 KIFEFMEQKGI 570



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  +L  Y ++I G C+  +   +  LL EM E G T + V    L+     AG+ SEAL
Sbjct: 430 LNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEAL 489

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + ++M   ++      + VLI GLCK  ++  A +    M +  +HP+  VYT LIDG 
Sbjct: 490 LVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGF 549

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            +   ++ AR +F+ M ++ + PD   Y A+I GY +     EA+   + M +VG   D 
Sbjct: 550 IRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDE 609

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+ G ++ G++  A  L  +M+ R   P+ +   SL+  + + G+ D A  L   
Sbjct: 610 FTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGS 669

Query: 246 MMGRGLL 252
           M  +GL 
Sbjct: 670 MESQGLF 676



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 111/236 (47%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            Y  +I G C         LLL EM+  GL    V   TLM    + G+  +  SLL EM
Sbjct: 296 FYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEM 355

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            + R+   V  +  +ID LCK     +A+    +M   G  P+   ++ LI GLC++  +
Sbjct: 356 RERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRV 415

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A  L  E  + ++ P+ ++YT+LI G+        A NL   M E G   D+  + +L
Sbjct: 416 QEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGAL 475

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + GL   G + EA ++  +M  R +LPD  +   L+    ++  +  A  L  EM+
Sbjct: 476 IHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEML 531



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 110/238 (46%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            ++ GLC+E   E    L+      G   N V    L+D Y + G+    + LL EM   
Sbjct: 264 VMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAK 323

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +  TVVT+  L+  L + G + +       M +  L PNV +Y ++ID LCK     +A
Sbjct: 324 GLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQA 383

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             +  +M      PD   ++ LI G  +    +EA  L    T   ++ +L++YTSL+ G
Sbjct: 384 LVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHG 443

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               G +  A  L  EM+ RG  PD +   +L+      G + EA+ ++ +M  R LL
Sbjct: 444 FCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLL 501



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 104/225 (46%), Gaps = 4/225 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +G +I GL +  +  ++ L+  +M    L  +  I   L+    K      A +L+
Sbjct: 468 DVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLI 527

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EML+  +      +  LIDG  ++  + EA   F  M   G+HP+V  Y A+I G C+ 
Sbjct: 528 EEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQF 587

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A      M K   IPD   YT LI GY K  +   AL+L   M +     ++ AY
Sbjct: 588 GMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAY 647

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKK 229
           +SL+ G  + G    A  LF  M  +G+ P+     IL  SL KK
Sbjct: 648 SSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKK 692



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 106/227 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D  +Y  +I GLC +     ++ L+ EM E  +  +  + TTL+D + +   
Sbjct: 495 MAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNES 554

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + + M    I   VV +  +I G C+ G++ EA++    M   G  P+   YT 
Sbjct: 555 LDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTT 614

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K+  I  A +L  +M KR   P+  AY++LI+GY K      A  L   M   G
Sbjct: 615 LIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQG 674

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +  ++  YT L+  L +   +  A + F  M+     P++    SL+
Sbjct: 675 LFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLV 721



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 106/271 (39%), Gaps = 59/271 (21%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  D+  Y  +I G C      ++   +S M++ G   +    TTL+  Y K G 
Sbjct: 565 MEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S ALSLL +M+  R +  VV +  LI+G CK G    A   FG M   GL PNV  YT 
Sbjct: 625 ISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTI 684

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
           LI  L KK+ + RA   F+ M      P+                               
Sbjct: 685 LIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHG 744

Query: 150 -------------------TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
                               +AY A+I     H    EAL+LKN+M   G   D   + S
Sbjct: 745 KGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLS 804

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           L++G    G  +E R          ILP+E 
Sbjct: 805 LLYGFCSVGKSREWRT---------ILPNEF 826



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 102/225 (45%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           ++D++ L  EM      A+      ++      G   + L L++    +      V + V
Sbjct: 240 WDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNV 299

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LIDG C+ G V   I   G M   GL P V  Y  L+  L +K  +E+  +L  EM +R 
Sbjct: 300 LIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERR 359

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+   Y ++ID   K  S  +AL +  +M   G D D   +++L+ GL + G +QEA 
Sbjct: 360 LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAE 419

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            L  E     + P+     SL+     RG +  A  L  EMM RG
Sbjct: 420 RLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERG 464



 Score = 40.4 bits (93), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 40/211 (18%), Positives = 72/211 (34%), Gaps = 50/211 (23%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + ++  Y ++I G C     + ++ L   M+  GL  N +  T L+ + FK  +
Sbjct: 635 MMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDK 694

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS--------------------------- 93
              A    + ML ++      T   L+ GLC S                           
Sbjct: 695 VVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRA 754

Query: 94  -----------------------GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
                                   ++ EA+D   +M + G  P+ A + +L+ G C    
Sbjct: 755 LVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGK 814

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
               R +     +RD +   + Y  L D Y+
Sbjct: 815 SREWRTILPNEFQRDELEVASRYKILFDQYV 845


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 126/254 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K     +  YG II G C +  F+    LL EM   GLT N  +  T++DA +K G 
Sbjct: 246 LKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+  ++ M++   +  +VT+  LI G C+ G V EA     +    GL PN   YT 
Sbjct: 306 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTP 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   CK+   +RA N   EM +R   PD   Y AL+ G +       AL ++ +M E G
Sbjct: 366 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 425

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y  L+ GL +   L  A++L  EM+ + +LPD  +  +L+      GN+DEA 
Sbjct: 426 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 485

Query: 241 ELQNEMMGRGLLSG 254
           +L    + +G+  G
Sbjct: 486 KLFELTIEKGMNPG 499



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 124/241 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D+  Y T+I G C + K  ++  LL +    GL  N    T L+ AY K G    A +
Sbjct: 322 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 381

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
            L EM +   +  +VT+  L+ GL  +G V  A+    +M + G+ P+  +Y  L+ GLC
Sbjct: 382 WLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLC 441

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           KK  +  A+ L  EM  + ++PD   Y  L+DG++++ +  EA  L     E G++  + 
Sbjct: 442 KKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIV 501

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +++ G  + G +++A    + M  R + PDE    +++  + ++ ++D A ++  EM
Sbjct: 502 GYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREM 561

Query: 247 M 247
           +
Sbjct: 562 V 562



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 113/250 (45%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+    ++  Y T+I G C +   E +  L  E+K  G          +++ + K G+  
Sbjct: 213 GQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFK 272

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
               LL EM    + V V  +  +ID   K G + +A++    M + G  P++  Y  LI
Sbjct: 273 AIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLI 332

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C+   +  A  L ++   + ++P+  +YT LI  Y K   +  A N    MTE G  
Sbjct: 333 SGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHK 392

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            DL  Y +LV GL   G +  A  +  +M+ RG+ PD  +   L+    ++  +  A  L
Sbjct: 393 PDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLL 452

Query: 243 QNEMMGRGLL 252
             EM+ + +L
Sbjct: 453 LAEMLDQSVL 462



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 21/261 (8%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +++  L     F + +++L  M+   ++      + ++ AY  +G   +AL L   +L
Sbjct: 97  YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156

Query: 73  DS---------------------RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGL 111
            +                     RIE+     C+++ GLCK G + E           G 
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRWGQGC 216

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
            PN+  Y  LIDG CKK  +E A  LF E+  +  +P    Y A+I+G+ K   FK    
Sbjct: 217 IPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDR 276

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
           L   M   G+ +++  Y +++    + GH+ +A      MI  G  PD +   +L+    
Sbjct: 277 LLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSC 336

Query: 232 ERGNMDEAIELQNEMMGRGLL 252
             G + EA +L  + +G+GL+
Sbjct: 337 RDGKVSEADQLLEQALGKGLM 357



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 101/217 (46%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK +  +   Y  +I   C +  ++ +   L EM E G   + V    L+     AGE  
Sbjct: 353 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 412

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            AL++ ++ML+  +      + +L+ GLCK   +  A      M D  + P+  VY  L+
Sbjct: 413 VALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLV 472

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG  +   ++ AR LF+   ++ M P    Y A+I GY K    K+A+   NRM +  + 
Sbjct: 473 DGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLA 532

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            D   Y++++ G  +   L  A+ +F EM+     P+
Sbjct: 533 PDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN 569



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 84/179 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K DL  YG ++ GL +  + + +  +  +M E G+  +  I   LM    K  +
Sbjct: 386 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFK 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EMLD  +      +  L+DG  ++G + EA   F    + G++P +  Y A
Sbjct: 446 LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNA 505

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +I G CK   ++ A    + M KR + PD   Y+ +IDGY+K      A  +   M ++
Sbjct: 506 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKM 564



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 78/147 (53%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  D  +Y  ++ GLC + K   +KLLL+EM +  +  +  +  TL+D + + G   E
Sbjct: 424 RGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDE 483

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L +  ++  +   +V +  +I G CK G++++A+    RM    L P+   Y+ +ID
Sbjct: 484 ARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVID 543

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDT 150
           G  K++ ++ A+ +F EM K    P+ 
Sbjct: 544 GYVKQHDLDGAQKMFREMVKMKCKPNV 570



 Score = 36.6 bits (83), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 21/160 (13%)

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL--- 170
           N   Y++L+  L +         + + M   +M P   A + +I  Y      ++AL   
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 171 -----------------NLKNRMTEVG-VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
                            +L N + ++G +++       +V GL + G L+E R L  +  
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRW 212

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G+G +P+ I   +L+  + ++G+M+ A  L  E+  +G L
Sbjct: 213 GQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFL 252


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 128/247 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I   L  Y  +I G C +   +D+  +++ + E+GL  N +  T LM+  FK G+
Sbjct: 457 MIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGD 516

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++ D+M+ + I  T  TF  +I+GLCK G V EA D           P    Y  
Sbjct: 517 CEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNC 576

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG  K+  I+ A +++ EM + ++ P+   YT+LI+G+ K      AL + + M   G
Sbjct: 577 IIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKG 636

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++LD+  Y +L+ G  +   ++ A   F +++  G+ P+ I+   ++  +    NM+ A+
Sbjct: 637 LELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAAL 696

Query: 241 ELQNEMM 247
            L  EM+
Sbjct: 697 NLHKEMI 703



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 122/240 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II G   E   + ++ +  EM  + ++ N +  T+L++ + K+ +   AL + D+M 
Sbjct: 574 YNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMK 633

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +E+ +  +  LI G CK   +  A  +F ++ + GL PN  VY  +I      N +E
Sbjct: 634 RKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNME 693

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NL  EM    +  D   YT+LIDG LK      AL+L + M   G+  D+  Y  L+
Sbjct: 694 AALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLI 753

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL   G L+ A  +  EM G  I P  +L  +L+  H++ GN+ EA  L +EM+ +GL+
Sbjct: 754 NGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLV 813



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 101/194 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K ++ D+ +Y T+I G C     E++    S++ E GLT NT++   ++ AY     
Sbjct: 632 MKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNN 691

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL+L  EM++++I   +  +  LIDGL K G +  A+D +  M   G+ P++ +Y  
Sbjct: 692 MEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNV 751

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC    +E A  +  EM   ++ P    Y  LI G+ K  + +EA  L + M + G
Sbjct: 752 LINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKG 811

Query: 181 VDLDLNAYTSLVWG 194
           +  D   Y  LV G
Sbjct: 812 LVPDDTTYDILVNG 825



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 120/249 (48%), Gaps = 1/249 (0%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+ +K D   Y  +I  +C  S  + +  L+   +E G   +      ++ A  + G   
Sbjct: 250 GRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFG 309

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL L DEM+DSR+ V V     LI G C  G V  A+  F  + + G+ PNVA+++ LI
Sbjct: 310 EALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLI 369

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +   K   +E+A  L+  M    + P       L+ G+ K    + A  L +   E G+ 
Sbjct: 370 EWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA 429

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             +     L+W L   G + EA  L+ +MIG+GI P  +    ++  H ++G MD+A E+
Sbjct: 430 SVVTYNIVLLW-LCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEV 488

Query: 243 QNEMMGRGL 251
            N ++  GL
Sbjct: 489 MNGIIESGL 497



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 36/278 (12%)

Query: 13  YGTIIWGLCIE-SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y  +I G C+    F ++  L  EM ++ +  N  + T+L+  Y   G+ + AL L DE+
Sbjct: 295 YAAVI-GACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEV 353

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           ++  +   V  F VLI+   K G V +A + + RM   GL P V +   L+ G  K+N +
Sbjct: 354 VEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLL 413

Query: 132 ERAR----------------------------------NLFDEMPKRDMIPDTTAYTALI 157
           E A                                   NL+D+M  + + P   +Y  +I
Sbjct: 414 ENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMI 473

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G+ K     +A  + N + E G+  +   YT L+ G  + G  + A  +F +M+  GI+
Sbjct: 474 LGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIV 533

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           P +    S++    + G + EA +  N  + +  +  S
Sbjct: 534 PTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTS 571



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 103/216 (47%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E+G+         L+ A  +     +A  L DEM + RI     T  VL+    K G 
Sbjct: 178 MLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGK 237

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
             EA  YFG+    GL  + A Y+ +I  +C+ + ++ A  L +   +   +P    Y A
Sbjct: 238 FVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAA 297

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +I   ++  +F EAL LK+ M +  V +++   TSL+ G    G +  A  LF E++  G
Sbjct: 298 VIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVG 357

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + P+  +   L++   + GN+++A EL   M   GL
Sbjct: 358 VTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGL 393



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 98/229 (42%), Gaps = 1/229 (0%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           +P    ++  +   +  ED+  L  EM E  +  +      LM A  K G+  EA     
Sbjct: 187 VPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFG 246

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           +     +++   ++ ++I  +C+   +  A        + G  P+   Y A+I    +  
Sbjct: 247 QAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLG 306

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
               A  L DEM    +  +    T+LI GY        AL L + + EVGV  ++  ++
Sbjct: 307 NFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFS 366

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            L+   S+ G++++A  L+  M   G+ P  +  ++ L K + + N+ E
Sbjct: 367 VLIEWCSKIGNVEKANELYTRMKCMGLQP-TVFILNFLLKGFRKQNLLE 414



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 6/175 (3%)

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           DSR+      F  L+    ++  + EA++ F  M + G+ P V     L+  + ++N +E
Sbjct: 151 DSRV------FNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVE 204

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM +R +  D      L+   LK   F EA     +    G+ LD  +Y+ ++
Sbjct: 205 DAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVI 264

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             + R   L  A  L       G +P E    +++      GN  EA+ L++EM+
Sbjct: 265 QAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMV 319


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  134 bits (337), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 144/313 (46%), Gaps = 61/313 (19%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  +L  YG +I G C E    ++  L  EM  NG+  N  IC+ LM  ++K G+
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654

Query: 61  PSEALSLLDEMLD---------SRIEVTVVT-----------------FCVLIDGLCKSG 94
             EA  +L ++++         S IE+  ++                 + V+I GLCKSG
Sbjct: 655 VDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSG 714

Query: 95  LVREAIDYFGRM------PD-----------------------------FGLHPNVAVYT 119
            + +A   F  +      PD                              GL PN+  Y 
Sbjct: 715 RIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYN 774

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LI GLCK   + RA NLF+++  + + P+   Y  LID Y K     EA  LK +M E 
Sbjct: 775 SLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEE 834

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+   +  Y+ L++GL   G+++EA  L  +MI   + P+ I   +L+  + + GNM+E 
Sbjct: 835 GIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEI 894

Query: 240 IELQNEMMGRGLL 252
            +L +EM  RGLL
Sbjct: 895 SKLYDEMHIRGLL 907



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 130/252 (51%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G  ++ +L  Y  ++   C     ED++ +L  ++  GL+ N V  T L+  Y K G 
Sbjct: 244 MEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGR 303

Query: 61  PSEALSLLDEMLDS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             EA  ++ EM ++  I V  V + ++I+G C+ G + +A      M D G+H N+ VY 
Sbjct: 304 MEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYN 363

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I+GLCK   +E  + +  EM    M PD  +Y  LIDGY +  S ++A  +   M   
Sbjct: 364 TMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+      Y +L+ G      + +A  L+  M+ RG+ P+EI C +LL   ++ G  ++A
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483

Query: 240 IELQNEMMGRGL 251
           + L  E + RGL
Sbjct: 484 LNLWKETLARGL 495



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 119/227 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G C     +D+  L   M + G+  N + C+TL+D  FKAG+  +AL+L  E L
Sbjct: 432 YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL 491

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   V+TF  +I+GLCK G + EA +   RM +    P+   Y  L DG CK   + 
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L ++M      P    + + I G+   + + +  ++ + M+  G+  +L  Y +L+
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            G  + G+L EA  L+ EM+  G+ P+  +C +L+   Y+ G +DEA
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA 658



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 105/207 (50%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++  II+GLC   +  D+K L   ++      +    ++L+     +G   EA SL D M
Sbjct: 702 MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVM 761

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L + +   ++T+  LI GLCKSG +  A++ F ++   G+ PN   Y  LID  CK+   
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKT 821

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  L  +M +  + P    Y+ LI G       +EA+ L ++M E  VD +   Y +L
Sbjct: 822 TEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTL 881

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILP 218
           + G  + G+++E   L+ EM  RG+LP
Sbjct: 882 IHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 114/224 (50%), Gaps = 1/224 (0%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           + ++  +M+  G+  +      +  AY + G  ++A+  ++EM    +EV +V +  ++D
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR-DMI 147
             C  G   +A      +   GL PNV  YT L+ G CK   +E A  +  EM +  D++
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
            D  AY  +I+GY +     +A  ++N M + G+ ++L  Y +++ GL + G ++E + +
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             EM   G+ PD+    +L+  +   G+M +A E+   M+  GL
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGL 425



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           ++ K +  ++  Y  ++ G C + + E+++ ++ EMKE G +  + V    +++ Y + G
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG 338

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              +A  + +EM D+ I V +  +  +I+GLCK G + E       M D G+ P+   Y 
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LIDG C++  + +A  +   M +  +   T  Y  L+ G+    +  +AL L   M + 
Sbjct: 399 TLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR 458

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV  +  + ++L+ GL + G  ++A  L+ E + RG+  + I   +++    + G M EA
Sbjct: 459 GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518

Query: 240 IELQNEM 246
            EL + M
Sbjct: 519 EELLDRM 525



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 112/251 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D   Y T+I G C E     +  +   M  NGL A T+   TL+  +     
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L   ML   +    ++   L+DGL K+G   +A++ +      GL  NV  +  
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK   +  A  L D M +    PD+  Y  L DGY K      A +L N+M  +G
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  + S + G        +   +  EM  RG+ P+ +   +L+    + GN+ EA 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 241 ELQNEMMGRGL 251
            L  EM+  G+
Sbjct: 625 NLYFEMVNNGM 635



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 114/242 (47%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +I  D   YG +I G C   + +D+  + +EM++ G+  N  +  T+++   K G   E 
Sbjct: 319 DIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             +L EM D  +     ++  LIDG C+ G +R+A +    M   GL      Y  L+ G
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKG 438

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            C  + I+ A  L+  M KR + P+  + + L+DG  K    ++ALNL       G+  +
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  + +++ GL + G + EA  L   M      PD +   +L   + + G +  A  L N
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 245 EM 246
           +M
Sbjct: 559 KM 560



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 80/148 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y ++I+GLC   K   +  L ++++  G++ N +   TL+D Y K G+
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L  +M++  I+ TV+T+ +LI GLC  G + EAI    +M +  + PN   Y  
Sbjct: 821 TTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIP 148
           LI G  K   +E    L+DEM  R ++P
Sbjct: 881 LIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 56/290 (19%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            + +  ++  + T+I GLC   +  +++ LL  MKE     +++   TL D Y K G+  
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551

Query: 63  EALSLLD-----------EMLDSRI------------------------EVTVVTFCVLI 87
            A  L++           EM +S I                           +VT+  LI
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611

Query: 88  DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
            G CK G + EA + +  M + G++PNV + +AL+    K+  ++ A  +  ++   DMI
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMI 671

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS------LVWGLSRCGHL 201
           P  +  T  ID  + H               V    D N +++      +++GL + G +
Sbjct: 672 PGCSISTIEIDK-ISH--------------VVDTIADGNPHSANVMWNVIIFGLCKSGRI 716

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +A+ LF  +  +  LPD     SL+      G++DEA  L++ M+  GL
Sbjct: 717 ADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 79/172 (45%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           + V+F +L+     +G +  A++ F  M   G  P++     L++ L +      A  ++
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
            +M    ++PD      +   Y +     +A+     M  +G++++L AY +++      
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G  ++AR +   +  +G+ P+ +    L+K + + G M+EA  +  EM   G
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 26/187 (13%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLH--------PNVAVYTALIDGLCKKNCIERARNL 137
           L   L ++ L R  +D     PD  LH        P++  +  L+  L +      AR L
Sbjct: 68  LTPALLQAALRRVRLD-----PDAALHLFRLAPSRPSLVSHAQLLHILARARRFHDARAL 122

Query: 138 FDEMPK-------------RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
              +P              RD      ++  L+  +        ALN+ + M +VG    
Sbjct: 123 LSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPS 182

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           L +   L+  L + G    A +++ +M   G+LPDE     + K +   G + +A+E   
Sbjct: 183 LRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVE 242

Query: 245 EMMGRGL 251
           EM G GL
Sbjct: 243 EMEGMGL 249


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 116/222 (52%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           KF +++LL  EM E GL AN +  + L+D++ + GE   A+  LD+M  + IE TV  + 
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            LI+G CK G    A  YF  M D GL P V  YT+LI G C +    +A  +++EM  +
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + P+T  +TA+I G  +     EA+ L   M E  +      Y  ++ G  R G++ EA
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             L  EM+G+G +PD      L+      G + EA E  +++
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDL 428



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 126/252 (50%), Gaps = 9/252 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    K  + +Y  +I GLC   +  ++  + + + + GL AN V        Y+  G+
Sbjct: 157 MEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVV-------TYY--GK 207

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L  EM +  +    +T+ +LID  C+ G +  AI +  +M    +   V  Y +
Sbjct: 208 FNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNS 267

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK      A+  FDEM  + + P    YT+LI GY     + +A  + N MT  G
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   +T+++ GL R   + EA  LF EM  R I+P E+    +++ H   GN+ EA 
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAF 387

Query: 241 ELQNEMMGRGLL 252
            L +EM+G+G +
Sbjct: 388 HLLDEMVGKGFV 399



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 126/252 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +   +  Y ++I G C E ++  +  + +EM   G++ NT   T ++    +A  
Sbjct: 288 MIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANM 347

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA+ L  EM + +I  + VT+ V+I+G C+SG + EA      M   G  P+   Y  
Sbjct: 348 MAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRP 407

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    +  A+   D++ K     +   Y+AL+ GY K   FK+A++    M E G
Sbjct: 408 LISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERG 467

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V +DL  Y  L+ G +R    +    L  EM   G+ PD ++  +++ +H + GN+ EA 
Sbjct: 468 VAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAF 527

Query: 241 ELQNEMMGRGLL 252
            L + M+  G L
Sbjct: 528 GLWDIMVDEGCL 539



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 127/253 (50%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL  Y  +I G   E        LL EM  +GL  + VI T ++D + KAG 
Sbjct: 463 MVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGN 522

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D M+D      VVT+  LI+GLCK+GL+ +A           + PN   Y  
Sbjct: 523 LKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGC 582

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +D L +   +E+A  L   M K   +  T +Y  LI G+ +    +EA  L + MT+  
Sbjct: 583 FLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDND 641

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y+++++   +  +LQEA  L+H M+ +G+ PD +    L+      G +++A 
Sbjct: 642 ILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAF 701

Query: 241 ELQNEMMGRGLLS 253
           EL++EM+ RG+ S
Sbjct: 702 ELRDEMIRRGMRS 714



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 36/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  +   +  II GLC  +   ++  L  EMKE  +  + V    +++ + ++G 
Sbjct: 323 MTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGN 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF----------------- 103
            SEA  LLDEM+         T+  LI GLC  G V EA ++                  
Sbjct: 383 ISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSA 442

Query: 104 --------GRMPDF----------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                   GR  D           G+  ++  Y  LIDG  +++       L  EM    
Sbjct: 443 LVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG 502

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   YT +ID + K  + KEA  L + M + G   ++  YT+L+ GL + G + +A 
Sbjct: 503 LRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAE 562

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           +L  E +   + P+ I     L      GNM++A++L + M+ +G L+ +
Sbjct: 563 LLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-KGFLATT 611



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 97/250 (38%), Gaps = 63/250 (25%)

Query: 65  LSLLDE--MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           LSL D   M D  +   V T   L++GL +     + +  F  +    + P++ +Y+A++
Sbjct: 79  LSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVV 138

Query: 123 -----------------------------------DGLCK----------KNCI------ 131
                                               GLCK          KNC+      
Sbjct: 139 RSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLE 198

Query: 132 ----------ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
                       A  LF EM ++ +  +   Y+ LID + +      A+   ++MT+  +
Sbjct: 199 ANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASI 258

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           +  +  Y SL+ G  + G+   A+  F EMI +G+ P  +   SL+  +   G   +A +
Sbjct: 259 EFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFK 318

Query: 242 LQNEMMGRGL 251
           + NEM  +G+
Sbjct: 319 VYNEMTAKGI 328


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 126/254 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K     +  YG II G C +  F+    LL EM   GLT N  +  T++DA +K G 
Sbjct: 265 LKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGH 324

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+  ++ M++   +  +VT+  LI G C+ G V EA     +    GL PN   YT 
Sbjct: 325 IVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTP 384

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   CK+   +RA N   EM +R   PD   Y AL+ G +       AL ++ +M E G
Sbjct: 385 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 444

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y  L+ GL +   L  A++L  EM+ + +LPD  +  +L+      GN+DEA 
Sbjct: 445 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 504

Query: 241 ELQNEMMGRGLLSG 254
           +L    + +G+  G
Sbjct: 505 KLFELTIEKGMNPG 518



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 124/241 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D+  Y T+I G C + K  ++  LL +    GL  N    T L+ AY K G    A +
Sbjct: 341 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 400

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
            L EM +   +  +VT+  L+ GL  +G V  A+    +M + G+ P+  +Y  L+ GLC
Sbjct: 401 WLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLC 460

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           KK  +  A+ L  EM  + ++PD   Y  L+DG++++ +  EA  L     E G++  + 
Sbjct: 461 KKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIV 520

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +++ G  + G +++A    + M  R + PDE    +++  + ++ ++D A ++  EM
Sbjct: 521 GYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREM 580

Query: 247 M 247
           +
Sbjct: 581 V 581



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 115/247 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K DL  YG ++ GL +  + + +  +  +M E G+  +  I   LM    K  +
Sbjct: 405 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFK 464

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EMLD  +      +  L+DG  ++G + EA   F    + G++P +  Y A
Sbjct: 465 LPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNA 524

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G CK   ++ A    + M KR + PD   Y+ +IDGY+K      A  +   M ++ 
Sbjct: 525 MIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMK 584

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YTSL+ G  R G L  +  +F EM   G++P+ +    L+    +   + +A 
Sbjct: 585 CKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAA 644

Query: 241 ELQNEMM 247
               EM+
Sbjct: 645 SFFEEML 651



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 112/218 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  D  +Y  ++ GLC + K   +KLLL+EM +  +  +  +  TL+D + + G   E
Sbjct: 443 RGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDE 502

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L +  ++  +   +V +  +I G CK G++++A+    RM    L P+   Y+ +ID
Sbjct: 503 ARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVID 562

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G  K++ ++ A+ +F EM K    P+   YT+LI+G+ +      +L +   M   G+  
Sbjct: 563 GYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVP 622

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           ++  Y+ L+    +   L +A   F EM+    +P+++
Sbjct: 623 NVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDV 660



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 118/250 (47%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK +  +   Y  +I   C +  ++ +   L EM E G   + V    L+     AGE  
Sbjct: 372 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 431

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            AL++ ++ML+  +      + +L+ GLCK   +  A      M D  + P+  VY  L+
Sbjct: 432 VALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLV 491

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG  +   ++ AR LF+   ++ M P    Y A+I GY K    K+A+   NRM +  + 
Sbjct: 492 DGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLA 551

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   Y++++ G  +   L  A+ +F EM+     P+ +   SL+     +G++  ++++
Sbjct: 552 PDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKI 611

Query: 243 QNEMMGRGLL 252
             EM   GL+
Sbjct: 612 FREMQACGLV 621



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C     +D+   ++ MK+  L  +    +T++D Y K  +   A  +  EM+
Sbjct: 522 YNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV 581

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             + +  VVT+  LI+G C+ G +  ++  F  M   GL PNV  Y+ LI   CK+  + 
Sbjct: 582 KMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLI 641

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKH---------ESFKEA-----LNLKNRMTE 178
            A + F+EM     +P+   +  L++G+ K+           F+E      LN   RM  
Sbjct: 642 DAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMIS 701

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            G      AY S++  L + G  + A  L ++M  +G +PD +  ++LL
Sbjct: 702 DGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALL 750



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 113/250 (45%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+    ++  Y T+I G C +   E +  L  E+K  G          +++ + K G+  
Sbjct: 232 GQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFK 291

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
               LL EM    + V V  +  +ID   K G + +A++    M + G  P++  Y  LI
Sbjct: 292 AIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLI 351

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C+   +  A  L ++   + ++P+  +YT LI  Y K   +  A N    MTE G  
Sbjct: 352 SGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHK 411

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            DL  Y +LV GL   G +  A  +  +M+ RG+ PD  +   L+    ++  +  A  L
Sbjct: 412 PDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLL 471

Query: 243 QNEMMGRGLL 252
             EM+ + +L
Sbjct: 472 LAEMLDQSVL 481



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 4/213 (1%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEML--DSRIEVTVVTF--CVLIDGLCKSGLVREA 99
           + + C +L++   K G    A  L DEML  D   +  V  +  C+++ GLCK G + E 
Sbjct: 164 DVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEG 223

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
                     G  PN+  Y  LIDG CKK  +E A  LF E+  +  +P    Y A+I+G
Sbjct: 224 RKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIING 283

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           + K   FK    L   M   G+ +++  Y +++    + GH+ +A      MI  G  PD
Sbjct: 284 FCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPD 343

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +   +L+      G + EA +L  + +G+GL+
Sbjct: 344 IVTYNTLISGSCRDGKVSEADQLLEQALGKGLM 376



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 111/257 (43%), Gaps = 14/257 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +++  D   Y T+I G   +   + ++ +  EM +     N V  T+L++ + + G+
Sbjct: 545 MKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGD 604

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              +L +  EM    +   VVT+ +LI   CK   + +A  +F  M      PN   +  
Sbjct: 605 LHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNY 664

Query: 121 LIDGLCK--------------KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
           L++G  K              +N      N F  M      P + AY +++    ++  F
Sbjct: 665 LVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMF 724

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           + AL L N+MT  G   D  ++ +L+ G+   G  +E + +    +    L   +   S+
Sbjct: 725 RTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSI 784

Query: 227 LKKHYERGNMDEAIELQ 243
           L ++  +G  + ++ LQ
Sbjct: 785 LDQYLPQGTSEASVILQ 801



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 5/195 (2%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID-YFGRMPDFGLHPNVAVYTA 120
           SE   +L+ M    +  T     ++I     SGLV +A++ Y+  +  +   P+V    +
Sbjct: 111 SEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNS 170

Query: 121 LIDGLCKKNCIERARNLFDEMPK----RDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           L++ L K   IE AR L+DEM +     D   D  +   ++ G  K    +E   L    
Sbjct: 171 LLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDR 230

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              G   ++  Y +L+ G  + G ++ A  LF E+  +G LP      +++    ++G+ 
Sbjct: 231 WGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDF 290

Query: 237 DEAIELQNEMMGRGL 251
                L  EM  RGL
Sbjct: 291 KAIDRLLMEMNSRGL 305


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 130/245 (53%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  + T+I GLC +     +  ++++M  NG T N +  TTL+D + K  +  EA  
Sbjct: 377 RPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGY 436

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L+EM     E+ ++ + VL+  LCK+G V +A+D  G M D G  P++  +  LI GLC
Sbjct: 437 VLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLC 496

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K +  E A  L+ +M    +I +T  Y  LI  +L+  + +EAL L N M   G  LD  
Sbjct: 497 KVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEI 556

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y  L+    + G  ++A  LF EM+ + ++P  I C  L+      G +  A+EL  +M
Sbjct: 557 TYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDM 616

Query: 247 MGRGL 251
           + RGL
Sbjct: 617 IHRGL 621



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 130/239 (54%), Gaps = 5/239 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL-DEM 71
           YG ++ GLC   K +++++LL+++     T N V  T L++ Y K+G   EA + L D+M
Sbjct: 316 YGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDKM 371

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           + +     V TF  LI GLCK GL+  A+D    M   G  PN+  YT L+DG CKKN +
Sbjct: 372 IKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQL 431

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  + +EM  +    +   Y  L+    K+    +AL++   M++ G   D+  + +L
Sbjct: 432 EEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTL 491

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++GL +    ++A  L+ +M+  G++ + +   +L+      G + EA++L N+M+ RG
Sbjct: 492 IFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRG 550



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  + T+I+GLC   + ED+  L  +M  +G+ ANTV   TL+ A+ + G 
Sbjct: 476 MSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGA 535

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L+++ML     +  +T+  LI   CK G   +A+  F  M    L P+      
Sbjct: 536 IQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNL 595

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC+   +  A  L  +M  R + PD   Y +LI+G  K  + +EA NL N++   G
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   Y +L+    R G   +A +L    +    +P+++
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDV 696



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 128/252 (50%), Gaps = 5/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +   +  +G ++  LC+ ++ +++  LL +M ++G   N+V+  TL+ A  K   
Sbjct: 199 MLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDR 258

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL LL+EM        V TF  +I GLC+   + E      RM   G  PN   Y  
Sbjct: 259 VNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGV 318

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA-LNLKNRMTEV 179
           L++GLC+   ++ A+ L +++P     P+   +T LI+GY+K     EA   L ++M + 
Sbjct: 319 LMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTILINGYVKSGRLDEANAFLYDKMIKN 374

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  + +L+ GL + G +  A  + ++M   G  P+ I   +LL    ++  ++EA
Sbjct: 375 GCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEA 434

Query: 240 IELQNEMMGRGL 251
             + NEM  +G 
Sbjct: 435 GYVLNEMSAKGF 446



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 120/274 (43%), Gaps = 35/274 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       +L  Y T++ G C +++ E++  +L+EM   G   N +    L+ A  K G+
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK---------------------------- 92
             +AL +L EM D   +  + TF  LI GLCK                            
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525

Query: 93  -------SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                   G ++EA+     M   G   +   Y  LI   CK    E+A  LFDEM ++D
Sbjct: 526 LIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD 585

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P   +   LI+G  +      AL L   M   G+  D+  Y SL+ GL + G+++EA 
Sbjct: 586 LVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAF 645

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            LF+++   GI PD I   +L+  H   G  D+A
Sbjct: 646 NLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDA 679



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 1/236 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I  L    +F+    LL ++KE G+     +   +M  Y +A  P +A  +L +M
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163

Query: 72  LDSRI-EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
                 E T  ++ V++D L  +     A + F  M   G+ P V  +  ++  LC  N 
Sbjct: 164 KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNE 223

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           ++ A +L  +M K   +P++  Y  LI    K +   EAL L   M  +G   D++ +  
Sbjct: 224 VDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFND 283

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +++GL R   + E   L   M+ RG  P++I    L+      G +DEA  L N++
Sbjct: 284 VIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV 339



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 69/150 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C     E +  L  EM    L  + + C  L++   + G+   AL LL +M+
Sbjct: 558 YNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMI 617

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   VVT+  LI+GLCK G +REA + F ++   G+ P+   Y  LI   C+    +
Sbjct: 618 HRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFD 677

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
            A  L     +   IP+   +  L+  ++K
Sbjct: 678 DAYLLLLRGVENAFIPNDVTWYILVSNFIK 707



 Score = 42.7 bits (99), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 52/113 (46%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I GLC   K  ++  LL +M   GL  + V   +L++   K G   EA +L +++    
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           I+   +T+  LI   C++G+  +A     R  +    PN   +  L+    K+
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKE 708


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 109/210 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  +Y T++ G C +     ++    EM+  GL  + V  TTL++   +AGE  EA  +L
Sbjct: 363 DEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVL 422

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EML  R++V  VT+ VL+DG CK G + EA      M   G+ PNV  YTAL DGLCK+
Sbjct: 423 QEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQ 482

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  L  EM  + +  +   Y +LI+G  K     +A+     M   G+  D+  Y
Sbjct: 483 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTY 542

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           T+L+  L + G L  A  L  EM+  GI P
Sbjct: 543 TTLIDALCKSGELDRAHDLLQEMLDNGIKP 572



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ +   Y ++I GLC     + +   +++M   GL  +    TTL+DA  K+GE
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EMLD+ I+ T+VT+ VL++G C SG V         M +  +HPN   Y +
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C  N ++    ++  M  R++ P+   Y  LI G+ K  S KEA    N M E G
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             L  ++Y++L+  L++     EAR LFH+M   G   +  +    +  ++   N++  +
Sbjct: 675 FRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATL 734

Query: 241 ELQNEMM 247
            L +E++
Sbjct: 735 ALCDELV 741



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 122/243 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  YG +I G C   + E++  LL +M   G+  N  + T+++      G  S+AL+++
Sbjct: 293 DVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVV 352

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M+  ++ +    +  ++ G C  G +  A  +F  M   GL  +   YT LI+GLC+ 
Sbjct: 353 EDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRA 412

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  +  EM  R +  D   YT L+DGY K     EA  + N M + GV  ++  Y
Sbjct: 413 GELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTY 472

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L  GL + G +Q A  L HEM  +G+  +     SL+    + G +D+A+    +M  
Sbjct: 473 TALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDA 532

Query: 249 RGL 251
            GL
Sbjct: 533 AGL 535



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +  D   Y T+I GLC   + ++++ +L EM    L  + V  T L+D Y K G+
Sbjct: 390 MQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGK 449

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + + M+   +   VVT+  L DGLCK G V+ A +    M + GL  N   Y +
Sbjct: 450 MAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 509

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +++A     +M    + PD   YT LID   K      A +L   M + G
Sbjct: 510 LINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  L+ G    G ++  + L   M+ + I P+     SL+K++    NM    
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTT 629

Query: 241 ELQNEMMGRGL 251
           E+   M  R +
Sbjct: 630 EIYKGMCSRNV 640



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ +  +Y +++  LC + +  D+  ++ +M  + +  +  + TT++  +   G+
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A    DEM    +    VT+  LI+GLC++G ++EA      M    L  +   YT 
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTV 439

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG CK+  +  A  + + M +R + P+   YTAL DG  K    + A  L + M+  G
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++L+   Y SL+ GL + G+L +A     +M   G+ PD     +L+    + G +D A 
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAH 559

Query: 241 ELQNEMMGRGL 251
           +L  EM+  G+
Sbjct: 560 DLLQEMLDNGI 570



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  ++ G C   K  ++  + + M + G+  N V  T L D   K G+
Sbjct: 425 MLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGD 484

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM +  +E+   T+  LI+GLCK+G + +A+     M   GL P+V  YT 
Sbjct: 485 VQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTT 544

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++RA +L  EM    + P    Y  L++G+      +    L   M E  
Sbjct: 545 LIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN 604

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y SL+       +++    ++  M  R + P+E     L+K H +  +M EA 
Sbjct: 605 IHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQ 664

Query: 241 ELQNEMMGRGL 251
              NEM+ +G 
Sbjct: 665 YFHNEMIEKGF 675



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 46/258 (17%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           S  LL  +++ G++ +   C  ++          EA+ L   + D      V ++ +L+ 
Sbjct: 219 SAPLLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDK----NVCSYNILLK 270

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            LC +G V +A   F  M      P+V  Y  LI G C    +E A  L D+M  R + P
Sbjct: 271 VLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEP 327

Query: 149 DTTAYTALI-----------------------------------DGYLKHESFKEALNLK 173
           + T YT+++                                    G+        A    
Sbjct: 328 NATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWF 387

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
           + M   G+  D   YT+L+ GL R G L+EA  +  EM+ R +  DE+    L+  + +R
Sbjct: 388 DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKR 447

Query: 234 GNMDEAIELQNEMMGRGL 251
           G M EA ++ N M+ RG+
Sbjct: 448 GKMAEAFQVHNTMVQRGV 465



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 72/176 (40%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK  +  Y  ++ G C+  + E  K LL  M E  +  N     +LM  Y          
Sbjct: 570 IKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTT 629

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +   M    +E    T+ +LI G CK+  ++EA  +   M + G     + Y+ALI  L
Sbjct: 630 EIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLL 689

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            KK     AR LF +M K     +   Y   ID     ++ +  L L + + E  +
Sbjct: 690 NKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASI 745



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 58/147 (39%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI  +   Y +++   CI +  + +  +   M    +  N      L+  + KA  
Sbjct: 600 MLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARS 659

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA    +EM++    +T  ++  LI  L K     EA   F  M   G      VY  
Sbjct: 660 MKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI 147
            ID    ++ +E    L DE+ +  ++
Sbjct: 720 YIDFNFNEDNLEATLALCDELVEASIV 746


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 133/271 (49%), Gaps = 35/271 (12%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  LC + KF+D K  LSEM+ NG+ A+ V   TL+ AY + G   EA  +++ M D  
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++ ++ T+  +I+GLCK G    A      M + GL P+   Y  L+   C+++    A+
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK 243

Query: 136 NLFDEMPK------------------------------RDM-----IPDTTAYTALIDGY 160
            +F EM +                              RDM     +PD   YT L+ GY
Sbjct: 244 EIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGY 303

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            ++ +  EAL +++ M E G  LD+ AY +++ GL +   L +A  LF EM+ RG LPD 
Sbjct: 304 CRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDF 363

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               +L+  H + GNM +A+ L   M  R +
Sbjct: 364 YTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 394



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 118/216 (54%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+  +G+  N      +++A  K G+  +  S L EM  + I   +VT+  LI   C+ G
Sbjct: 108 EVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREG 167

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
           L+ EA +    M D GL P++  Y A+I+GLCKK    RA+ +  EM    + PDTT Y 
Sbjct: 168 LLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYN 227

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            L+    + ++F EA  +   M   GV  DL +++SL+   SR  HL +A V F +M   
Sbjct: 228 TLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKF 287

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G++PD ++   L+  +   GNM EA+++++EM+ +G
Sbjct: 288 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 323



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 119/243 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   + T+I G C +     +  L   M +  +  + V   TL+D + K GE  +A  L 
Sbjct: 362 DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW 421

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+  +I    +T+ +LI+  C  G V EA   +  M + G+ P +     +I G C+ 
Sbjct: 422 DGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRS 481

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
               +A      M  + + PD  +Y  LI+G+++ ++  +A    N+M + G+  D+  Y
Sbjct: 482 GDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITY 541

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             ++ G  R G +QEA ++  +MI +GI PD     +L+  H  + N++EA    +EM+ 
Sbjct: 542 NVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQ 601

Query: 249 RGL 251
           RG 
Sbjct: 602 RGF 604



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 117/222 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NIK D+  Y T+I G C   + E +  L   M    +  N +    L++AY   G 
Sbjct: 389 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 448

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  L D M++  I+ T+VT   +I G C+SG   +A ++ GRM   G+ P+   Y  
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G  +++ +++A    ++M K  ++PD   Y  +++G+ +    +EA  +  +M E G
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           ++ D + YT+L+ G     +L EA     EM+ RG  PD++ 
Sbjct: 569 INPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDVF 610



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 135/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K  L  Y  II GLC + ++  +K +L EM   GL+ +T    TL+    +   
Sbjct: 179 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 238

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  +  EML   +   +V+F  LI    ++  + +A+ YF  M  FGL P+  +YT 
Sbjct: 239 FSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 298

Query: 121 LI-----------------------------------DGLCKKNCIERARNLFDEMPKRD 145
           L+                                   +GLCK+  +  A  LFDEM +R 
Sbjct: 299 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 358

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            +PD   +T LI G+ +  +  +AL+L   MT+  +  D+ AY +L+ G  + G +++A 
Sbjct: 359 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 418

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L+  MI R I P+ I    L+  +   G++ EA  L + M+ +G+
Sbjct: 419 ELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGI 464



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL  + ++I         + + +   +MK+ GL  + VI T LM  Y + G 
Sbjct: 249 MLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGN 308

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL + DEML+    + V+ +  +++GLCK  ++ +A   F  M + G  P+   +T 
Sbjct: 309 MLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTT 368

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   + +A +LF  M +R++ PD  AY  LIDG+ K    ++A  L + M    
Sbjct: 369 LIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRK 428

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y  L+      GH+ EA  L+  MI +GI P  + C +++K +   G+  +A 
Sbjct: 429 IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKAD 488

Query: 241 ELQNEMMGRGL 251
           E    M+ +G+
Sbjct: 489 EFLGRMIAKGV 499



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 115/252 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D  +Y  ++ G C      ++  +  EM E G   + +   T+++   K   
Sbjct: 284 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKM 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L DEM++        TF  LI G C+ G + +A+  FG M    + P++  Y  
Sbjct: 344 LTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNT 403

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +E+A  L+D M  R + P+   Y  LI+ Y       EA  L + M E G
Sbjct: 404 LIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG 463

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   L    +++ G  R G   +A      MI +G+ PD I   +L+       NMD+A 
Sbjct: 464 IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAF 523

Query: 241 ELQNEMMGRGLL 252
              N+M   GLL
Sbjct: 524 LWINKMEKEGLL 535



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 101/217 (46%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           ++  G   +   C +L+    K      A  +  E++ S IE+ V T  ++++ LCK G 
Sbjct: 74  LRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGK 133

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
             +   +   M   G++ ++  Y  LI   C++  +E A  + + M  + + P    Y A
Sbjct: 134 FDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNA 193

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +I+G  K   +  A  +   M  +G+  D   Y +L+    R  +  EA+ +F EM+ +G
Sbjct: 194 IINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG 253

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           ++PD +   SL+       ++D+A+    +M   GL+
Sbjct: 254 VVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLV 290



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 3/230 (1%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           S+ E  + L+S M  N  T N ++   L+  Y +A +  E       +L S+  +  +  
Sbjct: 28  SRVEVVEALVSSMCGNCGT-NNLVFDLLIRTYVQARKLREGTEAF-RILRSKGYLVSINA 85

Query: 84  C-VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           C  L+ GL K   V  A +    +   G+  NV     +++ LCK    +  ++   EM 
Sbjct: 86  CNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEME 145

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
              +  D   Y  LI  Y +    +EA  + N M + G+   L  Y +++ GL + G   
Sbjct: 146 GNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYA 205

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            A+ +  EM+  G+ PD     +LL +   R N  EA E+  EM+ +G++
Sbjct: 206 RAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVV 255


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 118/252 (46%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + D+  Y TII GLC   K  ++  ++ EM E G+  +    T ++D   +AG+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  +M++       V +  LI+GLCK   +  A      M   G  P+   Y  
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR--MTE 178
           ++ GLC+   +  A+  FD MP R   PD  AY  L+D   K     EA  L     M +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             V  DL  Y +L+ G  R     EA  LF ++I +G +PD +   S+L     + NMDE
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 239 AIELQNEMMGRG 250
           A E+  +M+  G
Sbjct: 241 AEEMFKKMVDSG 252



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+ L   +I  LC   K +D+  +L EM + G   + V    L+D   K   
Sbjct: 283 MTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 342

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L   M+D+     +V++ V+++GLCK+  V +A   F RM +  L P+V  +  
Sbjct: 343 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 402

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   ++ A++L D M + +++PD    T L+ G  + +   EA+ L   M E G
Sbjct: 403 LMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG--ILPDEILCISLLKKHYERGNMDE 238
              D+  +  ++ GL R G L +A + F  M+       PD +   +L+    E G +D+
Sbjct: 463 TVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQ 522

Query: 239 AIELQNEMMGRG 250
           A++   +M G G
Sbjct: 523 AVDYFQQMTGSG 534



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 121/251 (48%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K    D   Y +I+ GL  +S  ++++ +  +M ++G   N    + ++  + + G  +
Sbjct: 215 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMA 274

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
             L L +EM + R    V+    +ID LCK+  V +A      M   G  P+V  Y  L+
Sbjct: 275 RCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 334

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK N +++A  LF  M      PD  +Y+ +++G  K     +A  L +RM E  + 
Sbjct: 335 DGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLV 394

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  +  L+ GL + G L EA+ L   M    +LPD + C +L+         DEA+ L
Sbjct: 395 PDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRL 454

Query: 243 QNEMMGRGLLS 253
              M+ +G ++
Sbjct: 455 FQYMVEKGTVA 465



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 108/207 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ G C          L  EM E   + + ++C  ++D   KA +  +A  +L+EM 
Sbjct: 260 YSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMS 319

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VVT+ +L+DGLCK+ LV +A + F  M D G  P++  Y+ +++GLCK N + 
Sbjct: 320 KIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVH 379

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR LFD M +R ++PD   +  L+DG  K     EA +L + M+E  V  D    T+L+
Sbjct: 380 DARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLM 439

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
            GL R     EA  LF  M+ +G + D
Sbjct: 440 HGLCRDKRTDEAVRLFQYMVEKGTVAD 466



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 123/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL  Y T+I G C   K +++  L  ++   G   +TV   +++    +   
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +  +M+DS       T+ +++ G C+ G +   ++ +  M +    P+V +  A
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNA 297

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   ++ A  + +EM K   +PD   Y  L+DG  K     +A  L + M + G
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ +Y+ ++ GL +   + +ARVLF  MI R ++PD +    L+    + G +DEA 
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417

Query: 241 ELQNEMMGRGLL 252
           +L + M    +L
Sbjct: 418 DLLDVMSEHNVL 429



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 2/213 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  ++ GLC  +K  D+++L   M E  L  + V    LMD   KAG+  EA  LL
Sbjct: 361 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M +  +    VT   L+ GLC+     EA+  F  M + G   +V  +  ++ GLC++
Sbjct: 421 DVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCRE 480

Query: 129 NCIERARNLFDEMPKRD--MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
             + +A   F  M K D    PD   YT L++  ++     +A++   +MT  G   D  
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYV 540

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           AY +L+ GL + G   +A  L   M  +G L D
Sbjct: 541 AYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 2/179 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  D+  +  ++ GLC   K +++K LL  M E+ +  + V CTTLM    +     E
Sbjct: 391 RKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDE 450

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--PDFGLHPNVAVYTAL 121
           A+ L   M++      V+   +++ GLC+ G + +A+ +F  M   D    P+V  YT L
Sbjct: 451 AVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTL 510

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ L +   +++A + F +M      PD  AY  L++G  K     +A  L   M E G
Sbjct: 511 VNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 75/151 (49%), Gaps = 2/151 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  D     T++ GLC + + +++  L   M E G  A+ +    ++    + G+
Sbjct: 423 MSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGK 482

Query: 61  PSEALSLLDEMLDSRIEVT--VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
            ++AL     M+ S  E +  VVT+  L++ L ++G V +A+DYF +M   G  P+   Y
Sbjct: 483 LAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAY 542

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
             L++GL K+    +A  L   M ++  + D
Sbjct: 543 NTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  134 bits (336), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 144/288 (50%), Gaps = 36/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
           M   NI+ +  +Y TII GLC   +   ++ LL+ M +E     + +   +++D + K G
Sbjct: 538 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEG 597

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           E   A++  +EM  + I   V+T+  L+DGLCK+  + +A++    M + G+  ++  Y 
Sbjct: 598 EMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 657

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ALI G CKK+ +E A  LF E+ +  + P    Y +LI G+    +   AL+L  +M + 
Sbjct: 658 ALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKD 717

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI--------------- 224
           G+  DL  YT+L+ GL + G+L  A  L+ EM   G++PDEI+                 
Sbjct: 718 GLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKV 777

Query: 225 --------------------SLLKKHYERGNMDEAIELQNEMMGRGLL 252
                               +++  HY  GN+DEA  L +EM+ +G+L
Sbjct: 778 VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 825



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 129/252 (51%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  ++  Y  ++   C +   + ++ + S M E GL  N    + L+D  FK  +
Sbjct: 468 MESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHD 527

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
               L ++++M  S IEV  V +  +I+GLCK G   +A +    M  +     +   Y 
Sbjct: 528 EQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYN 587

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++IDG  K+  ++ A   ++EM    + P+   YT+L+DG  K+    +AL +++ M   
Sbjct: 588 SIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNK 647

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV LD+ AY +L+ G  +  +++ A  LF E++  G+ P + +  SL+      GNM  A
Sbjct: 648 GVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAA 707

Query: 240 IELQNEMMGRGL 251
           ++L  +M+  GL
Sbjct: 708 LDLYKKMLKDGL 719



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 2/206 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +K D+P YG +I G C +S  E +  L SE+ E GL  +  +  +L+  +   G 
Sbjct: 644 MKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGN 703

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L  +ML   +   + T+  LIDGL K G +  A D +  M   GL P+  +YT 
Sbjct: 704 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTV 763

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GL KK    +   +F+EM K ++ P+   Y A+I G+ +  +  EA  L + M + G
Sbjct: 764 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 823

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARV 206
           +  D   +  LV G  + G  Q  R 
Sbjct: 824 ILPDGATFDILVSG--KVGKFQPIRA 847



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 35/242 (14%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G   E + + +     EM  NG++ N +  T+LMD   K     +AL + DEM 
Sbjct: 586 YNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMK 645

Query: 73  DSRIEVTVVTFCVLIDGLCK-------SGLVRE--------------------------- 98
           +  +++ +  +  LI G CK       S L  E                           
Sbjct: 646 NKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMV 705

Query: 99  -AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            A+D + +M   GL  ++  YT LIDGL K+  +  A +L+ EM    ++PD   YT ++
Sbjct: 706 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIV 765

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +G  K   F + + +   M +  V  ++  Y +++ G  R G+L EA  L  EM+ +GIL
Sbjct: 766 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 825

Query: 218 PD 219
           PD
Sbjct: 826 PD 827



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 42/282 (14%)

Query: 11  PLYGTIIWGLCIE-----SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           P   ++ + + IE      + E +     +M+  GLT +     T++  + K  +  EAL
Sbjct: 369 PSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEAL 428

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L DE  ++ +   V     ++  LCK G + +A +   +M   G+ PNV  Y  ++   
Sbjct: 429 KLFDESFETGL-ANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAH 487

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+K  ++ AR +F  M ++ + P+   Y+ LIDG  K+   +  L + N+MT   ++++ 
Sbjct: 488 CRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNG 547

Query: 186 NAYTSLVWGLSRCGHLQEARVL------------------------------------FH 209
             Y +++ GL + G   +AR L                                    + 
Sbjct: 548 VVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYE 607

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           EM   GI P+ I   SL+    +   MD+A+E+++EM  +G+
Sbjct: 608 EMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGV 649



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 2/249 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGL-TANTVICTTLMDAYFKAGEPS 62
           +  + D  LY   +   C       +  LL EMKE  L   +    T+++ A  K G   
Sbjct: 261 RGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNME 320

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+   DEM+   I + VV    LI G CK+  +  A+D F +M + G  PN   ++ LI
Sbjct: 321 DAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLI 380

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +   K   +E+A   + +M    + P       +I G+LK +  +EAL L +   E G+ 
Sbjct: 381 ERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 440

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
                 T L W L + G + +A  L  +M  RGI P+ +   +++  H  + NMD A  +
Sbjct: 441 NVFICNTILSW-LCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTV 499

Query: 243 QNEMMGRGL 251
            + M+ +GL
Sbjct: 500 FSNMLEKGL 508



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 105/221 (47%), Gaps = 1/221 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           ++++M E G+          + A  +    +EA  L   M+   ++    T  +L+    
Sbjct: 184 IVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASL 243

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM-IPDT 150
           +     EA++ F R  + G  P+  +Y+  +   CK   +  A +L  EM ++ + +P  
Sbjct: 244 REEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQ 303

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             YT++I   +K  + ++A+  K+ M   G+ +++ A TSL+ G  +   L  A  LF++
Sbjct: 304 ETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYK 363

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M   G  P+ +    L+++  + G M++A+E   +M   GL
Sbjct: 364 MENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGL 404



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 37/278 (13%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL---- 65
           +P     +  L   +   ++K L S M   G+  +      LM A  +  +P+EAL    
Sbjct: 197 VPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFS 256

Query: 66  -------------------------------SLLDEMLDSRIEV-TVVTFCVLIDGLCKS 93
                                          SLL EM + ++ V +  T+  +I    K 
Sbjct: 257 RAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 316

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G + +AI +   M   G+  NV   T+LI G CK N +  A +LF +M      P++  +
Sbjct: 317 GNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTF 376

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           + LI+ + K+   ++AL    +M  +G+   +    +++ G  +    +EA  LF E   
Sbjct: 377 SVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 436

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G L +  +C ++L    ++G +D+A EL  +M  RG+
Sbjct: 437 TG-LANVFICNTILSWLCKQGKIDKATELLRKMESRGI 473



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 6/210 (2%)

Query: 48  CTTLMDAYFKAGEPSEALSLL-DEMLDSR----IEVTVVTFCVLIDGLCKSGLVREAIDY 102
            + L+  Y     P+   S+L   ++DS      EV    F  L++   K      A+D 
Sbjct: 125 ASDLLIRYVSTSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDI 184

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
             +M + G+ P V      +  L ++N I  A+ L+  M    +  D      L+   L+
Sbjct: 185 VNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLR 244

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI-LPDEI 221
            E   EAL + +R  E G + D   Y+  V    +  +L  A  L  EM  + + +P + 
Sbjct: 245 EEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQE 304

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              S++    ++GNM++AI  ++EM+  G+
Sbjct: 305 TYTSVILASVKQGNMEDAIRWKDEMVSDGI 334



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 64/132 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ DL  Y T+I GL  E     +  L +EM+  GL  + ++ T +++   K G+  + +
Sbjct: 719 LRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVV 778

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + +EM  + +   V+ +  +I G  + G + EA      M D G+ P+ A +  L+ G 
Sbjct: 779 KMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGK 838

Query: 126 CKKNCIERARNL 137
             K    RA +L
Sbjct: 839 VGKFQPIRAASL 850


>gi|222641578|gb|EEE69710.1| hypothetical protein OsJ_29377 [Oryza sativa Japonica Group]
          Length = 577

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 131/255 (51%), Gaps = 6/255 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T+I  LC E    D++ L  EMKE G+  N      LM ++FK   
Sbjct: 199 MVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDN 258

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL    ++L   +    V F  LIDGLC++  + EA + F  MP + + P V VY +
Sbjct: 259 IKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNS 318

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  +    + A   F E+ ++ + PD    + ++ G        +AL    RM+EVG
Sbjct: 319 LIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRG------LCDALVTCTRMSEVG 372

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+  +  Y+SL+ G S+ G ++ A  ++ EM+ +G+ P+ +   +L+  H + G+MD A 
Sbjct: 373 VEPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAF 432

Query: 241 ELQNEMMGRGLLSGS 255
            LQ EM  +G+ S +
Sbjct: 433 WLQKEMEEKGIYSNA 447



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 122/271 (45%), Gaps = 29/271 (10%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           LP    I+ GL           L  EM   G+  + V   TL++A    G+ ++A  + D
Sbjct: 138 LPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLINACRHQGDVAKAWEVWD 197

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           +M+  RI+  VVT+  +I  LC+   + +A   F  M + G+ PN+  Y AL+    K++
Sbjct: 198 QMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRD 257

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I+ A   + ++ K  ++P+   +T LIDG  +     EA N+   M    V   +  Y 
Sbjct: 258 NIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYN 317

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC-------------------------- 223
           SL+ G  R G+ QEA   F E+I +G+ PDE  C                          
Sbjct: 318 SLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDALVTCTRMSEVGVEPHV 377

Query: 224 ---ISLLKKHYERGNMDEAIELQNEMMGRGL 251
               SL+  H + G M+ A+ +  EM+ +G+
Sbjct: 378 VTYSSLIDGHSKNGEMEIAMAIYTEMVAKGV 408



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 14/241 (5%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K ++ D      ++ GLC      D+ +  + M E G+  + V  ++L+D + K GE   
Sbjct: 342 KGLRPDEFTCSIVVRGLC------DALVTCTRMSEVGVEPHVVTYSSLIDGHSKNGEMEI 395

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+++  EM+   +E  VVT+  LI G  K+G +  A      M + G++ N    + L+D
Sbjct: 396 AMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVD 455

Query: 124 GLCKKNCIERARNLFDEMP------KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           GLC++N ++ A     E        K   I ++  Y  LI G      + EA +  + M 
Sbjct: 456 GLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMR 515

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           + G+  D   YT ++ GL   G++  A +L+ +M+  G+ P +  C  +    + R ++D
Sbjct: 516 DSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTK--CAMVCPDIWSRESVD 573

Query: 238 E 238
            
Sbjct: 574 H 574



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 117/281 (41%), Gaps = 47/281 (16%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++ T+I GLC  ++  ++K +  +M    +     +  +L+   F++G   EAL+   E+
Sbjct: 280 IFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   +     T  +++ GLC      +A+    RM + G+ P+V  Y++LIDG  K   +
Sbjct: 340 IRKGLRPDEFTCSIVVRGLC------DALVTCTRMSEVGVEPHVVTYSSLIDGHSKNGEM 393

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL------ 185
           E A  ++ EM  + + P+   YTALI G+ K+     A  L+  M E G+  +       
Sbjct: 394 EIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVL 453

Query: 186 -----------------------------------NAYTSLVWGLSRCGHLQEARVLFHE 210
                                                Y +L++GL   G   EA   F  
Sbjct: 454 VDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSC 513

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M   G++PD      +++     G +  A+ L  +M+  G+
Sbjct: 514 MRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGV 554



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 3/168 (1%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VL+  L +  L  EA+  FGR+ +    P +    A++DGL K + + R   LFDEM  R
Sbjct: 111 VLVIALSQMALPDEALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEMLGR 167

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            M+P    Y  LI+         +A  + ++M    +D ++  YT+++  L     + +A
Sbjct: 168 GMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDA 227

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             LF EM   G+ P+     +L+  H++R N+  A+    +++  GL+
Sbjct: 228 EGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLV 275



 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 6/187 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++  +  Y ++I G     + E +  + +EM   G+  N V  T L+  + K G+
Sbjct: 368 MSEVGVEPHVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGD 427

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY---FGRMPDFGLHPNVA- 116
              A  L  EM +  I    +T  VL+DGLC+   V++A+ +   +        +P++A 
Sbjct: 428 MDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIAN 487

Query: 117 --VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
              Y  LI GL        A + F  M    M+PD   YT +I G         A+ L  
Sbjct: 488 SVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYA 547

Query: 175 RMTEVGV 181
            M +VGV
Sbjct: 548 DMVKVGV 554


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 131/259 (50%), Gaps = 15/259 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN + ++  Y TII  LC + +  ++  L SEM   G++ +     +L+ A     E
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL+EM+DS+I   VV+F  ++D LCK G V EA D   +M   G+ PNV  YTA
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C  + ++ A  +FD M  +  +P+  +Y  LI+GY K +   +A+ L   M    
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 371

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHY----- 231
           +  D   Y++L+ GL     LQ+A  LFHEM+    +P+     IL   L K  Y     
Sbjct: 372 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 431

Query: 232 ------ERGNMDEAIELQN 244
                 E  N+D  I++ N
Sbjct: 432 ALLKAIEGSNLDPDIQVNN 450



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 112/221 (50%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+++ + G   +T   TTL+   +  G+  EAL L D+M+       VVT+  LI+GLC
Sbjct: 118 VLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLC 177

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G    AI   G M      PNV  Y  +ID LCK   +  A NLF EM  + + PD  
Sbjct: 178 KVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIF 237

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y +LI        +K    L N M +  +  D+ ++ ++V  L + G + EA  +  +M
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 297

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           I RG+ P+ +   +L+  H     MDEA+++ + M+ +G +
Sbjct: 298 IQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 117/246 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  + T++  LC E K  ++  ++ +M + G+  N V  T LMD +    E
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + D M+       V+++  LI+G CK   + +A+  FG M    L P+   Y+ 
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 381

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    ++ A  LF EM     IP+   Y  L+D   K+    EA+ L   +    
Sbjct: 382 LIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 441

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D D+      + G+ R G L+ AR LF  +  +G+ PD      ++     RG +DEA 
Sbjct: 442 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 501

Query: 241 ELQNEM 246
           +L  EM
Sbjct: 502 KLFREM 507



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 121/246 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I G+ +E K  ++  L  +M   G   + V   TL++   K G  S A+ 
Sbjct: 128 QPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 187

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL  M+    +  V  +  +ID LCK   V EA + F  M   G+ P++  Y +LI  LC
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    L +EM    ++PD  ++  ++D   K     EA ++ ++M + GV+ ++ 
Sbjct: 248 NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVV 307

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YT+L+ G      + EA  +F  M+ +G +P+ I   +L+  + +   +D+A+ L  EM
Sbjct: 308 TYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 367

Query: 247 MGRGLL 252
             + L+
Sbjct: 368 CRQELI 373



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 3/231 (1%)

Query: 24  SKFEDSKLLLS---EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           +K +    LLS   +M   G+  N      L++++        A S+L ++L    +   
Sbjct: 72  AKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDT 131

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
            TF  LI G+   G + EA+  F +M   G  P+V  Y  LI+GLCK      A  L   
Sbjct: 132 ATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M +++  P+  AY  +ID   K     EA NL + M   G+  D+  Y SL+  L     
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +    L +EM+   I+PD +   +++    + G + EA ++ ++M+ RG+
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 113/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++  Y  ++ G C+ S+ +++  +   M   G   N +   TL++ Y K   
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 356

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L  EM    +    VT+  LI GLC    +++AI  F  M      PN+  Y  
Sbjct: 357 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 416

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK   +  A  L   +   ++ PD       IDG  +    + A +L + ++  G
Sbjct: 417 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG 476

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y+ ++ GL R G L EA  LF EM   G   +  +  ++ +          AI
Sbjct: 477 LQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAI 536

Query: 241 ELQNEMMGRGL 251
           +L  EM+ RG 
Sbjct: 537 QLLQEMVARGF 547



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 96/207 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + + +  L  EM    L  +TV  +TL+          +A++L  EM+
Sbjct: 344 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 403

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+ +L+D LCK+  + EA+     +    L P++ V    IDG+C+   +E
Sbjct: 404 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 463

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR+LF  +  + + PD   Y+ +I+G  +     EA  L   M E G  L+   Y ++ 
Sbjct: 464 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 523

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
            G  R      A  L  EM+ RG   D
Sbjct: 524 RGFLRNNETSRAIQLLQEMVARGFSAD 550



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 95/204 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y T+I GLC   + +D+  L  EM       N V    L+D   K    +EA++LL
Sbjct: 375 DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL 434

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +  S ++  +    + IDG+C++G +  A D F  +   GL P+V  Y+ +I+GLC++
Sbjct: 435 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRR 494

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  LF EM +     +   Y  +  G+L++     A+ L   M   G   D +  
Sbjct: 495 GLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTM 554

Query: 189 TSLVWGLSRCGHLQEARVLFHEMI 212
           T  V  LS  G  Q  + +  E +
Sbjct: 555 TLFVKMLSDDGLDQSLKQILREFV 578



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 90/209 (43%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +TV    L+ +  K    S  LSL  +M    I   + T  +LI+  C    V  A    
Sbjct: 60  STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVL 119

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            ++   G  P+ A +T LI G+  +  I  A +LFD+M      PD   Y  LI+G  K 
Sbjct: 120 AKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 179

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
            +   A+ L   M +     ++ AY +++  L +   + EA  LF EM+ +GI PD    
Sbjct: 180 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 239

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            SL+              L NEM+   ++
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIM 268



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 85/188 (45%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+S  + ML  +   + V F  L+  + K       +    +M  FG+ PN+     LI+
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             C  N +  A ++  ++ K    PDT  +T LI G        EAL+L ++M   G   
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRP 164

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y +L+ GL + G+   A  L   M+ +   P+     +++    +   + EA  L 
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 244 NEMMGRGL 251
           +EM+ +G+
Sbjct: 225 SEMVTKGI 232



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 43/95 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K ++ D+  Y  +I GLC     +++  L  EM ENG T N  I  T+   + +  E
Sbjct: 472 LSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNE 531

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
            S A+ LL EM+         T  + +  L   GL
Sbjct: 532 TSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 566



 Score = 40.8 bits (94), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 27/123 (21%), Positives = 54/123 (43%)

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N I+ A + F+ M +    P T  +  L+    K +     L+L ++M   G+  ++   
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+        +  A  +  +++  G  PD     +L++  Y  G + EA+ L ++M+G
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIG 159

Query: 249 RGL 251
            G 
Sbjct: 160 EGF 162


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 121/247 (48%), Gaps = 1/247 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLT-ANTVICTTLMDAYFKAGEPSEA 64
           ++ D+ L+ T+I GLC   K ED   LL EMK   +   NTV    L+D +FKAG    A
Sbjct: 353 VEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRA 412

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             L  +M +  ++  V+T   L+DGLCK G V  A+++F  M   GL  N A YTALI  
Sbjct: 413 HELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISA 472

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            C  N I RA   F+EM      PD   Y +LI G        +A  + +++   G  LD
Sbjct: 473 FCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLD 532

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
            + Y  L+ G  +   L+    L  EM   G+ PD I   +L+    + G+   A ++  
Sbjct: 533 RSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVME 592

Query: 245 EMMGRGL 251
           +M+  GL
Sbjct: 593 KMIKEGL 599



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 1/198 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y  +I G C + K E    LL+EM+E G+  +T+   TL+    K G+ + A  ++
Sbjct: 532 DRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVM 591

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDGLCK 127
           ++M+   +  +VVT+  +I   C    V E +  FG M     + PN  +Y  LID LC+
Sbjct: 592 EKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCR 651

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
            N ++RA +L ++M  + + P+TT Y A++ G    +   +A  L +RM E     D   
Sbjct: 652 NNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYIT 711

Query: 188 YTSLVWGLSRCGHLQEAR 205
              L   LS  G +++ +
Sbjct: 712 MEVLTEWLSAVGEIEKLK 729



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 7/218 (3%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   +   C  L+    +  +      LL EM   +I  +VVTF +L++ LCK+  + EA
Sbjct: 276 GGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEA 335

Query: 100 IDYFGRMPD------FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM-IPDTTA 152
           +  F R+         G+ P+V ++  LIDGLCK    E   +L +EM   ++  P+T  
Sbjct: 336 LQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVT 395

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y  LIDG+ K  +F  A  L  +M E GV  ++    +LV GL + G +  A   F+EM 
Sbjct: 396 YNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK 455

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G+G+  +     +L+       N++ A++   EM+  G
Sbjct: 456 GKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSG 493



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 108/247 (43%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++    T++ GLC   +   +    +EMK  GL  N    T L+ A+     
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+   +EML S      V +  LI GLC +G + +A     ++   G   + + Y  
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNV 538

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CKK  +ER   L  EM +  + PDT  Y  LI    K   F  A  +  +M + G
Sbjct: 539 LISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG 598

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEA 239
           +   +  Y +++       ++ E   +F EM     +P   +  ++L     R N +D A
Sbjct: 599 LRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRA 658

Query: 240 IELQNEM 246
           I L  +M
Sbjct: 659 ISLMEDM 665



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 1/214 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  +Y ++I GLCI  +  D+ +++S++K  G + +      L+  + K  +      LL
Sbjct: 497 DAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELL 556

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM ++ ++   +T+  LI  L K+G    A     +M   GL P+V  Y A+I   C K
Sbjct: 557 TEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSK 616

Query: 129 NCIERARNLFDEMPKRDMIP-DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
             ++    +F EM     +P +T  Y  LID   ++     A++L   M    V  +   
Sbjct: 617 KNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTT 676

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           Y +++ G+     L +A  L   M+     PD I
Sbjct: 677 YNAILKGVRDKKMLHKAFELMDRMVEEACRPDYI 710



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 50/278 (17%)

Query: 21  CIESK--FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
           C+E+     DS LL +++  +  + +  +C  L+    K+G   +AL +LDEM  +    
Sbjct: 150 CLENARLVNDSLLLFNQLDPS--SKSPQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGF 207

Query: 79  TVVTFCVLIDGLCKSGLV---REAIDYFGRMPDFGLHPNVAVYTALIDGLC--KKN---- 129
           + VT  ++   L +SG      E +    ++ + G+ P+    T L+  LC  +KN    
Sbjct: 208 S-VTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAW 266

Query: 130 ----C-------------------------IERARNLFDEMPKRDMIPDTTAYTALIDGY 160
               C                         I+R   L  EM KR + P    +  L++  
Sbjct: 267 EVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHL 326

Query: 161 LKHESFKEALNLKNRM------TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-IG 213
            K     EAL + +R+        VGV+ D+  + +L+ GL + G  ++   L  EM +G
Sbjct: 327 CKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMG 386

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               P+ +    L+   ++ GN D A EL  +M   G+
Sbjct: 387 NINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGV 424



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 1/140 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
           M  + ++  +  YG II   C +   ++   +  EM   + +  NTVI   L+DA  +  
Sbjct: 594 MIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNN 653

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +   A+SL+++M   R+     T+  ++ G+    ++ +A +   RM +    P+     
Sbjct: 654 DVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITME 713

Query: 120 ALIDGLCKKNCIERARNLFD 139
            L + L     IE+ ++  +
Sbjct: 714 VLTEWLSAVGEIEKLKHFVE 733


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 136/256 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +NI  ++  +  ++ G C E K  D+K++L+ M ++ +  + V   +LMD Y    +
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINK 321

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  + D M    +   V  +  +++G CK  +V EAI+ F  M    + PNV  Y++
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSS 381

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I  A  L DEM  R   P+   Y++++D   K+    +A+ L   + + G
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  YT L+ GL + G L++A+ +F +++ +G   D      +++   ++G  D+A+
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501

Query: 241 ELQNEMMGRGLLSGSK 256
            L ++M   G +  +K
Sbjct: 502 ALLSKMEDNGCIPNAK 517



 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 134/256 (52%), Gaps = 8/256 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   +IK D+  Y +++ G C  +K   +K +   M   G+ AN  I TT+++ + K   
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM 356

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L +EM   +I   VVT+  LIDGLCK G +  A+     M D G  PN+  Y++
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D LCK + +++A  L   +  + + PD   YT LI G  +    ++A N+   +   G
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNM 236
            +LD+ AYT ++ G    G   +A  L  +M   G +P+    E++ +SL    +E+   
Sbjct: 477 YNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSL----FEKDEN 532

Query: 237 DEAIELQNEMMGRGLL 252
           D A +L  EM+ RGLL
Sbjct: 533 DTAEKLLREMIVRGLL 548



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 128/250 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y  +I G    SK   +  L ++MK+  +  N      L+D + K G+
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGK 286

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  +L  M+   I+  VVT+  L+DG C    V +A D F  M   G+  NV +YT 
Sbjct: 287 VNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G CK   ++ A NLF+EM  R +IP+   Y++LIDG  K      AL L + M + G
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y+S++  L +  H+ +A  L   +  +GI PD      L+K   + G +++A 
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466

Query: 241 ELQNEMMGRG 250
            +  +++ +G
Sbjct: 467 NVFEDLLVKG 476



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  LL  +    +  N V+   ++D   KA   ++A  L  +M+
Sbjct: 169 YGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV 228

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             RI   V T+  LI G      +  AID F +M    ++PNV  +  L+DG CK+  + 
Sbjct: 229 AKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVN 288

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +   M K D+ PD   Y +L+DGY       +A ++ + M   GV  ++  YT++V
Sbjct: 289 DAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMV 348

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + EA  LF EM  R I+P+ +   SL+    + G +  A++L +EM  RG
Sbjct: 349 NGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 122/249 (48%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ +  +Y  II  +C      D+  L S+M    +  +      L+  +    + +
Sbjct: 194 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLN 253

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A+ L ++M    I   V TF +L+DG CK G V +A      M    + P+V  Y +L+
Sbjct: 254 YAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLM 313

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C  N + +A+++FD M    +I +   YT +++G+ K +   EA+NL   M    + 
Sbjct: 314 DGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKII 373

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y+SL+ GL + G +  A  L  EM  RG  P+ +   S+L    +  ++D+AI L
Sbjct: 374 PNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL 433

Query: 243 QNEMMGRGL 251
              +  +G+
Sbjct: 434 LTNLKDQGI 442



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 109/223 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           + +++ + G     +   TL+      G   +AL   D+++     +  V++  LI+GLC
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G +  A+    R+    + PN  +Y  +ID +CK   +  A +L+ +M  + + PD  
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y ALI G+        A++L N+M +  ++ ++  +  LV G  + G + +A+V+   M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           +   I PD +   SL+  +     +++A ++ + M   G+++ 
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIAN 340



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 92/205 (44%)

Query: 42  TANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           T  T     ++ +  KA   S ALSL  +M  + IE    TF +LI+   + GL   +  
Sbjct: 58  TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
            F ++   G HP    +  LI GLC K  I +A +  D++  +    D  +Y  LI+G  
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           K      AL L  R+    V  +   Y  ++  + +   + +A  L+ +M+ + I PD  
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237

Query: 222 LCISLLKKHYERGNMDEAIELQNEM 246
              +L+        ++ AI+L N+M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKM 262


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 116/217 (53%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M+  G+  +    +T ++A+ KA +   A  + +EM      +  VT+ V+I GLC+SG 
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           V EA  +   M D+GL P+   Y AL++GLCK + ++ A+ L DEM    + P+   Y  
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L+DG++K     EA ++   M   GV  +   Y +L+ GL + G L  A  L  EMI  G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           + PD      L++ H+++ + D A EL NEM   G+L
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGIL 450



 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 138/281 (49%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   YG ++ GLC  S+ +++K LL EM  +GL  N V+  TL+D + K G+ +EA 
Sbjct: 309 LSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAF 368

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSG-------LVRE-------------------- 98
            +L EM+ + ++   + +  LI GLCK G       L++E                    
Sbjct: 369 DILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGH 428

Query: 99  --------AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
                   A +    M + G+ PNV  Y  +I+GLC+    + A NL +EM    + P+ 
Sbjct: 429 FQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNA 488

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LI G+ K  +   A     +MT+  V  DL  Y SL+ GLS  G ++EA   + +
Sbjct: 489 FMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQ 548

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  RG++PDE     L+  + + GN+++A +L  +M+  GL
Sbjct: 549 VQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGL 589



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 125/249 (50%), Gaps = 1/249 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G   K D  +YG +I  L      E + ++L+E+++NGL  +  I ++L+    K  +
Sbjct: 619 MLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIAD 678

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LLDEM    +E  +V +  LIDG C+SG +  A + F  +   GL PN   YTA
Sbjct: 679 MEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTA 738

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   I  A +L+ EM  R + PD   Y  L  G       ++AL L   M   G
Sbjct: 739 LIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 798

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +++ + +LV G  + G LQE   L H M+ R I+P+      ++ +  + G + EA 
Sbjct: 799 Y-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAH 857

Query: 241 ELQNEMMGR 249
            +  E+  +
Sbjct: 858 RVFAELQQK 866



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 112/234 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC     E++     EM + GL+ +      LM+   K     EA +LLDEM 
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S ++  +V +  L+DG  K G   EA D    M   G+ PN  +Y  LI GLCK   + 
Sbjct: 341 CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  L  EM K  + PDT  Y  L+ G+ +      A  L N M   G+  ++ +Y  ++
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMI 460

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL + G  +EA  L  EMI  G+ P+  +   L+  H + GN+  A E   +M
Sbjct: 461 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKM 514



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C     E +  LL +M  +GL  N    T L++ YFK+ +  +  S+L  ML
Sbjct: 561 YSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSML 620

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S  +     + ++I  L +S  +  A      +   GL P++ +Y++LI GLCK   +E
Sbjct: 621 GSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADME 680

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L DEM K  + P    Y ALIDG+ +      A N+ + +   G+  +   YT+L+
Sbjct: 681 KAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALI 740

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  + G + +A  L+ EM+ RGI PD  +   L     +  ++++A+ L  EM  RG
Sbjct: 741 DGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 798



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 127/254 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  ++  YG +I GLC   + +++  LL EM   GL  N  +   L+  + K G 
Sbjct: 444 MRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGN 503

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A   L++M  + +   +  +  LI GL   G + EA +Y+ ++   GL P+   Y+ 
Sbjct: 504 ISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSG 563

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E+A  L  +M    + P+   YT L++GY K   +++  ++   M   G
Sbjct: 564 LIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSG 623

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D + Y  ++  LSR  +++ A ++  E+   G++PD  +  SL+    +  +M++A+
Sbjct: 624 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAV 683

Query: 241 ELQNEMMGRGLLSG 254
            L +EM   GL  G
Sbjct: 684 GLLDEMAKEGLEPG 697



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 124/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ +  +Y  +I GLC   +   +  LL EM + GL  +T     LM  +F+  +
Sbjct: 374 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHD 433

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL+EM +S I   V ++ ++I+GLC++G  +EA +    M   GL PN  +Y  
Sbjct: 434 KDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAP 493

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K+  I  A    ++M K ++ PD   Y +LI G       +EA     ++ + G
Sbjct: 494 LIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRG 553

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y+ L+ G  + G+L++A  L  +M+  G+ P+      LL+ +++  + ++  
Sbjct: 554 LVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVS 613

Query: 241 ELQNEMMGRG 250
            +   M+G G
Sbjct: 614 SILQSMLGSG 623



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  DL  Y ++I GL    + E+++   +++++ GL  +    + L+  Y K G 
Sbjct: 514 MTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGN 573

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL +ML+S ++    T+  L++G  KS    +       M   G  P+  +Y  
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGI 633

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L +   +E A  +  E+ K  ++PD   Y++LI G  K    ++A+ L + M + G
Sbjct: 634 VIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEG 693

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++  +  Y +L+ G  R G +  AR +F  ++ +G++P+ +   +L+  + + G++ +A 
Sbjct: 694 LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAF 753

Query: 241 ELQNEMMGRGL 251
           +L  EM+ RG+
Sbjct: 754 DLYKEMLDRGI 764



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 96/242 (39%), Gaps = 18/242 (7%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICT---TLMDAYFKAGEPSEALSLLD 69
           +  +   LC  S F  +  LL +M         V+ +    + D   ++  PS + ++LD
Sbjct: 118 FARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSPSPSTAVLD 177

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
                          VL+D   K+G VR A      M D GL P       L+  L + +
Sbjct: 178 ---------------VLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRAD 222

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +E    L   M    ++PD   Y+  I+ + K   F  A  +   M      ++   Y 
Sbjct: 223 AMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYN 282

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            ++ GL R G ++EA     EM+  G+ PD     +L+    +   + EA  L +EM   
Sbjct: 283 VMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCS 342

Query: 250 GL 251
           GL
Sbjct: 343 GL 344



 Score = 45.8 bits (107), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 1/145 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C      D+  L  EM + G+  +  +   L      A +  +AL L +EM 
Sbjct: 736 YTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMF 795

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + R    V  F  L+ G CK G ++E       M D  + PN      ++    K   + 
Sbjct: 796 N-RGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLG 854

Query: 133 RARNLFDEMPKRDMIPDTTAYTALI 157
            A  +F E+ ++      T   +L+
Sbjct: 855 EAHRVFAELQQKKASQSATDRFSLL 879


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  133 bits (335), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 131/280 (46%), Gaps = 36/280 (12%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  ++ D   +  ++ G C E +FE++  LL+ M   G + ++  CT ++ A+ + G   
Sbjct: 174 GMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFR 233

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +   L   M++      VV +   +DGLCK G V++A      M   GL PNV  +T+LI
Sbjct: 234 DVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLI 293

Query: 123 DGLCKKNCIERARNLF------------------------------------DEMPKRDM 146
           DGLCK    ERA  LF                                      M ++ +
Sbjct: 294 DGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGL 353

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P+T  YT LIDG+ +  SF  A  L N+M   G   ++  Y +++ G  + G +Q+A  
Sbjct: 354 APNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYK 413

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +      +G+ PD++    L+ +H ++G++  A++L N+M
Sbjct: 414 VLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQM 453



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 120/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K  + K ++  Y  +I G C E K   +++LL  M E GL  NT   TTL+D + + G 
Sbjct: 313 VKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGS 372

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+++M        + T+  +I G CK G +++A          GL P+   YT 
Sbjct: 373 FDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTM 432

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   CK+  I  A +LF++M +    PD   YT +I  Y +    +++  L ++   +G
Sbjct: 433 LITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIG 492

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTS++ G  R G    A  +F  M+  G LPD I   +L+    +   ++EA 
Sbjct: 493 LVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEAR 552

Query: 241 ELQNEMMGRGLL 252
            L   M+ + ++
Sbjct: 553 ALFETMLDKHMV 564



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M GK +K ++  + ++I GLC     E + +L L  +K +    N    T ++  Y K G
Sbjct: 277 MVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEG 336

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           + + A  LL  M++  +     T+  LIDG C+ G    A +   +M   G  PN+  Y 
Sbjct: 337 KLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYN 396

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+I G CKK  I++A  +      + + PD   YT LI  + K      AL+L N+M E 
Sbjct: 397 AIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAEN 456

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
               D++ YT+++    +   +++++ LF + +  G++P +    S++  +   G    A
Sbjct: 457 SCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSA 516

Query: 240 IELQNEMMGRGLL 252
           +++   M+  G L
Sbjct: 517 LKVFERMVQHGCL 529



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 116/294 (39%), Gaps = 44/294 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    ++  Y  II G C + K + +  +L      GL  + V  T L+  + K G 
Sbjct: 383 MKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGH 442

Query: 61  PSEALSLLDEM-------------------------------LDSRIEVTVV----TFCV 85
            + AL L ++M                                D  + + +V    T+  
Sbjct: 443 ITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTS 502

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I G C+ G    A+  F RM   G  P+   Y ALI GLCK++ +E AR LF+ M  + 
Sbjct: 503 MIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKH 562

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT--SLVWGLSRCGHLQE 203
           M+P       L   Y + +    A++  +     G+D    A+   +LV  LS   +L  
Sbjct: 563 MVPCDVTCVTLAYEYCRRDKTTIAVSFLD-----GLDKRQQAHAADALVRKLSAVDNLDA 617

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
           A +    ++ +    D     S +   YE      A E+  ++  R  +SG K 
Sbjct: 618 ASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISKR--ISGFKK 669


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 126/249 (50%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  I+ +   YG +I G C   + E +++LL++M+  G+  N +I  T++D Y + G   
Sbjct: 265 GNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVD 324

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            AL +   M    IE+ V T+  L  GLC+   + EA      M + G+ PN   YT LI
Sbjct: 325 NALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLI 384

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
              CK+  +  AR LF EM  +  +P    Y  ++DGY+K  S +EA   +  M + G+ 
Sbjct: 385 SIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLV 444

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y SLV G    G +  A  LF EM  RG  P+ +   +L+    + G  +EA +L
Sbjct: 445 PDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQL 504

Query: 243 QNEMMGRGL 251
            ++M+  GL
Sbjct: 505 YDDMLKAGL 513



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 131/278 (47%), Gaps = 36/278 (12%)

Query: 11  PLYGTIIW-GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           PL  +++  G C   + +D++ LL EM  +G+  N +   +L+D Y +  + +    LL+
Sbjct: 132 PLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLE 191

Query: 70  EMLDSRIEVTVVTFCVLIDGL-----------------------------------CKSG 94
            M +  IE TV T+ +L+D L                                   C++G
Sbjct: 192 IMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAG 251

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            VR A + F      G+ PN   Y  LI+G CK   +E A  L  +M  R +  +   + 
Sbjct: 252 NVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFN 311

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +IDGY +      AL +K  M ++G++LD+  Y +L  GL R   + EA+ L H MI +
Sbjct: 312 TMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEK 371

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G+ P+ +   +L+  H + G+M EA  L  EM G+G +
Sbjct: 372 GVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAM 409



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 109/212 (51%), Gaps = 4/212 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ D+  Y T+  GLC  ++  ++K LL  M E G+  N V  TTL+  + K G+
Sbjct: 333 MEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGD 392

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM       +VVT+ V++DG  K G +REA  +   M   GL P+V  Y +
Sbjct: 393 MVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYAS 452

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    ++ A  LF+EM  R   P+  AYTALI G  K    +EA  L + M + G
Sbjct: 453 LVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAG 512

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           +  D + Y++LV  L    H    + + H+ I
Sbjct: 513 LTPDDSLYSALVGSL----HTDNRKDIHHKQI 540



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 120/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+A +  Y  ++  L         + ++ EMK   +  +  + T +++AY +AG 
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGN 252

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + DE + + IE    T+ VLI+G CK G +  A      M   G+  N  ++  
Sbjct: 253 VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNT 312

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG C++  ++ A  +   M K  +  D   Y  L  G  +     EA  L + M E G
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKG 372

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   YT+L+    + G + EAR LF EM G+G +P  +    ++  + ++G++ EA 
Sbjct: 373 VPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAE 432

Query: 241 ELQNEMMGRGLL 252
             + EM  +GL+
Sbjct: 433 RFRKEMEKKGLV 444



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 1/195 (0%)

Query: 58  AGEPSEALSLLDEMLDS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           AG+ ++A ++L   L S    V+ +   V++DG CKSG V +A      MP  G+  N  
Sbjct: 109 AGQLADAAAILTRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNAL 168

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y +L+D   ++    R + L + M    +      YT L+D         +   + + M
Sbjct: 169 CYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEM 228

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
               V  D+  YT+++    R G+++ A  +F E +G GI P+E     L+    + G M
Sbjct: 229 KAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQM 288

Query: 237 DEAIELQNEMMGRGL 251
           + A  L  +M GRG+
Sbjct: 289 EAAEMLLADMQGRGV 303


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  133 bits (335), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N + D+ +Y +II  LC + +  ++  L S+M   G++ +    T+L+ +     E
Sbjct: 198 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 257

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL++M++S+I   VV F  ++D LCK G + EA D    M   G+ PNV  Y A
Sbjct: 258 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 317

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A  +FD M      P+  +Y  LI+GY K +   +A  L   M +  
Sbjct: 318 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 377

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +L+ GL   G LQ+A  LFHEM+  G +PD      LL    ++ ++DEA+
Sbjct: 378 LIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 437

Query: 241 ELQNEMMGRGL 251
            L   + G  +
Sbjct: 438 ALLKTIEGSNM 448



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 137/285 (48%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ I  D+  Y ++I  LC   +++    LL++M  + +  + VI +T++DA  K G+
Sbjct: 233 MVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGK 292

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  ++D M+   +E  VVT+  L+DG C    + EA+  F  M   G  PNV  Y  
Sbjct: 293 ITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 352

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +++A  LF+EM ++++IP+T  Y  L+ G       ++A+ L + M   G
Sbjct: 353 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHG 412

Query: 181 -----------------------------------VDLDLNAYTSLVWGLSRCGHLQEAR 205
                                              +D D+  YT ++ G+ R G L+ AR
Sbjct: 413 QIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAAR 472

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +F  +  +G+ P+      ++     RG +DEA +L  EM G G
Sbjct: 473 DIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 517



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 125/248 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++ ++  Y  ++ G C++S+ +++  +   M  NG   N +   TL++ Y K     +
Sbjct: 306 RGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 365

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L +EM    +    VT+  L+ GLC  G +++AI  F  M   G  P++A Y  L+D
Sbjct: 366 ATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLD 425

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCKK+ ++ A  L   +   +M PD   YT +IDG  +    + A ++ + ++  G+  
Sbjct: 426 YLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRP 485

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  YT ++ GL R G L EA  LF EM G G  PD     ++ +   +      AI+L 
Sbjct: 486 NVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLL 545

Query: 244 NEMMGRGL 251
            EM+ RG 
Sbjct: 546 QEMLARGF 553



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 35/280 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D   + T+I GLC+E K  D+  L  +M   G   N V   TL++   K G  + A+
Sbjct: 133 LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 192

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI--- 122
            LL  M     +  VV +  +ID LCK   V EA + F +M   G+ P++  YT+LI   
Sbjct: 193 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 252

Query: 123 --------------------------------DGLCKKNCIERARNLFDEMPKRDMIPDT 150
                                           D LCK+  I  A ++ D M  R + P+ 
Sbjct: 253 CNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNV 312

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y AL+DG+       EA+ + + M   G   ++ +Y +L+ G  +   + +A  LF E
Sbjct: 313 VTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEE 372

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           M  + ++P+ +   +L+      G + +AI L +EM+  G
Sbjct: 373 MCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHG 412



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 124/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+     +I   C  ++   +  +L+++ + GL  +T   TTL+      G+
Sbjct: 93  MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L D+M+    +  VVT+  LI+GLCK G    AI     M      P+V VYT+
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   +  A NLF +M  + + PD   YT+LI        +K    L N+M    
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  ++++V  L + G + EA  +   MI RG+ P+ +   +L+  H  +  MDEA+
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 332

Query: 241 ELQNEMMGRG 250
           ++ + M+  G
Sbjct: 333 KVFDTMVHNG 342



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 108/220 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++M   G+  +      L++++     P  A S+L ++L   ++    TF  LI GLC
Sbjct: 89  LSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLC 148

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + +A+  F +M   G  PNV  Y  LI+GLCK      A  L   M + +  PD  
Sbjct: 149 VEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVV 208

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT++ID   K     EA NL ++M   G+  D+  YTSL+  L      +    L ++M
Sbjct: 209 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 268

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I   I+PD ++  +++    + G + EA ++ + M+ RG+
Sbjct: 269 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV 308



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 90/180 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ GLC   + +D+  L  EM  +G   +      L+D   K     EA++LL  + 
Sbjct: 385 YNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 444

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S ++  +  + ++IDG+C++G +  A D F  +   GL PNV  YT +I+GLC++  ++
Sbjct: 445 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 504

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM      PD   Y  +  G L+++    A+ L   M   G   D++  T LV
Sbjct: 505 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 564



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + + +  L  EM +  L  NTV   TLM      G   +A++L  EM+
Sbjct: 350 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMV 409

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  + T+ +L+D LCK   + EA+     +    + P++ +YT +IDG+C+   +E
Sbjct: 410 AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELE 469

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR++F  +  + + P+   YT +I+G  +     EA  L   M   G   D   Y ++ 
Sbjct: 470 AARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTIT 529

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
            GL +      A  L  EM+ RG   D
Sbjct: 530 QGLLQNKEALRAIQLLQEMLARGFSAD 556



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 92/209 (44%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +TV    L+ +  K  +     SL ++M    I   V T  +LI+  C       A    
Sbjct: 66  STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVL 125

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            ++   GL P+ A +T LI GLC +  I  A +LFD+M      P+   Y  LI+G  K 
Sbjct: 126 AKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKV 185

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
            +   A+ L   M +     D+  YTS++  L +   + EA  LF +M+G+GI PD    
Sbjct: 186 GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTY 245

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            SL+              L N+M+   ++
Sbjct: 246 TSLIHSLCNLCEWKHVTTLLNQMINSKIM 274



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 86/189 (45%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +ALS  + ML      + V F  L+  + K+           +M  FG+ P+V     LI
Sbjct: 50  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 109

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C  N    A ++  ++ K  + PDT  +T LI G        +AL+L ++M   G  
Sbjct: 110 NSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 169

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL + G+   A  L   M      PD ++  S++    +   + EA  L
Sbjct: 170 PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNL 229

Query: 243 QNEMMGRGL 251
            ++M+G+G+
Sbjct: 230 FSKMVGQGI 238



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 70/150 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL  Y  ++  LC +S  +++  LL  ++ + +  +  I T ++D   +AGE   A  + 
Sbjct: 416 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 475

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    +   V T+ ++I+GLC+ GL+ EA   F  M   G  P+   Y  +  GL + 
Sbjct: 476 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 535

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID 158
               RA  L  EM  R    D +  T L++
Sbjct: 536 KEALRAIQLLQEMLARGFSADVSTTTLLVE 565



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/123 (20%), Positives = 52/123 (42%)

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A + F+ M      P T  +  L+    K + +    +L N+M   G+  D+   
Sbjct: 46  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 105

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+           A  +  +++  G+ PD     +L++     G + +A+ L ++M+G
Sbjct: 106 NILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 165

Query: 249 RGL 251
            G 
Sbjct: 166 EGF 168


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/244 (36%), Positives = 127/244 (52%), Gaps = 8/244 (3%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G N K  +  Y  II  LC + + ++++ L  EMK  G+T   +  T+LM          
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------E 286

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA  L +EM++  ++  VVTF VLID LCK G V EA D    M   G+ PN+  Y +LI
Sbjct: 287 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLI 346

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +G C    +  AR LF  MP +   PD   YT LI+GY K    +EA+ L N M +VG  
Sbjct: 347 EGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKR 406

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y +L+ GL + G + +A+ LF  M   GI  D  +    L    + G + EA+EL
Sbjct: 407 PDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMEL 466

Query: 243 QNEM 246
            N++
Sbjct: 467 FNKL 470



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 121/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +L  Y ++I G C+      ++ L   M   G   + +  T L++ Y K  +
Sbjct: 330 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSK 389

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L + ML       V T+  L+ GL + G V +A   FG M  +G+  ++ +Y  
Sbjct: 390 VEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGI 449

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            ++GLCK  C+  A  LF+++   ++  D   +  LIDG  K    + A  L  ++ +  
Sbjct: 450 FLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEE 509

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  ++    R G + +A +LF +M   G  PD+I   +L++  +E   +++ +
Sbjct: 510 LQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVV 569

Query: 241 ELQNEMMGR 249
           EL + M+ R
Sbjct: 570 ELLHMMVQR 578



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 10/243 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +   +  Y +++W        E++K L +EM   G+  N V    L+D   K G+
Sbjct: 268 MKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGK 319

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ M+   I   ++T+  LI+G C  G +  A + F  MP  G  P+V  YT 
Sbjct: 320 VIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTV 379

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK + +E A  L++ M +    PD   Y AL+ G  +     +A  L   M   G
Sbjct: 380 LINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYG 439

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS-LLKKHYERGNMDEA 239
           +  DL  Y   + GL + G L EA  LF+++    I  D I C + L+    + G ++ A
Sbjct: 440 IPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLD-IECFNCLIDGLCKAGKLETA 498

Query: 240 IEL 242
            EL
Sbjct: 499 WEL 501



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 104/216 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + D+  Y  +I G C  SK E++  L + M + G   +      L+   F+ G+
Sbjct: 365 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 424

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L   M    I   +  + + ++GLCK+G + EA++ F ++  + +  ++  +  
Sbjct: 425 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 484

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  LF+++P+ ++ PD   Y  +I  + +     +A  L  +M + G
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
              D   Y +L+ G      L++   L H M+ R +
Sbjct: 545 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDV 580



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 90/180 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  YG ++ GL    K  D+K L   MK  G+  +  I    ++   K G   EA+ 
Sbjct: 406 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 465

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L +++    I++ +  F  LIDGLCK+G +  A + F ++P   L P+V  Y  +I   C
Sbjct: 466 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 525

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +   + +A  LF +M K    PD   Y  LI G+ + +  ++ + L + M +  V LD+N
Sbjct: 526 RGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVN 585



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 14/258 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N    L  +  ++ GL     +     L ++M+ +G++ +      L++       
Sbjct: 87  MMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNR 146

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E L+++  +L       +VT+  LI GLC    + +A   F RM   G  PN   Y  
Sbjct: 147 VGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGT 206

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI------PDTTAYTALIDGYLKHESFKEALNLKN 174
           L+ GLC+   I  A  L  EM     +      P   +Y+ +ID   K     EA +L  
Sbjct: 207 LMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFE 266

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M   G+   + +YTSL+W        +EA+ LF+EM+ +G+ P+ +    L+    + G
Sbjct: 267 EMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEG 318

Query: 235 NMDEAIELQNEMMGRGLL 252
            + EA +L   M+ RG++
Sbjct: 319 KVIEAKDLLEVMIQRGIV 336



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 14/199 (7%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A      M+ S     + +F  L+ GL K     +    + +M   G+ P+      L+
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC  N +     +   + +R  IPD   YT LI G        +A  L  RM ++G  
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG----------ILPDEILCISLLKKHYE 232
            +   Y +L+ GL R G++  A  L  EM+             ++   I+  +L K   E
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 233 RGNMDEAIELQNEMMGRGL 251
               DEA +L  EM  +G+
Sbjct: 259 ----DEARDLFEEMKVQGM 273



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 2/166 (1%)

Query: 91  CKSGLVR--EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           CK+G +   +A  +F  M      P ++ +T L+ GL K     +   L+++M    + P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D      L++         E L +   +   G   D+  YT+L+ GL     + +A +LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             M   G  P+ I   +L+K     GN+  A++L  EM+    L G
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYG 235


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 126/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I GL  + +   +  L  EMK  G   +++  T LMDA  KAG   +AL LL
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM +  ++  VVT+  LI G  K G + EA +    M   G  P+V  Y+ LI GL K 
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKA 302

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A  +  +M K    PDT  Y  LI+G  K     +A  L +RM   G + D+  Y
Sbjct: 303 SQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTY 362

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           ++L+  L +   ++ A VLF EM   GI PD     S++    + G +D+A  L +EM G
Sbjct: 363 STLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRG 422

Query: 249 RGL 251
           +GL
Sbjct: 423 KGL 425



 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +  K D   +  ++  L    + +D+  LL EMKE G+    V    L+  + K G+
Sbjct: 210 MKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGD 269

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +LLDEM  +  +  VVT+  LI GL K+  + EA     +M   G  P+   Y  
Sbjct: 270 LVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNT 329

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GL K   +  A  LFD M  +   PD   Y+ LI    K    + A  L   M  VG
Sbjct: 330 LINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVG 389

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y S++  L + G + +A  LF EM G+G+ PD I   + L      G   EA 
Sbjct: 390 IQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEAR 449

Query: 241 ELQNEMMGRGLL 252
           ++  +M   GLL
Sbjct: 450 KIFEDMKESGLL 461



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 124/242 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +++  L    + E+++LL  E+K    T + V  + L+++  +AG+   AL ++ EM 
Sbjct: 12  YNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQ 71

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +  + T+  L+D L K+G   EA+     M D G  P+V  Y  LI  L K   + 
Sbjct: 72  AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLS 131

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM +R  +PDT  Y +LI G  K    ++A+ L   M   G   D+  Y+SL+
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL + G   +A  LF EM  RG  PD I   +L+    + G +D+A+EL +EM  RG+ 
Sbjct: 192 TGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVK 251

Query: 253 SG 254
            G
Sbjct: 252 PG 253



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 122/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K +L  Y T++  L    +F+++  LL+EM++NG   +      L+    KAG 
Sbjct: 70  MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA +L  EM +        T+  LI GL K G  ++A++    M   G  P+V  Y++
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL K     +A  LF EM +R   PD+  +TAL+D   K     +AL L + M E G
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V   +  Y +L+ G  + G L EA  L  EM   G  PD +    L+    +   +DEA 
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309

Query: 241 ELQNEMMGRG 250
           ++  +M   G
Sbjct: 310 QVLKKMEKEG 319



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    D   Y ++I+GL    + + +  LL EM+ +G   + +  ++L+    K GE
Sbjct: 140 MRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  EM     +   +TF  L+D L K+G V +A++    M + G+ P V  Y A
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K   +  A NL DEM +    PD   Y+ LI G +K     EA  +  +M + G
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +L+ GL + G L +A  LF  M  +G  PD +   +L+    +   ++ A 
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 380 VLFEEMESVGI 390



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 124/257 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    K D+  Y  +I GL   S+ +++  +L +M++ G   +T+   TL++   KAG 
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L D M        VVT+  LI  L K+  V  A   F  M   G+ P++  Y +
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L K   ++ A  LF EM  + + PD   Y A ++   +   FKEA  +   M E G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y +L+ GLS+   + +A  L  E+I +G   D +     L+     GN+DEA 
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAH 519

Query: 241 ELQNEMMGRGLLSGSKN 257
           EL      +GL  G+ +
Sbjct: 520 ELLQFANSKGLWPGASS 536



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +K  +  Y  +I G        ++  LL EMK NG   + V  + L+    KA +
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L +M         +T+  LI+GL K+GL+ +A   F RM   G +P+V  Y+ 
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYST 364

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L K   +E A  LF+EM    + PD   Y ++I    K     +A  L + M   G
Sbjct: 365 LITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG 424

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y + +  L R G  +EAR +F +M   G+LPD     +LL    +   +D+A 
Sbjct: 425 LSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDAC 484

Query: 241 ELQNEMMGRG 250
            L  E++ +G
Sbjct: 485 GLLKELIEQG 494



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 116/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      D+  Y  +I  L    +  ++  L +EM+E G   +T    +L+    K G 
Sbjct: 105 MRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGR 164

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL+EM        V+T+  LI GL K G   +A   F  M   G  P+   +TA
Sbjct: 165 SQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTA 224

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D L K   ++ A  L DEM +R + P    Y ALI G+ K     EA NL + M   G
Sbjct: 225 LMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG 284

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y+ L+ GL +   L EA  +  +M   G  PD I   +L+    + G +++A 
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAG 344

Query: 241 ELQNEMMGRG 250
            L + M  +G
Sbjct: 345 RLFDRMKSKG 354



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 118/250 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K      D+  Y  +I  L    K+E +  +++EM+  G   N     TL+D   KAG+
Sbjct: 35  LKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQ 94

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL EM D+     V T+  LI  L K+G + EA   F  M + G  P+   Y +
Sbjct: 95  FDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNS 154

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL K    ++A  L +EM +    PD   Y++LI G  K     +A  L   M   G
Sbjct: 155 LIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRG 214

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   +T+L+  L + G + +A  L  EM  RG+ P  +   +L+    + G++ EA 
Sbjct: 215 RKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAY 274

Query: 241 ELQNEMMGRG 250
            L +EM   G
Sbjct: 275 NLLDEMKRNG 284



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 120/286 (41%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    D   Y T+I GL       D+  L   MK  G   + V  +TL+ A  KA  
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L +EM    I+  + T+C +I  L K+G V +A   F  M   GL P+V  Y A
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            ++ L +    + AR +F++M +  ++PD   Y AL+ G  K +   +A  L   + E G
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494

Query: 181 VDLD-----------------------------------LNAYTSLVWGLSRCGHLQEAR 205
              D                                    ++Y +L+  L++ G + EA 
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAF 554

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               ++  +G  PD +   SL+    + G +D A EL  EM  RGL
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 96/209 (45%)

Query: 42  TANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           + N V   +L++A  KAG+  EA  L +E+  ++    VV++  LI+ L ++G    A++
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
               M   G  PN+  Y  L+D L K    + A  L  EM     +PD   Y  LI    
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           K     EA  L   M E G   D   Y SL++GL + G  Q+A  L  EM   G  PD +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRG 250
              SL+    + G   +A +L  EM  RG
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRG 214



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 5/199 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+GK +  D+  Y   +  L    +F++++ +  +MKE+GL  +      L+    K  E
Sbjct: 420 MRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKE 479

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL E+++       + F   ++ L   G V EA +        GL P  + Y A
Sbjct: 480 VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNA 539

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID L K   +  A N  +++ ++   PD  +Y++LI    +      A  L   M++ G
Sbjct: 540 LIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599

Query: 181 VDLDLNAYTSLV-----WG 194
           + L   +Y++LV     WG
Sbjct: 600 LKLSPRSYSNLVRKLQDWG 618


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 4/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N+KAD+  Y TII  LC +   + +  L  EM+  G+ ++ V   +L+    KAG+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++   LL +M+   I   V+TF VL+D   K G ++EA + +  M   G+ PN+  Y  
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C +N +  A N+ D M +    PD   +T+LI GY   +   + + +   +++ G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y+ LV G  + G ++ A  LF EM+  G+LPD +    LL    + G +++A+
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458

Query: 241 E----LQNEMMGRGLL 252
           E    LQ   M  G++
Sbjct: 459 EIFEDLQKSKMDLGIV 474



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 122/247 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   + T+I GLC+E K   + +L+  M ENG   + V   ++++   ++G+ S A  +L
Sbjct: 157 DTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDML 216

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M +  ++  V T+  +ID LC+ G +  AI  F  M   G+  +V  Y +L+ GLCK 
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                   L  +M  R+++P+   +  L+D ++K    +EA  L   M   G+  ++  Y
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G      L EA  +   M+     PD +   SL+K +     +D+ +++   +  
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396

Query: 249 RGLLSGS 255
           RGL++ +
Sbjct: 397 RGLVANA 403



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T++ G C++++  ++  +L  M  N  + + V  T+L+  Y     
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + +   +    +    VT+ +L+ G C+SG ++ A + F  M   G+ P+V  Y  
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +E+A  +F+++ K  M      YT +I+G  K    ++A NL   +   G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YT ++ GL + G L EA +L  +M   G  P++    +L++ H   G++  + 
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563

Query: 241 ELQNEMMGRGL 251
           +L  EM   G 
Sbjct: 564 KLIEEMKSCGF 574



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLS-------------------------- 34
           M+ K IK+ +  Y +++ GLC   K+ D  LLL                           
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313

Query: 35  ---------EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                    EM   G++ N +   TLMD Y      SEA ++LD M+ ++    +VTF  
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G C    V + +  F  +   GL  N   Y+ L+ G C+   I+ A  LF EM    
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++PD   Y  L+DG   +   ++AL +   + +  +DL +  YT+++ G+ + G +++A 
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            LF  +  +G+ P+ +    ++    ++G++ EA  L  +M
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 109/217 (50%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +++ NG+  N      +++ + +  +   A S+L +++    E    TF  LI+GLC  G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEG 172

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            V +A+    RM + G  P++  Y ++++G+C+      A ++  +M +R++  D   Y+
Sbjct: 173 KVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYS 232

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +ID   +      A++L   M   G+   +  Y SLV GL + G   +  +L  +M+ R
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            I+P+ I    LL    + G + EA EL  EM+ RG+
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 106/211 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + ++I G C+  + +D   +   + + GL AN V  + L+  + ++G+   A  L 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   +   V+T+ +L+DGLC +G + +A++ F  +    +   + +YT +I+G+CK 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A NLF  +P + + P+   YT +I G  K  S  EA  L  +M E G   +   Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            +L+    R G L  +  L  EM   G   D
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 112/219 (51%), Gaps = 2/219 (0%)

Query: 21  CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           C ++ F  S  +L ++ + G   +T    TL++     G+ S+A+ L+D M+++  +  +
Sbjct: 136 CCKTCFAYS--VLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDM 193

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           VT+  +++G+C+SG    A D   +M +  +  +V  Y+ +ID LC+  CI+ A +LF E
Sbjct: 194 VTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M  + +      Y +L+ G  K   + +   L   M    +  ++  +  L+    + G 
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           LQEA  L+ EMI RGI P+ I   +L+  +  +  + EA
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 91/184 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + + A+   Y  ++ G C   K + ++ L  EM  +G+  + +    L+D     G+  +
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL + +++  S++++ +V +  +I+G+CK G V +A + F  +P  G+ PNV  YT +I 
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCKK  +  A  L  +M +    P+   Y  LI  +L+      +  L   M   G   
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576

Query: 184 DLNA 187
           D ++
Sbjct: 577 DASS 580



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 4/194 (2%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A++L  EM+ SR    +V F      + ++      +D+  ++   G+  N+     +I
Sbjct: 71  DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 123 DGLCK--KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +  C+  K C   A ++  ++ K    PDTT +  LI+G        +A+ L +RM E G
Sbjct: 131 NCFCRCCKTCF--AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENG 188

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y S+V G+ R G    A  +  +M  R +  D     +++      G +D AI
Sbjct: 189 CQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 241 ELQNEMMGRGLLSG 254
            L  EM  +G+ S 
Sbjct: 249 SLFKEMETKGIKSS 262



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 81/172 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  YG ++ GLC   K E +  +  +++++ +    V+ TT+++   K G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L   +    ++  V+T+ V+I GLCK G + EA     +M + G  PN   Y  
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           LI    +   +  +  L +EM       D ++   +ID  L  E  K  L++
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 600


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  133 bits (334), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 127/238 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ G       ++   L + M+ +G+  +    + L++   K     EA  L  EML
Sbjct: 174 FNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEML 233

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+ +    VTF  LIDG CK+G +  A+D + +M + G  P+V  Y  LI GLCKK  ++
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLK 293

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +AR L DEM ++ + PD   YT LIDG  K    + A  L+ RM +  + LD   YT+L+
Sbjct: 294 QARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALI 353

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +GL + G   +A  +  EM+  G+ PD+     ++ +  ++G++ +A EL  EM   G
Sbjct: 354 FGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNG 411



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G  A+      LM  + K GE   A S+ D + 
Sbjct: 116 YFKLVWGF------------YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM    ++P+   +T LIDG+ K+     A+++  +M   G   D+  Y +L+
Sbjct: 224 EANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++AR L  EM  +G+ PD+I   +L+    + G+++ A EL+  M+
Sbjct: 284 YGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMI 338



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 111/218 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ES+ +++  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML+      VVT+  LI GLCK G +++A      M   GL P+   YT 
Sbjct: 257 LDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A  L + M K  +  D   YTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D   YT ++    + G +++A  L  EM   G +P
Sbjct: 377 LKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVP 414



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 122/265 (46%), Gaps = 18/265 (6%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEM--KENGLTANTV---------------- 46
            ++  L  Y T+I  LC    F ++K L+  +  ++   +A+ V                
Sbjct: 8   TVRHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSDIY 67

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           + + L+ AY ++G   +A+            V   T   +++ L K    +    ++  +
Sbjct: 68  VFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEI 127

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            + G   ++  +  L+   CK+  +  A+++FD + K  + P   ++  L++GY+K    
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
            E   LKN M   GV  D+  Y+ L+ GL +   + EA  LF EM+  G++P+ +   +L
Sbjct: 188 DEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTL 247

Query: 227 LKKHYERGNMDEAIELQNEMMGRGL 251
           +  H + G +D A+++  +M+ +G 
Sbjct: 248 IDGHCKNGRLDLAMDIYRQMLNQGF 272


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 120/242 (49%), Gaps = 22/242 (9%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  Y  ++ GLC E K  +++ +L  M++ G+ AN ++ TTL+  +F    
Sbjct: 354 MVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKN 413

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL LL EM +  +E+ +  +  LI GLC    + EA     +M + GL PN  +YT 
Sbjct: 414 SEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTT 473

Query: 121 LIDGLCKKN----------------------CIERARNLFDEMPKRDMIPDTTAYTALID 158
           ++D   K                        C+  A  LF+EM  + M  D   YTAL+D
Sbjct: 474 MMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLD 533

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           GYLK  +  +A  LK +M + G+ LDL  YT  + G      + EAR +F EMIG GI P
Sbjct: 534 GYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAP 593

Query: 219 DE 220
           D 
Sbjct: 594 DR 595



 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 122/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC E +  +++ L S MKE G   + V   +L+D Y K GE  E   L++EM 
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S  +  VVT+  LI+  CK G +  A  YF  M   G+  NV  ++  +D  CK+  + 
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M  R M  +   YT LIDG  K     +A+ L + M   GV L++  YT LV
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +   + EA  +   M   G+  +E+L  +L+  H+   N ++A+ L +EM  +GL
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    KAD+  Y  +I   C   + E +    + MK  G+ AN V  +T +DA+ K G 
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  +M    + +   T+  LIDG CK+G + +AI     M   G+  NV  YT 
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK+  +  A ++   M K  +  +   YT LI G+  +++ ++AL L + M   G
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++LD++ Y +L+ GL     L EA+ L  +M   G+ P+ I+  +++   ++ G + EAI
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 241 ELQNEMMGRGL 251
            +  +++  G 
Sbjct: 489 AMLQKILDSGF 499



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 22/273 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + + A++  + T +   C E    ++  L ++M+  G+  N    T L+D   KAG 
Sbjct: 284 MKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGR 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LLDEM+   + + VVT+ VL+DGLCK   V EA D    M   G+  N  +YT 
Sbjct: 344 LDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTT 403

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G       E+A  L  EM  + +  D + Y ALI G        EA +L  +M E G
Sbjct: 404 LIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG 463

Query: 181 VDLDLNAYTSLVWGLSRCGH----------------------LQEARVLFHEMIGRGILP 218
           ++ +   YT+++    + G                       L EA  LF+EM+ +G+  
Sbjct: 464 LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSL 523

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           D+++  +LL  + ++GN+ +A  L+ +M+  GL
Sbjct: 524 DKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 556



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 22/179 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K ++ D+ LYG +I GLC   K +++K LL++M E+GL  N +I TT+MDA FK+G+
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 61  PSEALSLLDEMLDSRIE----------------------VTVVTFCVLIDGLCKSGLVRE 98
             EA+++L ++LDS  +                      +  V +  L+DG  K G + +
Sbjct: 484 VPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 543

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           A     +M D GL  ++  YT  I G C  N +  AR +F EM    + PD   Y  LI
Sbjct: 544 AFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 602



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 87/172 (50%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V TF ++ID LCK G + EA   F RM + G  P+V  + +LIDG  K   ++    L +
Sbjct: 188 VFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVE 247

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM +     D   Y ALI+ + K    + A      M   GV  ++  +++ V    + G
Sbjct: 248 EMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEG 307

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++EA  LF +M  RG+  +E     L+    + G +D+AI L +EM+ +G+
Sbjct: 308 LVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 83/200 (41%), Gaps = 10/200 (5%)

Query: 60  EPSEALSLLDEM------LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
            P  A SL+D +      L  R          L+  L   GL+ +A+    R+ +  + P
Sbjct: 96  RPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVRAVARVRELRVPP 155

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           N      ++  L +       R LF+++P     P+   +  +ID   K     EA +L 
Sbjct: 156 NTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELAEARSLF 211

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
           +RM E+G   D+  + SL+ G  +CG L E   L  EM   G   D +   +L+    + 
Sbjct: 212 SRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKF 271

Query: 234 GNMDEAIELQNEMMGRGLLS 253
           G M+ A      M   G+++
Sbjct: 272 GRMETAYGYFAAMKREGVMA 291


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 125/251 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++  +  + T+I G C     E+   L   M+   +  +    + L++   K G   E
Sbjct: 171 RGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDE 230

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              L DEM    +    VTF VLIDG CK G V  A+  F  M   G+ P++  Y ALI+
Sbjct: 231 GSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALIN 290

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   ++ AR L +EM    + PD   +T LIDG  K+   + AL +K RM E G++L
Sbjct: 291 GLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIEL 350

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D  A+T L+ GL R G + +A  +  +M+  G  PD+     ++    ++GN+    +L 
Sbjct: 351 DDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLL 410

Query: 244 NEMMGRGLLSG 254
            EM   G + G
Sbjct: 411 KEMQSDGHVPG 421



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 116/227 (51%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + E S     E+ ++G   N      LM  + K G    A  + DE+    +  TVV+F 
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            LI G CK+G V E     G M    + P+V  ++ALI+GLCK+  ++    LFDEM  +
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            ++P+   +T LIDG  K      AL     M   GV  DL  Y +L+ GL + G L+EA
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           R L +EM   G+ PD I   +L+    + G+M+ A+E++  M+  G+
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGI 348



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 3/219 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ DL  Y  +I GLC     ++++ L++EM  +GL  + +  TTL+D   K G+
Sbjct: 273 MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGD 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +   M++  IE+  V F VLI GLC+ G V +A      M   G  P+   YT 
Sbjct: 333 MESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTM 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D  CKK  +     L  EM     +P    Y AL++G  K    K A  L + M  VG
Sbjct: 393 VVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVG 452

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  +   Y  L+ G S+ G   +  +   E   +G++ D
Sbjct: 453 VAPNDITYNILLEGHSKHGSSVDVDIFNSE---KGLVKD 488



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 115/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D+  +  +I GLC E + ++  LL  EM   GL  N V  T L+D   K G+
Sbjct: 203 MESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGK 262

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL     ML   +   +VT+  LI+GLCK G ++EA      M   GL P+   +T 
Sbjct: 263 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTT 322

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +E A  +   M +  +  D  A+T LI G  +     +A  +   M   G
Sbjct: 323 LIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAG 382

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   YT +V    + G++     L  EM   G +P  +   +L+    ++G +  A 
Sbjct: 383 FKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAK 442

Query: 241 ELQNEMMGRGL 251
            L + M+  G+
Sbjct: 443 MLLDAMLNVGV 453


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 4/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N+KAD+  Y TII  LC +   + +  L  EM+  G+ ++ V   +L+    KAG+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++   LL +M+   I   V+TF VL+D   K G ++EA + +  M   G+ PN+  Y  
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C +N +  A N+ D M +    PD   +T+LI GY   +   + + +   +++ G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y+ LV G  + G ++ A  LF EM+  G+LPD +    LL    + G +++A+
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458

Query: 241 E----LQNEMMGRGLL 252
           E    LQ   M  G++
Sbjct: 459 EIFEDLQKSKMDLGIV 474



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 123/247 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   + T+I GL +E K  ++ +L+  M ENG   + V   ++++   ++G+ S AL LL
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M +  ++  V T+  +ID LC+ G +  AI  F  M   G+  +V  Y +L+ GLCK 
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                   L  +M  R+++P+   +  L+D ++K    +EA  L   M   G+  ++  Y
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G      L EA  +   M+     PD +   SL+K +     +D+ +++   +  
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396

Query: 249 RGLLSGS 255
           RGL++ +
Sbjct: 397 RGLVANA 403



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T++ G C++++  ++  +L  M  N  + + V  T+L+  Y     
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + +   +    +    VT+ +L+ G C+SG ++ A + F  M   G+ P+V  Y  
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +E+A  +F+++ K  M      YT +I+G  K    ++A NL   +   G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YT ++ GL + G L EA +L  +M   G  P++    +L++ H   G++  + 
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563

Query: 241 ELQNEMMGRGL 251
           +L  EM   G 
Sbjct: 564 KLIEEMKSCGF 574



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLS-------------------------- 34
           M+ K IK+ +  Y +++ GLC   K+ D  LLL                           
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313

Query: 35  ---------EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                    EM   G++ N +   TLMD Y      SEA ++LD M+ ++    +VTF  
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G C    V + +  F  +   GL  N   Y+ L+ G C+   I+ A  LF EM    
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++PD   Y  L+DG   +   ++AL +   + +  +DL +  YT+++ G+ + G +++A 
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            LF  +  +G+ P+ +    ++    ++G++ EA  L  +M
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 107/217 (49%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +++ NG+  N      +++ + +  +   A S+L +++    E    TF  LI GL   G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            V EA+    RM + G  P+V  Y ++++G+C+      A +L  +M +R++  D   Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +ID   +      A++L   M   G+   +  Y SLV GL + G   +  +L  +M+ R
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            I+P+ I    LL    + G + EA EL  EM+ RG+
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 106/211 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + ++I G C+  + +D   +   + + GL AN V  + L+  + ++G+   A  L 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   +   V+T+ +L+DGLC +G + +A++ F  +    +   + +YT +I+G+CK 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A NLF  +P + + P+   YT +I G  K  S  EA  L  +M E G   +   Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            +L+    R G L  +  L  EM   G   D
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 2/219 (0%)

Query: 21  CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           C ++ F  S  +L ++ + G   +T    TL+   F  G+ SEA+ L+D M+++  +  V
Sbjct: 136 CCKTCFAYS--VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           VT+  +++G+C+SG    A+D   +M +  +  +V  Y+ +ID LC+  CI+ A +LF E
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M  + +      Y +L+ G  K   + +   L   M    +  ++  +  L+    + G 
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           LQEA  L+ EMI RGI P+ I   +L+  +  +  + EA
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 91/184 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + + A+   Y  ++ G C   K + ++ L  EM  +G+  + +    L+D     G+  +
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL + +++  S++++ +V +  +I+G+CK G V +A + F  +P  G+ PNV  YT +I 
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCKK  +  A  L  +M +    P+   Y  LI  +L+      +  L   M   G   
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576

Query: 184 DLNA 187
           D ++
Sbjct: 577 DASS 580



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 4/194 (2%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A++L  EM+ SR   ++V F      + ++      +D+  ++   G+  N+     +I
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 123 DGLCK--KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +  C+  K C   A ++  ++ K    PDTT +  LI G        EA+ L +RM E G
Sbjct: 131 NCFCRCCKTCF--AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y S+V G+ R G    A  L  +M  R +  D     +++      G +D AI
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 241 ELQNEMMGRGLLSG 254
            L  EM  +G+ S 
Sbjct: 249 SLFKEMETKGIKSS 262



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 81/172 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  YG ++ GLC   K E +  +  +++++ +    V+ TT+++   K G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L   +    ++  V+T+ V+I GLCK G + EA     +M + G  PN   Y  
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           LI    +   +  +  L +EM       D ++   +ID  L  E  K  L++
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 600


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  133 bits (334), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 4/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N+KAD+  Y TII  LC +   + +  L  EM+  G+ ++ V   +L+    KAG+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++   LL +M+   I   V+TF VL+D   K G ++EA + +  M   G+ PN+  Y  
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C +N +  A N+ D M +    PD   +T+LI GY   +   + + +   +++ G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y+ LV G  + G ++ A  LF EM+  G+LPD +    LL    + G +++A+
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458

Query: 241 E----LQNEMMGRGLL 252
           E    LQ   M  G++
Sbjct: 459 EIFEDLQKSKMDLGIV 474



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 123/247 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   + T+I GL +E K  ++ +L+  M ENG   + V   ++++   ++G+ S AL LL
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M +  ++  V T+  +ID LC+ G +  AI  F  M   G+  +V  Y +L+ GLCK 
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                   L  +M  R+++P+   +  L+D ++K    +EA  L   M   G+  ++  Y
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G      L EA  +   M+     PD +   SL+K +     +D+ +++   +  
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396

Query: 249 RGLLSGS 255
           RGL++ +
Sbjct: 397 RGLVANA 403



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T++ G C++++  ++  +L  M  N  + + V  T+L+  Y     
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + +   +    +    VT+ +L+ G C+SG ++ A + F  M   G+ P+V  Y  
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +E+A  +F+++ K  M      YT +I+G  K    ++A NL   +   G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YT ++ GL + G L EA +L  +M   G  P++    +L++ H   G++  + 
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563

Query: 241 ELQNEMMGRGL 251
           +L  EM   G 
Sbjct: 564 KLIEEMKSCGF 574



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLS-------------------------- 34
           M+ K IK+ +  Y +++ GLC   K+ D  LLL                           
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313

Query: 35  ---------EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                    EM   G++ N +   TLMD Y      SEA ++LD M+ ++    +VTF  
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G C    V + +  F  +   GL  N   Y+ L+ G C+   I+ A  LF EM    
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++PD   Y  L+DG   +   ++AL +   + +  +DL +  YT+++ G+ + G +++A 
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            LF  +  +G+ P+ +    ++    ++G++ EA  L  +M
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 107/217 (49%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +++ NG+  N      +++ + +  +   A S+L +++    E    TF  LI GL   G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            V EA+    RM + G  P+V  Y ++++G+C+      A +L  +M +R++  D   Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +ID   +      A++L   M   G+   +  Y SLV GL + G   +  +L  +M+ R
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            I+P+ I    LL    + G + EA EL  EM+ RG+
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 106/211 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + ++I G C+  + +D   +   + + GL AN V  + L+  + ++G+   A  L 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   +   V+T+ +L+DGLC +G + +A++ F  +    +   + +YT +I+G+CK 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A NLF  +P + + P+   YT +I G  K  S  EA  L  +M E G   +   Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            +L+    R G L  +  L  EM   G   D
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 2/219 (0%)

Query: 21  CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           C ++ F  S  +L ++ + G   +T    TL+   F  G+ SEA+ L+D M+++  +  V
Sbjct: 136 CCKTCFAYS--VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           VT+  +++G+C+SG    A+D   +M +  +  +V  Y+ +ID LC+  CI+ A +LF E
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M  + +      Y +L+ G  K   + +   L   M    +  ++  +  L+    + G 
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           LQEA  L+ EMI RGI P+ I   +L+  +  +  + EA
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 91/184 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + + A+   Y  ++ G C   K + ++ L  EM  +G+  + +    L+D     G+  +
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL + +++  S++++ +V +  +I+G+CK G V +A + F  +P  G+ PNV  YT +I 
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCKK  +  A  L  +M +    P+   Y  LI  +L+      +  L   M   G   
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576

Query: 184 DLNA 187
           D ++
Sbjct: 577 DASS 580



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 4/194 (2%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A++L  EM+ SR   ++V F      + ++      +D+  ++   G+  N+     +I
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130

Query: 123 DGLCK--KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +  C+  K C   A ++  ++ K    PDTT +  LI G        EA+ L +RM E G
Sbjct: 131 NCFCRCCKTCF--AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y S+V G+ R G    A  L  +M  R +  D     +++      G +D AI
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248

Query: 241 ELQNEMMGRGLLSG 254
            L  EM  +G+ S 
Sbjct: 249 SLFKEMETKGIKSS 262



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 76/161 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  YG ++ GLC   K E +  +  +++++ +    V+ TT+++   K G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L   +    ++  V+T+ V+I GLCK G + EA     +M + G  PN   Y  
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
           LI    +   +  +  L +EM       D ++   +ID  L
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 134/281 (47%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDA----------- 54
           +  +L +Y ++I  LC   K E+++LL S M E GL  N V  T L+D            
Sbjct: 361 VVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAF 420

Query: 55  -YF-----------------------KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
            YF                       K G+   A  L  EM+D  ++ TV T+  LI G 
Sbjct: 421 YYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGY 480

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           CK GLV +A   +  M   G+ PN   +TALI GLC+ N +  A  LFDEM +  ++P+ 
Sbjct: 481 CKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNE 540

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LI+G+ +  +   A  L + M + G+  D   Y  L+ GL   G + EA+   ++
Sbjct: 541 VTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFIND 600

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  +    DE+   +LL+   + G + EA+  + EM+GRGL
Sbjct: 601 LHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGL 641



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 35/283 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +KADL  Y T++ GLC   +FE    ++ EM E G   +    + L++   K G    
Sbjct: 289 KGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEG 348

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+++    +   +  +  +I+ LCK+G + EA   F  M + GL+PN   YT LID
Sbjct: 349 AFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILID 408

Query: 124 GL-----------------------------------CKKNCIERARNLFDEMPKRDMIP 148
           G                                    CK   ++ A  LF EM  + + P
Sbjct: 409 GFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKP 468

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
               YT+LI GY K     +A  L + MT  G+  +   +T+L+ GL +   + EA  LF
Sbjct: 469 TVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLF 528

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM+   ILP+E+    L++ H   GN   A EL +EM+ +GL
Sbjct: 529 DEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGL 571



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 123/258 (47%), Gaps = 7/258 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K  +  Y ++I G C +     +  L  EM   G+  NTV  T L+    +  +
Sbjct: 461 MVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINK 520

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L DEM++ +I    VT+ VLI+G C+ G    A +    M   GL P+   Y  
Sbjct: 521 MAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRP 580

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    +  A+   +++  +    D   YTAL+ G+ K    KEAL  +  M   G
Sbjct: 581 LIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRG 640

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF---HEMIGRGILPDEILCISLLKKHYERGNMD 237
           + +DL +Y  L+ G       Q  R+LF    EM G+G+ PD ++   L+    + GN+ 
Sbjct: 641 LQMDLVSYAVLISGALN----QNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLK 696

Query: 238 EAIELQNEMMGRGLLSGS 255
           +A E    M+G G +  S
Sbjct: 697 KAFEFWYIMIGEGYVPNS 714



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 127/281 (45%), Gaps = 34/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I  +   +  +I GLC  +K  ++  L  EM E  +  N V    L++ + + G 
Sbjct: 496 MTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGN 555

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  LLDEM+   +     T+  LI GLC +G V EA ++   +       +   YTA
Sbjct: 556 TTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTA 615

Query: 121 LIDGLCKKNCIERA-------------------------------RNLFD---EMPKRDM 146
           L+ G CK+  I+ A                               R LF+   EM  + M
Sbjct: 616 LLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGM 675

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            PD   YT LIDG++K  + K+A      M   G   +   YT+LV GL + G++ EA++
Sbjct: 676 QPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKL 735

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           LF  M+    +P+ I     L    + GNM+ A++L N M+
Sbjct: 736 LFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML 776



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 124/250 (49%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G      +  Y   I GLC   +  ++  +   + E GL A+ V   TL+    +  E 
Sbjct: 252 EGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEF 311

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
              + ++DEM++     +      LI+GL K G +  A +   ++   G+ PN+ VY ++
Sbjct: 312 EVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSM 371

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+ LCK   +E A  LF  M +R + P+   YT LIDG+ +      A    N+M E G+
Sbjct: 372 INSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGI 431

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
              + +Y S++    + G ++ A +LF EM+ +G+ P      SL+  + + G + +A +
Sbjct: 432 SATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFK 491

Query: 242 LQNEMMGRGL 251
           L +EM G+G+
Sbjct: 492 LYHEMTGKGI 501



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 2/248 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K+ + D   Y  ++ G C E + +++ +   EM   GL  + V    L+       +   
Sbjct: 604 KHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRI- 662

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              LL EM    ++   V + +LIDG  KSG +++A +++  M   G  PN   YTAL++
Sbjct: 663 LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVN 722

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K   +  A+ LF  M   + IP+   Y   +D   K  + + AL L N M + G   
Sbjct: 723 GLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFA 781

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y  L+ G  + G  QEA  L   MIG G++PD I   + + ++ +RGN+D A+++ 
Sbjct: 782 NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMW 841

Query: 244 NEMMGRGL 251
             M+ RGL
Sbjct: 842 ECMLQRGL 849



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 8/254 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESK---FEDSKLLLSEMKENGLTANTVICTTLMDAYFK 57
           M G+ ++ DL  Y  +I G   ++    FE    LL EM   G+  + VI T L+D + K
Sbjct: 636 MVGRGLQMDLVSYAVLISGALNQNDRILFE----LLREMHGKGMQPDNVIYTILIDGFIK 691

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
           +G   +A      M+        VT+  L++GL K+G V EA   F RM      PN   
Sbjct: 692 SGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHIT 751

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y   +D L K+  +E A  L + M +     +T  Y  LI GY +   F+EA  L + M 
Sbjct: 752 YGCFLDHLTKEGNMENALQLHNAMLQGS-FANTVTYNILIRGYCQIGKFQEAAKLLDVMI 810

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
            +G+  D   Y++ ++   + G++  A  ++  M+ RG+ PD ++   L+      G +D
Sbjct: 811 GIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELD 870

Query: 238 EAIELQNEMMGRGL 251
            A++L+N+MM RGL
Sbjct: 871 RALQLRNDMMLRGL 884



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 116/227 (51%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           KF     L   +   G+  +  I T ++    +  + ++A  ++++   +   +++VT+ 
Sbjct: 205 KFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYN 264

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V I+GLCKS  V EA++    + + GL  ++  Y  L+ GLC+    E    + DEM + 
Sbjct: 265 VFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIEL 324

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
             +P   A + LI+G +K  S + A  L N++ ++GV  +L  Y S++  L + G L+EA
Sbjct: 325 GYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEA 384

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +LF  M  RG+ P+++    L+     R  +D A    N+M+  G+
Sbjct: 385 ELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGI 431



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 100/239 (41%), Gaps = 1/239 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK ++ D  +Y  +I G       + +      M   G   N+V  T L++  FKAG 
Sbjct: 670 MHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGY 729

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L   ML        +T+   +D L K G +  A+     M   G   N   Y  
Sbjct: 730 VNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNI 788

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+    + A  L D M    M+PD   Y+  I  Y K  +   A+++   M + G
Sbjct: 789 LIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRG 848

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           +  D   +  L+      G L  A  L ++M+ RG+ P +    SL+ +  +R  + + 
Sbjct: 849 LKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 94/202 (46%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+  Y +     + + +++ M D  +   V T   L++ L +    R+ ++ F  + + G
Sbjct: 161 LIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAG 220

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+  +YT ++  LC+     +A+ + ++            Y   I+G  K +   EA+
Sbjct: 221 VKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAV 280

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            +K  + E G+  DL  Y +LV GL R    +    +  EMI  G +P E     L++  
Sbjct: 281 EVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGL 340

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
            + G+++ A EL N++   G++
Sbjct: 341 IKMGSIEGAFELLNKVGKLGVV 362



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 1/205 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+    +   Y  ++ GL       ++KLL   M       N +     +D   K G 
Sbjct: 705 MIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGN 764

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L + ML      TV T+ +LI G C+ G  +EA      M   G+ P+   Y+ 
Sbjct: 765 MENALQLHNAMLQGSFANTV-TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYST 823

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I   CK+  ++ A ++++ M +R + PD   +  LI     +     AL L+N M   G
Sbjct: 824 FIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRG 883

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEAR 205
           +    + Y SL+  L++   L + +
Sbjct: 884 LKPTQSTYHSLMVQLAQRARLTQVQ 908



 Score = 41.2 bits (95), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 19/183 (10%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNL------- 137
           VLI  L  S L     ++ G   +F  H + A +  LI  L + N    A +L       
Sbjct: 75  VLIRTLDDSRLALRFFNFLGLHRNF--HHSTASFCILIHSLLQNNLFWPASSLLQTLLLR 132

Query: 138 ----------FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
                     F E  K+     ++ +  LI  Y++++   + + + N M + G+  ++  
Sbjct: 133 GLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRT 192

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            ++L+  L+R    ++   LF  ++  G+ PD  +   ++K   E  + ++A E+ N+  
Sbjct: 193 LSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAE 252

Query: 248 GRG 250
           G G
Sbjct: 253 GNG 255


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 125/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K++  D+  Y T+I GLC   K +++  LL EM+  G   N+V CTTLMD   K G 
Sbjct: 24  MGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGR 83

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL+ M     +  VV +  LI G C +G +    + F  M   G+  NV  Y+ 
Sbjct: 84  MDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 143

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+    + A  + + M +  + PD   YT LIDG  K      A++L N M E G
Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +     Y  L+ GL + G + +A  +   MI +G   D +   +L+K   ++G +DEA+
Sbjct: 204 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 263

Query: 241 ELQNEM 246
           +L N M
Sbjct: 264 KLFNSM 269



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 123/238 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC E +   +  +  +M + G   N V    L+    KAG+  EA+ L  ++L
Sbjct: 283 FNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVL 342

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D        T+ +LIDG CK  ++  A   F  M   GL+P +  Y  L+  LCK+  +E
Sbjct: 343 DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 402

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A++LF EM   +  PD  ++  +IDG LK   F+    L+ +M E+G+  D   +++L+
Sbjct: 403 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 462

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             LS+ G L EA+     M+  G  PD ++  SLLK    +G+  E I L ++M  +G
Sbjct: 463 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 520



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 124/257 (48%), Gaps = 2/257 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K   AD+ LYGT+I G C     +  K L  EM   G++AN V  + L+    + G+
Sbjct: 94  MKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 153

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L+ M +  I   VVT+  LIDGLCK G    A+D    M + G  P+   Y  
Sbjct: 154 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 213

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLCK+  +  A  +   M ++    D   Y  L+ G        EAL L N M +  
Sbjct: 214 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 273

Query: 181 VDLDLNAYT--SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             L+ N +T   L+ GL + G L +A  +  +M+ +G   + +    LL    + G + E
Sbjct: 274 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKE 333

Query: 239 AIELQNEMMGRGLLSGS 255
           A+EL  +++  G +  S
Sbjct: 334 AMELWKQVLDLGFVPNS 350



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 115/235 (48%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GLC      ++  L+ EM    ++ + V   TL++   KA +  EA+ LL EM  + 
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
                VT   L+DGLCK G + EA++    M   G   +V +Y  LI G C    ++R +
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            LFDEM  + +  +   Y+ L+ G  +   +KEA  + N M E G+  D+  YT L+ GL
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            + G    A  L + M+ +G  P  +    LL    + G + +A ++   M+ +G
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 238



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 81/167 (48%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +++ GLC++G V EA+     M    + P++  Y  LI+GLCK   ++ A  L  EM   
Sbjct: 3   IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              P++   T L+DG  K     EA+ L   M + G D D+  Y +L+ G    G+L   
Sbjct: 63  GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + LF EM+G+GI  + +    L+      G   EA  + N M   G+
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 169



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 2/195 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C       +K L  EM+ +GL        TLM +  K G   +A SL  EM 
Sbjct: 353 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 412

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++  E  +++F  +IDG  K+G  +   +   +M + GL P+   ++ LI+ L K   ++
Sbjct: 413 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 472

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A++  + M      PD   Y +L+ G        E +NL ++M   G  LD    ++++
Sbjct: 473 EAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 532

Query: 193 WGLSRCGHLQEARVL 207
             L  C  +QE  V+
Sbjct: 533 TCL--CHSIQEVDVM 545


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 4/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N+KAD+  Y TII  LC +   + +  L  EM+  G+ ++ V   +L+    KAG+
Sbjct: 209 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 268

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++   LL +M+   I   V+TF VL+D   K G ++EA + +  M   G+ PN+  Y  
Sbjct: 269 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 328

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C +N +  A N+ D M +    PD   +T+LI GY   +   + + +   +++ G
Sbjct: 329 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 388

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y+ LV G  + G ++ A  LF EM+  G+LPD +    LL    + G +++A+
Sbjct: 389 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 448

Query: 241 E----LQNEMMGRGLL 252
           E    LQ   M  G++
Sbjct: 449 EIFEDLQKSKMDLGIV 464



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 123/247 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   + T+I GL +E K  ++ +L+  M ENG   + V   ++++   ++G+ S AL LL
Sbjct: 147 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 206

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M +  ++  V T+  +ID LC+ G +  AI  F  M   G+  +V  Y +L+ GLCK 
Sbjct: 207 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 266

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                   L  +M  R+++P+   +  L+D ++K    +EA  L   M   G+  ++  Y
Sbjct: 267 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 326

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G      L EA  +   M+     PD +   SL+K +     +D+ +++   +  
Sbjct: 327 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 386

Query: 249 RGLLSGS 255
           RGL++ +
Sbjct: 387 RGLVANA 393



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T++ G C++++  ++  +L  M  N  + + V  T+L+  Y     
Sbjct: 314 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 373

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + +   +    +    VT+ +L+ G C+SG ++ A + F  M   G+ P+V  Y  
Sbjct: 374 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 433

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +E+A  +F+++ K  M      YT +I+G  K    ++A NL   +   G
Sbjct: 434 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 493

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YT ++ GL + G L EA +L  +M   G  P++    +L++ H   G++  + 
Sbjct: 494 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 553

Query: 241 ELQNEMMGRGL 251
           +L  EM   G 
Sbjct: 554 KLIEEMKSCGF 564



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLS-------------------------- 34
           M+ K IK+ +  Y +++ GLC   K+ D  LLL                           
Sbjct: 244 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 303

Query: 35  ---------EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                    EM   G++ N +   TLMD Y      SEA ++LD M+ ++    +VTF  
Sbjct: 304 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 363

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G C    V + +  F  +   GL  N   Y+ L+ G C+   I+ A  LF EM    
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++PD   Y  L+DG   +   ++AL +   + +  +DL +  YT+++ G+ + G +++A 
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 483

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            LF  +  +G+ P+ +    ++    ++G++ EA  L  +M
Sbjct: 484 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 524



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 107/217 (49%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +++ NG+  N      +++ + +  +   A S+L +++    E    TF  LI GL   G
Sbjct: 103 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 162

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            V EA+    RM + G  P+V  Y ++++G+C+      A +L  +M +R++  D   Y+
Sbjct: 163 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +ID   +      A++L   M   G+   +  Y SLV GL + G   +  +L  +M+ R
Sbjct: 223 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            I+P+ I    LL    + G + EA EL  EM+ RG+
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 319



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 106/211 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + ++I G C+  + +D   +   + + GL AN V  + L+  + ++G+   A  L 
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   +   V+T+ +L+DGLC +G + +A++ F  +    +   + +YT +I+G+CK 
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A NLF  +P + + P+   YT +I G  K  S  EA  L  +M E G   +   Y
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 536

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            +L+    R G L  +  L  EM   G   D
Sbjct: 537 NTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 567



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 108/208 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L ++ + G   +T    TL+   F  G+ SEA+ L+D M+++  +  VVT+  +++G+C
Sbjct: 135 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 194

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           +SG    A+D   +M +  +  +V  Y+ +ID LC+  CI+ A +LF EM  + +     
Sbjct: 195 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 254

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y +L+ G  K   + +   L   M    +  ++  +  L+    + G LQEA  L+ EM
Sbjct: 255 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 314

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEA 239
           I RGI P+ I   +L+  +  +  + EA
Sbjct: 315 ITRGISPNIITYNTLMDGYCMQNRLSEA 342



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 91/184 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + + A+   Y  ++ G C   K + ++ L  EM  +G+  + +    L+D     G+  +
Sbjct: 387 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 446

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL + +++  S++++ +V +  +I+G+CK G V +A + F  +P  G+ PNV  YT +I 
Sbjct: 447 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 506

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCKK  +  A  L  +M +    P+   Y  LI  +L+      +  L   M   G   
Sbjct: 507 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 566

Query: 184 DLNA 187
           D ++
Sbjct: 567 DASS 570



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 4/194 (2%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A++L  EM+ SR   ++V F      + ++      +D+  ++   G+  N+     +I
Sbjct: 61  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 120

Query: 123 DGLCK--KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +  C+  K C   A ++  ++ K    PDTT +  LI G        EA+ L +RM E G
Sbjct: 121 NCFCRCCKTCF--AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 178

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y S+V G+ R G    A  L  +M  R +  D     +++      G +D AI
Sbjct: 179 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 238

Query: 241 ELQNEMMGRGLLSG 254
            L  EM  +G+ S 
Sbjct: 239 SLFKEMETKGIKSS 252



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 75/158 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  YG ++ GLC   K E +  +  +++++ +    V+ TT+++   K G+
Sbjct: 419 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 478

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L   +    ++  V+T+ V+I GLCK G + EA     +M + G  PN   Y  
Sbjct: 479 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 538

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           LI    +   +  +  L +EM       D ++   +ID
Sbjct: 539 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 576



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 111/280 (39%), Gaps = 40/280 (14%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K ++  Y  +I GLC +    ++ +LL +M+E+G   N     TL+ A+ + G+ + 
Sbjct: 492 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 551

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY--------------------- 102
           +  L++EM          +  ++ID L  S + R  + Y                     
Sbjct: 552 SAKLIEEMKSCGFSADASSIKMVIDMLL-SAMKRLTLRYCLSKGSKSRQDLLELSGSEKI 610

Query: 103 -FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM--IPDTTAYTALIDG 159
               +    + P   + T+L       N IE AR +      RD+  +  ++      + 
Sbjct: 611 RLSSLTFVKMFPCNTITTSL-----NVNTIE-ARGMNSAELNRDLRKLRRSSVLKKFKNR 664

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE---------ARVLFHE 210
            ++     E L       E  + +DL   T  V    R G ++          A  L  E
Sbjct: 665 DVRVLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKE 724

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           MI RGI P+ I   SL+    +   +DEA ++ + M+ +G
Sbjct: 725 MIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 127/252 (50%), Gaps = 6/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  N + D   Y  +I G C   K + +     EM + G++ N    T ++D Y K G+
Sbjct: 468 MKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGK 527

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              ALSL + M ++    ++ T+  +I GL K     EA  +  +M + GL PN   YT+
Sbjct: 528 IDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTS 587

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK      A  +F EM K++ +P+   YT+LI G  +      A     R+TE G
Sbjct: 588 LINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENG 643

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD-EILCISLLKKHYERGNMDEA 239
            +  ++ Y++LV GL R G   EA  L   M  +G+ P  EI C SLL  H +   +D A
Sbjct: 644 CEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYC-SLLVAHCKSLKVDCA 702

Query: 240 IELQNEMMGRGL 251
           +E+ N M  +G 
Sbjct: 703 LEIFNLMAVKGF 714



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 114/242 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G    A+   Y  II GL      E + ++ ++M ++G +   V   TL+    K G 
Sbjct: 398 MEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY 457

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A   L  M +S  E    T+C LI G CK G +  A  +F  M   G+ PN   YTA
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG CK+  I+ A +LF+ M +         Y A+I G  K   F EA     +MTE G
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG 577

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YTSL+ GL +      A  +FHEM  +  LP+     SL+    + G +D A 
Sbjct: 578 LQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAE 637

Query: 241 EL 242
            L
Sbjct: 638 RL 639



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 117/230 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C   K + +  +   M ++G   N+V  +TL++     G   EA+ +L+EM 
Sbjct: 235 YTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMT 294

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  IE TV T+ V I  LC  G V +AI+    M   G  P+V  YTA+I GL +   +E
Sbjct: 295 EKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKME 354

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  ++ +M K  ++P+T  Y ALI+       F  AL + + M   G   +   Y  ++
Sbjct: 355 LAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQII 414

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            GL     +++A V+F++M+  G  P  +   +L+ ++ +RG ++ A   
Sbjct: 415 KGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRF 464



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 111/243 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC E +F  +  +   M+ +G  AN      ++   F   +  +A+ + ++ML
Sbjct: 375 YNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKML 434

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 TVVT+  LI    K G +  A  +   M +    P+   Y  LI G CK   ++
Sbjct: 435 KDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLD 494

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A + F EM K  + P+   YTA+IDGY K      AL+L  RM E G    +  Y +++
Sbjct: 495 SATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAII 554

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GLS+     EA     +M  +G+ P+ I   SL+    +    + A ++ +EM  +  L
Sbjct: 555 SGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCL 614

Query: 253 SGS 255
             +
Sbjct: 615 PNA 617



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 5/228 (2%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           +++  S +K + LT NT+I     +   K G+  EA+ + +++    +     T+  LI 
Sbjct: 186 AQIFSSGVKPSLLTFNTMI-----NILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLIL 240

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           G C++  + +A + F RM   G +PN   Y+ LI+GLC +  I  A ++ +EM ++ + P
Sbjct: 241 GHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEP 300

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
               YT  I          +A+NL   M + G    +  YT+++ GL R G ++ A  ++
Sbjct: 301 TVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMY 360

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           H+M+  G++P+ +   +L+ +    G    A+++ + M G G L+ ++
Sbjct: 361 HKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQ 408



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 102/194 (52%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           + A ++  ++  S ++ +++TF  +I+ LCK G V+EA+  F ++  F L P+   YT+L
Sbjct: 179 TSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSL 238

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I G C+   +++A  +FD M K    P++  Y+ LI+G        EA+++   MTE G+
Sbjct: 239 ILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGI 298

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           +  +  YT  +  L   G + +A  L   M  +G  P      +++   +  G M+ AI 
Sbjct: 299 EPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIG 358

Query: 242 LQNEMMGRGLLSGS 255
           + ++M+  GL+  +
Sbjct: 359 MYHKMLKEGLVPNT 372



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 118/245 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K  L  + T+I  LC + K +++ L+ +++ +  L  +    T+L+  + +  +  +A 
Sbjct: 193 VKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAF 252

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + D M+        VT+  LI+GLC  G + EA+D    M + G+ P V  YT  I  L
Sbjct: 253 EVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSL 312

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    ++ A NL   M K+   P    YTA+I G  +    + A+ + ++M + G+  + 
Sbjct: 313 CDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNT 372

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+  L   G    A  +F  M G G L +      ++K  +   ++++A+ + N+
Sbjct: 373 VTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNK 432

Query: 246 MMGRG 250
           M+  G
Sbjct: 433 MLKDG 437



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 108/250 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+  +  Y   I  LC   + +D+  L+  M + G + +    T ++   F+AG+
Sbjct: 293 MTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGK 352

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +    VT+  LI+ LC  G    A+  F  M   G   N   Y  
Sbjct: 353 MELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQ 412

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GL   + IE+A  +F++M K    P    Y  LI   LK      A      M E  
Sbjct: 413 IIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN 472

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D   Y  L+ G  + G L  A   F+EM+  GI P++    +++  + + G +D A+
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVAL 532

Query: 241 ELQNEMMGRG 250
            L   M   G
Sbjct: 533 SLFERMEENG 542



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 107/239 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC E +  ++  +L EM E G+       T  + +    G   +A++L+  M 
Sbjct: 270 YSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMG 329

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 +V T+  +I GL ++G +  AI  + +M   GL PN   Y ALI+ LC +    
Sbjct: 330 KKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFG 389

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +FD M     + +   Y  +I G    +  ++A+ + N+M + G    +  Y +L+
Sbjct: 390 IALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLI 449

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               + G+L  A    + M      PDE     L+    + G +D A     EM+  G+
Sbjct: 450 VENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI 508



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 90/172 (52%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           T+ +F  L+  L K  +V  A + + ++   G+ P++  +  +I+ LCKK  ++ A  +F
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
           +++ + D+ PD   YT+LI G+ ++    +A  + +RM + G + +   Y++L+ GL   
Sbjct: 221 NKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G + EA  +  EM  +GI P        +    + G +D+AI L   M  +G
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKG 332



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 4/199 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ KN   +   Y ++I+GLC E K + ++     + ENG        +TL+    + G 
Sbjct: 608 MEKKNCLPNAHTYTSLIYGLCQEGKVDAAE----RLTENGCEPTIDTYSTLVSGLCREGR 663

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L++ M +  +  ++  +C L+   CKS  V  A++ F  M   G  P++ +Y  
Sbjct: 664 SNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKV 723

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC  +  E A N+F  + K+    D   +T L+DG L+       +     M    
Sbjct: 724 LICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRN 783

Query: 181 VDLDLNAYTSLVWGLSRCG 199
               L+ Y  L   LS+ G
Sbjct: 784 CTPSLHTYIILARELSKVG 802



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 31/250 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+     A +  Y  II GL   ++F +++   ++M E GL  NT+  T+L++   K   
Sbjct: 538 MEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTA 597

Query: 61  PSEALSLLDEM-------------------------------LDSRIEVTVVTFCVLIDG 89
            + A  +  EM                                ++  E T+ T+  L+ G
Sbjct: 598 TNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSG 657

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           LC+ G   EA      M + GL P++ +Y +L+   CK   ++ A  +F+ M  +   P 
Sbjct: 658 LCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPH 717

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  LI         +EALN+   + +   + DL  +T LV GL + G         +
Sbjct: 718 LFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLY 777

Query: 210 EMIGRGILPD 219
            M  R   P 
Sbjct: 778 LMESRNCTPS 787


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D   Y  +I G+C   K +++  L +E K   L  N      ++D Y KA +
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L  E+L   +E+  V +  LI   C++G   EA      M   G+ P  A Y++
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G+C    +E A+ L DEM K  ++P+   YTALI GY K     + +N+   M+   
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT ++ G S+ G ++ A  L HEM+G+GI+PD +    L     + G ++E  
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGF 791

Query: 241 ELQNEMMGRGL 251
           ++ + M   GL
Sbjct: 792 KICDYMSQEGL 802



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 122/249 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N++ +  L  T++ GLC E K  D+  L   + E G  AN V    L+    K G   E
Sbjct: 450 RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQE 509

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ LL +ML+    +  +T+  LI G CK G V E     G M   G+ P+   Y  LI 
Sbjct: 510 AVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIH 569

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G+C+   ++ A NL++E   RD++P+   Y  +IDGY K +  +E   L   +    ++L
Sbjct: 570 GMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLEL 629

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y +L+    R G+  EA  L  +M  +GI P      SL+      G M++A  L 
Sbjct: 630 NSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLI 689

Query: 244 NEMMGRGLL 252
           +EM   GLL
Sbjct: 690 DEMRKEGLL 698



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 121/243 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K   A+L     +I GLC     +++  LL +M E G   + +   TL+    K G+  E
Sbjct: 485 KGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE 544

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              L  EM+   IE    T+ +LI G+C+ G + EA++ +       L PNV  Y  +ID
Sbjct: 545 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 604

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK + IE    LF E+  +++  ++  Y  LI  Y ++ +  EA  L + M   G+  
Sbjct: 605 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 664

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
               Y+SL+ G+   G +++A+ L  EM   G+LP+ +   +L+  + + G MD+ + + 
Sbjct: 665 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 724

Query: 244 NEM 246
            EM
Sbjct: 725 QEM 727



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 110/226 (48%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K +++  ++  YG +I G C   K E+ + L +E+    L  N+V+  TL+ AY + G  
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA  L D+M    I  T  T+  LI G+C  G + +A      M   GL PNV  YTAL
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 707

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I G CK   +++  N+  EM   D+ P+   YT +IDGY K    K A  L + M   G+
Sbjct: 708 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGI 767

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
             D   Y  L  G  + G ++E   +   M   G+  DEI   +L+
Sbjct: 768 VPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 120/246 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + A L  Y  +I GL    KF ++  +L E  E G T N V+  TL+D Y K G   +AL
Sbjct: 312 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 371

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M+   I    VT   +I G CK G + +A      M   G   N   +T +I  L
Sbjct: 372 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 431

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  +  E A     EM  R+M P+    T L+ G  K     +A+ L  R+ E G   +L
Sbjct: 432 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 491

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
               +L+ GL + G++QEA  L  +M+ RG + D+I   +L+    + G ++E  +L+ E
Sbjct: 492 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 551

Query: 246 MMGRGL 251
           M+ +G+
Sbjct: 552 MVKQGI 557



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 121/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + TII  LC+ S+FE +   L EM    +  N  + TTL+    K G+ S+A+ L   +L
Sbjct: 424 FTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL 483

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      +VT   LI GLCK+G ++EA+    +M + G   +   Y  LI G CK+  +E
Sbjct: 484 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 543

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L  EM K+ + PDT  Y  LI G  +     EA+NL N      +  ++  Y  ++
Sbjct: 544 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 603

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   ++E   LF E++ + +  + ++  +L++ +   GN  EA +L ++M  +G+
Sbjct: 604 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGI 662



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  +     +II G C   + E ++ +L EM   G + N    TT++        
Sbjct: 377 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 436

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL  L EML   +         L+ GLCK G   +A++ + R+ + G   N+    A
Sbjct: 437 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 496

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK   ++ A  L  +M +R  + D   Y  LI G  K    +E   L+  M + G
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y  L+ G+ R G L EA  L++E   R ++P+      ++  + +   ++E  
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616

Query: 241 ELQNEMMGRGL 251
           +L  E++ + L
Sbjct: 617 KLFTELLTQNL 627



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 112/241 (46%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y T+I G C      D+  +  +M   G+  N+V   +++  + K G+  +A  +L+EM
Sbjct: 353 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 412

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L     +    F  +I  LC +     A+ +   M    + PN  + T L+ GLCK+   
Sbjct: 413 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 472

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  L+  + ++    +     ALI G  K  + +EA+ L  +M E G  LD   Y +L
Sbjct: 473 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 532

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G  + G ++E   L  EM+ +GI PD      L+      G +DEA+ L NE   R L
Sbjct: 533 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 592

Query: 252 L 252
           +
Sbjct: 593 V 593



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 116/248 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  D+ L+ T I   C   K ED+  L  +M++ G++ N V    L+    K G   E
Sbjct: 240 QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDE 299

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A    ++M+   +  T++T+ VLI+GL K     EA        + G  PN  VY  LID
Sbjct: 300 AFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLID 359

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +  A  +  +M  + + P++    ++I G+ K    ++A  +   M   G  +
Sbjct: 360 GYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSI 419

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +  A+T+++  L      + A     EM+ R + P++ L  +L+    + G   +A+EL 
Sbjct: 420 NPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 479

Query: 244 NEMMGRGL 251
             ++ +G 
Sbjct: 480 FRLLEKGF 487



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 112/228 (49%), Gaps = 1/228 (0%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           ++ E S  +   M++ G++ +  + +T ++A+ K G+  +A+ L  +M    +   VVT+
Sbjct: 226 NELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTY 284

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             LI GLCK G + EA  +  +M   G++  +  Y+ LI+GL K      A ++  E  +
Sbjct: 285 NNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE 344

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           +   P+   Y  LIDGY K  +  +AL ++  M   G++ +     S++ G  + G +++
Sbjct: 345 KGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQ 404

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A  +  EM+ RG   +     +++         + A+    EM+ R +
Sbjct: 405 AECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 452



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 81/160 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I      Y ++I G+C   + ED+K L+ EM++ GL  N V  T L+  Y K G+
Sbjct: 657 MRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQ 716

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + +++L EM    I    +T+ V+IDG  KSG ++ A      M   G+ P+   Y  
Sbjct: 717 MDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNV 776

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           L +G CK+  IE    + D M +  +  D   YT L+ G+
Sbjct: 777 LTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 126/246 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G   K ++  Y TII G       E ++ +L  M+  G+  ++    +L+    K G 
Sbjct: 199 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 258

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D+M++  +    VT+  LIDG C  G +  A  Y   M   G+ P+V+ Y  
Sbjct: 259 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 318

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+  L  +  +  A ++  EM K+ +IPD   Y  LI+GY +  + K A +L N M   G
Sbjct: 319 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKG 378

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++     YTSL++ LSR   ++EA  LF +++ +G+ PD I+  +++  H   GN++ A 
Sbjct: 379 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAF 438

Query: 241 ELQNEM 246
            L  EM
Sbjct: 439 MLLKEM 444



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 136/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D   YG++I G+C E + E++  L  +M E GL  N V   TL+D Y   G+
Sbjct: 234 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 293

Query: 61  PSEALSLLDEMLDSRIEVTV-----------------------------------VTFCV 85
              A S  DEM+   I  +V                                   +T+ +
Sbjct: 294 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 353

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+G  + G  + A D    M   G+ P    YT+LI  L ++N ++ A +LF+++  + 
Sbjct: 354 LINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   + A+IDG+  + + + A  L   M    V  D   + +L+ G  R G ++EAR
Sbjct: 414 VSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 473

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L  EM  RGI PD I   +L+  +  RG++ +A  +++EM+  G 
Sbjct: 474 MLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGF 519



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   +  Y  ++  L +E +  ++  ++ EM++ G+  + +    L++ Y + G 
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 363

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L +EML   IE T VT+  LI  L +   ++EA D F ++ D G+ P+V ++ A
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG C    +ERA  L  EM ++ + PD   +  L+ G  +    +EA  L + M   G
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D  +Y +L+ G  R G +++A  +  EM+  G  P  +   +L+K   +    D A 
Sbjct: 484 IKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 543

Query: 241 ELQNEMMGRGL 251
           EL  EM+ +G+
Sbjct: 544 ELLKEMVNKGI 554



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 16/206 (7%)

Query: 61  PSEALSLLDEMLDSRI--------EVTV------VTFCVLIDGLCKSGLVREAIDYFGRM 106
           P  AL LL +++++RI        E+T+      V   ++ D L   G +++A ++ G M
Sbjct: 142 PKLALQLLKQVMETRIATNRELFDELTLSRDRLSVKSSIVFDLL--EGKLKKAREFIGFM 199

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G  PNV  Y  +I G   +  IE AR + D M  + + PD+  Y +LI G  K    
Sbjct: 200 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL 259

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           +EA  L ++M E+G+  +   Y +L+ G    G L+ A     EM+ +GI+P       L
Sbjct: 260 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 319

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLL 252
           +   +  G M EA ++  EM  +G++
Sbjct: 320 VHALFMEGRMGEADDMIKEMRKKGII 345


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 120/227 (52%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + E S  L  E+ ++G          LM  + KAG+   A  + DE+    +  TVV+F 
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            LI G CKSG V E     G M   G+ P+V  ++ALI+GLCK+  ++    LFDEM  R
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            ++P+   +T LIDG  K      AL     M   GV  DL  Y +L+ GL + G L+EA
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           R L +EM   G+ PD+I   +L+    + G+M+ A+E++  M+  G+
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGI 454



 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 125/251 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++  +  + T+I G C     E+   L   M+  G+  +    + L++   K G   E
Sbjct: 277 RGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDE 336

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              L DEM    +    VTF  LIDG CK G V  A+  F  M   G+ P++  Y ALI+
Sbjct: 337 GSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALIN 396

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   ++ AR L +EM    + PD   +T LIDG  K    + AL +K RM E G++L
Sbjct: 397 GLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIEL 456

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D  A+T+L+ GL R G + +A  +  +M+  G  PD+     ++    ++G++    +L 
Sbjct: 457 DDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLL 516

Query: 244 NEMMGRGLLSG 254
            EM   G + G
Sbjct: 517 KEMQSDGHVPG 527



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 117/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D+  +  +I GLC E + ++  LL  EM   GL  N V  TTL+D   K G+
Sbjct: 309 MESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGK 368

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL     ML   +   +VT+  LI+GLCK G ++EA      M   GL P+   +T 
Sbjct: 369 VDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTT 428

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +E A  +   M +  +  D  A+TALI G  +     +A  +   M   G
Sbjct: 429 LIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAG 488

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   YT ++    + G ++    L  EM   G +P  +   +L+    ++G M  A 
Sbjct: 489 FKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAK 548

Query: 241 ELQNEMMGRGL 251
            L + M+  G+
Sbjct: 549 MLLDAMLNVGV 559



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 97/199 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ DL  Y  +I GLC     ++++ L++EM  +GL  + +  TTL+D   K G+
Sbjct: 379 MLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGD 438

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +   M++  IE+  V F  LI GLC+ G V +A      M   G  P+   YT 
Sbjct: 439 MESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTM 498

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  CKK  ++    L  EM     +P    Y AL++G  K    K A  L + M  VG
Sbjct: 499 VIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVG 558

Query: 181 VDLDLNAYTSLVWGLSRCG 199
           V  +   Y  L+ G S+ G
Sbjct: 559 VAPNDITYNILLDGHSKHG 577



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 59/145 (40%), Gaps = 35/145 (24%)

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           D G  P +  +  L+ G CK   +  AR +FDE+PKR + P   ++  LI G  K    +
Sbjct: 241 DSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVE 300

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           E   LK  M   GV  D+  +++L+ GL +                              
Sbjct: 301 EGFRLKGVMESEGVCPDVFTFSALINGLCK------------------------------ 330

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
                 G +DE   L +EM GRGL+
Sbjct: 331 -----EGRLDEGSLLFDEMCGRGLV 350


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + ++ D   YG++I G+C   K E++  +L +MKE GL    V   TL+D Y   G+
Sbjct: 297 MKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGD 356

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A    DEM+   I  TV T+ +LI  L   G + EA      M D G+ P+   Y  
Sbjct: 357 LVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNI 416

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+    ++A NL DEM  + + P    YT+LI    K    K A +L  ++   G
Sbjct: 417 LINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREG 476

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  + +L+ G    G+L  A  L  EM  R I+PDE+   +L++     G ++EA 
Sbjct: 477 ASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEAR 536

Query: 241 ELQNEMMGRGL 251
           EL  EM  RG+
Sbjct: 537 ELLKEMKRRGI 547



 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 130/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K ++  Y T+I G C   + E ++++L  MK  G+  ++    +L+    K G+
Sbjct: 262 MENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGK 321

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L++M +  +  T VT+  LIDG C  G + +A  Y   M    + P V+ Y  
Sbjct: 322 LEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNL 381

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L  +  ++ A  +  +M    ++PD+  Y  LI+GY +  + K+A NL + M   G
Sbjct: 382 LIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG 441

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   L  YTSL++ LS+   ++ A  LF ++I  G  PD I+  +L+  H   GN+D A 
Sbjct: 442 IQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAF 501

Query: 241 ELQNEMMGRGLL 252
            L  EM  R ++
Sbjct: 502 ALLKEMDKRNIV 513



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 130/248 (52%), Gaps = 3/248 (1%)

Query: 7   KADLPL---YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +A LP    Y  +I  L +E K +++  ++ +M ++G+  +++    L++ Y + G   +
Sbjct: 370 RAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKK 429

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A +L DEM+   I+ T+VT+  LI  L K   ++ A D F ++   G  P++ ++ ALID
Sbjct: 430 AFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALID 489

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C    ++RA  L  EM KR+++PD   Y  L+ G  +    +EA  L   M   G+  
Sbjct: 490 GHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRP 549

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D  +Y +L+ G S+ G + +A  +  EM+  G  P  +   +L++   +    D A EL 
Sbjct: 550 DHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELL 609

Query: 244 NEMMGRGL 251
            EM+ +G+
Sbjct: 610 KEMVSKGI 617



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 116/244 (47%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++  +I   C   + +D+      MKE G+         ++  + K  +      L  EM
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
              +I+ TV TF ++I+ LCK G +++A D+ G M + G+ PNV  Y  +I G C +  +
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E AR + D M  R + PD+  Y +LI G  K    +EA  +  +M E+G+      Y +L
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G    G L +A     EM+ R ILP       L+   +  G MDEA  +  +M   G+
Sbjct: 348 IDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGI 407

Query: 252 LSGS 255
           +  S
Sbjct: 408 VPDS 411



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 90/204 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+  L  Y ++I+ L   ++ + +  L  ++   G + + ++   L+D +   G 
Sbjct: 437 MISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGN 496

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +LL EM    I    VT+  L+ G C+ G V EA +    M   G+ P+   Y  
Sbjct: 497 LDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNT 556

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K+  I  A  + DEM      P    Y ALI G  K++    A  L   M   G
Sbjct: 557 LISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKG 616

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
           +  D + Y SL+ G+ +     EA
Sbjct: 617 ITPDDSTYFSLIEGIGKVDDSSEA 640



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 105/234 (44%), Gaps = 3/234 (1%)

Query: 22  IESKFEDSKLLLSEM---KENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
           IES+    K +  E+   ++   T ++++   L+ A  +     +A    D M +  +  
Sbjct: 140 IESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVP 199

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
            + TF  ++    K          +  M    +   V  +  +I+ LCK+  +++A++  
Sbjct: 200 KIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFI 259

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
             M    + P+   Y  +I GY      + A  + + M   GV+ D   Y SL+ G+ + 
Sbjct: 260 GSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKG 319

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G L+EA  +  +M   G+LP  +   +L+  +  +G++ +A   ++EM+ R +L
Sbjct: 320 GKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAIL 373


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 35/279 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y TI+ GLC +    D+  L  EM E G+  +    TTL+  + K G   +ALSL 
Sbjct: 394 DVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLF 453

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M    I+  +VT+ +LIDG CK+  + +A + +  M    + PN   Y  L++G C  
Sbjct: 454 GIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNL 513

Query: 129 NCIERARNLFDEMPKR------------------------------DMI-----PDTTAY 153
             +  A  L+DEM ++                               MI     PD+  Y
Sbjct: 514 GFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITY 573

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             LI+G++K E   +A  L N+M   G+  D+  Y  ++ G  R G +QEA ++  +MI 
Sbjct: 574 NTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIE 633

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           RGI PD     +L+  +  + N+ EA    +EM+ RG +
Sbjct: 634 RGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFV 672



 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 35/262 (13%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  LC + K +D K  L +M++ G+ A+ V   TL++AY + G   EA  +++ M    
Sbjct: 191 MVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKG 250

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++ T+ T+  +I+GLCK G    A   F  M   GL P+   Y  L+   C+ N    A+
Sbjct: 251 LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAK 310

Query: 136 NLFDEMPKRD-----------------------------------MIPDTTAYTALIDGY 160
           ++F +M  R                                    ++PD   YT LI+GY
Sbjct: 311 DIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGY 370

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            ++    EAL ++++M E G  LD+ AY +++ GL +   L +A  LF EM+ RG++PD 
Sbjct: 371 CRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDF 430

Query: 221 ILCISLLKKHYERGNMDEAIEL 242
               +L+  H + GNM +A+ L
Sbjct: 431 CTFTTLIHGHCKEGNMGKALSL 452



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 118/220 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNIK D+  Y  +I G C  ++ E +  L +EM    +  N +    L++ Y   G 
Sbjct: 456 MTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGF 515

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  L DEM+   I+ T+VT   +I G C+SG + +A ++ G+M   G+ P+   Y  
Sbjct: 516 VSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNT 575

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G  K   +++A  L ++M  + + PD   Y  +++G+ +    +EA  +  +M E G
Sbjct: 576 LINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERG 635

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +D D + YT+L+ G     +L+EA     EM+ RG +PD+
Sbjct: 636 IDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675



 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 133/246 (54%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   Y T++   C  + F ++K + S+M   G++ + +  ++L+    + G   +AL
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQAL 345

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
               +M  S +    V + +LI+G C++G++ EA++   +M + G   +V  Y  +++GL
Sbjct: 346 MYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGL 405

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CKK  +  A  LFDEM +R ++PD   +T LI G+ K  +  +AL+L   MT+  +  D+
Sbjct: 406 CKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDI 465

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ G  +   +++A  L++EMI R I P+ I    L+  +   G + EA  L +E
Sbjct: 466 VTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDE 525

Query: 246 MMGRGL 251
           M+ +G+
Sbjct: 526 MIRKGI 531



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 132/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL  + ++I         + + +   +MK +GL  + VI T L++ Y + G 
Sbjct: 316 MLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGM 375

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL + D+ML+    + VV +  +++GLCK  L+ +A   F  M + G+ P+   +T 
Sbjct: 376 MSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTT 435

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+  + +A +LF  M ++++ PD   Y  LIDG+ K    ++A  L N M    
Sbjct: 436 LIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +  +Y  LV G    G + EA  L+ EMI +GI P  + C +++K +   G++ +A 
Sbjct: 496 IFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKAD 555

Query: 241 ELQNEMMGRGL 251
           E   +M+  G+
Sbjct: 556 EFLGKMISEGV 566



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 119/217 (54%)

Query: 34  SEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS 93
           +E+  +G+  N      +++A  K  +  +    L +M    I   +VT+  LI+  C+ 
Sbjct: 174 NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCRE 233

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           GL+ EA +    M   GL P +  Y A+I+GLCKK    RA+ +F+EM    + PDTT Y
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             L+    ++ +F EA ++ + M   GV  DL +++SL+   SR GHL +A + F +M  
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G++PD ++   L+  +   G M EA+E++++M+ +G
Sbjct: 354 SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D  +Y  +I G C      ++  +  +M E G   + V   T+++   K   
Sbjct: 351 MKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKL 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A +L DEM++  +     TF  LI G CK G + +A+  FG M    + P++  Y  
Sbjct: 411 LADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNI 470

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +E+A  L++EM  R + P+  +Y  L++GY       EA  L + M   G
Sbjct: 471 LIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKG 530

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   L    +++ G  R G L +A     +MI  G+ PD I   +L+    +   MD+A 
Sbjct: 531 IKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAF 590

Query: 241 ELQNEMMGRGL 251
            L N+M  +GL
Sbjct: 591 FLINKMETKGL 601



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 111/242 (45%), Gaps = 5/242 (2%)

Query: 16  IIWGLCIESKFEDSKL-----LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           +++ L I S  +  KL         ++  G   +   C +L+    K G    A  + +E
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNE 175

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           +  S IE+ V T  ++++ LCK   + +   +   M   G+  ++  Y  LI+  C++  
Sbjct: 176 IARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGL 235

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +  A  + + M  + + P    Y A+I+G  K   +  A  + N M  +G+  D   Y +
Sbjct: 236 LGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNT 295

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+    R  +  EA+ +F +M+ RG+ PD I   SL+      G++D+A+    +M   G
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355

Query: 251 LL 252
           L+
Sbjct: 356 LV 357


>gi|449449098|ref|XP_004142302.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
 gi|449521427|ref|XP_004167731.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01740-like [Cucumis sativus]
          Length = 585

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 125/235 (53%), Gaps = 5/235 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++IK DL  Y  II G     +F+ S      + +NGL  + +I T +MD +FKAG 
Sbjct: 292 MFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDVHFKAGN 351

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL+    +L    E  VVT   L+DGL K G ++EA  Y  +      + N  +YT 
Sbjct: 352 IKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKE-----NANEILYTV 406

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            ID LCK+  ++ A  +  EM +   +PD   YT+ I    K  +  +A  +K RM +  
Sbjct: 407 FIDALCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAFMVKKRMVQEH 466

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           V+ DL  Y+SL+ GL+  G + EA+ +F +M+ +GI PD +    L++ ++ +GN
Sbjct: 467 VEPDLLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGITPDFVSYDILIRGYHNQGN 521



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 110/202 (54%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           T +D + K G+      +  +M+   I   +V F  LIDG CK+G +  A +YF RM + 
Sbjct: 166 TFVDMFCKMGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKEC 225

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
            + PN   Y+ LIDG  K   + RA +LF++M    ++P+ T YT++IDG+ K  +  +A
Sbjct: 226 SVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDA 285

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           +   N+M +  + LDL AYT ++ G  R G   ++      +   G+LPD I+  +++  
Sbjct: 286 IKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIMDV 345

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
           H++ GN+ EA+     ++ +G 
Sbjct: 346 HFKAGNIKEALNAYKILLAKGF 367



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + +II   C     + ++ +   M   G + + V   +L+D Y  + +  +A  L++ + 
Sbjct: 59  FNSIISFFCRSGNVKFAEHIFISMSRFGCSPDIVSYNSLLDGYCSSYQIQKACFLVNRVR 118

Query: 73  DSRI-EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
              +    +V F +L +G  K  +  EA  YFG M  + L P++  Y   +D  CK   +
Sbjct: 119 GCELNRPDLVMFNILFNGFAKVYMKNEAFMYFGLMWKYCL-PSIVTYGTFVDMFCKMGDM 177

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +    +F +M K  ++P+   +++LIDGY K  S   A     RM E  V  +   Y++L
Sbjct: 178 KMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMKECSVRPNEFTYSTL 237

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G S+ G L  A  LF +M+   ILP+  +  S++  H+++GN+D+AI+  N+M  R +
Sbjct: 238 IDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVDDAIKYINQMFDRDI 297



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 121/276 (43%), Gaps = 42/276 (15%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT +   C     +    +  +M + G+  N V+ ++L+D Y KAG    A    + M 
Sbjct: 164 YGTFVDMFCKMGDMKMGNRMFLDMMKVGIVPNLVVFSSLIDGYCKAGSLDVAFEYFERMK 223

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +     T+  LIDG  K G++  A   F +M    + PN  VYT++IDG  KK  ++
Sbjct: 224 ECSVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGNVD 283

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGY-------------------------------- 160
            A    ++M  RD+  D TAYT +I G+                                
Sbjct: 284 DAIKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTAIM 343

Query: 161 ---LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA-RVLFHEMIGRGI 216
               K  + KEALN    +   G + D+   ++L+ GLS+ G+LQEA R L  E      
Sbjct: 344 DVHFKAGNIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKEN----- 398

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +EIL    +    + GN+D+A ++  EM   G +
Sbjct: 399 -ANEILYTVFIDALCKEGNLDDAEKMIKEMSEAGFV 433



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 125/286 (43%), Gaps = 40/286 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  +++ +   Y T+I G         +  L  +M    +  N  + T+++D +FK G 
Sbjct: 222 MKECSVRPNEFTYSTLIDGCSKHGMLARADSLFEKMLSASILPNCTVYTSIIDGHFKKGN 281

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGL------------------------------ 90
             +A+  +++M D  I++ +  + V+I G                               
Sbjct: 282 VDDAIKYINQMFDRDIKLDLTAYTVIISGFHRVGRFDKSMEAAEYVAKNGLLPDRIILTA 341

Query: 91  -----CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                 K+G ++EA++ +  +   G   +V   +AL+DGL K   ++ AR    +    +
Sbjct: 342 IMDVHFKAGNIKEALNAYKILLAKGFEADVVTLSALMDGLSKHGYLQEARRYLVKENANE 401

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++     YT  ID   K  +  +A  +   M+E G   D   YTS +  L + G+L +A 
Sbjct: 402 IL-----YTVFIDALCKEGNLDDAEKMIKEMSEAGFVPDKFVYTSWIAELCKQGNLLKAF 456

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           ++   M+   + PD +   SL+    E+G M EA ++ ++M+ +G+
Sbjct: 457 MVKKRMVQEHVEPDLLTYSSLIGGLAEKGLMIEAKQVFDDMLNKGI 502


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 127/232 (54%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
            C  S+   +   L +M + G   + V  T+L++ +       EA+S++++M++  I+  
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           VV +  +ID LCK+G V  A+  F +M ++G+ P+V +YT+L++GLC       A +L  
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
            M KR + PD   + ALID ++K   F +A  L N M  + +  ++  YTSL+ G    G
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + EAR +F+ M  +G  PD +   SL+    +   +D+A+++  EM  +GL
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 115/214 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK D+ +Y TII  LC       +  L  +M+  G+  + V+ T+L++    +G   +A 
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SLL  M   +I+  V+TF  LID   K G   +A + +  M    + PN+  YT+LI+G 
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C + C++ AR +F  M  +   PD  AYT+LI+G+ K +   +A+ +   M++ G+  + 
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             YT+L+ G  + G    A+ +F  M+ RG+ P+
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 133/246 (54%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + D+  + ++I G C+ ++ E++  ++++M E G+  + V+ TT++D+  K G  + AL
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL D+M +  I   VV +  L++GLC SG  R+A      M    + P+V  + ALID  
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K+     A  L++EM +  + P+   YT+LI+G+       EA  +   M   G   D+
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            AYTSL+ G  +C  + +A  +F+EM  +G+  + I   +L++   + G  + A E+ + 
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377

Query: 246 MMGRGL 251
           M+ RG+
Sbjct: 378 MVSRGV 383



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 3/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ D+ +Y +++ GLC   ++ D+  LL  M +  +  + +    L+DA+ K G+
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L +EM+   I   + T+  LI+G C  G V EA   F  M   G  P+V  YT+
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A  +F EM ++ +  +T  YT LI G+ +      A  + + M   G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR---GILPDEILCISLLKKHYERGNMD 237
           V  ++  Y  L+  L   G +++A ++F +M  R   G+ P+      LL      G ++
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442

Query: 238 EAIELQNEMMGR 249
           +A+ +  +M  R
Sbjct: 443 KALMVFEDMRKR 454



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 115/219 (52%), Gaps = 3/219 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    D+  Y ++I G C   K +D+  +  EM + GLT NT+  TTL+  + + G+
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF---GLHPNVAV 117
           P+ A  +   M+   +   + T+ VL+  LC +G V++A+  F  M      G+ PN+  
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y  L+ GLC    +E+A  +F++M KR+M      YT +I G  K    K A+NL   + 
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
             GV  ++  YT+++ GL R G   EA VLF +M   G+
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 111/223 (49%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           +F ++  L + M E+    + +  T L++   K  +    ++L D +    +   + T  
Sbjct: 52  QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +L++  C+S     A  + G+M   G  P++  +T+LI+G C  N +E A ++ ++M + 
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   YT +ID   K+     AL+L ++M   G+  D+  YTSLV GL   G  ++A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L   M  R I PD I   +L+    + G   +A EL NEM+
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 122/250 (48%), Gaps = 3/250 (1%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +I  ++  Y ++I G C+E   ++++ +   M+  G   + V  T+L++ + K  +  +A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + +  EM    +    +T+  LI G  + G    A + F  M   G+ PN+  Y  L+  
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396

Query: 125 LCKKNCIERARNLFDEMPKRDM---IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           LC    +++A  +F++M KR+M    P+   Y  L+ G   +   ++AL +   M +  +
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           D+ +  YT ++ G+ + G ++ A  LF  +  +G+ P+ +   +++   +  G   EA  
Sbjct: 457 DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516

Query: 242 LQNEMMGRGL 251
           L  +M   G+
Sbjct: 517 LFRKMKEDGV 526



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 93/190 (48%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +EAL L   M++SR   +++ F  L++ + K       I+    +   G+  ++     L
Sbjct: 54  NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++  C+ +    A +   +M K    PD   +T+LI+G+      +EA+++ N+M E+G+
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D+  YT+++  L + GH+  A  LF +M   GI PD ++  SL+      G   +A  
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233

Query: 242 LQNEMMGRGL 251
           L   M  R +
Sbjct: 234 LLRGMTKRKI 243



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 8/197 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFC----VLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
           G   +ALS    +LD  +   V  FC    +L +GL  S    EA+D F  M +    P+
Sbjct: 16  GNSGKALSF-SRLLD--LSFWVRAFCNYREILRNGL-HSLQFNEALDLFTHMVESRPLPS 71

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           +  +T L++ + K    +   NL D +    +  D      L++ + +      A +   
Sbjct: 72  IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
           +M ++G + D+  +TSL+ G      ++EA  + ++M+  GI PD ++  +++    + G
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191

Query: 235 NMDEAIELQNEMMGRGL 251
           +++ A+ L ++M   G+
Sbjct: 192 HVNYALSLFDQMENYGI 208


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 125/247 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K++  D+  Y T+I GLC   K +++  LL EM+  G   N+V CTTLMD   K G 
Sbjct: 170 MGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGR 229

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL+ M     +  VV +  LI G C +G +    + F  M   G+  NV  Y+ 
Sbjct: 230 MDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSC 289

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+    + A  + + M +  + PD   YT LIDG  K      A++L N M E G
Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +     Y  L+ GL + G + +A  +   MI +G   D +   +L+K   ++G +DEA+
Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 409

Query: 241 ELQNEMM 247
           +L N M 
Sbjct: 410 KLFNSMF 416



 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 123/238 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC E +   +  +  +M + G   N V    L+    KAG+  EA+ L  ++L
Sbjct: 429 FNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVL 488

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D        T+ +LIDG CK  ++  A   F  M   GL+P +  Y  L+  LCK+  +E
Sbjct: 489 DLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLE 548

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A++LF EM   +  PD  ++  +IDG LK   F+    L+ +M E+G+  D   +++L+
Sbjct: 549 QAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 608

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             LS+ G L EA+     M+  G  PD ++  SLLK    +G+  E I L ++M  +G
Sbjct: 609 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 124/257 (48%), Gaps = 2/257 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K   AD+ LYGT+I G C     +  K L  EM   G++AN V  + L+    + G+
Sbjct: 240 MKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 299

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L+ M +  I   VVT+  LIDGLCK G    A+D    M + G  P+   Y  
Sbjct: 300 WKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNV 359

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLCK+  +  A  +   M ++    D   Y  L+ G        EAL L N M +  
Sbjct: 360 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 419

Query: 181 VDLDLNAYT--SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             L+ N +T   L+ GL + G L +A  +  +M+ +G   + +    LL    + G + E
Sbjct: 420 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKE 479

Query: 239 AIELQNEMMGRGLLSGS 255
           A+EL  +++  G +  S
Sbjct: 480 AMELWKQVLDLGFVPNS 496



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 101/213 (47%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           + G T N  I   ++    + G   EA+ L+ EM    +   +V++  LI+GLCK+  ++
Sbjct: 137 KRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLK 196

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           EA+     M   G  PN    T L+DGLCK   ++ A  L + M K+    D   Y  LI
Sbjct: 197 EAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLI 256

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G+  + +      L + M   G+  ++  Y+ LV GL R G  +EA  + + M   GI 
Sbjct: 257 SGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIH 316

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           PD +    L+    + G    A++L N M+ +G
Sbjct: 317 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 115/235 (48%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GLC      ++  L+ EM    ++ + V   TL++   KA +  EA+ LL EM  + 
Sbjct: 150 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 209

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
                VT   L+DGLCK G + EA++    M   G   +V +Y  LI G C    ++R +
Sbjct: 210 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 269

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            LFDEM  + +  +   Y+ L+ G  +   +KEA  + N M E G+  D+  YT L+ GL
Sbjct: 270 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 329

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            + G    A  L + M+ +G  P  +    LL    + G + +A ++   M+ +G
Sbjct: 330 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKG 384



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           + L++ +  A +P     ++  +L     V V    +++ GLC++G V EA+     M  
Sbjct: 113 SALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR 172

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
             + P++  Y  LI+GLCK   ++ A  L  EM      P++   T L+DG  K     E
Sbjct: 173 KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDE 232

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A+ L   M + G D D+  Y +L+ G    G+L   + LF EM+G+GI  + +    L+ 
Sbjct: 233 AMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVH 292

Query: 229 KHYERGNMDEAIELQNEMMGRGL 251
                G   EA  + N M   G+
Sbjct: 293 GLCRLGQWKEANTVLNAMAEHGI 315



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 2/195 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C       +K L  EM+ +GL        TLM +  K G   +A SL  EM 
Sbjct: 499 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 558

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++  E  +++F  +IDG  K+G  +   +   +M + GL P+   ++ LI+ L K   ++
Sbjct: 559 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 618

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A++  + M      PD   Y +L+ G        E +NL ++M   G  LD    ++++
Sbjct: 619 EAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTIL 678

Query: 193 WGLSRCGHLQEARVL 207
             L  C  +QE  V+
Sbjct: 679 TCL--CHSIQEVDVM 691



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 70/158 (44%)

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           EA+  F    DF L P+ A    L+D L +      A +++  M   D++P   + +ALI
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           + +   +  +    +   + + G  +++     ++ GL R G + EA  L  EM  + + 
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           PD +   +L+    +   + EA+ L  EM   G    S
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNS 214


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 134/253 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +NI  D+  +  ++ G C E + +++K +L+ M   G+    V   +LMD YF   + ++
Sbjct: 171 ENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNK 230

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+ + M    +   + ++ +LI+G CK  ++ EA++    M    + PNV  Y++LID
Sbjct: 231 AKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLID 290

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   I  A  L DEM  R   P+   Y++++D   K+     A+ L  +M   G+  
Sbjct: 291 GLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQP 350

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  YT L+ GL + G L++AR +F +++ +G   +      +++   ++G  DEA+ L 
Sbjct: 351 NMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLL 410

Query: 244 NEMMGRGLLSGSK 256
           ++M   G +  +K
Sbjct: 411 SKMEDNGCIPNAK 423



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 131/261 (50%), Gaps = 10/261 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLC----IESKFED-SKLLLSEMKENGLTANTVI---CTT-- 50
           M+ + IK +L     +I   C    I S F   +K+L    K N +T NT+I   C    
Sbjct: 88  MEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGK 147

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           + D +   G+  +A+ L ++M+   I   V TF +L+DG CK G V+EA +    M   G
Sbjct: 148 IHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQG 207

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P V  Y +L+DG      + +A+++F+ M +  + PD  +Y+ LI+G+ K +   EA+
Sbjct: 208 IKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAM 267

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   M    +  ++  Y+SL+ GL + G +  A  L  EM  RG  P+ +   S+L   
Sbjct: 268 ELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDAL 327

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            +   +D AI L  +M  +G+
Sbjct: 328 CKNHQVDNAIALLTQMKNQGI 348



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 5/222 (2%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y  +I G C     +++  LL EM    +  N V  ++L+D   K+G+ S AL
Sbjct: 243 VSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYAL 302

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+DEM D      +VT+  ++D LCK+  V  AI    +M + G+ PN+  YT LI GL
Sbjct: 303 KLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGL 362

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   +E AR +F+++  +    +   YT +I G+     F EAL L ++M + G   + 
Sbjct: 363 CQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNA 422

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMI-----GRGILPDEIL 222
             Y  ++  L +    + A  L  EMI     GR  L ++++
Sbjct: 423 KTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLI 464



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 10/246 (4%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKE----------NGLTANTVICTTLMDAYFKAGEPSEA 64
           T+I GLC+  K  D   ++ ++K+            +  +    T L+D + K G   EA
Sbjct: 137 TLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEA 196

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
            ++L  M+   I+  VVT+  L+DG      V +A   F  M   G+ P++  Y+ LI+G
Sbjct: 197 KNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILING 256

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK   ++ A  L  EM  + +IP+   Y++LIDG  K      AL L + M + G   +
Sbjct: 257 FCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPN 316

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y+S++  L +   +  A  L  +M  +GI P+      L+K   + G +++A ++  
Sbjct: 317 IVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFE 376

Query: 245 EMMGRG 250
           +++ +G
Sbjct: 377 DLLVKG 382



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 107/234 (45%), Gaps = 8/234 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y ++I GLC   K   +  L+ EM + G   N V  ++++DA  K  +
Sbjct: 273 MHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQ 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A++LL +M +  I+  + T+ +LI GLC+SG + +A   F  +   G + NV  YT 
Sbjct: 333 VDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTV 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C K   + A  L  +M     IP+   Y  +I    K +  + A  L   M E  
Sbjct: 393 MIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETN 452

Query: 181 VDLDL---NAYTSLVW--GLSRCGHL---QEARVLFHEMIGRGILPDEILCISL 226
            D  +   N   + +W  G S    L   ++ +  ++  I  G LP   +C S 
Sbjct: 453 FDGRVALTNDLIASIWVTGSSPGNSLLCKKQGKAAYNTPIMVGPLPGPCVCGSF 506



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 12/237 (5%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           +D+  L + + +   T   +    ++ +  K+      L L  +M    I+  +V   +L
Sbjct: 44  DDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 103

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC------KKNCI----ERARN 136
           I+  C+ G +  A     ++   G  PN      LI GLC       K+CI    + A +
Sbjct: 104 INSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVD 163

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           LF++M   ++ PD   +T L+DG+ K    KEA N+   M   G+   +  Y SL+ G  
Sbjct: 164 LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF 223

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNEMMGRGLL 252
               + +A+ +F+ M   G+ PD I   S+L   + +   MDEA+EL  EM  + ++
Sbjct: 224 LVKQVNKAKSIFNTMAQLGVSPD-IQSYSILINGFCKIKMMDEAMELLKEMHHKQII 279



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 30/146 (20%), Positives = 64/146 (43%), Gaps = 10/146 (6%)

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
           H N   Y +        N ++ A +LF+ + +++  P    +  ++   +K + +   L 
Sbjct: 24  HFNFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLY 83

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK--- 228
           L  +M   G+  +L     L+    + GH+  A  +  +++  G  P+ I   +L+K   
Sbjct: 84  LSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLC 143

Query: 229 -------KHYERGNMDEAIELQNEMM 247
                  KH   G + +A++L N+M+
Sbjct: 144 LNGKIHDKHCIVGKLKDAVDLFNKMI 169


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 124/254 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K     +  YG II G C + KFE    LL EM E GL  +  I   ++DA FK G 
Sbjct: 233 LKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGC 292

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   +  M+ S  +  + T+ +LI G C  G V +A     +    GL PN   YT 
Sbjct: 293 RIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTP 352

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   CK+    RA +L  +M +R   PD   Y ALI G +       AL ++N+M E G
Sbjct: 353 LIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKG 412

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D N Y  L+ GL + G L  A+VL  EM+ + + PD  +  +L+      G+ +EA 
Sbjct: 413 VLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAK 472

Query: 241 ELQNEMMGRGLLSG 254
           +L    + +G+  G
Sbjct: 473 KLFELTIEKGIDPG 486



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 122/249 (48%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+    ++  Y T+I G C +   E + +L  E+K  G          +++ + K G+  
Sbjct: 200 GRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFE 259

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
               LL EM +  ++V++  +  +ID   K G   EA D  G M   G  P++A Y  LI
Sbjct: 260 VVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILI 319

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C    + +A  L ++  KR ++P+  +YT LI  Y K   +  AL+L  +M+E G  
Sbjct: 320 TGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHK 379

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            DL  Y +L+ GL   G +  A  + ++M+ +G+LPD  +   L+    ++G +  A  L
Sbjct: 380 PDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVL 439

Query: 243 QNEMMGRGL 251
             EM+ + +
Sbjct: 440 LAEMLDQNV 448



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 119/234 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I G C   +   ++ LL +  + GL  N V  T L+  Y K GE   AL LL
Sbjct: 311 DMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLL 370

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M +   +  +VT+  LI GL  +G V  A+    +M + G+ P+  +Y  L+ GLCKK
Sbjct: 371 IKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKK 430

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A+ L  EM  +++ PD      L+DG+++H  F+EA  L     E G+D  +  Y
Sbjct: 431 GRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGY 490

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +++ G  + G +++A + F  MI     PDE    +++  + +  ++  A+ +
Sbjct: 491 NAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRM 544



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 105/238 (44%), Gaps = 35/238 (14%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C +L++   K G+   A  + DEM+D   EV   T C+++ GLCK G V +      +  
Sbjct: 140 CNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRW 199

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             G  PN+  Y  LIDG CKK   ERA  LF E+  +  +P    Y A+I+G+ K   F+
Sbjct: 200 GRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFE 259

Query: 168 -----------------------------------EALNLKNRMTEVGVDLDLNAYTSLV 192
                                              EA +    M + G D D+  Y  L+
Sbjct: 260 VVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILI 319

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G   CG + +A  L  + I RG+LP+++    L+  + ++G    A++L  +M  RG
Sbjct: 320 TGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERG 377



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 2/222 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D  +Y  ++ GLC + +   +K+LL+EM +  +  +  I  TL+D + + G+
Sbjct: 408 MVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGD 467

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH-PNVAVYT 119
             EA  L +  ++  I+  VV +  +I G CK G++++A+  F RM   GLH P+   Y+
Sbjct: 468 FEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQ-GLHSPDEFTYS 526

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +IDG  K N +  A  +F  M K    P+   YT LI+G+        A     +M  +
Sbjct: 527 TIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSL 586

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
            +  ++  YT L+    +  +L +A   F +M+    LP+++
Sbjct: 587 RLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDV 628



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 106/247 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K DL  Y  +I GL +  + + +  + ++M E G+  +  I   LM    K G 
Sbjct: 373 MSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGR 432

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EMLD  +         L+DG  + G   EA   F    + G+ P V  Y A
Sbjct: 433 LPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNA 492

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G CK   ++ A   F  M +    PD   Y+ +IDGY+K      AL +   M +  
Sbjct: 493 MIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGA 552

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YT L+ G    G +  A   F +M+   + P+ +    L+    +  N+ +A 
Sbjct: 553 CKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKAC 612

Query: 241 ELQNEMM 247
               +M+
Sbjct: 613 SFFEQML 619



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 14/237 (5%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I   +  Y  +I G C     +D+ L    M +   + +    +T++D Y K  +   
Sbjct: 481 KGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHG 540

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL +   M+    +  VVT+ +LI+G C SG +  A   F +M    L PNV  YT LI 
Sbjct: 541 ALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIG 600

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV---- 179
             CK   + +A + F++M     +P+   Y  L++G   +  F  + N ++  TE     
Sbjct: 601 CFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVIS-NQRSEQTENSLVL 659

Query: 180 ---------GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
                    G D    +Y S++  L +   ++ A  L  +M+ +G LPD +  ++LL
Sbjct: 660 ESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALL 716



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 105/235 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C + ++  +  LL +M E G   + V    L+     AGE   AL++ ++M+
Sbjct: 350 YTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMV 409

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +      + VL+ GLCK G +  A      M D  + P+  +   L+DG  +    E
Sbjct: 410 EKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFE 469

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ LF+   ++ + P    Y A+I GY K    K+AL    RM +     D   Y++++
Sbjct: 470 EAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTII 529

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            G  +   L  A  +F  M+     P+ +    L+      G+++ A +   +M+
Sbjct: 530 DGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQML 584



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 5/221 (2%)

Query: 34  SEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS 93
           S+    G   N   C++L+    +    SE  SLL  M    +  T   F ++I      
Sbjct: 55  SKQSNCGNYLNEFSCSSLLRLLARRRLFSEVESLLKIMKSKDLMPTREAFSLVISVFADC 114

Query: 94  GLVREAIDYFGRMPDFGLH---PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           GLV  A++++       +H   P+V    +L++ L K   +E A  ++DEM  R+   D 
Sbjct: 115 GLVDRALEFYRTF--IKIHHCVPDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDN 172

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
                ++ G  K    ++   L  +    G   ++  Y +L+ G  + G  + A VLF E
Sbjct: 173 YTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKE 232

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  +G LP      +++    ++G  +   +L  EM  RGL
Sbjct: 233 LKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGL 273



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 24/223 (10%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  Y  +I G C+      ++    +M    L  N V  T L+  + K    ++A S
Sbjct: 554 KPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACS 613

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLC---------------KSGLVREAIDYFGRMPDFGL 111
             ++ML  +     VT+  L++GL                ++ LV E+   FG M   G 
Sbjct: 614 FFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLES---FGMMISDGW 670

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL---KHESFKE 168
               A Y +++  LC+   ++ A +L D+M  +  +PD  +  AL+ G     + + +  
Sbjct: 671 DRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNN 730

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            ++ K    E+ V +    Y+  +      G   EA ++ H +
Sbjct: 731 VISCKLNERELQVAV---KYSEKLDAFLSQGQTSEASLILHSL 770



 Score = 43.9 bits (102), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 31/147 (21%), Positives = 67/147 (45%), Gaps = 1/147 (0%)

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEA 169
           L P    ++ +I        ++RA   +    K    +PD  +  +L++  +KH   + A
Sbjct: 97  LMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIA 156

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             + + M +   ++D      +V GL + G +++   L  +  GRG +P+ +   +L+  
Sbjct: 157 CKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDG 216

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGSK 256
           + ++G+ + A  L  E+  +G L   K
Sbjct: 217 YCKKGDTERANVLFKELKMKGFLPTVK 243


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 129/247 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  DL  Y  +I  LC  S+F  +  ++ +M + G   + V  ++L++ + +     +A+
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ +M +      VV +  +IDG CK GLV +A++ F RM   G+  +   Y +L+ GL
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  L  +M  RD++P+   +TA+ID ++K   F EA+ L   MT   VD D+
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL+ GL   G + EA+ +   M+ +G LPD +   +L+    +   +DE  +L  E
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339

Query: 246 MMGRGLL 252
           M  RGL+
Sbjct: 340 MAQRGLV 346



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 32/284 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++AD   Y +++ GLC   ++ D+  L+ +M    +  N +  T ++D + K G+
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA+ L +EM    ++  V T+  LI+GLC  G V EA      M   G  P+V  Y  
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK-------HESF------- 166
           LI+G CK   ++    LF EM +R ++ DT  Y  +I GY +        E F       
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 379

Query: 167 ------------------KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
                             ++AL L   M +  ++LD+  Y  ++ G+ + G++++A  LF
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +  +G+ PD +   +++     +   D++  L  +M   GLL
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 121/243 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+    ++I G C  ++  D+  L+S+M+E G   + VI  T++D   K G  ++A+ 
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L D M    +    VT+  L+ GLC SG   +A      M    + PNV  +TA+ID   
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+     A  L++EM +R + PD   Y +LI+G   H    EA  + + M   G   D+ 
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +L+ G  +   + E   LF EM  RG++ D I   ++++ +++ G  D A E+ + M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375

Query: 247 MGR 249
             R
Sbjct: 376 DSR 378



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 102/214 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    + D+ +Y TII G C      D+  L   M+ +G+ A+ V   +L+     +G 
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L+ +M+   I   V+TF  +ID   K G   EA+  +  M    + P+V  Y +
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC    ++ A+ + D M  +  +PD   Y  LI+G+ K +   E   L   M + G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +  D   Y +++ G  + G    A+ +F  M  R
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 3/218 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y ++I GLC+  + +++K +L  M   G   + V   TL++ + K+  
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L  EM    +    +T+  +I G  ++G    A + F RM      PN+  Y+ 
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSI 386

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    +E+A  LF+ M K ++  D T Y  +I G  K  + ++A +L   ++  G
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D+ +YT+++ G  R     ++ +L+ +M   G+LP
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 5/238 (2%)

Query: 17  IWGLCIESK-----FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            WG    +K      E+   L  +M ++    + V  + ++    K+      +SL   M
Sbjct: 36  FWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM 95

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               I   + ++ ++I+ LC+      A+   G+M  FG  P+V   ++LI+G C+ N +
Sbjct: 96  EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A +L  +M +    PD   Y  +IDG  K     +A+ L +RM   GV  D   Y SL
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           V GL   G   +A  L  +M+ R I+P+ I   +++    + G   EA++L  EM  R
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 91/190 (47%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           E + L  +M+ SR   ++V F  ++  + KS      I  F  M   G+  ++  Y  +I
Sbjct: 52  EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC+ +    A ++  +M K    PD    ++LI+G+ +     +A++L ++M E+G  
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y +++ G  + G + +A  LF  M   G+  D +   SL+      G   +A  L
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231

Query: 243 QNEMMGRGLL 252
             +M+ R ++
Sbjct: 232 MRDMVMRDIV 241


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 129/250 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I  D+  Y  ++ G CI  +   +  LL+EM    +  +    T L+DA  K G+
Sbjct: 224 MVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGK 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L  M+ + + + VV +  L+DG C    V  A   F  M   G+ P+V  Y+ 
Sbjct: 284 VKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSI 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK   ++ A NLF+E+ +++M+PDT  YT+LID   K        +L + M + G
Sbjct: 344 MINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +L+  L + GHL  A  LF++M  + I P+      LL    + G +  A+
Sbjct: 404 QPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNAL 463

Query: 241 ELQNEMMGRG 250
           E   +++ +G
Sbjct: 464 EFFQDLLTKG 473



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 133/247 (53%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +I+ ++ +Y  II  LC ++  +++  L +EM   G++ + V  + L+  +   G+ + A
Sbjct: 193 SIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRA 252

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + LL+EM+   I   + T+ +L+D LCK G V+EA +    M    ++ +V VY+ L+DG
Sbjct: 253 IDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDG 312

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            C  N +  A+ +F  M +  + PD   Y+ +I+G  K +   EALNL   + +  +  D
Sbjct: 313 YCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPD 372

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              YTSL+  L + G +     LF EM+ RG  PD I   +L+    + G++D AI L N
Sbjct: 373 TVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFN 432

Query: 245 EMMGRGL 251
           +M  + +
Sbjct: 433 KMKDQAI 439



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 127/247 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+ +Y T++ G C+ ++  ++K +   M + G+T +    + +++   K     EAL
Sbjct: 299 VNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEAL 358

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L +E+    +    VT+  LID LCKSG +    D F  M D G  P+V  Y  LID L
Sbjct: 359 NLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDAL 418

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   ++RA  LF++M  + + P+   +T L+DG  K    K AL     +   G  L++
Sbjct: 419 CKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNV 478

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT ++ GL + G L EA  L   M   G + D +    +++  +++   D+A +L  E
Sbjct: 479 RTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVRE 538

Query: 246 MMGRGLL 252
           M+ RGLL
Sbjct: 539 MIARGLL 545



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 108/217 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y  +I GLC   + +++  L  E+ +  +  +TV  T+L+D   K+G 
Sbjct: 329 MTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGR 388

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S    L DEMLD      V+T+  LID LCK+G +  AI  F +M D  + PNV  +T 
Sbjct: 389 ISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTI 448

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   ++ A   F ++  +    +   YT +I+G  K     EAL L++RM + G
Sbjct: 449 LLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
              D   +  ++          +A  L  EMI RG+L
Sbjct: 509 CISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I G+C   +   +  LL  ++   +  N VI + ++D   K     EA  L  EM+
Sbjct: 166 YGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMV 225

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+ +L+ G C  G +  AID    M    ++P++  YT L+D LCK+  ++
Sbjct: 226 GKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVK 285

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A N+   M K  +  D   Y+ L+DGY        A  +   MT++GV  D++ Y+ ++
Sbjct: 286 EAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMI 345

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL +   + EA  LF E+  + ++PD +   SL+    + G +    +L +EM+ RG
Sbjct: 346 NGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRG 403



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 122/243 (50%), Gaps = 2/243 (0%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
            T++ GLC+E K +++     ++   G   + +    L++   K GE   A+ LL  +  
Sbjct: 132 NTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIER 191

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             I   VV + ++ID LCK  LV EA D +  M   G+ P+V  Y+ L+ G C    + R
Sbjct: 192 WSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNR 251

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A +L +EM   ++ PD   YT L+D   K    KEA N+   M +  V+LD+  Y++L+ 
Sbjct: 252 AIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMD 311

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER-GNMDEAIELQNEMMGRGLL 252
           G      +  A+ +F+ M   G+ PD + C S++     +   +DEA+ L  E+  + ++
Sbjct: 312 GYCLVNEVNNAKRVFYTMTQMGVTPD-VHCYSIMINGLCKIKRVDEALNLFEEIHQKNMV 370

Query: 253 SGS 255
             +
Sbjct: 371 PDT 373



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 103/195 (52%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           +S++ + G   NT+   TLM      G+  EAL   D++L     ++ +++ +LI+G+CK
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
            G  R AI    R+  + + PNV +Y+ +ID LCK   ++ A +L+ EM  + + PD   
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y+ L+ G+        A++L N M    ++ D+  YT LV  L + G ++EA  +   M+
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295

Query: 213 GRGILPDEILCISLL 227
              +  D ++  +L+
Sbjct: 296 KACVNLDVVVYSTLM 310



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 86/184 (46%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+SL  +M  S +E    T  ++I+  C  G V  A     ++   G  PN      L+ 
Sbjct: 77  AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMK 136

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC +  ++ A    D++  +       +Y  LI+G  K    + A+ L  R+    +  
Sbjct: 137 GLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRP 196

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y+ ++  L +   + EA  L+ EM+G+GI PD +    L+      G ++ AI+L 
Sbjct: 197 NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLL 256

Query: 244 NEMM 247
           NEM+
Sbjct: 257 NEMV 260


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 120/248 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   + +I+ GLC   KFE +  LL+ M E     +     TL+    K   
Sbjct: 36  MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 95

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L+DE + S     VVT+ +L DGLCK G + EA +    M   G  PN+  Y  
Sbjct: 96  VDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNT 155

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK +  E+A  L + +     +PD   YT ++DG  K     +AL +   M + G
Sbjct: 156 LIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 215

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  YT+L+ GL R G + EA  +F EM+ +    D +  +SL+  + +     EA 
Sbjct: 216 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 275

Query: 241 ELQNEMMG 248
           ++ + + G
Sbjct: 276 KVVDGIRG 283



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 118/249 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y  +I GLC  SK + +  +L EM + G+T +TV   ++MD   KAG+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SLL  M +     +  T+  LI GLCK   V  A          G  P+V  Y+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L DGLCK+  I+ A  L  EM      P+   Y  LIDG  K    ++A  L   +   G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YT +V GL + G L +A  +   M+ RG  P  I   +L++     G +DEA 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 241 ELQNEMMGR 249
            +  EM+ +
Sbjct: 241 HIFKEMVSK 249



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 4/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+  AD   Y +++ G C  S+ ++++ ++  ++    T    +   LMD Y K G 
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGR 302

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  ++ ++M        + T+ +++DGLCK G V EA  +   M   G  P+V  Y  
Sbjct: 303 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 362

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGL K +  + AR + D+M +  + PD   Y  L+  + K E F +A+ +   M + G
Sbjct: 363 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 422

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI-SLLKKHYERGNMDEA 239
           VD D   Y +L+ GLS+   L +A  L HEM+  G +        +++ +  + G + +A
Sbjct: 423 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQA 482

Query: 240 IELQNEMMGRGL 251
           + L + M G G+
Sbjct: 483 LLLMDHMTGHGV 494



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 102/215 (47%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E  +  +      L+D   KA +  +A  +L EM+D  +    VTF  ++DGLCK+G 
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
              A      M +    P+   Y  LI GLCK+  ++RA+ L DE      +PD   Y+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L DG  K     EA  L   M+  G   +L  Y +L+ GL +    ++A  L   ++  G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +PD +    ++    + G +D+A+++   M+ RG
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 215



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 5/252 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D   Y T++   C E +F+D+  +L  M + G+  + V   TL+    +     +A 
Sbjct: 388 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 447

Query: 66  SLLDEMLDSRIEVTV-VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
            L+ EML +   V+   T+  +ID LCK G +++A+     M   G+  N   Y   ID 
Sbjct: 448 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 507

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV-GVDL 183
           LCK+  ++ A +L  EM   D + D  +YT +I G  K E    A  L   M  V G+ +
Sbjct: 508 LCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCI 564

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
             + +  L+   ++   L EA  L   M+ RG  P  I    ++    +   +D+A EL 
Sbjct: 565 TSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 624

Query: 244 NEMMGRGLLSGS 255
           +EM  RG+++ S
Sbjct: 625 DEMAVRGIVASS 636



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 88/182 (48%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M + ++   V T+ +LIDGLCK+    +A +    M D G+ P+   + +++DGLCK   
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
            ERA +L   M +R+  P    Y  LI G  K ++   A  L +     G   D+  Y+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L  GL + G + EA  L  EM G G  P+ +   +L+    +    ++A EL   ++  G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 251 LL 252
            +
Sbjct: 181 FV 182



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 98/235 (41%), Gaps = 33/235 (14%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII  LC E   + + LL+  M  +G+ ANTV     +D   K G   EA SLL EM 
Sbjct: 466 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 525

Query: 73  DSRIEV---TVV------------------------------TFCVLIDGLCKSGLVREA 99
             R EV   TV+                              TF +LID   K+  + EA
Sbjct: 526 TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 585

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +     M   G  P+V  Y  +I  LCK + +++A  LFDEM  R ++  + +YT LI G
Sbjct: 586 LTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 645

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
                  KEAL +   M     ++D      L   L   G  +EA  L   M  +
Sbjct: 646 LCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 129/247 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  DL  Y  +I  LC  S+F  +  ++ +M + G   + V  ++L++ + +     +A+
Sbjct: 41  IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 100

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ +M +      VV +  +IDG CK GLV +A++ F RM   G+  +   Y +L+ GL
Sbjct: 101 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 160

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  L  +M  RD++P+   +TA+ID ++K   F EA+ L   MT   VD D+
Sbjct: 161 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 220

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL+ GL   G + EA+ +   M+ +G LPD +   +L+    +   +DE  +L  E
Sbjct: 221 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 280

Query: 246 MMGRGLL 252
           M  RGL+
Sbjct: 281 MAQRGLV 287



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 32/284 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++AD   Y +++ GLC   ++ D+  L+ +M    +  N +  T ++D + K G+
Sbjct: 141 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA+ L +EM    ++  V T+  LI+GLC  G V EA      M   G  P+V  Y  
Sbjct: 201 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK-------HESF------- 166
           LI+G CK   ++    LF EM +R ++ DT  Y  +I GY +        E F       
Sbjct: 261 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 320

Query: 167 ------------------KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
                             ++AL L   M +  ++LD+  Y  ++ G+ + G++++A  LF
Sbjct: 321 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 380

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +  +G+ PD +   +++     +   D++  L  +M   GLL
Sbjct: 381 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 424



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 121/243 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+    ++I G C  ++  D+  L+S+M+E G   + VI  T++D   K G  ++A+ 
Sbjct: 77  EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 136

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L D M    +    VT+  L+ GLC SG   +A      M    + PNV  +TA+ID   
Sbjct: 137 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 196

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+     A  L++EM +R + PD   Y +LI+G   H    EA  + + M   G   D+ 
Sbjct: 197 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 256

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +L+ G  +   + E   LF EM  RG++ D I   ++++ +++ G  D A E+ + M
Sbjct: 257 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 316

Query: 247 MGR 249
             R
Sbjct: 317 DSR 319



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 102/214 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    + D+ +Y TII G C      D+  L   M+ +G+ A+ V   +L+     +G 
Sbjct: 106 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 165

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L+ +M+   I   V+TF  +ID   K G   EA+  +  M    + P+V  Y +
Sbjct: 166 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 225

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC    ++ A+ + D M  +  +PD   Y  LI+G+ K +   E   L   M + G
Sbjct: 226 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 285

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +  D   Y +++ G  + G    A+ +F  M  R
Sbjct: 286 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 319



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 3/218 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y ++I GLC+  + +++K +L  M   G   + V   TL++ + K+  
Sbjct: 211 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L  EM    +    +T+  +I G  ++G    A + F RM      PN+  Y+ 
Sbjct: 271 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSI 327

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    +E+A  LF+ M K ++  D T Y  +I G  K  + ++A +L   ++  G
Sbjct: 328 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 387

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D+ +YT+++ G  R     ++ +L+ +M   G+LP
Sbjct: 388 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 91/186 (48%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            +SL   M    I   + ++ ++I+ LC+      A+   G+M  FG  P+V   ++LI+
Sbjct: 29  VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 88

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C+ N +  A +L  +M +    PD   Y  +IDG  K     +A+ L +RM   GV  
Sbjct: 89  GFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRA 148

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D   Y SLV GL   G   +A  L  +M+ R I+P+ I   +++    + G   EA++L 
Sbjct: 149 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 208

Query: 244 NEMMGR 249
            EM  R
Sbjct: 209 EEMTRR 214



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 87/182 (47%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M+ SR   ++V F  ++  + KS      I  F  M   G+  ++  Y  +I+ LC+ + 
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A ++  +M K    PD    ++LI+G+ +     +A++L ++M E+G   D+  Y +
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++ G  + G + +A  LF  M   G+  D +   SL+      G   +A  L  +M+ R 
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 251 LL 252
           ++
Sbjct: 181 IV 182


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 127/246 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G   K ++  Y TII G       E ++ +L  M+  G+  ++    +L+    K G 
Sbjct: 253 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D+M++  +    VT+  LIDG C  G +  A  Y   M   G+ P+V+ Y  
Sbjct: 313 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+  L  +  +  A ++  EM K+ +IPD   Y  LI+GY +  + K+A +L N M   G
Sbjct: 373 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 432

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++     YTSL++ LSR   ++EA  LF +++ +G+ PD I+  +++  H   GN++ A 
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 492

Query: 241 ELQNEM 246
            L  EM
Sbjct: 493 MLLKEM 498



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 137/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D   YG++I G+C E + E++  L  +M E GL  N V   TL+D Y   G+
Sbjct: 288 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 347

Query: 61  PSEALSLLDEMLDSRIEVTV-----------------------------------VTFCV 85
              A S  DEM+   I  +V                                   +T+ +
Sbjct: 348 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 407

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+G  + G  ++A D    M   G+ P    YT+LI  L ++N ++ A +LF+++  + 
Sbjct: 408 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   + A++DG+  + + + A  L   M    V  D   + +L+ G  R G ++EAR
Sbjct: 468 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 527

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L  EM  RGI PD I   +L+  +  RG++ +A  +++EM+  G 
Sbjct: 528 MLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 573



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 121/246 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I + +  +  ++  LC E K + ++  +  M+  G   N V   T++  Y   G    A 
Sbjct: 223 ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGAR 282

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +LD M    IE    T+  LI G+CK G + EA   F +M + GL PN   Y  LIDG 
Sbjct: 283 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 342

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C K  +ERA +  DEM K+ ++P  + Y  L+          EA ++   M + G+  D 
Sbjct: 343 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 402

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ G SRCG+ ++A  L +EM+ +GI P  +   SL+     R  M EA +L  +
Sbjct: 403 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 462

Query: 246 MMGRGL 251
           ++ +G+
Sbjct: 463 ILDQGV 468



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   +  Y  ++  L +E +  ++  ++ EM++ G+  + +    L++ Y + G 
Sbjct: 358 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 417

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L +EML   IE T VT+  LI  L +   ++EA D F ++ D G+ P+V ++ A
Sbjct: 418 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 477

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG C    +ERA  L  EM ++ + PD   +  L+ G  +    +EA  L + M   G
Sbjct: 478 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 537

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D  +Y +L+ G  R G +++A  +  EM+  G  P  +   +L+K   +    D A 
Sbjct: 538 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 597

Query: 241 ELQNEMMGRGL 251
           EL  EM+ +G+
Sbjct: 598 ELLKEMVNKGI 608



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 35/251 (13%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           MKE G+      C  ++  + K      A  L  EM   RI  TV TF ++++ LCK G 
Sbjct: 183 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 242

Query: 96  VREAIDYFGRMPDFGLHPNVAVYT-----------------------------------A 120
           +++A ++ G M   G  PNV  Y                                    +
Sbjct: 243 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 302

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G+CK+  +E A  LFD+M +  ++P+   Y  LIDGY      + A + ++ M + G
Sbjct: 303 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 362

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   ++ Y  LV  L   G + EA  +  EM  +GI+PD I    L+  +   GN  +A 
Sbjct: 363 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 422

Query: 241 ELQNEMMGRGL 251
           +L NEM+ +G+
Sbjct: 423 DLHNEMLSKGI 433



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 3/192 (1%)

Query: 67  LLDEMLDSRIEVTV---VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           L DE+  SR  ++V   + F +L+   C+     EA   F  M + G+ P +     ++ 
Sbjct: 141 LFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS 200

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
              K N +E A  L+ EM +  +      +  +++   K    K+A      M  +G   
Sbjct: 201 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKP 260

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++ +Y +++ G S  G+++ AR +   M  +GI PD     SL+    + G ++EA  L 
Sbjct: 261 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 320

Query: 244 NEMMGRGLLSGS 255
           ++M+  GL+  +
Sbjct: 321 DKMVEIGLVPNA 332


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 127/239 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  LL  +  N +  N V+  T++D+  K    +EA  L  EM+
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMV 252

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G C  G +++AID F +M    + P+V  +  L++  CK   ++
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + +FD M K+ + P+   Y +L+DGY   +   +A ++ N M + GV+ D+ +Y+ ++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +     EA  LF EM  + I+PD +   SL+    + G +  A++L ++M  RG+
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 131/249 (52%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  ++ ++ +Y TII  +C      ++  L SEM   G++ + V  + L+  +   G+  
Sbjct: 218 GNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLK 277

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L ++M+   I+  V TF +L++  CK G ++E    F  M   G+ PN   Y +L+
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C    + +A+++F+ M +  + PD  +Y+ +I+G+ K + F EA+NL   M    + 
Sbjct: 338 DGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNII 397

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y+SL+ GLS+ G +  A  L  +M  RG+ P+     S+L    +   +D+AI L
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIAL 457

Query: 243 QNEMMGRGL 251
             +   +G 
Sbjct: 458 LTKFKDKGF 466



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 128/250 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y  +I G CI  K +D+  L ++M    +  +      L++A+ K G+
Sbjct: 251 MVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  ++ D M+   I+   VT+  L+DG C    V +A   F  M   G++P++  Y+ 
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK    + A NLF EM ++++IPD   Y++LIDG  K      AL L ++M + G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y S++  L +   + +A  L  +   +G  PD      L+K   + G +++A 
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDAR 490

Query: 241 ELQNEMMGRG 250
           ++  +++ +G
Sbjct: 491 KVFEDLLVKG 500



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 8/255 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK +   Y +++ G C+  +   +K + + M + G+  +    + +++ + K  +
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKK 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L  EM    I   VVT+  LIDGL KSG +  A+    +M D G+ PN+  Y +
Sbjct: 381 FDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNS 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D LCK + +++A  L  +   +   PD + Y+ LI G  +    ++A  +   +   G
Sbjct: 441 ILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKG 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNM 236
            +LD+ AYT ++ G    G   EA  L  +M   G +PD    EI+ +SL KK  +  +M
Sbjct: 501 YNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK--DENDM 558

Query: 237 DEAIELQNEMMGRGL 251
            E  +L  EM+ RGL
Sbjct: 559 AE--KLLREMIARGL 571



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 128/253 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +NIK D+  +  ++   C + K ++ K +   M + G+  N V   +LMD Y    E ++
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNK 348

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+ + M    +   + ++ ++I+G CK     EA++ F  M    + P+V  Y++LID
Sbjct: 349 AKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLID 408

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K   I  A  L D+M  R + P+   Y +++D   K     +A+ L  +  + G   
Sbjct: 409 GLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D++ Y+ L+ GL + G L++AR +F +++ +G   D      +++     G  +EA+ L 
Sbjct: 469 DISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528

Query: 244 NEMMGRGLLSGSK 256
           ++M   G +  +K
Sbjct: 529 SKMEDNGCIPDAK 541



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + IK +L     +I   C       +  + +++ + G   +T+  TTL       G+
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A    D+++        +++  LI GLCK G  R A+D   R+    + PNV +Y  
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID +CK   +  A +LF EM  + + PD   Y+ALI G+      K+A++L N+M    
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  +  LV    + G ++E + +F  M+ +GI P+ +   SL+  +     +++A 
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350

Query: 241 ELQNEMMGRGL 251
            + N M   G+
Sbjct: 351 SIFNTMAQGGV 361



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 111/236 (47%), Gaps = 1/236 (0%)

Query: 17  IWGLCIESKFEDSKLLLSE-MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I G  ++SK   + L LS+ M+  G+  N V C  L++ + + G    A S+  ++L   
Sbjct: 91  ILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMG 150

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
                +TF  L  GLC  G +++A  +  ++   G H +   Y  LI GLCK      A 
Sbjct: 151 YVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAAL 210

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
           +L   +    + P+   Y  +ID   K +   EA +L + M   G+  D+  Y++L+ G 
Sbjct: 211 DLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGF 270

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              G L++A  LF++MI   I PD      L+    + G M E   + + MM +G+
Sbjct: 271 CILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 2/200 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI  D+  Y ++I GL    +   +  L+ +M + G+  N     +++DA  K  +
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQ 450

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++LL +  D   +  + T+ +LI GLC+SG + +A   F  +   G + +V  YT 
Sbjct: 451 VDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTI 510

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C +     A  L  +M     IPD   Y  +I    K +    A  L   M   G
Sbjct: 511 MIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570

Query: 181 VDLDLNAYTSLVWGLSRCGH 200
             L LN Y   +  L++  H
Sbjct: 571 --LPLNFYDLYLTRLAQTWH 588



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 101/221 (45%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           +D+  L + +     T        ++ +  K+      L L  +M    I+  +V   +L
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I+  C+ GL+  A   F ++   G  P+   +T L  GLC K  I++A    D++     
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGF 186

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
             D  +Y  LI G  K    + AL+L  R+    V  ++  Y +++  + +   + EA  
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           LF EM+ +GI PD +   +L+      G + +AI+L N+M+
Sbjct: 247 LFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/246 (20%), Positives = 107/246 (43%), Gaps = 4/246 (1%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLL----LSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           LP Y  +     +  KF+  + L     + +  +    N +  ++    +    +  +A+
Sbjct: 11  LPRYCVVPDSHFVPKKFQSFQFLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAV 70

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL + +L          F  ++  L KS      +    +M   G+ PN+     LI+  
Sbjct: 71  SLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCF 130

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   I  A ++F ++ K   +PDT  +T L  G       ++A    +++  +G   D 
Sbjct: 131 CQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQ 190

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            +Y +L+ GL + G  + A  L   + G  + P+ ++  +++    +   ++EA +L +E
Sbjct: 191 ISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSE 250

Query: 246 MMGRGL 251
           M+ +G+
Sbjct: 251 MVSKGI 256


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 114/219 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D  ++ T+I G C +     ++ L  EM++ GL A+ V  T L++   +AGE
Sbjct: 348 MTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGE 407

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L EM+D  ++V VVT+ VLIDG CK G + EA      M    + PNV  YTA
Sbjct: 408 LKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTA 467

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L DGLCK+  +  A  L  EM  + +  +   Y +LI+G  K  + ++A+ +   M   G
Sbjct: 468 LSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAG 527

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              D+  YT+L+  L + G    A  +  EM+ +GI P 
Sbjct: 528 HRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPS 566



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++++  +Y ++I  LC + +  D+  +L +M  +G+  + V+ TT++  +   G+
Sbjct: 313 MAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGD 372

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L +EM    +    VT   LI+GLC++G ++EA      M D GL  +V  YT 
Sbjct: 373 LAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTV 432

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +  A  + +EM  R + P+   YTAL DG  K    + A  L + M   G
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++L++  Y SL+ GL + G+L++A  +  EM   G   D     +L+    + G  D A 
Sbjct: 493 LELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAH 552

Query: 241 ELQNEMMGRGL 251
            +  EM+ +G+
Sbjct: 553 NMLQEMLDKGI 563



 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 122/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + + AD   +  +I GLC   + +++  +L EM + GL  + V  T L+D Y K G 
Sbjct: 383 MQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGN 442

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + +EM+  R+   VVT+  L DGLCK G VR A +    M + GL  NV  Y +
Sbjct: 443 MVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNS 502

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +E+A  +  EM       D   YT LID   K   F  A N+   M + G
Sbjct: 503 LINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG 562

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  L+ G    G ++  + L   M+ + + P+ +   SL+K++    NM    
Sbjct: 563 IKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTT 622

Query: 241 ELQNEMMGR 249
           E+   M  +
Sbjct: 623 EIYKGMHSQ 631



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 124/242 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  YGT++ G C+  + E++  LL EM   GL +N  + T+++      G+ S+AL +L
Sbjct: 286 DVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVL 345

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M    + +  V F  +I G C  G +  A   F  M   GL  +   +TALI+GLC+ 
Sbjct: 346 EDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRA 405

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  +  EM  + +  D   YT LIDGY K  +  EA  + N M    V  ++  Y
Sbjct: 406 GELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTY 465

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L  GL + G ++ A  L HEM  +G+  +     SL+    + GN+++A+ +  EM  
Sbjct: 466 TALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEA 525

Query: 249 RG 250
            G
Sbjct: 526 AG 527



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 124/247 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y ++I GLC     E +  +++EM+  G   +    TTL+D   K+GE
Sbjct: 488 MCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGE 547

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++L EMLD  I+ ++ T+ VL++G C SG V         M +  + PNV  Y +
Sbjct: 548 FDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNS 607

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C    ++    ++  M  +++ P+   Y  LI G+ K  + KEAL     M E G
Sbjct: 608 LMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKG 667

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L  ++Y++L+  L++     EARV F +M   G+  +  +    +   +   N++  I
Sbjct: 668 LRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTI 727

Query: 241 ELQNEMM 247
            L +E++
Sbjct: 728 TLCDELV 734



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 119/239 (49%), Gaps = 3/239 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  L    + +D+     EM       + V   T++  Y   GE   A+ LLDEM 
Sbjct: 258 HNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGTMVHGYCVRGELENAVKLLDEMA 314

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +E     +  +I  LC  G V +A+     M   G+  +  V+T +I G C K  + 
Sbjct: 315 AKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLA 374

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR LF+EM KR +  D   +TALI+G  +    KEA  +   M + G+D+D+  YT L+
Sbjct: 375 AARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLI 434

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G++ EA  + +EM+GR + P+ +   +L     ++G++  A EL +EM  +GL
Sbjct: 435 DGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGL 493



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 11/223 (4%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           S  LL  +++ GL+ +   C  ++          EA++L  E+ D      V +  +L+ 
Sbjct: 212 SAELLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALFRELPDK----NVCSHNILLK 263

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            L  +G +++A  +F  M      P+V  Y  ++ G C +  +E A  L DEM  + +  
Sbjct: 264 ALLSAGRLKDACQHFDEMSS---PPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLES 320

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           + T YT++I          +AL +   MT  GV LD   +T+++ G    G L  AR LF
Sbjct: 321 NATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLF 380

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM  RG+  D +   +L+      G + EA  +  EM+ +GL
Sbjct: 381 EEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGL 423



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 76/180 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK  +  Y  ++ G C+  + E  K LL  M E  +  N V   +LM  Y     
Sbjct: 558 MLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKN 617

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 +   M    +     T+ +LI G CK+  ++EA+ +   M + GL    + Y+A
Sbjct: 618 MKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSA 677

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L KK     AR  FD+M    +  +   Y+  +D     ++ +  + L + + E  
Sbjct: 678 LIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEAS 737


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 127/246 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G   K ++  Y TII G       E ++ +L  M+  G+  ++    +L+    K G 
Sbjct: 275 MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR 334

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D+M++  +    VT+  LIDG C  G +  A  Y   M   G+ P+V+ Y  
Sbjct: 335 LEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNL 394

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+  L  +  +  A ++  EM K+ +IPD   Y  LI+GY +  + K+A +L N M   G
Sbjct: 395 LVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKG 454

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++     YTSL++ LSR   ++EA  LF +++ +G+ PD I+  +++  H   GN++ A 
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 514

Query: 241 ELQNEM 246
            L  EM
Sbjct: 515 MLLKEM 520



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 137/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D   YG++I G+C E + E++  L  +M E GL  N V   TL+D Y   G+
Sbjct: 310 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 369

Query: 61  PSEALSLLDEMLDSRIEVTV-----------------------------------VTFCV 85
              A S  DEM+   I  +V                                   +T+ +
Sbjct: 370 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 429

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+G  + G  ++A D    M   G+ P    YT+LI  L ++N ++ A +LF+++  + 
Sbjct: 430 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 489

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   + A++DG+  + + + A  L   M    V  D   + +L+ G  R G ++EAR
Sbjct: 490 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 549

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L  EM  RGI PD I   +L+  +  RG++ +A  +++EM+  G 
Sbjct: 550 MLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGF 595



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 121/246 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I + +  +  ++  LC E K + ++  +  M+  G   N V   T++  Y   G    A 
Sbjct: 245 ISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGAR 304

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +LD M    IE    T+  LI G+CK G + EA   F +M + GL PN   Y  LIDG 
Sbjct: 305 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 364

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C K  +ERA +  DEM K+ ++P  + Y  L+          EA ++   M + G+  D 
Sbjct: 365 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 424

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ G SRCG+ ++A  L +EM+ +GI P  +   SL+     R  M EA +L  +
Sbjct: 425 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 484

Query: 246 MMGRGL 251
           ++ +G+
Sbjct: 485 ILDQGV 490



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   +  Y  ++  L +E +  ++  ++ EM++ G+  + +    L++ Y + G 
Sbjct: 380 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 439

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L +EML   IE T VT+  LI  L +   ++EA D F ++ D G+ P+V ++ A
Sbjct: 440 AKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 499

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG C    +ERA  L  EM ++ + PD   +  L+ G  +    +EA  L + M   G
Sbjct: 500 MVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRG 559

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D  +Y +L+ G  R G +++A  +  EM+  G  P  +   +L+K   +    D A 
Sbjct: 560 IKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE 619

Query: 241 ELQNEMMGRGL 251
           EL  EM+ +G+
Sbjct: 620 ELLKEMVNKGI 630



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 35/251 (13%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           MKE G+      C  ++  + K      A  L  EM   RI  TV TF ++++ LCK G 
Sbjct: 205 MKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGK 264

Query: 96  VREAIDYFGRMPDFGLHPNVAVYT-----------------------------------A 120
           +++A ++ G M   G  PNV  Y                                    +
Sbjct: 265 LKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGS 324

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G+CK+  +E A  LFD+M +  ++P+   Y  LIDGY      + A + ++ M + G
Sbjct: 325 LISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKG 384

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   ++ Y  LV  L   G + EA  +  EM  +GI+PD I    L+  +   GN  +A 
Sbjct: 385 IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAF 444

Query: 241 ELQNEMMGRGL 251
           +L NEM+ +G+
Sbjct: 445 DLHNEMLSKGI 455



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 3/192 (1%)

Query: 67  LLDEMLDSRIEVTV---VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           L DE+  SR  ++V   + F +L+   C+     EA   F  M + G+ P +     ++ 
Sbjct: 163 LFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS 222

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
              K N +E A  L+ EM +  +      +  +++   K    K+A      M  +G   
Sbjct: 223 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKP 282

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++ +Y +++ G S  G+++ AR +   M  +GI PD     SL+    + G ++EA  L 
Sbjct: 283 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 342

Query: 244 NEMMGRGLLSGS 255
           ++M+  GL+  +
Sbjct: 343 DKMVEIGLVPNA 354


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 35/284 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + D+  + T++ GLC E +  +++ L+  M ENG   N V   T+++   K G+
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL+LL +M +S I+  VV +  +ID LCK G   +A + F  M D G+ PNV  Y  
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 121 LIDGLC-----------------------------------KKNCIERARNLFDEMPKRD 145
           +IDG C                                   K+  I  A  L+ EM  R+
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PDT  Y +LIDG+ KH    +A ++ + M   G   ++    +L+ G  R   + +  
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L HEM+ RG++PD +   +L+    + G+++ A +L  EM+ +
Sbjct: 241 KLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQ 284


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y  +I GLC   KF ++K +L EMK  G+T +    + L+    KA +
Sbjct: 275 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADK 334

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L  M  S     VV +  +I   CKSG + EA      M      P+V  Y  
Sbjct: 335 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 394

Query: 121 LIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +IDGLCK   I  A+ + ++M +  D++PD   Y+ +I+G  K +   EA  L +RM + 
Sbjct: 395 VIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKA 454

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G + D+  YT+++ GL +CG L+EA  L   M   G  P+ +   +L+    +   +DEA
Sbjct: 455 GCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEA 514

Query: 240 IELQNEMMGRG 250
             +  EM   G
Sbjct: 515 ERVMEEMRNAG 525



 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 126/247 (51%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  D   Y  +I GLC   K E+++ +L  M  +G T + V+ ++++ A+ K+G+
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 369

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYT 119
             EA   L EM   R    VVT+  +IDGLCK G + EA     +M + G + P+V  Y+
Sbjct: 370 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYS 429

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I+GLCK + +  A+ L D M K    PD   YT +IDG  K    +EA  L   M   
Sbjct: 430 TVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRA 489

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   ++  YT+L+ GL +   + EA  +  EM   G  P+ +   +++      G + EA
Sbjct: 490 GCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEA 549

Query: 240 IELQNEM 246
            +L   M
Sbjct: 550 QQLVQRM 556



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 112/214 (52%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           +  ++  G   N V  T L+ A+ +A +  EA+ LL+EM +      +VT+ VL+D LCK
Sbjct: 167 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
             +V  A D   +M + G  PNV  + +L+DG CK+  ++ AR L   M  + M P+   
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 286

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y+ALIDG  K + F EA  +   M   GV  D   Y++L+ GL +   ++EA  +   M 
Sbjct: 287 YSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 346

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           G G  PD ++  S++    + G + EA +   EM
Sbjct: 347 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEM 380



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 115/238 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I       K E++  LL EM+E G   N V    L+DA  K      A  ++ +M+
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 241

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      V+TF  L+DG CK G V +A    G M   G+ PNV  Y+ALIDGLCK     
Sbjct: 242 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 301

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ + +EM  R + PD   Y+ALI G  K +  +EA  +  RM   G   D+  Y+S++
Sbjct: 302 EAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 361

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               + G L EA+    EM  +   PD +   +++    + G + EA  +  +M   G
Sbjct: 362 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    +L  Y  ++  LC  S    ++ ++ +M E G   N +   +L+D + K G 
Sbjct: 205 MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGN 264

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL  M+   +   VVT+  LIDGLCKS    EA +    M   G+ P+   Y+A
Sbjct: 265 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSA 324

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK + IE A  +   M      PD   Y+++I  + K     EA      M +  
Sbjct: 325 LIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQR 384

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG-ILPDEILCISLLKKHYERGNMDEA 239
              D+  Y +++ GL + G + EA+V+  +M   G +LPD +   +++    +   + EA
Sbjct: 385 KSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEA 444

Query: 240 IELQNEMMGRG 250
            +L + M   G
Sbjct: 445 QKLLDRMCKAG 455



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 3/214 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M+ +    D+  Y T+I GLC   K  +++++L +M+E+G +  + V  +T+++   K+ 
Sbjct: 380 MRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSD 439

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA  LLD M  +     VVT+  +IDGLCK G + EA      M   G  PNV  YT
Sbjct: 440 MLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYT 499

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LI GLCK   ++ A  + +EM      P+   Y  +++G       KEA  L  RM + 
Sbjct: 500 TLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDG 559

Query: 180 GVDL--DLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             +   D   Y ++V  L     +QEA  L  +M
Sbjct: 560 RAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 3/242 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I G C       +  LL EMK  G   +    T ++ A   AG+   A+  L
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHL 170

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M     +  VVT+  LI    ++  + EA+     M + G  PN+  Y  L+D LCK 
Sbjct: 171 RSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL 227

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + +  A+++  +M +    P+   + +L+DG+ K  +  +A  L   M   G+  ++  Y
Sbjct: 228 SMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTY 287

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           ++L+ GL +     EA+ +  EM  RG+ PD     +L+    +   ++EA ++   M G
Sbjct: 288 SALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG 347

Query: 249 RG 250
            G
Sbjct: 348 SG 349



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 3/201 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++  +  AG+   AL LL+EM  +       T   +I  +  +G +  A+D+   M   G
Sbjct: 118 VISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---G 174

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PNV  YTALI    +   +E A  L +EM +R   P+   Y  L+D   K      A 
Sbjct: 175 CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQ 234

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           ++  +M E G   ++  + SLV G  + G++ +AR L   M+ +G+ P+ +   +L+   
Sbjct: 235 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 294

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            +     EA E+  EM  RG+
Sbjct: 295 CKSQKFLEAKEVLEEMKTRGV 315



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 32/205 (15%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           T  ++  L+  L +    REA D F         P+V  Y  +I G C    +  A  L 
Sbjct: 76  TAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELL 135

Query: 139 DEMPKRDMIPDT--------------------------------TAYTALIDGYLKHESF 166
           +EM      PD                                   YTALI  + + +  
Sbjct: 136 EEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKL 195

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           +EA+ L   M E G   +L  Y  LV  L +   +  A+ +  +MI  G  P+ +   SL
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255

Query: 227 LKKHYERGNMDEAIELQNEMMGRGL 251
           +    +RGN+D+A +L   M+ +G+
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGM 280


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 133/248 (53%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ +  +Y T+I G+  +    D+  L SEM    ++ + V  + L+  +F  G+  
Sbjct: 201 GKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLK 260

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L ++M+   I+  V TF +L+DG CK G +++A +    M    + PNV+ +  L+
Sbjct: 261 DAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLV 320

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG CK   ++  + +F  M K+ + P+   Y +L+DGY   +   +A  + N M++ GV 
Sbjct: 321 DGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVT 380

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++++Y  ++ G  +   + +A  LF EM  + I+PD +   SL+    + G +  A +L
Sbjct: 381 ANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQL 440

Query: 243 QNEMMGRG 250
            NEM  RG
Sbjct: 441 VNEMHDRG 448



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 113/227 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y  +I G  I  K +D+  L ++M    +  +      L+D + K G 
Sbjct: 234 MVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGR 293

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A ++LD M+   I+  V TF  L+DG CK   ++E    F  M   G+ PNV  Y +
Sbjct: 294 LKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCS 353

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C    + +A+ +F+ M +R +  +  +Y  +I+G+ K +   +A+ L   M    
Sbjct: 354 LMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKH 413

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +  D+  Y SL+ GL + G +  A  L +EM  RG  P+ I   S+L
Sbjct: 414 IIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSIL 460



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 108/214 (50%), Gaps = 12/214 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++IK ++  + T++ G C + K ++ K + + M + G+  N V   +LMD Y    +
Sbjct: 304 MMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQ 363

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  + + M    +   V ++ ++I+G CK   V +A+  F  M    + P+V  Y +
Sbjct: 364 VNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNS 423

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I  A  L +EM  R   P+   Y ++++  L             ++ + G
Sbjct: 424 LIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALL------------TKLKDQG 471

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +  +++  T L+ GL + G L+ AR +F +++ +
Sbjct: 472 IQPNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 120/243 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+    T I G C++ +   +     ++   G   + V   TL++   K GE   AL LL
Sbjct: 137 DIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLL 196

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    +++  V +  +IDG+ K   V +A D +  M    + P+V  Y+ALI G    
Sbjct: 197 RRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIV 256

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A +LF++M   ++ PD   +  L+DG+ K    K+A N+ + M    +  +++ +
Sbjct: 257 GKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTF 316

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +LV G  +   ++E + +F  M+ +GI P+ +   SL+  +     +++A ++ N M  
Sbjct: 317 NTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQ 376

Query: 249 RGL 251
           RG+
Sbjct: 377 RGV 379



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 96/197 (48%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++ +  K+      LSL  +M    I    VTF +LI+  C+ GL+  A     ++   G
Sbjct: 74  ILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMG 133

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P++      I G C K  I +A N  D++       D  +Y  LI+G  K    + AL
Sbjct: 134 YEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 193

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L  R+    V L+   Y +++ G+S+  H+ +A  L+ EM+ + I PD +   +L++  
Sbjct: 194 QLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGF 253

Query: 231 YERGNMDEAIELQNEMM 247
           +  G + +AI+L N+M+
Sbjct: 254 FIVGKLKDAIDLFNKMI 270



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 110/232 (47%), Gaps = 1/232 (0%)

Query: 17  IWGLCIESKFEDSKLLLSE-MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I G  ++SK   + L LS+ M+  G+  N V    L++ + + G    A S+L ++L   
Sbjct: 74  ILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMG 133

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
            E  ++T    I G C  G + +A+++  ++   G H +   Y  LI+GLCK      A 
Sbjct: 134 YEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAAL 193

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L   +  + +  +   Y  +IDG  K +   +A +L + M    +  D+  Y++L+ G 
Sbjct: 194 QLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGF 253

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
              G L++A  LF++MI   I PD      L+    + G + +A  + + MM
Sbjct: 254 FIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMM 305



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 109/220 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+++ + G   + +   T +  +   G+  +AL+  D+++     +  V++  LI+GLC
Sbjct: 125 VLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLC 184

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G  R A+    R+    +  N  +Y  +IDG+ K   +  A +L+ EM  + + PD  
Sbjct: 185 KVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVV 244

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ALI G+      K+A++L N+M    +  D+  +  LV G  + G L++A+ +   M
Sbjct: 245 TYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMM 304

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + + I P+     +L+    +   M E   +   MM +G+
Sbjct: 305 MIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGI 344



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 90/194 (46%)

Query: 56  FKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
           F + +   A+SL + +L     +T   F  ++  L KS      +    +M   G++PN 
Sbjct: 44  FHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNF 103

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             +  LI+  C+   I  A ++  ++ K    PD       I G+       +ALN  ++
Sbjct: 104 VTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDK 163

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           +  +G  LD  +Y +L+ GL + G  + A  L   + G+ +  + ++  +++    +  +
Sbjct: 164 LVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKH 223

Query: 236 MDEAIELQNEMMGR 249
           +++A +L +EM+ +
Sbjct: 224 VNDAFDLYSEMVAK 237


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  132 bits (331), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ G+C E + +++   L+ M   G   N +    ++ +    G 
Sbjct: 42  MGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGR 101

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL EM+      +VVTF +LI+ LC+ GL+  AID   +MP  G  PN   Y  
Sbjct: 102 WMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNP 161

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK+  ++RA    + M  R   PD   Y  ++    K      A+ L N+++  G
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L  Y +++ GLS+ G   +A  L HEM G+G+ PD I   SL+      G ++EAI
Sbjct: 222 CSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAI 281

Query: 241 ELQNEMMGRGL 251
           +  +++ G G+
Sbjct: 282 KFFHDVEGFGV 292



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 115/248 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K    D+  Y  +I   C ES    +  LL EM   G   + V    L++   K G   E
Sbjct: 10  KECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDE 69

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+  L+ M     +  V+T  +++  +C +G   +A      M   G  P+V  +  LI+
Sbjct: 70  AIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILIN 129

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LC+K  + RA ++ ++MP     P++ +Y  L+ G+ K +    A+     M   G   
Sbjct: 130 FLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYP 189

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y +++  L + G +  A  L +++  +G  P  I   +++    + G  D+A+EL 
Sbjct: 190 DIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELL 249

Query: 244 NEMMGRGL 251
           +EM G+GL
Sbjct: 250 HEMRGKGL 257



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 91/181 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y T++  LC + K + +  LL+++   G +   +   T++D   K G+
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL EM    ++  V+T+  LI GL + G V EAI +F  +  FG+ PN   Y +
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS 301

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLCK    +RA +    M  +   P   +YT LI+G       KEAL L N +   G
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361

Query: 181 V 181
           V
Sbjct: 362 V 362



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 116/255 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K     +  +  +I  LC +     +  +L +M  +G T N++    L+  + K  +
Sbjct: 112 MVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKK 171

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+  L+ M+       +VT+  ++  LCK G V  A++   ++   G  P +  Y  
Sbjct: 172 MDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 231

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGL K    ++A  L  EM  + + PD   Y++LI G  +    +EA+   + +   G
Sbjct: 232 VIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG 291

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y S+++GL +      A      MI +G  P E+    L++     G   EA+
Sbjct: 292 VKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEAL 351

Query: 241 ELQNEMMGRGLLSGS 255
           EL NE+  RG++  S
Sbjct: 352 ELLNELCSRGVVKKS 366



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 78/186 (41%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + +LD  L+      V+T+ +LI+  C    V +A+     M   G  P+V  Y  L++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           +CK+  ++ A    + MP     P+   +  ++        + +A  L   M   G    
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  +  L+  L R G L  A  +  +M   G  P+ +    LL    +   MD AI+   
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 245 EMMGRG 250
            M+ RG
Sbjct: 181 IMVSRG 186



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 64/144 (44%)

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
           +P+V  YT LI+  C ++ + +A  L DEM  R   PD   Y  L++G  K     EA+ 
Sbjct: 13  YPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIK 72

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
             N M   G   ++  +  ++  +   G   +A  L  EM+ +G  P  +    L+    
Sbjct: 73  FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLC 132

Query: 232 ERGNMDEAIELQNEMMGRGLLSGS 255
            +G +  AI++  +M   G    S
Sbjct: 133 RKGLLGRAIDILEKMPTHGCTPNS 156


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 123/247 (49%), Gaps = 5/247 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y   I GLC   + +D+  LL +M E      TV  T L+D   KAG   EA+++L
Sbjct: 41  DYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVL 100

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M++     T+ T+ V+IDGL K+G V EA   F  M   G  P+  VYTALI GLCK 
Sbjct: 101 EQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKS 160

Query: 129 NCIERARNLFDEMPKRD----MIPDTTAYTALIDGYLKHESFKEALNL-KNRMTEVGVDL 183
              E A  L+ E   R      +PD   YT+LIDG  K     EA  +  +   E G   
Sbjct: 161 GKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIP 220

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D   YTS++ GL + G ++E    FHEM  RG  PD +   +L+    +   + +A  + 
Sbjct: 221 DAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVY 280

Query: 244 NEMMGRG 250
            +M+  G
Sbjct: 281 RQMLQSG 287



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 127/250 (50%), Gaps = 1/250 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +  + D   Y  +I G         +  +  +M ++G   +TV    ++D   KAG 
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA +    M +     TVVT+  L+DG C  G V  A++ F RM D G  PN+  Y  
Sbjct: 308 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 367

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH-ESFKEALNLKNRMTEV 179
           +I GLC+   + +A   F+++ +R + PD   + A + G  +  ++  + + L   M   
Sbjct: 368 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   +L++Y+ L+ G+ R G L+ A  +F EM+ RG+ PD ++  +L++     G +DEA
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487

Query: 240 IELQNEMMGR 249
           +E+  E+  R
Sbjct: 488 LEVFRELERR 497



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 122/255 (47%), Gaps = 5/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K     L  Y  +I GL    + E+++ +  +M  NG   +  + T L+    K+G+
Sbjct: 103 MVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGK 162

Query: 61  PSEALSLLDEMLDSRIEVT----VVTFCVLIDGLCKSGLVREAIDYF-GRMPDFGLHPNV 115
           P EA +L  E    +   T    VVT+  LIDGLCK+G + EA   F     + G  P+ 
Sbjct: 163 PEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDA 222

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             YT++IDGLCK   +E     F EM  R   PD   Y ALIDG++K +   +A  +  +
Sbjct: 223 VTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQ 282

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           M + G  +    Y  ++ GL + G + EA   F  M  RG +   +   +L+      GN
Sbjct: 283 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN 342

Query: 236 MDEAIELQNEMMGRG 250
           +  A+EL   M+ RG
Sbjct: 343 VSAAVELFRRMLDRG 357



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 11/250 (4%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +  +I GLC E + +++  +L      G   + V     +D   KA    +A  LL
Sbjct: 6   DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M + +   T VT+  L+DGL K+G + EA+    +M + G  P +  YT +IDGL K 
Sbjct: 66  KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK-------HESFKEALNLKNRMTEVGV 181
             +E AR +F +M      PD   YTALI G  K       +  +KEA   K+  T V  
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP- 184

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLF-HEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             D+  YTSL+ GL + G + EAR +F  E + RG +PD +   S++    + G ++E  
Sbjct: 185 --DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 241 ELQNEMMGRG 250
           E  +EM  RG
Sbjct: 243 ERFHEMRNRG 252



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 2/244 (0%)

Query: 9   DLPLYGTIIWGLCIESK-FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           D+  Y ++I GLC   +  E  ++   E  E G   + V  T+++D   K G   E    
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             EM +   E   VT+  LIDG  K+ ++ +A   + +M   G   +   Y  ++DGLCK
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +  A   F  M +R  +     Y+AL+DG+    +   A+ L  RM + G + +L +
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER-GNMDEAIELQNEM 246
           Y  ++ GL R G L +A   F +++ R + PD     + L    +R   + + +EL   M
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424

Query: 247 MGRG 250
           + +G
Sbjct: 425 VSQG 428



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 115/244 (47%), Gaps = 1/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y +II GLC   + E+      EM+  G   + V    L+D + KA    +A  + 
Sbjct: 221 DAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVY 280

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +ML S   V+ VT+ +++DGLCK+G V EA   F  M + G    V  Y+AL+DG C +
Sbjct: 281 RQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSE 340

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  LF  M  R   P+  +Y  +I G  +     +A     ++ +  +  D+  +
Sbjct: 341 GNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTF 400

Query: 189 TSLVWGL-SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            + + GL  R   + +   LF  M+ +G  P+      L+      G ++ A+E+  EM+
Sbjct: 401 NAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMV 460

Query: 248 GRGL 251
            RG+
Sbjct: 461 SRGV 464



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 106/242 (43%), Gaps = 37/242 (15%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+ GLC   +  ++      M+E G  A  V  + LMD +   G  S A+ L   ML
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 354

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF----------------- 109
           D   E  +V++ ++I GLC++G + +A  YF ++      PD                  
Sbjct: 355 DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTV 414

Query: 110 -------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
                        G  PN+  Y+ L+DG+C+   +E A  +F EM  R + PD   +  L
Sbjct: 415 SDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTL 474

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           I          EAL +  R  E     D  +Y SL+ GLSRC  ++EAR+L   M  +G 
Sbjct: 475 IRWLCIAGRVDEALEV-FRELERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGC 533

Query: 217 LP 218
            P
Sbjct: 534 AP 535



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 35/172 (20%)

Query: 113 PNVAVYTALIDGLCKK-------NCIERAR----------------------------NL 137
           P++  +T +I+GLC++       + +ERA                              L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSR 197
             +M ++  +P T  YTAL+DG LK     EA+ +  +M E G    L  YT ++ GLS+
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            G ++EAR +F +M+G G  PD  +  +L+K   + G  +EA  L  E   R
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANAR 176



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 50/103 (48%)

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
           PD  A+T +I+G  + +   EA ++  R    G + D   Y   + GL +   + +A  L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +M  +  LP  +   +L+    + G +DEA+ +  +M+ +G
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKG 107


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 134/249 (53%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ +  +Y T+I+G+C +    D+  L SEM   G++ N V  + L+  +F  G+  
Sbjct: 70  GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLK 129

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L ++++   I+    TF +L+DG CK   ++E    F  M   G+ P+V  Y +L+
Sbjct: 130 DAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLV 189

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG      +  A+++F+ M +  + PD  +Y  LI+G+ K +   +A+NL N M    + 
Sbjct: 190 DGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNII 249

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y SL+ GLS+ G +  A  L  +M  RG+ P+ +   S++   ++   +D+AI L
Sbjct: 250 PNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIAL 309

Query: 243 QNEMMGRGL 251
             +   +G+
Sbjct: 310 ITKFKDQGI 318



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 123/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  LL  +    +  N V+  T++    K    ++A  L  EM+
Sbjct: 45  YGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMV 104

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G    G +++AID F ++    + P+   +  L+DG CK   ++
Sbjct: 105 SKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMK 164

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + +F  M K+ +IPD   Y +L+DGY   +    A ++ N M + GV+ D+ +Y  L+
Sbjct: 165 EGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILI 224

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   + +A  LF+EM  + I+P+ +   SL+    + G +  A++L ++M  RG+
Sbjct: 225 NGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGV 283



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 107/208 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +NIK D   +  ++ G C + K ++ K + + M + G+  + V   +L+D Y    E + 
Sbjct: 141 ENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNT 200

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+ + M    +   + ++ +LI+G CK   V +A++ F  M    + PNV  Y +LID
Sbjct: 201 AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLID 260

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K   I  A  L D+M  R + P+   Y ++ID   K     +A+ L  +  + G+  
Sbjct: 261 GLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQP 320

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +  YT L+ GL + G L++AR +F ++
Sbjct: 321 SMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 103/212 (48%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   NT+   TL+      G+  +A    D+++     +  V++  LI GLCK G  R A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +D   R+    +  N  +Y  +I G+CK   +  A +L+ EM  + + P+   Y+ALI G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +      K+A++L N++    +  D   +  LV G  +   ++E + +F  M+ +GI+PD
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   SL+  +     ++ A  + N M   G+
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGV 213



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 88/172 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y +++ G  +  +   +K + + M + G+  +      L++ + K  +
Sbjct: 173 MMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKK 232

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L +EM    I   VVT+  LIDGL KSG +  A+    +M D G+ PN+  Y +
Sbjct: 233 VDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNS 292

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           +ID L K + +++A  L  +   + + P    YT LIDG  K    K+A N+
Sbjct: 293 IIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNI 344



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 60/103 (58%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI  ++  Y ++I GL    +   +  L+ +M + G+  N +   +++DA FK  +
Sbjct: 243 MHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQ 302

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
             +A++L+ +  D  I+ ++ T+ +LIDGLCK G +++A + F
Sbjct: 303 VDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIF 345


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 131/248 (52%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            +  + D   YGT+I GLC   + + +  LL  +    +  N V+ +T++D+  K    +
Sbjct: 156 AQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVN 215

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L  EM+  RI   VVT+  LI G C  G ++ A+D F RM    ++PNV  ++ LI
Sbjct: 216 DAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILI 275

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG CK+  +  A+N+   M K+++  D   Y +L+DGY   +   +A +L N M + GV 
Sbjct: 276 DGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVT 335

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ +Y+ ++ G  +   + EA  LF EM  + I P+ +   SL+    + G    A+EL
Sbjct: 336 PDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALEL 395

Query: 243 QNEMMGRG 250
            +EM  RG
Sbjct: 396 VDEMHDRG 403



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 129/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+K D+  Y +++ G C+  +   +K L + M + G+T +    + +++ + K   
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKM 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L +EM   +I   VVT+  L+DGLCKSG    A++    M D G   N+  Y +
Sbjct: 354 VDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS 413

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D +CK N +++A  L  ++ ++ + PD   YT LI+G  K     +A  +   +   G
Sbjct: 414 ILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKG 473

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YTSL+ G    G   E   +  +M   G +P+ I    L+   +E+   D+A 
Sbjct: 474 YSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAE 533

Query: 241 ELQNEMMGRGLL 252
           +L  EM+ RGLL
Sbjct: 534 KLLREMIARGLL 545



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 128/255 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   NI  ++  +  +I G C E K  ++K +L+ M +  +  + V   +LMD Y    +
Sbjct: 259 MISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQ 318

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A SL + M    +   V ++ ++I+G CK  +V EA+  F  M    + PNV  Y +
Sbjct: 319 VNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNS 378

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK      A  L DEM  R    +   Y +++D   K+    +A+ L  ++ E G
Sbjct: 379 LVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKG 438

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  YT L+ GL + G L +A+ +F +++ +G  P+     SL+     +G  DE +
Sbjct: 439 IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGL 498

Query: 241 ELQNEMMGRGLLSGS 255
            + ++M   G +  +
Sbjct: 499 AMLSKMKDNGCIPNA 513



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 128/250 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y ++I G C+  K + +  L + M  + +  N    + L+D + K G+
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L  M+   +++ VVT+  L+DG C    V +A   F  M   G+ P+V  Y+ 
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK   ++ A  LF+EM  + + P+   Y +L+DG  K      AL L + M + G
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y S++  + +  H+ +A VL  ++  +GI PD      L+    + G +D+A 
Sbjct: 404 QPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQ 463

Query: 241 ELQNEMMGRG 250
           ++  +++ +G
Sbjct: 464 KVFEDLLVKG 473



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 128/249 (51%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ ++ +Y TII  +C +    D+  L  EM    ++ + V  ++L+  +   G+  
Sbjct: 191 GKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLK 250

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A+ L + M+   I   V TF +LIDG CK G VREA +    M    +  +V  Y +L+
Sbjct: 251 YAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLM 310

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C    + +A++LF+ M +R + PD  +Y+ +I+G+ K +   EA+ L   M    + 
Sbjct: 311 DGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIF 370

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y SLV GL + G    A  L  EM  RG   + I   S+L    +  ++D+AI L
Sbjct: 371 PNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVL 430

Query: 243 QNEMMGRGL 251
             ++  +G+
Sbjct: 431 LTKIKEKGI 439



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 121/244 (49%), Gaps = 2/244 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K    D   +  +I GLC++ +   +     ++   G   + V   TL++   + GE   
Sbjct: 122 KGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKA 181

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ LL  +    +   VV +  +ID +CK  LV +A D +  M    + P+V  Y++LI 
Sbjct: 182 AVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLIS 241

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C    ++ A +LF+ M   ++ P+   ++ LIDG+ K    +EA N+   M +  V L
Sbjct: 242 GFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKL 301

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM-DEAIEL 242
           D+  Y SL+ G      + +A+ LF+ M  RG+ PD +   S++   + +  M DEA++L
Sbjct: 302 DVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPD-VWSYSIMINGFCKIKMVDEAMKL 360

Query: 243 QNEM 246
             EM
Sbjct: 361 FEEM 364



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 114/220 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           + +++ + G   + V  T L+      GE  +AL   D+++    ++  V++  LI+GLC
Sbjct: 115 VFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLC 174

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G  + A+    R+    + PNV +Y+ +ID +CK   +  A +L+ EM  + + PD  
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVV 234

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LI G+      K A++L NRM    ++ ++  ++ L+ G  + G ++EA+ +   M
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + + +  D +   SL+  +     +++A  L N M  RG+
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGV 334



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 24/109 (22%), Positives = 55/109 (50%)

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           K + IP    +  ++   LK + ++ AL+L  +M   G+  D      L+   S+ GH++
Sbjct: 51  KNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIK 110

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +  +F +++ +G  PD +    L+K    +G + +A+   ++++ +G 
Sbjct: 111 FSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGF 159


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 131/262 (50%), Gaps = 13/262 (4%)

Query: 2   KGKNIKADLPLYG---------TIIWGLCI---ESKFEDSKLLLSEMKENGLTANTVICT 49
           K +++  D+ +YG         T+I G C      K   +  +L EM EN ++ N     
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
            L+D ++K      ++ +  EMLD  ++  V+++  LI+GLC  G + EAI    +M   
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ PN+  Y ALI+G CK + ++ A ++F  +  +  +P T  Y  LID Y K     + 
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             LK  M   G+  D+  Y  L+ GL R G+++ A+ LF ++  +G LPD +    L++ 
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEG 479

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
           +  +G   +A  L  EM   GL
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGL 501



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 125/242 (51%), Gaps = 1/242 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  +L  +  +I G   +     S  +  EM +  +  N +   +L++     G+ SEA
Sbjct: 291 DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEA 350

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +S+ D+M+ + ++  ++T+  LI+G CK+ +++EA+D FG +   G  P   +Y  LID 
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK   I+    L +EM +  ++PD   Y  LI G  ++ + + A  L +++T  G+  D
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-D 469

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           L  +  L+ G  R G  ++A +L  EM   G+ P  +    ++K + + GN+  A  ++ 
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRT 529

Query: 245 EM 246
           +M
Sbjct: 530 QM 531



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 112/220 (50%), Gaps = 3/220 (1%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   + + C  LM A  K    ++   +  EM+  +I+  V TF V+I+ LCK+G + +A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCK---KNCIERARNLFDEMPKRDMIPDTTAYTAL 156
            D    M  +G  PNV  Y  LIDG CK      + +A  +  EM + D+ P+ T +  L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           IDG+ K ++   ++ +   M +  V  ++ +Y SL+ GL   G + EA  +  +M+  G+
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
            P+ I   +L+    +   + EA+++   + G+G +  ++
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 121/240 (50%), Gaps = 3/240 (1%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  L  E++  D + +  EM    +  N      +++A  K G+ ++A  ++++M    
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 76  IEVTVVTFCVLIDGLCK---SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               VV++  LIDG CK   +G + +A      M +  + PN+  +  LIDG  K + + 
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            +  +F EM  +D+ P+  +Y +LI+G        EA++++++M   GV  +L  Y +L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   L+EA  +F  + G+G +P   +   L+  + + G +D+   L+ EM   G++
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 18/220 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KG+       +Y  +I   C   K +D   L  EM+  G+  +      L+    + G 
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L D+ L S+    +VTF +L++G C+ G  R+A      M   GL P    Y  
Sbjct: 452 IEAAKKLFDQ-LTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510

Query: 121 LIDGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++ G CK+  ++ A N+  +M K R +  +  +Y  L+ GY +    ++A  L N M E 
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           G+  +   Y                 ++  EM+ +G +PD
Sbjct: 571 GLVPNRITY----------------EIVKEEMVDQGFVPD 594


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 136/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I+ D   YG++I G+C + + E++  +  EM + GL  + VI  TL+D +   G 
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341

Query: 61  PSEALSLLDEMLDSRIEVTV-----------------------------------VTFCV 85
              A +  DEML   I  T+                                   +T+ +
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+G C+    ++A      M   G+ P    YT+L+  L KKN ++ A +LF ++    
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++PD   + ALIDG+  + + K A  L   M  + V  D   + +++ G  R G ++EAR
Sbjct: 462 VLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            LF EM  RGI PD I   +L+  +  RG++ +A  ++NEM+  G 
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 120/247 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK+ +  +  +I  LC E K + +K  +  M+ +G+  N V   T++  Y  +G    A 
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           ++L  M   +IE    T+  LI G+CK G + EA   F  M   GL P+  +Y  LIDG 
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C K  ++ A    DEM K+ + P  + Y +LI      +   EA  +   + E G+  D 
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ G  RC + ++A +L  EM+  GI P +    SLL    ++  M EA +L  +
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 246 MMGRGLL 252
           +   G+L
Sbjct: 457 ITSEGVL 463



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 120/246 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K ++  Y TI+ G C   + E +  +L+ MK   +  ++    +L+    K G 
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + +EM+   +  + V +  LIDG C  G +  A  Y   M   G+ P ++ Y +
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L  +   + A  +  E+ ++ + PD   Y  LI+GY +  + K+A  L + M   G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTSL+  LS+   ++EA  LF ++   G+LPD I+  +L+  H    N+  A 
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAF 486

Query: 241 ELQNEM 246
           EL  +M
Sbjct: 487 ELLKDM 492



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 125/263 (47%), Gaps = 35/263 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   +  Y ++I  L +E + ++++ ++ E++E G++ + +    L++ Y +   
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L DEML S I+ T  T+  L+  L K   ++EA D F ++   G+ P+  ++ A
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNA 471

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           LID                                   G C++  +E AR LFDEM +R 
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD  ++  LI GY +    K+A  ++N M + G +  +  Y +LV GL +      A 
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE 591

Query: 206 VLFHEMIGRGILPDEILCISLLK 228
            L  EM+ +G+ PD+    +L++
Sbjct: 592 ELLKEMVSKGMTPDDTTYFTLIE 614



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 35/280 (12%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++  +I   C  ++ +++      MKE G+      C +L+  + K      A  L  EM
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT------------ 119
              RI+ +V TF ++I+ LCK G +++A D+ G M   G+ PN+  Y             
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 120 -----------------------ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
                                  +LI G+CK+  +E A  +F+EM ++ + P    Y  L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           IDG+    +   A   K+ M + G+   ++ Y SL+  L       EA  +  E+  +GI
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
            PD I    L+  +    N  +A  L +EM+  G+    K
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  ++  +I G C  S  + +  LL +M    +  + V   T+M  + + G+  EA  L 
Sbjct: 465 DAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM    I+   ++F  LI G  + G +++A      M D G +P V  Y AL+ GLCK 
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
              + A  L  EM  + M PD T Y  LI+G  K
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   + TI+ G C E K E+++ L  EMK  G+  + +   TL+  Y + G+  +A 
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + +EMLD+    TV+T+  L+ GLCK+     A +    M   G+ P+   Y  LI+G+
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616

Query: 126 CKKNCIERARN 136
            K N  +  +N
Sbjct: 617 AKVNIPDENKN 627



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 88/197 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    IK     Y +++  L  +++ +++  L  ++   G+  + ++   L+D +     
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSN 481

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL +M   ++    VTF  ++ G C+ G V EA + F  M   G+ P+   +  
Sbjct: 482 VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNT 541

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  ++  I+ A  + +EM      P    Y AL+ G  K++    A  L   M   G
Sbjct: 542 LISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKG 601

Query: 181 VDLDLNAYTSLVWGLSR 197
           +  D   Y +L+ G+++
Sbjct: 602 MTPDDTTYFTLIEGIAK 618


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 135/247 (54%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KNIK D+  +  ++ GLC E + + ++ +L+ M + G+ +N V   +LMD YF   + ++
Sbjct: 268 KNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENK 327

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  + + M    +   V ++ ++I+GLCK+ +V EA++ F  M    + PN   Y +LID
Sbjct: 328 ATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLID 387

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K   I  A +L +EM  R    D   Y++L+D   K+    +A+ L  ++ + G+  
Sbjct: 388 GLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQP 447

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  YT LV GL + G L++A+ ++ +++ +G   D  +   ++    + G  DEA+ L 
Sbjct: 448 NIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLV 507

Query: 244 NEMMGRG 250
           ++M   G
Sbjct: 508 SKMEDNG 514



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 126/248 (50%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K    D   YGT+I GLC   +   +  +L ++    +  N V+  T++D+  K     
Sbjct: 162 AKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVI 221

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A  L  EM+  RI   VVT+  LI G    G ++EA+  F +M    + P+V  +  L+
Sbjct: 222 HASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILV 281

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK+  +++ARN+   M K+ +  +   Y +L+DGY   +   +A  + N M   GV 
Sbjct: 282 DGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVT 341

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ +Y+ ++ GL +   + EA  LF EM  + + P+ +   SL+    + G + +A +L
Sbjct: 342 PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDL 401

Query: 243 QNEMMGRG 250
            NEM  RG
Sbjct: 402 VNEMHNRG 409



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 125/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++ +Y TII  LC +     +  L SEM    +  + V  TTL+      G   EA+
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAV 259

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L ++ML   I+  V TF +L+DGLCK G +++A +    M   G+  N+  Y +L+DG 
Sbjct: 260 GLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGY 319

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
                  +A  +F+ M +R + PD  +Y+ +I+G  K +   EA+NL   M    +  + 
Sbjct: 320 FLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNT 379

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL+ GL + G + +A  L +EM  RG   D I   SLL    +   +D+AI L  +
Sbjct: 380 VTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITK 439

Query: 246 MMGRGL 251
           +  +G+
Sbjct: 440 IKDQGI 445



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 114/230 (49%), Gaps = 6/230 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y  +I GLC     +++  L  EM    +  NTV   +L+D   K G 
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L++EM +      V+T+  L+D LCK+  V +AI    ++ D G+ PN+  YT 
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   ++ A+ ++ ++  +    D   Y  +++G  K   F EAL+L ++M + G
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI------GRGILPDEILCI 224
              D   Y +LV  L       +A  L  EMI      G  I  + +LC+
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISSNSMLCV 564



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ DL  +  +I   C       +  +L+++ + G   +TV  TTL+      G+
Sbjct: 90  MELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGK 149

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL   D+++     +  V++  LI+GLCK+G  R A+    ++    + PNV +Y  
Sbjct: 150 VREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNT 209

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   +  A +L  EM  + + PD   YT LI G L     KEA+ L N+M    
Sbjct: 210 IIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKN 269

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  +  LV GL + G +++AR +   MI +G+  + +   SL+  ++     ++A 
Sbjct: 270 IKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKAT 329

Query: 241 ELQNEMMGRGL 251
            + N M  RG+
Sbjct: 330 FVFNTMARRGV 340



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 92/201 (45%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++ +  K      A+S   +M   +I+  + TF +LI+  C  G +  A     ++   G
Sbjct: 70  ILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLG 129

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
            HP+    T LI GLC    +  A +  D++  +    D  +Y  LI+G  K    + AL
Sbjct: 130 FHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAAL 189

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            +  ++  + V  ++  Y +++  L +   +  A  L  EMI + I PD +   +L+   
Sbjct: 190 QVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGC 249

Query: 231 YERGNMDEAIELQNEMMGRGL 251
              G + EA+ L N+M+ + +
Sbjct: 250 LIVGRLKEAVGLFNQMLLKNI 270


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 136/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I+ D   YG++I G+C + + E++  +  EM + GL  + VI  TL+D +   G 
Sbjct: 282 MKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGN 341

Query: 61  PSEALSLLDEMLDSRIEVTV-----------------------------------VTFCV 85
              A +  DEML   I  T+                                   +T+ +
Sbjct: 342 LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNI 401

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+G C+    ++A      M   G+ P    YT+L+  L KKN ++ A +LF ++    
Sbjct: 402 LINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++PD   + ALIDG+  + + K A  L   M  + V  D   + +++ G  R G ++EAR
Sbjct: 462 VLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            LF EM  RGI PD I   +L+  +  RG++ +A  ++NEM+  G 
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGF 567



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 120/247 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK+ +  +  +I  LC E K + +K  +  M+ +G+  N V   T++  Y  +G    A 
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           ++L  M   +IE    T+  LI G+CK G + EA   F  M   GL P+  +Y  LIDG 
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C K  ++ A    DEM K+ + P  + Y +LI      +   EA  +   + E G+  D 
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ G  RC + ++A +L  EM+  GI P +    SLL    ++  M EA +L  +
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 246 MMGRGLL 252
           +   G+L
Sbjct: 457 ITSEGVL 463



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 120/246 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K ++  Y TI+ G C   + E +  +L+ MK   +  ++    +L+    K G 
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + +EM+   +  + V +  LIDG C  G +  A  Y   M   G+ P ++ Y +
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L  +   + A  +  E+ ++ + PD   Y  LI+GY +  + K+A  L + M   G
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTSL+  LS+   ++EA  LF ++   G+LPD I+  +L+  H    N+  A 
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAF 486

Query: 241 ELQNEM 246
           EL  +M
Sbjct: 487 ELLKDM 492



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 126/263 (47%), Gaps = 35/263 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   +  Y ++I  L +E + ++++ ++ E++E G++ + +    L++ Y +   
Sbjct: 352 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L DEML S I+ T  T+  L+  L K   ++EA D F ++   G+ P+V ++ A
Sbjct: 412 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNA 471

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           LID                                   G C++  +E AR LFDEM +R 
Sbjct: 472 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD  ++  LI GY +    K+A  ++N M + G +  +  Y +LV GL +      A 
Sbjct: 532 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE 591

Query: 206 VLFHEMIGRGILPDEILCISLLK 228
            L  EM+ +G+ PD+    +L++
Sbjct: 592 ELLKEMVSKGMTPDDTTYFTLIE 614



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 35/280 (12%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++  +I   C  ++ +++      MKE G+      C +L+  + K      A  L  EM
Sbjct: 153 VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT------------ 119
              RI+ +V TF ++I+ LCK G +++A D+ G M   G+ PN+  Y             
Sbjct: 213 FRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRV 272

Query: 120 -----------------------ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
                                  +LI G+CK+  +E A  +F+EM ++ + P    Y  L
Sbjct: 273 EAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTL 332

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           IDG+    +   A   K+ M + G+   ++ Y SL+  L       EA  +  E+  +GI
Sbjct: 333 IDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
            PD I    L+  +    N  +A  L +EM+  G+    K
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ ++  +I G C  S  + +  LL +M    +  + V   T+M  + + G+  EA  L 
Sbjct: 465 DVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELF 524

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM    I+   ++F  LI G  + G +++A      M D G +P V  Y AL+ GLCK 
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
              + A  L  EM  + M PD T Y  LI+G  K
Sbjct: 585 QEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   + TI+ G C E K E+++ L  EMK  G+  + +   TL+  Y + G+  +A 
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + +EMLD+    TV+T+  L+ GLCK+     A +    M   G+ P+   Y  LI+G+
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616

Query: 126 CKKNCIERARN 136
            K N  +  +N
Sbjct: 617 AKVNIPDENKN 627



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 88/197 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    IK     Y +++  L  +++ +++  L  ++   G+  + ++   L+D +     
Sbjct: 422 MLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSN 481

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL +M   ++    VTF  ++ G C+ G V EA + F  M   G+ P+   +  
Sbjct: 482 VKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNT 541

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  ++  I+ A  + +EM      P    Y AL+ G  K++    A  L   M   G
Sbjct: 542 LISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKG 601

Query: 181 VDLDLNAYTSLVWGLSR 197
           +  D   Y +L+ G+++
Sbjct: 602 MTPDDTTYFTLIEGIAK 618


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 119/248 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   + +I+ GLC   KFE +  LL+ M E     +     TL+    K   
Sbjct: 287 MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 346

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+DE + S     VVT+ +L DGLCK G + EA +    M   G  PN+  Y  
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK +  E+A  L + +     +PD   YT ++DG  K     +AL +   M + G
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  YT+L+ GL R G + EA  +F EM+ +    D +  +SL+  + +     EA 
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526

Query: 241 ELQNEMMG 248
           ++ + + G
Sbjct: 527 KVVDGIRG 534



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 120/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y  +I GLC  SK + +  +L EM + G+T +TV   ++MD   KAG+
Sbjct: 252 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 311

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SLL  M +     +  T+  LI GLCK   V  A D        G  P+V  Y+ 
Sbjct: 312 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSI 371

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L DGLCK+  I+ A  L  EM  +   P+   Y  LIDG  K    ++A  L   +   G
Sbjct: 372 LADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YT +V GL + G L +A  +   M+ RG  P  I   +L++     G +DEA 
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 491

Query: 241 ELQNEMMGR 249
            +  EM+ +
Sbjct: 492 HIFKEMVSK 500



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 119/248 (47%), Gaps = 1/248 (0%)

Query: 4   KNIKA-DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           +NI + D   Y  II G C ++  + +   L EM E  +  +      L+D   KA +  
Sbjct: 219 RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTD 278

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  +L EM+D  +    VTF  ++DGLCK+G    A      M +    P+   Y  LI
Sbjct: 279 KASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLI 338

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GLCK+  ++RA++L DE      +PD   Y+ L DG  K     EA  L   M+  G  
Sbjct: 339 SGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCT 398

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +L  Y +L+ GL +    ++A  L   ++  G +PD +    ++    + G +D+A+++
Sbjct: 399 PNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKM 458

Query: 243 QNEMMGRG 250
              M+ RG
Sbjct: 459 VEGMLKRG 466



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 4/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+  AD   Y +++ G C  S+ ++++ ++  ++    T    +   LMD Y K G 
Sbjct: 497 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGR 553

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  ++ ++M        + T+ +++DGLCK G V EA  +   M   G  P+V  Y  
Sbjct: 554 LDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNI 613

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGL K +  + AR + D+M +  + PD   Y  L+  + K E F +A+ +   M + G
Sbjct: 614 IIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAG 673

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI-SLLKKHYERGNMDEA 239
           VD D   Y +L+ GLS+   L +A  L HEM+  G +        +++ +  + G + +A
Sbjct: 674 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQA 733

Query: 240 IELQNEMMGRGL 251
           + L + M G G+
Sbjct: 734 LLLMDHMTGHGV 745



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 4/238 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC  ++ + +  +L + K  G      + T L  A+ K G   +AL    E+ 
Sbjct: 163 YHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDAL----EIF 218

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +      + +  +I G C+      A+++   M +  + P+V  Y  LIDGLCK +  +
Sbjct: 219 RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTD 278

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  +  EM  R + PDT  + +++DG  K   F+ A +L   M E         Y +L+
Sbjct: 279 KASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLI 338

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL +  ++  A+ L  E +  G +PD +    L     +RG +DEA EL  EM G+G
Sbjct: 339 SGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKG 396



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 4/251 (1%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K +  K ++ +Y  +    C   + +D+     E+  N  + + +    ++  + +  + 
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDAL----EIFRNIPSPDAIAYNAIIHGHCRKNDC 242

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
             AL  L EM + ++   V T+ +LIDGLCK+    +A +    M D G+ P+   + ++
Sbjct: 243 DGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSI 302

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +DGLCK    ERA +L   M +R+  P    Y  LI G  K ++   A +L +     G 
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D+  Y+ L  GL + G + EA  L  EM G+G  P+ +   +L+    +    ++A E
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYE 422

Query: 242 LQNEMMGRGLL 252
           L   ++  G +
Sbjct: 423 LLESLVSSGFV 433



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 5/252 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D   Y T++   C E +F+D+  +L  M + G+  + V   TL+    +     +A 
Sbjct: 639 IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAY 698

Query: 66  SLLDEMLDSRIEVTV-VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
            L+ EML +   V+   T+  +ID LCK G +++A+     M   G+  N   Y   ID 
Sbjct: 699 ELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDR 758

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV-GVDL 183
           LCK+  ++ A +L  EM   D + D  +YT +I G  K E    A  L   M  V G+ +
Sbjct: 759 LCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCI 815

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
             + +  L+   ++   L EA  L   M+ RG  P  I    ++    +   +D+A EL 
Sbjct: 816 TSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELF 875

Query: 244 NEMMGRGLLSGS 255
           +EM  RG+++ S
Sbjct: 876 DEMAVRGIVASS 887



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 9/245 (3%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTT---LMDAYFKAGEPS 62
           +  D   Y T+I GL   ++  D+  L+ EM  NG   +   CTT   ++D   K G   
Sbjct: 674 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA--CTTYNTIIDRLCKEGCLK 731

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL L+D M    +E   VT+ + ID LCK G + EA      M    L   V+ YT +I
Sbjct: 732 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT--LRDEVS-YTTVI 788

Query: 123 DGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            GLCK   ++RA  L  EM   + +   +  +  LID + K +   EAL L   M + G 
Sbjct: 789 IGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGC 848

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
              +  Y  ++  L +   + +A  LF EM  RGI+   +    L+     +G   EA++
Sbjct: 849 SPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQ 908

Query: 242 LQNEM 246
           +  EM
Sbjct: 909 VLEEM 913



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 4/212 (1%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           + G   +T      +    + G      ++ + MLD+       T+ ++I  LC+   + 
Sbjct: 118 DRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQID 177

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +A     +    G  P V+VYT L    CK   ++ A  +F  +P     PD  AY A+I
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAII 233

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G+ +      AL     M E  V  D+  Y  L+ GL +     +A  + HEM+ RG+ 
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           PD +   S++    + G  + A  L   M  R
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAER 325



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 90/205 (43%), Gaps = 33/205 (16%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII  LC E   + + LL+  M  +G+ ANTV     +D   K G   EA SLL EM 
Sbjct: 717 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 776

Query: 73  DSRIEV---TVV------------------------------TFCVLIDGLCKSGLVREA 99
             R EV   TV+                              TF +LID   K+  + EA
Sbjct: 777 TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEA 836

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +   G M   G  P+V  Y  +I  LCK + +++A  LFDEM  R ++  + +YT LI G
Sbjct: 837 LTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYG 896

Query: 160 YLKHESFKEALNLKNRMTEVGVDLD 184
                  KEAL +   M     ++D
Sbjct: 897 LCGQGRGKEALQVLEEMASSDCEID 921


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 8/247 (3%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ ++ +Y TII G+C +    D+  L SEM   G++ N V  + L+  +F  G+  
Sbjct: 220 GKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLK 279

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L ++M+   I+  V TF +L+D  CKSG +  A+     M D G  PN+  Y++++
Sbjct: 280 DAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL 339

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK + +++A  L  ++  + + P+   YT LIDG       ++A N+   +   G D
Sbjct: 340 DALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYD 399

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNMDE 238
           + +  Y  + +G  + G   EA  L  +M   G +PD    E++ +SL KK    G  D 
Sbjct: 400 ITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKK----GENDM 455

Query: 239 AIELQNE 245
           A +L  E
Sbjct: 456 AEKLHRE 462



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 122/244 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  LL  +    +  N V+ +T++D   K    ++A  L  EM+
Sbjct: 195 YGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMV 254

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G    G +++A+D F +M    + P+V  +  L+D  CK   I 
Sbjct: 255 SKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKIS 314

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L DEM  R   P+   Y++++D   K     +A+ L  ++ + G+  +++ YT L+
Sbjct: 315 YALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILI 374

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL   G L++AR +F +++ +G     +  I +     ++G  DEA  L ++M   G +
Sbjct: 375 DGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCI 434

Query: 253 SGSK 256
             +K
Sbjct: 435 PDAK 438



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + IK +L     +I   C       +  + +++ + G   NT+  TTL+      G+
Sbjct: 113 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQ 172

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+  D+++    +   +++  LIDGLCK G  R A+D   R+    + PNV +Y+ 
Sbjct: 173 IHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYST 232

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG+CK   +  A +L+ EM  + + P+   Y+ALI G+      K+A++L N+M    
Sbjct: 233 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISEN 292

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  +  LV    + G +  A  L  EM  RG  P+ +   S+L    +   +D+A+
Sbjct: 293 IKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAV 352

Query: 241 ELQNEMMGRGL 251
            L  ++  +G+
Sbjct: 353 ALLTKLKDQGI 363



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 1/235 (0%)

Query: 17  IWGLCIESKFEDSKLLLSE-MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I G  ++SK   + L LS+ M+  G+  N V C  L++ + + G    A S+  ++L   
Sbjct: 93  ILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMG 152

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
                +TF  LI GLC  G + +A+++  ++   G   N   Y  LIDGLCK      A 
Sbjct: 153 YNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAAL 212

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
           +L   +  + + P+   Y+ +IDG  K +   +A +L + M   G+  ++  Y++L+ G 
Sbjct: 213 DLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 272

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              G L++A  LF++MI   I PD      L+    + G +  A++L +EM  RG
Sbjct: 273 FTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRG 327



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 110/225 (48%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           +D+  L + +     T   +    ++ +  K+      L L  +M    I+  +V   +L
Sbjct: 69  DDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNIL 128

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I+  C+ GL+  A   F ++   G +PN   +T LI GLC K  I +A N  D++     
Sbjct: 129 INCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGF 188

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
             +  +Y  LIDG  K    + AL+L  R+    V  ++  Y++++ G+ +  H+ +A  
Sbjct: 189 QFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFD 248

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L+ EM+ +GI P+ +   +L+   +  G + +A++L N+M+   +
Sbjct: 249 LYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENI 293



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/246 (20%), Positives = 110/246 (44%), Gaps = 4/246 (1%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLL----LSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           LP Y  +     +  KF   + L     + +  +    N +  ++    +    +  +A+
Sbjct: 13  LPSYYVVPVSHFVPKKFPSFQFLKNTHFNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAV 72

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL + +L        + F  ++  L KS      +    +M   G+ PN+     LI+  
Sbjct: 73  SLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCF 132

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   I  A ++F ++ K    P+T  +T LI G        +ALN  +++  +G   + 
Sbjct: 133 CQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQ 192

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            +Y +L+ GL + G  + A  L   + G+ + P+ ++  +++    +  ++++A +L +E
Sbjct: 193 ISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSE 252

Query: 246 MMGRGL 251
           M+ +G+
Sbjct: 253 MVSKGI 258


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  131 bits (330), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 111/206 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC + K  ++  +   M + G  AN  I T L+D+Y K G   EA+ L + M 
Sbjct: 328 YSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 387

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   E   VT+ VL++GLCKSG + + ++ F    + G+  N   Y +LIDGL K   IE
Sbjct: 388 NEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIE 447

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NLF+EM ++    D+  Y A+ID   KH    +AL L  RM E G D  +  +T L+
Sbjct: 448 DAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILI 507

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILP 218
            GL +    +EA   + +MI +GI P
Sbjct: 508 DGLFKEHKNEEAIKFWDKMIDKGITP 533



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 114/250 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D   Y  +I G C   K + +     +M+   +  + +   TL+ A +   +
Sbjct: 246 MDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERD 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               LSL  EM +  +E+   ++ ++I GLCK     EA   F  M   G   NVA+YTA
Sbjct: 306 FDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTA 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K   +E A  LF+ M      PD   Y+ L++G  K     + + L +     G
Sbjct: 366 LIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKG 425

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V ++   Y SL+ GL + G +++A  LF EM  +G   D     +++    + G +D+A+
Sbjct: 426 VAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQAL 485

Query: 241 ELQNEMMGRG 250
            L   M   G
Sbjct: 486 ALFGRMEEEG 495



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 1/214 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + K +  +   Y ++I GL    + ED++ L  EM E G   ++     ++DA  K G+ 
Sbjct: 422 RNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKI 481

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +AL+L   M +   + TV TF +LIDGL K     EAI ++ +M D G+ P VA + AL
Sbjct: 482 DQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRAL 541

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
             GLC    + RA  + D++    +IP+T A+  +I+   K +  KEA  L + + + G 
Sbjct: 542 AIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEACKLADGIVDRGR 600

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           ++     T L+  L + G+      L H  IG G
Sbjct: 601 EIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIG 634



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 104/222 (46%)

Query: 30  KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG 89
           +L+  E+K+ GL        +L+ ++   G   E L +   M ++ I+ ++ T+  L++G
Sbjct: 170 RLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNG 229

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L  S  +  A   F  M    + P+   Y  +I G CK   +++A   F +M  +++ PD
Sbjct: 230 LVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPD 289

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  LI        F   L+L   M E G+++  ++Y+ ++ GL +     EA  +F 
Sbjct: 290 KITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFE 349

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            M  +G   +  +  +L+  + + G+M+EA+ L   M   G 
Sbjct: 350 TMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGF 391



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 111/250 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I   L  Y  ++ GL      E ++ +   M    +  +TV    ++  Y KAG+
Sbjct: 211 MKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGK 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+    +M    ++   +T+  LI            +  +  M + GL      Y+ 
Sbjct: 271 LQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSL 330

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK+     A  +F+ M ++    +   YTALID Y K+ S +EA+ L  RM   G
Sbjct: 331 VIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEG 390

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D   Y+ LV GL + G L +   LF     +G+  + +   SL+    + G +++A 
Sbjct: 391 FEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAE 450

Query: 241 ELQNEMMGRG 250
            L  EM  +G
Sbjct: 451 NLFEEMSEKG 460



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 64/132 (48%)

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           +  + +LI+ L     + + R +F E+  R ++   +A  +LI  +      +E L +  
Sbjct: 150 IECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWR 209

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
           RM E G+D  L  Y  LV GL     ++ A  +F  M G  I+PD +    ++K + + G
Sbjct: 210 RMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAG 269

Query: 235 NMDEAIELQNEM 246
            + +A+E   +M
Sbjct: 270 KLQKAMEKFRDM 281


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 128/241 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K DL  Y  +I G C     E++  L  ++  +G   N ++ + L+ +  K G+  EAL
Sbjct: 287 LKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEAL 346

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL EM  + ++  +VT+ +LI GLCK G V++AI  +  M    + PN   ++ ++ GL
Sbjct: 347 QLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGL 406

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+K  +  AR  FD +   ++ PD T Y  +IDGY+K    +EA+ L  R+ +  +   +
Sbjct: 407 CEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSI 466

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             + SL++G  +   + EAR L   +   G+ P  +   +L+  + E GN+++  EL  E
Sbjct: 467 VTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLE 526

Query: 246 M 246
           M
Sbjct: 527 M 527



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 111/216 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ K I   +  + ++I+G C   K  +++ LL  +K +GL  + V  TTLM+AY + G 
Sbjct: 457 LRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGN 516

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++   LL EM    IE TVVT+ V+I GLCK   + E++     M   GL P+   Y  
Sbjct: 517 INKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNT 576

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   CK   + +A  L D+M   ++ P    Y  LIDG  ++   ++A  +   + +  
Sbjct: 577 IIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRN 636

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           ++L   AYT+++      G  Q A  +FH+M+ +G 
Sbjct: 637 INLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGF 672



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N++ DL  Y  +I GLC + K + +  L  EM  N +  N+   + ++    + G 
Sbjct: 352 MEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGM 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A    D ++ S +   V  + ++IDG  K G V EA+  + R+ D  + P++  + +
Sbjct: 412 LSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNS 471

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +  AR L + +    + P    YT L++ Y +  +  +   L   M    
Sbjct: 472 LIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKD 531

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++  +  YT ++ GL +   L+E+  L  +M  +G+ PD+I   ++++   +  +M +A 
Sbjct: 532 IEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAF 591

Query: 241 ELQNEMMGRGL 251
           EL ++M+   L
Sbjct: 592 ELLDDMLIHNL 602



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 104/219 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+I+  +  Y  +I GLC + K E+S  LL +M+  GL  + +   T++  + KA +
Sbjct: 527 MNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKD 586

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LLD+ML   +E T  T+ VLIDGLC+ G V +A      + D  ++     YT 
Sbjct: 587 MRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTT 646

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   C K   +RA  +F +M ++        Y+A+I+   K     EA      M   G
Sbjct: 647 MIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDG 706

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  D   +  ++    R GH+     L   MI  G+L D
Sbjct: 707 VSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 119/246 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + ++ LY  ++  LC   + +++  LL EM+ N L  + V  + L+    K G+  +A+
Sbjct: 322 FQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAI 381

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM  +RI         ++ GLC+ G++ +A  YF  +    L P+V +Y  +IDG 
Sbjct: 382 QLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGY 441

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +E A  L+  +  + + P    + +LI G+ K+    EA  L   +   G++   
Sbjct: 442 VKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSA 501

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+      G++ +   L  EM  + I P  +    ++K   ++  ++E+++L  +
Sbjct: 502 VTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLED 561

Query: 246 MMGRGL 251
           M  +GL
Sbjct: 562 MRAKGL 567



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 121/247 (48%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N++ D+ LY  +I G       E++  L   +++  +T + V   +L+  + K  +  EA
Sbjct: 426 NLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEA 485

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             LL+ +    +E + VT+  L++  C+ G + +  +    M    + P V  YT +I G
Sbjct: 486 RRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKG 545

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK+  +E +  L ++M  + + PD   Y  +I  + K +  ++A  L + M    ++  
Sbjct: 546 LCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPT 605

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y  L+ GL R G +++A  +   +  R I   ++   +++K H  +G+   A+++ +
Sbjct: 606 PATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFH 665

Query: 245 EMMGRGL 251
           +M+ +G 
Sbjct: 666 QMVEKGF 672



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 1/232 (0%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I+ GLC +S+F D+ L L +        + V   T+M  Y K G    A S    ML   
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I     ++ +LI GL  +G + EA++    M   GL P++  Y  +  G      +  AR
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 136 NLFDEM-PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            +  +M     + PD   YT LI G+ +  + +EAL L+  +   G  L++  Y+ L+  
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L + G + EA  L +EM    + PD +    L+    ++G + +AI+L  EM
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEM 387



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 4/226 (1%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
            D+  +L +MKE  L  +     +L+   +          + +++ DS    +  T  ++
Sbjct: 100 HDALFVLVKMKEQNLRPSIQTYNSLL---YNLRHTDIMWDVYNDIKDSGTPQSARTSSII 156

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           +DGLC     R+A+ +  +       P+V  +  ++   CK    + A++ F  M K  +
Sbjct: 157 VDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGI 216

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           +PDT +Y  LI G +   S +EAL L N M + G+  D+  Y  +  G    G +  AR 
Sbjct: 217 LPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGARE 276

Query: 207 LFHEMI-GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  +M+   G+ PD +    L+  H + GN++EA+ L+ +++  G 
Sbjct: 277 IIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGF 322



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 36/285 (12%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK     +  + TI+   C     + +K     M + G+  +T     L+     AG   
Sbjct: 178 GKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSME 237

Query: 63  EALSLLDEM------------------------------------LDSRIEVTVVTFCVL 86
           EAL L ++M                                     D  ++  +VT+ VL
Sbjct: 238 EALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVL 297

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I G C+ G + EA+     +   G   NV +Y+ L+  LCK+  ++ A  L  EM   ++
Sbjct: 298 ICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNL 357

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            PD   Y+ LI G  K    ++A+ L   M    +  +  A++ ++ GL   G L +AR+
Sbjct: 358 QPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARM 417

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            F  +I   + PD  L   ++  + + G+++EA+ L   +  + +
Sbjct: 418 YFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAI 462



 Score = 41.2 bits (95), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/159 (20%), Positives = 72/159 (45%), Gaps = 3/159 (1%)

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           S +V +A+    +M +  L P++  Y +L+  L   + +    ++++++           
Sbjct: 96  SRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMW---DVYNDIKDSGTPQSART 152

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
            + ++DG      F++A+    +         + ++ +++    + G    A+  F  M+
Sbjct: 153 SSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML 212

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             GILPD      L+      G+M+EA+EL N+M  +GL
Sbjct: 213 KYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGL 251


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 126/239 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  LL  +  N +  N V+  T++D+  K    +EA  L  EM+
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMI 252

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G C  G + +AID F +M    + P+V  +  L++  CK   ++
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + +FD M K+ + P+   Y +L+DGY   +   +A ++ N M + GV+ D+ +Y+ ++
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +     EA  LF EM  + I+PD +   SL+    + G +  A++L ++M  RG+
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431



 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 133/249 (53%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  ++ ++ +Y TII  +C      ++  L SEM   G++ + V  + L+  +   G+ +
Sbjct: 218 GNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLN 277

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L ++M+   I+  V TF +L++  CK G ++E    F  M   G+ PN   Y +L+
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C    + +A+++F+ M +  + PD  +Y+ +I+G+ K + F EA+NL   M    + 
Sbjct: 338 DGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNII 397

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y+SL+ GLS+ G +  A  L  +M  RG+ P      S+L    +   +D+AI L
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIAL 457

Query: 243 QNEMMGRGL 251
             ++  +G+
Sbjct: 458 LTKLKDKGI 466



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 127/250 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y  +I G CI  K  D+  L ++M    +  +      L++A+ K G+
Sbjct: 251 MISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  ++ D M+   I+   VT+  L+DG C    V +A   F  M   G++P++  Y+ 
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK    + A NLF EM ++++IPD   Y++LIDG  K      AL L ++M + G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V   +  Y S++  L +   + +A  L  ++  +GI P+      L+K   + G +++A 
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490

Query: 241 ELQNEMMGRG 250
           ++   ++ +G
Sbjct: 491 KVFEGLLVKG 500



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 115/232 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y  +I G C   KF+++  L  EM    +  + V  ++L+D   K+G 
Sbjct: 356 MAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGR 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL L+D+M D  +  T+ T+  ++D LCK   V +AI    ++ D G+ PN+  Y+ 
Sbjct: 416 ISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSI 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC+   +E AR +F+ +  +    +   YT +I G+     F EAL L ++M + G
Sbjct: 476 LIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNG 535

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              D   Y  ++  L +      A  L  EMI RG+ P +I      KK Y+
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAIWFQKKKEYD 587



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 8/255 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK +   Y +++ G C+  +   +K + + M + G+  +    + +++ + K  +
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKK 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L  EM    I   VVT+  LIDGL KSG +  A+    +M D G+ P +  Y +
Sbjct: 381 FDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNS 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D LCK + +++A  L  ++  + + P+   Y+ LI G  +    ++A  +   +   G
Sbjct: 441 ILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKG 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNM 236
            +L+++ YT ++ G    G   EA  L  +M   G +PD    EI+ +SL KK       
Sbjct: 501 HNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEN---- 556

Query: 237 DEAIELQNEMMGRGL 251
           D A +L  EM+ RG+
Sbjct: 557 DMAEKLLREMIARGV 571



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 110/220 (50%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           + +++ + G   +T+  TTL+      G+  +A    D+++        +++  LI GLC
Sbjct: 142 VFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLC 201

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G  R A+D   R+    + PNV +Y  +ID +CK   +  A +LF EM  + + PD  
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVV 261

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ALI G+       +A++L N+M    +  D+  +  LV    + G ++E + +F  M
Sbjct: 262 TYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + +GI P+ +   SL+  +     +++A  + N M   G+
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 103/221 (46%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           +D+  L + +     T        ++ +  K+      L L  +M    I+  +V   +L
Sbjct: 67  DDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNIL 126

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I+  C+ GL+  A   F ++   G  P+   +T LI GLC K  I++A    D++     
Sbjct: 127 INCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGF 186

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
             D  +Y  LI G  K    + AL+L  R+    V  ++  Y +++  + +   + EA  
Sbjct: 187 HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFD 246

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           LF EMI +GI PD +   +L+      G +++AI+L N+M+
Sbjct: 247 LFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/246 (20%), Positives = 108/246 (43%), Gaps = 4/246 (1%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLL----LSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           LP Y  +     +  KF+  + L     + +  +    N +  ++    +    +  +A+
Sbjct: 11  LPRYYDVPDSHFVPKKFQSFQFLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAV 70

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL + +L          F  ++  L KS      +    +M   G+ PN+     LI+  
Sbjct: 71  SLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCF 130

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   I  A ++F ++ K   +PDT  +T LI G       ++A    +++  +G   D 
Sbjct: 131 CQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQ 190

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            +Y +L+ GL + G  + A  L   + G  + P+ ++  +++    +   ++EA +L +E
Sbjct: 191 ISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSE 250

Query: 246 MMGRGL 251
           M+ +G+
Sbjct: 251 MISKGI 256


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 124/251 (49%), Gaps = 4/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + D   Y  ++ G     K E +     EM E GL  N V  T L+D + K G+
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              ALSLL  M +      V ++  +I+GL K     EA     +M + GL PNV  YT 
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC+    + A  +F +M KR  +P+   Y++LI G  +     EA     RM+E+G
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIG 644

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +  L+ Y++LV GL R G   EA  L  +M  RG  PD  +  SLL  H +   +D A+
Sbjct: 645 CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHAL 704

Query: 241 ELQNEMMGRGL 251
           ++ + +  +G 
Sbjct: 705 KIFHSIEAKGF 715



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 119/239 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G    A+   Y  II GLC+    E + +L  +M + G     V   TL++ Y   G 
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  LLD M ++  E    T+  L+ G  K G +  A  YF  M + GL+PN   YTA
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   ++ A +L   M +    P+  +Y A+I+G  K   F EA  + ++M E G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           +  ++  YT+L+ GL R G  Q A  +FH+M  R  LP+     SL+    + G  DEA
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA 637



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  Y ++I G C     + +  +   M + G   N+V  +TL++     G   EA
Sbjct: 228 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L +L+EM++  IE TV T+ + I  LC      EAI+   RM   G  PNV  YTALI G
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 347

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L +   +E A  L+ +M K  ++P+T  Y ALI+       F  AL + + M   G   +
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 407

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y  ++ GL   G +++A VLF +M+  G LP  +   +L+  +  +GN++ A  L +
Sbjct: 408 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 467

Query: 245 EMMGRG 250
            M   G
Sbjct: 468 LMKENG 473



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 4/239 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GL  E++F +++ +  +M E GL  N +  TTL+D   + G    A  +  +M 
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             +    + T+  LI GLC+ G   EA     RM + G  P +  Y+ L+ GLC+K    
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFY 666

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  +M +R   PD   Y +L+  + K+     AL + + +   G  L L+ Y +L+
Sbjct: 667 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 726

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L + G ++EA+ LF  M+ +    DEI+   L+    + G +D  ++L + M  +  
Sbjct: 727 CALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNF 785



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 113/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+  +  Y   I  LC     E++  L++ MK+ G   N    T L+    + G+
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  +ML   +    VT+  LI+ LC  G    A+  F  M   G   N   Y  
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLC    IE+A  LF++M K   +P    Y  LI+GYL   +   A  L + M E G
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D   Y  LV G S+ G L+ A   F EM+  G+ P+ +   +L+  H + G +D A+
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533

Query: 241 ELQNEM 246
            L   M
Sbjct: 534 SLLKRM 539



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 117/240 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC+  +F  +  +   M+ +G  ANT     ++      G+  +A+ L ++ML
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 TVVT+  LI+G    G V  A      M + G  P+   Y  L+ G  K   +E
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F EM +  + P+  +YTALIDG+ K      AL+L  RM E+G + ++ +Y +++
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GLS+     EA  +  +M+ +G+LP+ I   +L+      G    A ++ ++M  R  L
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 615



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 120/230 (52%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E ++ L  +M  +G+  + +   TL++   K G+  EA  +L ++    +   V T+  L
Sbjct: 180 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 239

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I G C++  +  A   F RM   G  PN   Y+ LI+GLC +  ++ A ++ +EM ++ +
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P    YT  I      E  +EA+ L  RM + G   ++  YT+L+ GLSR G L+ A  
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           L+H+M+  G++P+ +   +L+ +    G    A+++ + M G G L+ ++
Sbjct: 360 LYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 4/207 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    +L  Y ++I+GLC E K ++++     M E G        +TL+    + G 
Sbjct: 609 MEKRKCLPNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGR 664

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+ +M +         +  L+   CK+  V  A+  F  +   G   ++++Y A
Sbjct: 665 FYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRA 724

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK   +E A+ LFD M +++   D   +T L+DG LK       + L + M    
Sbjct: 725 LICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKN 784

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVL 207
              ++  Y  L   LSR G   E+  L
Sbjct: 785 FTPNIQTYVILGRELSRIGKSIESEPL 811



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 1/188 (0%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL-VREAIDYFGRMPDFGLHPNVAVYTALID 123
           +S+L+ ++  R+        +L+   C++   +R   D+   +   G   ++     L+ 
Sbjct: 112 ISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLI 171

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            L K   +E ARNL+ +M    + P    +  LI+   K    +EA  + +++ +  +  
Sbjct: 172 QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP 231

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  YTSL+ G  R  +L  A  +F  M+  G  P+ +   +L+      G +DEA+++ 
Sbjct: 232 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 291

Query: 244 NEMMGRGL 251
            EM+ +G+
Sbjct: 292 EEMIEKGI 299


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 132/249 (53%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D   + T+I GL + +K  ++  L+ +M + G   + V   T+++   K G+   ALS
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M   +IE  VV +  +IDGLCK   + +A++ F  M + G+ P+V  Y++LI  LC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L  +M +R + P+   ++ALID ++K     EA  L + M +  +D D+ 
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ G      L EA+ +F  MI +   P+ +   +L+K   +   ++E +EL  EM
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424

Query: 247 MGRGLLSGS 255
             RGL+  +
Sbjct: 425 SQRGLVGNT 433



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 111/219 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ D+  Y ++I  LC   ++ D+  LLS+M E  +  N V  + L+DA+ K G+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEM+   I+  + T+  LI+G C    + EA   F  M      PNV  Y+ 
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E    LF EM +R ++ +T  YT LI G+ +      A  +  +M  VG
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  ++  Y  L+ GL + G L +A V+F  +    + PD
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 1/218 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KGK I+AD+ +Y TII GLC     +D+  L +EM   G+  +    ++L+      G  
Sbjct: 251 KGK-IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S+A  LL +M++ +I   VVTF  LID   K G + EA   +  M    + P++  Y++L
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+G C  + ++ A+++F+ M  +D  P+   Y+ LI G+ K +  +E + L   M++ G+
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             +   YT+L+ G  +      A+++F +M+  G+ P+
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + DL  YGT++ GLC     + +  LL +M++  + A+ VI  T++D   K   
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  EM +  I   V T+  LI  LC  G   +A      M +  ++PNV  ++A
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+  +  A  L+DEM KR + PD   Y++LI+G+  H+   EA ++   M    
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y++L+ G  +   ++E   LF EM  RG++ + +   +L+   ++  + D A 
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453

Query: 241 ELQNEMMGRGL 251
            +  +M+  G+
Sbjct: 454 MVFKQMVSVGV 464



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  DL  Y   I   C  S+   +  +L++M + G   + V  ++L++ Y  +  
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A++L+D+M++   +    TF  LI GL       EA+    +M   G  P++  Y  
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK+  I+ A +L  +M K  +  D   Y  +IDG  K++   +ALNL   M   G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y+SL+  L   G   +A  L  +MI R I P+ +   +L+    + G + EA 
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348

Query: 241 ELQNEMMGRGL 251
           +L +EM+ R +
Sbjct: 349 KLYDEMIKRSI 359



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  D+  Y ++I G C+  + +++K +   M       N V  +TL+  + KA  
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L  EM    +    VT+  LI G  ++     A   F +M   G+HPN+  Y  
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   + +A  +F+ + +  M PD   Y  +I+G  K    ++   L   ++  G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++ AY +++ G  R G  +EA  L  +M   G LP+     +L++     G+ + + 
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593

Query: 241 ELQNEMMGRGL 251
           EL  EM   G 
Sbjct: 594 ELIKEMRSCGF 604



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 1/240 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   ++  Y T+I G C   + E+   L  EM + GL  NTV  TTL+  +F+A +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+   +   ++T+ +L+DGLCK+G + +A+  F  +    + P++  Y  
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   +E    LF  +  + + P+  AY  +I G+ +  S +EA +L  +M E G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y +L+    R G  + +  L  EM   G   D    I L+      G +D++ 
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS-TIGLVTNMLHDGRLDKSF 627



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 113/228 (49%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           +KFE    L  +M+  G++ +    +  ++ + +  + S AL++L +M+    E  +VT 
Sbjct: 97  NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 156

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             L++G C S  + +A+    +M + G  P+   +T LI GL   N    A  L D+M +
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           R   PD   Y  +++G  K      AL+L  +M +  ++ D+  Y +++ GL +  H+ +
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A  LF EM  +GI PD     SL+      G   +A  L ++M+ R +
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 107/227 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +D+  L  +M ++    + V    L+ A  K  +    +SL ++M    I   + T+ 
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           + I+  C+   +  A+    +M   G  P++   ++L++G C    I  A  L D+M + 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PDT  +T LI G   H    EA+ L ++M + G   DL  Y ++V GL + G +  A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L  +M    I  D ++  +++    +  +MD+A+ L  EM  +G+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 130/252 (51%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G  ++ +L  Y  ++   C     ED++ +L  ++  GL+ N V  T L+  Y K G 
Sbjct: 244 MEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGR 303

Query: 61  PSEALSLLDEMLDS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             EA  ++ EM ++  I V  V + ++I+G C+ G + +A      M D G+H N+ VY 
Sbjct: 304 MEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYN 363

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I+GLCK   +E  + +  EM    M PD  +Y  LIDGY +  S ++A  +   M   
Sbjct: 364 TMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRN 423

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+      Y +L+ G      + +A  L+  M+ RG+ P+EI C +LL   ++ G  ++A
Sbjct: 424 GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQA 483

Query: 240 IELQNEMMGRGL 251
           + L  E + RGL
Sbjct: 484 LNLWKETLARGL 495



 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 119/227 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G C     +D+  L   M + G+  N + C+TL+D  FKAG+  +AL+L  E L
Sbjct: 432 YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL 491

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   V+TF  +I+GLCK G + EA +   RM +    P+   Y  L DG CK   + 
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L ++M      P    + + I G+   + + +  ++ + M+  G+  +L  Y +L+
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            G  + G+L EA  L+ EM+  G+ P+  +C +L+   Y+ G +DEA
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEA 658



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 126/252 (50%), Gaps = 9/252 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  +L  YG +I G C E    ++  L  EM  NG+  N  IC+ LM  ++K G+
Sbjct: 595 MSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGK 654

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L ++++  +        + ID       +   +D    + D   H    ++  
Sbjct: 655 VDEANLVLQKLVNIDMIPGCSISTIEIDK------ISHVVD---TIADGNPHSANVMWNV 705

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK   I  A++LF+ +  +  +PD   Y++LI G     S  EA +L++ M   G
Sbjct: 706 IIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG 765

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y SL++GL + G L  A  LF+++  +GI P+ I   +L+ ++ + G   EA 
Sbjct: 766 LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAF 825

Query: 241 ELQNEMMGRGLL 252
           +L+ +M+  G +
Sbjct: 826 KLKQKMVEEGYM 837



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 114/224 (50%), Gaps = 1/224 (0%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           + ++  +M+  G+  +      +  AY + G  ++A+  ++EM    +EV +V +  ++D
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR-DMI 147
             C  G   +A      +   GL PNV  YT L+ G CK   +E A  +  EM +  D++
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
            D  AY  +I+GY +     +A  ++N M + G+ ++L  Y +++ GL + G ++E + +
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             EM   G+ PD+    +L+  +   G+M +A E+   M+  GL
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGL 425



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 125/247 (50%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           ++ K +  ++  Y  ++ G C + + E+++ ++ EMKE G +  + V    +++ Y + G
Sbjct: 279 LQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRG 338

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              +A  + +EM D+ I V +  +  +I+GLCK G + E       M D G+ P+   Y 
Sbjct: 339 RMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYN 398

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LIDG C++  + +A  +   M +  +   T  Y  L+ G+    +  +AL L   M + 
Sbjct: 399 TLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKR 458

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV  +  + ++L+ GL + G  ++A  L+ E + RG+  + I   +++    + G M EA
Sbjct: 459 GVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518

Query: 240 IELQNEM 246
            EL + M
Sbjct: 519 EELLDRM 525



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 112/251 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D   Y T+I G C E     +  +   M  NGL A T+   TL+  +     
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L   ML   +    ++   L+DGL K+G   +A++ +      GL  NV  +  
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK   +  A  L D M +    PD+  Y  L DGY K      A +L N+M  +G
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  + S + G        +   +  EM  RG+ P+ +   +L+    + GN+ EA 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 241 ELQNEMMGRGL 251
            L  EM+  G+
Sbjct: 625 NLYFEMVNNGM 635



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 114/242 (47%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +I  D   YG +I G C   + +D+  + +EM++ G+  N  +  T+++   K G   E 
Sbjct: 319 DIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             +L EM D  +     ++  LIDG C+ G +R+A +    M   GL      Y  L+ G
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKG 438

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            C  + I+ A  L+  M KR + P+  + + L+DG  K    ++ALNL       G+  +
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  + +++ GL + G + EA  L   M      PD +   +L   + + G +  A  L N
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 245 EM 246
           +M
Sbjct: 559 KM 560



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 56/290 (19%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            + +  ++  + T+I GLC   +  +++ LL  MKE     +++   TL D Y K G+  
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551

Query: 63  EALSLLD-----------EMLDSRI------------------------EVTVVTFCVLI 87
            A  L++           EM +S I                           +VT+  LI
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611

Query: 88  DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
            G CK G + EA + +  M + G++PNV + +AL+    K+  ++ A  +  ++   DMI
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMI 671

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS------LVWGLSRCGHL 201
           P  +  T  ID  + H               V    D N +++      +++GL + G +
Sbjct: 672 PGCSISTIEIDK-ISH--------------VVDTIADGNPHSANVMWNVIIFGLCKSGRI 716

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +A+ LF  +  +  LPD     SL+      G++DEA  L++ M+  GL
Sbjct: 717 ADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGL 766



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 19/148 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y ++I+GLC   K   +  L ++++  G++ N +   TL+D Y K G+
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L  +M++                    G + EAI    +M +  + PN   Y  
Sbjct: 821 TTEAFKLKQKMVEE-------------------GYMEEAIKLLDQMIENNVDPNYITYCT 861

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIP 148
           LI G  K   +E    L+DEM  R ++P
Sbjct: 862 LIHGYIKSGNMEEISKLYDEMHIRGLLP 889



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 79/172 (45%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           + V+F +L+     +G +  A++ F  M   G  P++     L++ L +      A  ++
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
            +M    ++PD      +   Y +     +A+     M  +G++++L AY +++      
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G  ++AR +   +  +G+ P+ +    L+K + + G M+EA  +  EM   G
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETG 318



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 26/187 (13%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLH--------PNVAVYTALIDGLCKKNCIERARNL 137
           L   L ++ L R  +D     PD  LH        P++  +  L+  L +      AR L
Sbjct: 68  LTPALLQAALRRVRLD-----PDAALHLFRLAPSRPSLVSHAQLLHILARARRFHDARAL 122

Query: 138 FDEMPK-------------RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
              +P              RD      ++  L+  +        ALN+ + M +VG    
Sbjct: 123 LSSLPPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPS 182

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           L +   L+  L + G    A +++ +M   G+LPDE     + K +   G + +A+E   
Sbjct: 183 LRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVE 242

Query: 245 EMMGRGL 251
           EM G GL
Sbjct: 243 EMEGMGL 249


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/248 (32%), Positives = 132/248 (53%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           ++ + D+ +Y TII GLC +   +++  L SEM   G+  + +  TTL+  +  AG+  E
Sbjct: 144 RSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLME 203

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+EM+   I   + T+  LID LCK G V+E+ +    M   G+ P+V +Y+ L+D
Sbjct: 204 AFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMD 263

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C    +++A+ +F  M +  + PD  +Y  +I+G  K +   EA+NL   M    +  
Sbjct: 264 GYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIP 323

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D   Y+SL+ GL + G +     L  EM  RG   + +   SLL    +  N+D+AI L 
Sbjct: 324 DTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALF 383

Query: 244 NEMMGRGL 251
            +M  RG+
Sbjct: 384 MKMKERGI 391



 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 134/252 (53%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KNI  ++  Y T+I  LC E K ++SK LL+ M + G+  + VI + LMD Y   GE  +
Sbjct: 214 KNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQK 273

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +   M+ + +   V ++ ++I+GLCK   V EA++    M    + P+   Y++LID
Sbjct: 274 AKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLID 333

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   I    +L  EM  R    +   Y +L+DG  K+++  +A+ L  +M E G+  
Sbjct: 334 GLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQP 393

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   YT+L+ GL + G L++ + LF  ++ +G   D      ++    + G  DEA+ ++
Sbjct: 394 NKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMK 453

Query: 244 NEMMGRGLLSGS 255
           ++M   G +  +
Sbjct: 454 SKMEDNGCIPNA 465



 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 129/250 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y T+I G C+  +  ++  LL+EM    +  N     TL+D   K G+
Sbjct: 176 MNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGK 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+ +LL  M    ++  VV + +L+DG C  G V++A   F  M   G++P+V  Y  
Sbjct: 236 VKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNI 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK   ++ A NL  EM  ++MIPDT  Y++LIDG  K       L+L   M   G
Sbjct: 296 IINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRG 355

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y SL+ GL +  +L +A  LF +M  RGI P++    +L+    + G + +  
Sbjct: 356 QPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQ 415

Query: 241 ELQNEMMGRG 250
            L   ++ +G
Sbjct: 416 ALFQHLLVKG 425



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 110/213 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y  II GLC   + +++  LL EM    +  +TV  ++L+D   K G  +  L
Sbjct: 286 VNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTIL 345

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM        +VT+  L+DGLCK+  + +AI  F +M + G+ PN   YTALIDGL
Sbjct: 346 DLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +++ + LF  +  +    D   YT +I G  K   F EAL +K++M + G   + 
Sbjct: 406 CKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNA 465

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
             +  ++  L       +A  L HEMI +G+LP
Sbjct: 466 VTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  DL     +I   C   +   S  +L ++ + G   NT+I  TLM      GE
Sbjct: 36  MEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGE 95

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             ++L   D+++    ++  V++ +L++GLCK G  R AI     + D    P+V +Y+ 
Sbjct: 96  VKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYST 155

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   ++ A +L+ EM  R + PD   YT LI G+       EA  L N M    
Sbjct: 156 IIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKN 215

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y +L+  L + G ++E++ L   M  +G+ PD ++   L+  +   G + +A 
Sbjct: 216 INPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAK 275

Query: 241 ELQNEMMGRGL 251
           ++   M+  G+
Sbjct: 276 QIFLVMVQTGV 286



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 118/238 (49%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T++ GLC++ + + S     ++   G   + V    L++   K GE   A+ LL  + D 
Sbjct: 85  TLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDR 144

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
                VV +  +IDGLCK  LV EA D +  M   G+ P+V  YT LI G C    +  A
Sbjct: 145 STRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEA 204

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L +EM  +++ P+   Y  LID   K    KE+ NL   MT+ GV  D+  Y+ L+ G
Sbjct: 205 FGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDG 264

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               G +Q+A+ +F  M+  G+ PD      ++    +   +DEA+ L  EM+ + ++
Sbjct: 265 YCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMI 322



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 122/248 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            +  + D   YG ++ GLC   +   +  LL  +++     + V+ +T++D   K     
Sbjct: 108 AQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVD 167

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA  L  EM    I   V+T+  LI G C +G + EA      M    ++PN+  Y  LI
Sbjct: 168 EAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLI 227

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK+  ++ ++NL   M K+ + PD   Y+ L+DGY      ++A  +   M + GV+
Sbjct: 228 DTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVN 287

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ +Y  ++ GL +   + EA  L  EM+ + ++PD +   SL+    + G +   ++L
Sbjct: 288 PDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDL 347

Query: 243 QNEMMGRG 250
             EM  RG
Sbjct: 348 TKEMHHRG 355



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 111/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G I+  L     +     L  +M+  G+  + V  + L++ +   G+ + + S+L ++L
Sbjct: 13  FGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKIL 72

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +   +    L+ GLC  G V++++ +  ++   G   +   Y  L++GLCK     
Sbjct: 73  KLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETR 132

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   +  R   PD   Y+ +IDG  K +   EA +L + M   G+  D+  YT+L+
Sbjct: 133 CAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLI 192

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G    G L EA  L +EMI + I P+     +L+    + G + E+  L   M  +G+
Sbjct: 193 CGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV 251



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 35/202 (17%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++ +  K       +SL  +M    I   +VT  +LI+  C  G +  +    G++   G
Sbjct: 16  ILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 75

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PN  +   L+ GLC K                                      K++L
Sbjct: 76  YQPNTIILNTLMKGLCLKG-----------------------------------EVKKSL 100

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           +  +++   G  +D  +Y  L+ GL + G  + A  L   +  R   PD ++  +++   
Sbjct: 101 HFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGL 160

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
            +   +DEA +L +EM  RG+ 
Sbjct: 161 CKDKLVDEAYDLYSEMNARGIF 182


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 130/259 (50%), Gaps = 15/259 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ G C  +    +  L S + + G+      C  L+ +    GE  +AL LL+ ML
Sbjct: 541 YSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERML 600

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +E   + +  LI   C+ G ++ A   F  + + G+ P+V  YT +I+G C+ NC+ 
Sbjct: 601 ALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLR 660

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLK---------------HESFKEALNLKNRMT 177
            AR++F++M +R + PD   YT ++DG+ K                E   +A    + M 
Sbjct: 661 EARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMK 720

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E+G+  D+  YT L+    +  +LQ+A  L+ EMI RG+ PD +   +LL     RG+MD
Sbjct: 721 EMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMD 780

Query: 238 EAIELQNEMMGRGLLSGSK 256
            AI L NEM  +G+   S+
Sbjct: 781 RAITLVNEMSFKGIEPDSR 799



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 109/219 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  N   D   Y  +I G C E K ++++ +  +M   G+  +  I   L+ AY KAG 
Sbjct: 288 LRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGN 347

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L ++M+ + I+   V    ++  LC+ G+  E +D F    D G+  +  +Y  
Sbjct: 348 LLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNI 407

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D LCK   +E A  L +EM  R M  D   YT LI GY       +A N+   M E G
Sbjct: 408 VVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERG 467

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           ++ D+  Y  LV G SR G  +EA  L   +  +G+ P+
Sbjct: 468 IEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPN 506



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 15/217 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   +++ +  +YG +I   C +   + ++L+   + E G+T + +  T +++ Y +   
Sbjct: 599 MLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNC 658

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK------------SGLVREAID---YFGR 105
             EA  + ++M +  I+  V+T+ V++DG  K             G   E +D   ++  
Sbjct: 659 LREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSE 718

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M + G+ P+V  YT LID  CK N ++ A NL+DEM  R + PD   YTAL+        
Sbjct: 719 MKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGD 778

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
              A+ L N M+  G++ D  A + L  G+ +   +Q
Sbjct: 779 MDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 4/248 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    IK +  +  +I+  LC      +      E +++G+  + V+   ++DA  K G+
Sbjct: 358 MVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGK 417

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL+EM   R+ + VV +  LI G C  G + +A + F  M + G+ P++  Y  
Sbjct: 418 VEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNI 477

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G  +    + A  L D +  + + P++  +  +I+G       KEA    N +    
Sbjct: 478 LVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE--- 534

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            D  L  Y+++V G  +    ++A  LF  +  +GIL  +  C  LL      G  D+A+
Sbjct: 535 -DKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKAL 593

Query: 241 ELQNEMMG 248
            L   M+ 
Sbjct: 594 ILLERMLA 601



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 35/259 (13%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           F+++   L + K  G   + + C  LM+   + G+   A+++   +    +     T+ +
Sbjct: 173 FDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGI 232

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV---------------------------- 117
            I  LC+ G   EA+D F  M + G++PN                               
Sbjct: 233 FIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAAN 292

Query: 118 -------YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
                  YTA+I G C +  ++ A ++F +M    + PD   Y ALI  Y K  +  +A+
Sbjct: 293 WPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAV 352

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L N M   G+  +    +S++  L   G   E    F E    GI  DE+L   ++   
Sbjct: 353 ALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDAL 412

Query: 231 YERGNMDEAIELQNEMMGR 249
            + G ++EA+EL NEM GR
Sbjct: 413 CKLGKVEEAVELLNEMKGR 431



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 115/279 (41%), Gaps = 37/279 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG  I  LC +  FE++  +  EM+E G+  N V C+T ++              L  + 
Sbjct: 230 YGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALR 289

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK---- 128
            +   +    +  +I G C    ++EA D F  M + G+ P+  +Y ALI   CK     
Sbjct: 290 AANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLL 349

Query: 129 ----------------NCI---------------ERARNLFDEMPKRDMIPDTTAYTALI 157
                           NC+                   + F E     +  D   Y  ++
Sbjct: 350 QAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVV 409

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D   K    +EA+ L N M    + LD+  YT+L+ G    G L +A+ +F EM  RGI 
Sbjct: 410 DALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIE 469

Query: 218 PDEILCISLLKKHYERGNM-DEAIELQNEMMGRGLLSGS 255
           PD I+  ++L   + R  +  EA+EL + +  +GL   S
Sbjct: 470 PD-IVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNS 507



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 35/209 (16%)

Query: 78  VTVVTFCVLIDGLCKSGLVREAID-----------------------------------Y 102
           V ++   +L+    + G+  EAID                                    
Sbjct: 155 VLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAI 214

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  +   GL+PN   Y   I  LC+K   E A ++F EM +  + P+    +  I+G   
Sbjct: 215 YRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCS 274

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           H+           +      +D  AYT+++ G      L+EA  +F +M+  GI PD  +
Sbjct: 275 HKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYI 334

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  + + GN+ +A+ L N+M+  G+
Sbjct: 335 YGALIHAYCKAGNLLQAVALHNDMVSNGI 363



 Score = 40.4 bits (93), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 38/195 (19%), Positives = 79/195 (40%), Gaps = 26/195 (13%)

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR-------------EAIDYFGRM 106
           EP+ A S   ++ +S  +  V T+  LI  LC+  L R             E++  F   
Sbjct: 76  EPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDIT 135

Query: 107 PDFGL-----------HPNVAVYT--ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
             F +           H +V +     L+    +    + A +   +  +R  +P   + 
Sbjct: 136 ALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSC 195

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             L++  ++H     A+ +   +  +G++ +   Y   +  L R G+ +EA  +F EM  
Sbjct: 196 NFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEE 255

Query: 214 RGILPDEILCISLLK 228
            G+ P+ + C + ++
Sbjct: 256 AGVNPNAVTCSTYIE 270


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 122/248 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
             + K D  +Y T+I G C++   + +  LL EM  N L      C +L+  Y+K G   
Sbjct: 489 ASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFD 548

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL + + ML   I    +    ++DG C++G  +EA+       + G + N   Y A+I
Sbjct: 549 QALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAII 608

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
             LCK+   ERA  L   M KR+++P    Y+ LI G+ K  +FK A+NL  RM +VG+ 
Sbjct: 609 YKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGIT 668

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  YT L+   S    + EA  +F EM  RG+  D+I   +L+        M +A  L
Sbjct: 669 FNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWAL 728

Query: 243 QNEMMGRG 250
             EM   G
Sbjct: 729 FEEMSREG 736



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 114/237 (48%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I+ G C    F+++  LL + +E+G   N      ++    K G P  AL LL  ML   
Sbjct: 572 ILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRN 631

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           +  +VV +  LI G  K    + A++ F RM   G+  N+A YT L+      + +  A 
Sbjct: 632 VLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAY 691

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            +F EM +R +  D  +YT LI G+  +   K+A  L   M+  G   ++  YT ++ G 
Sbjct: 692 GIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGF 751

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +   +  A  +F +M    ++PD +    L+  +++ G  D+A +L + M  +G+L
Sbjct: 752 CKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVL 808



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 3/204 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+   +  Y T+I G   +S F+ +  L + M + G+T N    T LM  +  + +
Sbjct: 627 MLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHK 686

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +  EM +  + +  +++  LI G C +  +++A   F  M   G  PNV  YT 
Sbjct: 687 MHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTC 746

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG CK N I+ A  +FD+M +  +IPD   YT LID Y KH  F +A  L + M + G
Sbjct: 747 IIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKG 806

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
           V  D    T  V GL + G +QE 
Sbjct: 807 VLPD--DITHNVLGL-KAGTVQEG 827



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 124/245 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I+G C   +  ++  +L EMK +G+  +    + L++A+   G+  + L L++EM 
Sbjct: 394 FNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEME 453

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S+I+ ++V++  LI GLCK  +++ A+D F  +       +  VY  LIDG C +  ++
Sbjct: 454 HSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMD 513

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L +EM   +++P   +  +LI GY K   F +AL + N M   G+  D  A   ++
Sbjct: 514 SAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYIL 573

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  R G+ +EA  L  +    G   +     +++ K  + G  + A+EL   M+ R +L
Sbjct: 574 DGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVL 633

Query: 253 SGSKN 257
               N
Sbjct: 634 PSVVN 638



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 115/247 (46%), Gaps = 4/247 (1%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K  +  Y T I GLC     E + +L+  +       N+     ++  + K GE  EAL 
Sbjct: 353 KPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQ 412

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L+EM  S I   V ++ +LI+  C  G V + +D    M    + P++  YT+LI GLC
Sbjct: 413 VLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLC 472

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           KKN ++ A ++F  +       D+T Y  LIDG+        A+ L   M  +  +L   
Sbjct: 473 KKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEM--ICNELVPT 530

Query: 187 AYT--SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           A++  SL+ G  + G   +A  +F+ M+  GI PD I C  +L      G   EA+ L  
Sbjct: 531 AFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLE 590

Query: 245 EMMGRGL 251
           +    G 
Sbjct: 591 DFQEHGF 597



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 106/224 (47%)

Query: 28  DSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLI 87
            + ++L ++  +G     V  +T +    K G    AL L+  +  +   +   +F  +I
Sbjct: 339 QAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVI 398

Query: 88  DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
            G CK G V EA+     M   G+ P+V  Y+ LI+  C K  + +  +L +EM    + 
Sbjct: 399 YGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIK 458

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
           P   +YT+LI G  K    + A+++ + +       D   Y +L+ G    G +  A  L
Sbjct: 459 PSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKL 518

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             EMI   ++P    C SL++ +Y+ G  D+A+E+ N M+  G+
Sbjct: 519 LEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGI 562



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 99/209 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II+ LC E   E +  LL  M +  +  + V  +TL+  + K      A++L   M+
Sbjct: 604 YNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMV 663

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   + T+ +L+     S  + EA   F  M + GL  +   YT LI G C    ++
Sbjct: 664 KVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMK 723

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  LF+EM +    P+   YT +IDG+ K      A  + ++M    V  D+  YT L+
Sbjct: 724 KAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLI 783

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEI 221
               + G+  +A  L+  M  +G+LPD+I
Sbjct: 784 DWYHKHGYFDQAHKLYDVMKDKGVLPDDI 812



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 107/221 (48%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           F+ +  + + M  +G+  +T+ C  ++D   +AG   EAL+LL++  +    +   ++  
Sbjct: 547 FDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNA 606

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I  LCK G    A++   RM    + P+V  Y+ LI G  K++  +RA NLF  M K  
Sbjct: 607 IIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVG 666

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +  +   YT L+  +       EA  +   M E G+ LD  +YT+L+ G      +++A 
Sbjct: 667 ITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAW 726

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            LF EM   G  P+ I    ++    +   +D A  + ++M
Sbjct: 727 ALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKM 767



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 6/196 (3%)

Query: 63  EALSLLDEMLDS--RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           +   L    LDS   +E + V F VLI     + ++  A+D F      GL P++     
Sbjct: 228 DTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNF 287

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK----HESFKEALNLKNRM 176
           L+  L + N +E  R +F+E+  R   P+   YT +++ Y          ++A  +  ++
Sbjct: 288 LLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKI 347

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              G    +  Y++ + GL + G+++ A +L   +       +      ++    +RG +
Sbjct: 348 YRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEV 407

Query: 237 DEAIELQNEMMGRGLL 252
            EA+++  EM   G+L
Sbjct: 408 FEALQVLEEMKSSGIL 423



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 5/235 (2%)

Query: 17  IWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I G C E+K++  +L  + +     +  + V+   L+  +        AL +        
Sbjct: 218 IVGFCNEAKYDTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFSNAKHVG 277

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK-NC---I 131
           +E  + T   L+  L ++  V      F  + D G  PN+  YT +++  C    C   +
Sbjct: 278 LEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGM 337

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            +A  +  ++ +    P    Y+  I G  K  + + AL L   +      L+ +++  +
Sbjct: 338 RQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDV 397

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           ++G  + G + EA  +  EM   GILPD      L+     +G++ + ++L  EM
Sbjct: 398 IYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEM 452


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 125/254 (49%), Gaps = 4/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSE-MKENGLTANTVICTTLMDAYFKAG 59
           MK K ++ D   +  +I G C   K +++  L  E +  +    + V  T L+D + K+G
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              +A+ +L  M   +    VVT+  L+ GLCK+G + +A+D F RM   G  PNV  YT
Sbjct: 199 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYT 258

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LI GLC  + ++ AR L DEM      PDT +Y AL+DGY +    +EA  L   M   
Sbjct: 259 TLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATK 318

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-IGRGILPDEILCISLLKKHYERGN-MD 237
               D   YT LV G      L+EAR L   M    GI PD ++  S++   Y R     
Sbjct: 319 SCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD-VVTYSIVVAGYSRAKRFV 377

Query: 238 EAIELQNEMMGRGL 251
           EA E   EM+ R +
Sbjct: 378 EAAEFIQEMIARNV 391



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 125/252 (49%), Gaps = 2/252 (0%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEP 61
           GK++  DL  Y T+I G C + + + +  +L EM   +G+  + V  T+++D   + G+ 
Sbjct: 70  GKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKM 129

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR-MPDFGLHPNVAVYTA 120
             A  ++ EM    +E    TF  LI G C +  V EA+  +   +      P+V  YTA
Sbjct: 130 DRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTA 189

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +E+A  +   M  R  +P+   Y++L+ G  K     +AL+L  RMT  G
Sbjct: 190 LIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKG 249

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YT+L+ GL     +  AR+L  EM      PD +   +LL  +   G ++EA 
Sbjct: 250 CVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAK 309

Query: 241 ELQNEMMGRGLL 252
           +L  EM  +  L
Sbjct: 310 QLFKEMATKSCL 321



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 119/259 (45%), Gaps = 8/259 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMK-ENGLTANTVICTTLMDAYFKAG 59
           M  K+   D   Y  ++ G C  S+ E+++ LL  MK   G+  + V  + ++  Y +A 
Sbjct: 315 MATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 374

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA   + EM+   +    VT+  LIDGLCK+G V  A++    M +  + P+V  + 
Sbjct: 375 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFN 434

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++I  LC+   ++ A  L   M    + P    YT L++G+ +    + A  L   M + 
Sbjct: 435 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKK 494

Query: 180 GVD-------LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
                     +   A+++L+ GL +   + +A  +  E+  R   P E  C++++     
Sbjct: 495 AKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 554

Query: 233 RGNMDEAIELQNEMMGRGL 251
            G  +EA +L N +   GL
Sbjct: 555 AGRTEEAGKLINSISKVGL 573



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 93/171 (54%), Gaps = 3/171 (1%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           TVVT+ ++IDG CK+  +++A+  F +M +F + PN   Y  +++GLCK     +A  + 
Sbjct: 6   TVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVL 64

Query: 139 DEMPK-RDMIPDTTAYTALIDGYLKHESFKEALN-LKNRMTEVGVDLDLNAYTSLVWGLS 196
            EM   + + PD   Y+ +I+G+ K      A   L+  +T  G+  D+  YTS+V GL 
Sbjct: 65  KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLC 124

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           R G +  A  +  EM  +G+ PD+    +L+        +DEA++L  E++
Sbjct: 125 RDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 175



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 3/142 (2%)

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
            P V  +T +IDG CK N +++A   F++M +  + P+   Y  +++G  K     +A  
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 172 LKNRMTE-VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLLKK 229
           +   M +   V  DL  Y++++ G  + G +  A  +  EM+ R GI PD +   S++  
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
               G MD A E+  EM  +G+
Sbjct: 123 LCRDGKMDRACEMVREMKLKGV 144


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/206 (36%), Positives = 111/206 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC + K  ++  +   M + G  AN  I T L+D+Y K G   EA+ L + M 
Sbjct: 326 YSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMK 385

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   E   VT+ VL++GLCKSG + + ++ F    + G+  N   Y +LIDGL K   IE
Sbjct: 386 NEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIE 445

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NLF+EM ++    D+  Y A+ID   KH    +AL L  RM E G D  +  +T L+
Sbjct: 446 DAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILI 505

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILP 218
            GL +    +EA   + +MI +GI P
Sbjct: 506 DGLFKEHKNEEAIKFWDKMIDKGITP 531



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 114/250 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D   Y  +I G C   K + +     +M+   +  + +   TL+ A +   +
Sbjct: 244 MDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERD 303

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               LSL  EM +  +E+   ++ ++I GLCK     EA   F  M   G   NVA+YTA
Sbjct: 304 FDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTA 363

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K   +E A  LF+ M      PD   Y+ L++G  K     + + L +     G
Sbjct: 364 LIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKG 423

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V ++   Y SL+ GL + G +++A  LF EM  +G   D     +++    + G +D+A+
Sbjct: 424 VAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQAL 483

Query: 241 ELQNEMMGRG 250
            L   M   G
Sbjct: 484 ALFGRMEEEG 493



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 1/214 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + K +  +   Y ++I GL    + ED++ L  EM E G   ++     ++DA  K G+ 
Sbjct: 420 RNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKI 479

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +AL+L   M +   + TV TF +LIDGL K     EAI ++ +M D G+ P VA + AL
Sbjct: 480 DQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRAL 539

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
             GLC    + RA  + D++    +IP+T A+  +I+   K +  KEA  L + + + G 
Sbjct: 540 AIGLCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEACKLADGIVDRGR 598

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           ++     T L+  L + G+      L H  IG G
Sbjct: 599 EIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIG 632



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 104/222 (46%)

Query: 30  KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG 89
           +L+  E+K+ GL        +L+ ++   G   E L +   M ++ I+ ++ T+  L++G
Sbjct: 168 RLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNG 227

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L  S  +  A   F  M    + P+   Y  +I G CK   +++A   F +M  +++ PD
Sbjct: 228 LVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPD 287

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  LI        F   L+L   M E G+++  ++Y+ ++ GL +     EA  +F 
Sbjct: 288 KITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFE 347

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            M  +G   +  +  +L+  + + G+M+EA+ L   M   G 
Sbjct: 348 TMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGF 389



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 111/250 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I   L  Y  ++ GL      E ++ +   M    +  +TV    ++  Y KAG+
Sbjct: 209 MKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGK 268

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+    +M    ++   +T+  LI            +  +  M + GL      Y+ 
Sbjct: 269 LQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSL 328

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK+     A  +F+ M ++    +   YTALID Y K+ S +EA+ L  RM   G
Sbjct: 329 VIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEG 388

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D   Y+ LV GL + G L +   LF     +G+  + +   SL+    + G +++A 
Sbjct: 389 FEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAE 448

Query: 241 ELQNEMMGRG 250
            L  EM  +G
Sbjct: 449 NLFEEMSEKG 458



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 64/132 (48%)

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           +  + +LI+ L     + + R +F E+  R ++   +A  +LI  +      +E L +  
Sbjct: 148 IECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWR 207

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
           RM E G+D  L  Y  LV GL     ++ A  +F  M G  I+PD +    ++K + + G
Sbjct: 208 RMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAG 267

Query: 235 NMDEAIELQNEM 246
            + +A+E   +M
Sbjct: 268 KLQKAMEKFRDM 279


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 3/211 (1%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +T +CT L++   K G+   A+ LLDEM  S     +V F V+I+GLC+   + EA    
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMPCSP---DMVAFTVVINGLCREKRLDEAFSVL 64

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            R    G  P+   Y   IDGLCK   ++ A  L  +M ++  +P T  YTAL+DG LK 
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               EA+ +  +M E G    L  YT ++ GLS+ G ++EAR +F +M+G G  PD  + 
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
            +L+    + G +DEA+   N+M+  G   G
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARG 215



 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 127/250 (50%), Gaps = 1/250 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +  + D   Y  +I G         +  +  +M ++G   +TV    ++D   KAG 
Sbjct: 350 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 409

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA +    M +     TVVT+  L+DG C  G V  A++ F RM D G  PN+  Y  
Sbjct: 410 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 469

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH-ESFKEALNLKNRMTEV 179
           +I GLC+   + +A   F+++ +R + PD   + + + G  +  ++  + + L   M   
Sbjct: 470 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQ 529

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   +L++Y+ L+ G+ R G L+    +FHEM+ RG+ PD ++  +L++     G +DEA
Sbjct: 530 GTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 589

Query: 240 IELQNEMMGR 249
           +E+  E+  R
Sbjct: 590 LEVFRELERR 599



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 1/248 (0%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            + ++ D+ ++  +I  LC     ED+     E+ ++ L         L+ A  KA    
Sbjct: 213 ARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL-DDSLDLTHFTFNPLVAALCKAERTE 271

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA++ + +M + R   T+ T+  L+DG  K G + EA+       + G  P+   YT++I
Sbjct: 272 EAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSII 331

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK   +E     F EM  R   PD   Y ALIDG++K +   +A  +  +M + G  
Sbjct: 332 DGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTV 391

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           +    Y  ++ GL + G + EA   F  M  RG +   +   +L+      GN+  A+EL
Sbjct: 392 VSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVEL 451

Query: 243 QNEMMGRG 250
              M+ RG
Sbjct: 452 FRRMLDRG 459



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 120/236 (50%), Gaps = 7/236 (2%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            ++ GLC   + + + LLL EM     + + V  T +++   +     EA S+L+  + +
Sbjct: 14  ALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRA 70

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
             E   VT+ V IDGLCK+  V +A     +M +    P    YTAL+DGL K   ++ A
Sbjct: 71  GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEA 130

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             + ++M ++   P    YT +IDG  K    +EA  +   M   G   D   YT+L+ G
Sbjct: 131 MAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISG 190

Query: 195 LSRCGHLQEARVLFHEMI----GRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L++ G L EA V  ++M+     RG+ PD ++   ++++    GN+++A+   +E+
Sbjct: 191 LAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDEL 246



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 5/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K     L  Y  +I GL    + E+++ +  +M  NG   +  + T L+    K G+
Sbjct: 137 MVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGK 196

Query: 61  PSEALSLLDEMLDS----RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
             EAL  L++M+++     +E  VV   ++I  LC SG + +A+ YF  + D  L     
Sbjct: 197 LDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD-SLDLTHF 255

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +  L+  LCK    E A     +M +R   P    YT+L+DG+LK     EAL      
Sbjct: 256 TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEA 315

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G   D   YTS++ GL + G ++E    FHEM  RG  PD +   +L+    +   +
Sbjct: 316 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 375

Query: 237 DEAIELQNEMMGRG 250
            +A  +  +M+  G
Sbjct: 376 PKAHRVYRQMLQSG 389



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 1/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +++ G     + +++ L L E  E G   + V  T+++D   K G   E      EM 
Sbjct: 292 YTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 351

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   E   VT+  LIDG  K+ ++ +A   + +M   G   +   Y  ++DGLCK   + 
Sbjct: 352 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 411

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F  M +R  +     Y+AL+DG+    +   A+ L  RM + G + +L +Y  ++
Sbjct: 412 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 471

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER-GNMDEAIELQNEMMGRG 250
            GL R G L +A   F +++ R + PD     S L    +R   + + +EL   M+ +G
Sbjct: 472 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQG 530



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 4/207 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +  +I GLC E + +++  +L      G   + V     +D   KA    +A  LL
Sbjct: 40  DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 99

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M + +   T VT+  L+DGL K+G + EA+    +M + G  P +  YT +IDGL K 
Sbjct: 100 KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKA 159

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE----VGVDLD 184
             +E AR +F +M      PD   YTALI G  K     EAL   N+M E     GV+ D
Sbjct: 160 GRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPD 219

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +  +  ++  L   G+L++A   F E+
Sbjct: 220 VVIHNLVIRQLCASGNLEDALAYFDEL 246



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 37/242 (15%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+ GLC   +  ++      M+E G  A  V  + LMD +   G  S A+ L   ML
Sbjct: 397 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRML 456

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF----------------- 109
           D   E  +V++ ++I GLC++G + +A  YF ++      PD                  
Sbjct: 457 DRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTV 516

Query: 110 -------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
                        G  PN+  Y+ L+DG+C+   +E    +F EM  R + PD   +  L
Sbjct: 517 GDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTL 576

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           I          EAL +   +       D  +Y SL+  LSRC  ++EAR+L   M  +G 
Sbjct: 577 IRWLCIAGRVDEALEVFRELERRSAP-DAWSYWSLLDALSRCERMEEARLLSFHMKLQGC 635

Query: 217 LP 218
            P
Sbjct: 636 AP 637


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 132/249 (53%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ ++ +Y TII  +C      ++  L SEM   G++ + V  + L+  +   G+ +
Sbjct: 189 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLN 248

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L ++M+   I   V TF +L+DG CK G V+EA +    M   G+ P+V  Y +L+
Sbjct: 249 DAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLM 308

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C    + +A+++F+ M +  +  +  +Y  +I+G+ K +   EA+NL   M    + 
Sbjct: 309 DGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNII 368

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y SL+ GL + G +  A  L  EM  RG+  D+I   S+L    +   +D+AI L
Sbjct: 369 PDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 428

Query: 243 QNEMMGRGL 251
             +M   G+
Sbjct: 429 LTKMKDEGI 437



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 127/239 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  LL  +    +  N V+  T++D+  K    +EA  L  EM+
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 223

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G C  G + +AI  F +M    ++P+V  ++ L+DG CK+  ++
Sbjct: 224 SKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVK 283

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+N+   M K+ + PD   Y +L+DGY   +   +A ++ N M + GV  ++ +Y  ++
Sbjct: 284 EAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   + EA  LF EM  + I+PD +   SL+    + G +  A++L +EM  RG+
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGV 402



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 121/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y  +I G CI  K  D+  L ++M    +  +    + L+D + K G 
Sbjct: 222 MVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGR 281

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L  M+   I+  VVT+C L+DG C    V +A   F  M   G+  NV  Y  
Sbjct: 282 VKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNI 341

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK   ++ A NLF EM  +++IPD   Y +LIDG  K      AL L + M + G
Sbjct: 342 MINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 401

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y S++  L +   + +A  L  +M   GI PD      L+    + G + +A 
Sbjct: 402 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQ 461

Query: 241 ELQNEMMGRG 250
            +  +++ +G
Sbjct: 462 NIFEDLLVKG 471



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 132/260 (50%), Gaps = 8/260 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK D+  Y +++ G C+  +   +K + + M + G+TAN      +++ + K  +
Sbjct: 292 MMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKK 351

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L  EM    I   VVT+  LIDGLCKSG +  A+     M D G+  +   Y +
Sbjct: 352 VDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNS 411

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D LCK + +++A  L  +M    + PD   YT LIDG  K    K+A N+   +   G
Sbjct: 412 ILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKG 471

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNM 236
            ++ +  YT ++ G        +A  L  +M   G +P+    EI+ +SL    +E+   
Sbjct: 472 YNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSL----FEKDEN 527

Query: 237 DEAIELQNEMMGRGLLSGSK 256
           D A +L  EM+ RGLL G K
Sbjct: 528 DMAEKLLREMIARGLLFGWK 547



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 123/257 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I +DL  +  +I           S  + + + + G   N +  TTL+      G+
Sbjct: 82  MEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQ 141

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL   D+++     +  V +  LI+GLCK G    A+    R+    + PNV +Y  
Sbjct: 142 IHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNT 201

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID +CK   +  A +L+ EM  + + PD   Y+ALI G+       +A+ L N+M    
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE 261

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  ++ LV G  + G ++EA+ +   M+ +GI PD +   SL+  +     +++A 
Sbjct: 262 INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAK 321

Query: 241 ELQNEMMGRGLLSGSKN 257
            + N M   G+ +  ++
Sbjct: 322 SIFNTMAQGGVTANVQS 338



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 2/249 (0%)

Query: 5   NIKADLPLY--GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           NI    P++  G I+  L   + ++ +  L  EM+ NG+ ++ V    L++ + + G   
Sbjct: 49  NINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTH 108

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            + S+   +L    E   +T   LI GLC  G + +A+ +  ++   G H N   Y  LI
Sbjct: 109 FSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLI 168

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +GLCK      A  L   +  + + P+   Y  +ID   K +   EA +L + M   G+ 
Sbjct: 169 NGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGIS 228

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y++L+ G    G L +A  LF++MI   I PD      L+    + G + EA  +
Sbjct: 229 PDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNV 288

Query: 243 QNEMMGRGL 251
              MM +G+
Sbjct: 289 LAMMMKQGI 297


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 137/253 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D   +  ++WG     + EDS  LL ++  +GL  ++ +   ++ +   AG 
Sbjct: 378 MRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGR 437

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL E+L+  + ++VV F  LI    ++GL  +A + +  M   G  P+ +   +
Sbjct: 438 LDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNS 497

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+K  ++ AR L   M ++    +  AYT L+DGY K  + + A  L   M E G
Sbjct: 498 LLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERG 557

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D  A+T+L+ GLS+ G+++EA  +F EM   G +P+     SL++   + G + EA+
Sbjct: 558 IYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEAL 617

Query: 241 ELQNEMMGRGLLS 253
           +L+ EM  +GLLS
Sbjct: 618 KLEKEMRQKGLLS 630



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 124/244 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  LY  ++  LC   + +++  LL E+ E GLT + V   +L+ AY +AG   +A    
Sbjct: 421 DSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAY 480

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M+      +  T   L+ GLC+ G ++EA     RM + G   N   YT L+DG  K 
Sbjct: 481 RIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKM 540

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +E A+ L+ EM +R + PD  A+TALIDG  K  + +EA  +   M+ +G   +  AY
Sbjct: 541 NNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAY 600

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SL+ GL  CG + EA  L  EM  +G+L D      ++     RG M  AIE   +M  
Sbjct: 601 NSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQR 660

Query: 249 RGLL 252
            GLL
Sbjct: 661 IGLL 664



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 107/242 (44%), Gaps = 35/242 (14%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +++ GLC +   +++++LL  M E G   N V  T L+D YFK      A  L  EM + 
Sbjct: 497 SLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKER 556

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            I    V F  LIDGL K+G V EA + F  M   G  PN   Y +LI GLC    +  A
Sbjct: 557 GIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEA 616

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL------------------------ 170
             L  EM ++ ++ DT  +  +IDG+ +    K A+                        
Sbjct: 617 LKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGG 676

Query: 171 -----------NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
                       + N+M   G+D D+  Y + + G  R   + +A ++  ++I  GI+PD
Sbjct: 677 YCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPD 736

Query: 220 EI 221
            +
Sbjct: 737 TV 738



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 13/239 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG++ W L     F+D  ++    + + LT N +IC          GE     SLL  M 
Sbjct: 228 YGSV-WKL-----FKD--MIFKGPRPSNLTFNAMICGFCRQHRVVVGE-----SLLHLMP 274

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VVTF +LI+  C  G    AID+   M   G+ P+VA +T ++  LC++  + 
Sbjct: 275 KFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVV 334

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR LFD +    + P+   Y  L+DGY K     +A  L   M   GV  D   +  LV
Sbjct: 335 EARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILV 394

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           WG  + G ++++  L  ++I  G+  D  L   ++      G +DEA++L  E++ +GL
Sbjct: 395 WGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGL 453



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++  +  + TI+  LC E    +++ L   +++ G+  N  I  TLMD YFKA E
Sbjct: 308 MVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKARE 367

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L +EM  + +    VTF +L+ G  K G + ++      +   GL  + ++Y  
Sbjct: 368 VAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDV 427

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY----LKHESF---------- 166
           ++  LC    ++ A  L  E+ ++ +     A+ +LI  Y    L+ ++F          
Sbjct: 428 MVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCG 487

Query: 167 ---------------------KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                                +EA  L  RM E G  ++  AYT L+ G  +  +L+ A+
Sbjct: 488 FTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQ 547

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L+ EM  RGI PD +   +L+    + GN++EA E+  EM   G +
Sbjct: 548 FLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFV 594



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 113/245 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C + +    + LL  M +   + + V    L++A    G    A+  L  M+
Sbjct: 250 FNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMV 309

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S +E +V TF  ++  LC+ G V EA   F  + D G+ PN A+Y  L+DG  K   + 
Sbjct: 310 RSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVA 369

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L++EM    + PD   +  L+ G+ K+   +++  L   +   G+ LD + Y  +V
Sbjct: 370 QASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMV 429

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L   G L EA  L  E++ +G+    +   SL+  +   G  D+A E    M+  G  
Sbjct: 430 SSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFT 489

Query: 253 SGSKN 257
             S  
Sbjct: 490 PSSST 494



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 4/239 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  D   +  +I GL      E++  +  EM   G   N     +L+      G 
Sbjct: 553 MKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGR 612

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL L  EM    +     TF ++IDG C+ G ++ AI+ F  M   GL P++  +  
Sbjct: 613 VTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNI 672

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +  A  + ++M    + PD T Y   + GY +     +A+ + +++   G
Sbjct: 673 LIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAG 732

Query: 181 VDLDLNAYTSLVWGLSRCGH-LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
           +  D   Y +++ G+  C   L  A +L  +++  G +P+ ++  ++L  H+ +  M E
Sbjct: 733 IVPDTVTYNTMLSGI--CSDILDRAMILTAKLLKMGFIPN-VITTNMLLSHFCKQGMPE 788



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 91/205 (44%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           +  TL+  +   G   EAL +L  M    +   + +  +L+  L + G        F  M
Sbjct: 179 VLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDM 238

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G  P+   + A+I G C+++ +    +L   MPK    PD   +  LI+        
Sbjct: 239 IFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRT 298

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
             A++  + M   GV+  +  +T+++  L R G++ EAR LF  +   GI P+  +  +L
Sbjct: 299 WVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTL 358

Query: 227 LKKHYERGNMDEAIELQNEMMGRGL 251
           +  +++   + +A  L  EM   G+
Sbjct: 359 MDGYFKAREVAQASLLYEEMRTTGV 383



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/191 (20%), Positives = 85/191 (44%), Gaps = 1/191 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K + +D   +  II G C   + + +     +M+  GL  +      L+  Y KA +
Sbjct: 623 MRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFD 682

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  ++++M    ++  + T+   + G C+   + +A+    ++   G+ P+   Y  
Sbjct: 683 MVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNT 742

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ G+C  + ++RA  L  ++ K   IP+      L+  + K    ++AL    ++ E+ 
Sbjct: 743 MLSGICS-DILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLREIS 801

Query: 181 VDLDLNAYTSL 191
              D  +Y  L
Sbjct: 802 FGFDEISYRIL 812


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 122/254 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++  +  + T+I G+C     + ++ L   M E G+T +      L+    + G 
Sbjct: 142 MQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGR 201

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + ++M    ++   V F +LID  CK G     ++    M + G+ P+   Y A
Sbjct: 202 IEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNA 261

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLC+   ++ A  +  EM    + PDT  YT LIDGY K E    A+ +K  M   G
Sbjct: 262 IVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 321

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V LD   YT+L+ GLS+ G   +A  +  EM+  G+ PD      ++     +G++   +
Sbjct: 322 VGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGL 381

Query: 241 ELQNEMMGRGLLSG 254
            L  EM  +G   G
Sbjct: 382 RLLKEMQNKGRKPG 395



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 112/217 (51%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           ++ + GL     +   LM    + GE + A ++ DEM    +  TVV+F  +I G+C++G
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            +  A     RM + G+ P+V  Y ALI GLC+   IE AR +F++M  R M P+   +T
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LID + K    +  L L   M E GV  D   Y ++V GL R   L+ A  +  EM   
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G+ PD +   +L+  + +   +D A+E++  M+  G+
Sbjct: 286 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGV 322



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 117/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  YG +I GLC   + ED++ +  +M   G+  N V+ T L+DA+ K G+
Sbjct: 177 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 236

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L L  EM +  +    VT+  +++GLC++  ++ A      M   GL P+   YT 
Sbjct: 237 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 296

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  ++ A  +   M    +  D   YTALI G  K     +A  +   M E G
Sbjct: 297 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 356

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   YT ++    R G ++    L  EM  +G  P  +    ++    + G M  A 
Sbjct: 357 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNAD 416

Query: 241 ELQNEMMGRGL 251
            L N M+  G+
Sbjct: 417 MLLNAMINIGV 427



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 3/219 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ D   Y  I+ GLC     + +  ++ EM+  GL  +TV  TTL+D Y K  E
Sbjct: 247 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 306

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +   M+   + +  VT+  LI GL K+G   +A    G M + GL P+   YT 
Sbjct: 307 LDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTM 366

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  C+K  ++    L  EM  +   P    Y  +++G+ K    K A  L N M  +G
Sbjct: 367 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 426

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  D   Y  L+ G  + G + +   L      +G +PD
Sbjct: 427 VSPDDITYNILLDGHCKHGKVTDIEELKS---AKGTVPD 462



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 84/154 (54%)

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           EA  ++ ++ D GL P   ++  L+  L +   +  A+N+FDEM  R +     ++  +I
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G  +      A  L  RM+E GV  D+  Y +L+ GL R G +++AR +F +M GRG+ 
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P+ ++   L+  H ++G+ +  +EL  EM  RG+
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGV 252



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 3/214 (1%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
             G+      CT LM  +  A    EA +   ++LD+ +      F VL+  L + G + 
Sbjct: 77  RRGIRLEPTSCTGLMSRFPTA---PEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELA 133

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            A + F  M   G+   V  +  +I G+C+   ++ A  L   M +  + PD   Y ALI
Sbjct: 134 SAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALI 193

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G  +    ++A  +  +M   G+  +   +T L+    + G  +    L  EM  RG+ 
Sbjct: 194 QGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVR 253

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           PD +   +++       ++  A  +  EM   GL
Sbjct: 254 PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL 287


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 121/237 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC + + + ++ +++E ++     + V   TLM A F+ G   EAL+   +M 
Sbjct: 135 YNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT 194

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +     T+V+F  +I GLC++  + +A++ F  M D   HPN+  Y+ +IDGLCK + ++
Sbjct: 195 EEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLD 254

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ L D M      PD  AYT L+ G+        AL L  RM   G   D+  YT ++
Sbjct: 255 EAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVI 314

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
             L + G + +A  +F E++     P+ +   +L+  +     +DE  ++  EM  R
Sbjct: 315 DKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR 371



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 119/240 (49%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C  S  + +  LL EM   G+  N    + ++    + G  ++AL   D  L
Sbjct: 28  YNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASL 87

Query: 73  D-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYTALIDGLCKKNC 130
           + +  +  VV++  LI+GLCK G V  A D F +M    G  PN   Y AL+DGLCK++ 
Sbjct: 88  ELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDR 147

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           ++ AR +  E  KRD  PD   Y  L+    +     EAL    +MTE G    L ++ +
Sbjct: 148 LDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA 207

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++ GL R   L +A  +F+EMI R   P+ +    ++    +   +DEA +L + M+  G
Sbjct: 208 IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 267



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 1/243 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + D+  Y T+I GLC   + + +  L  +M    G   N      L+D   K      A 
Sbjct: 93  QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 152

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +++ E         VVT+  L+  L + G V EA+  F +M + G  P +  + A+I GL
Sbjct: 153 AVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 212

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   +  A  +F+EM  RD  P+   Y+ +IDG  K +   EA  L +RM   G   DL
Sbjct: 213 CRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDL 272

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            AYT LV G S  G L  A  L   M+ +G +PD +    ++ K  + G +D+A E+  E
Sbjct: 273 VAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRE 332

Query: 246 MMG 248
           ++ 
Sbjct: 333 LVA 335



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 38/253 (15%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + ++   D+  Y T++  L    + +++    ++M E G     V    ++    +A   
Sbjct: 159 RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRL 218

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF------ 109
           ++AL + +EM+D      +VT+ V+IDGLCKS  + EA     RM      PD       
Sbjct: 219 ADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPL 278

Query: 110 -----------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
                                  G  P+V  YT +ID LCK   ++ A  +F E+     
Sbjct: 279 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC 338

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P+   Y+ALI GY +     E   +   M E+    ++  Y +++WGLS     +EA  
Sbjct: 339 SPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYG 395

Query: 207 LFHEMIGRGILPD 219
           +F EM   G +PD
Sbjct: 396 MFREMSECGFVPD 408



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 3/195 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++   +L  Y  +I GLC   + ++++ LL  M   G   + V  T L+  +  AG 
Sbjct: 228 MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGR 287

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL LL  M+       VVT+ V+ID LCK G V +A + F  +      PNV  Y+A
Sbjct: 288 LDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSA 347

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+ + ++    +  EM  R   P+   Y  +I G    +  +EA  +   M+E G
Sbjct: 348 LIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECG 404

Query: 181 VDLDLNAYTSLVWGL 195
              D   Y  L   L
Sbjct: 405 FVPDARTYRGLKRAL 419


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 129/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ D   Y  +I G C +SK E++  L  +M   G   +     TL+ AY   G+
Sbjct: 265 MLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGK 324

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD+M    ++  +V++  +IDG CK+  +R+A +Y   + D GL PNV +Y A
Sbjct: 325 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 384

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  +   I  A +  + M    + P    Y +L+         +EA  + ++  E  
Sbjct: 385 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 444

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           VDL +  YT ++ G  + G + EA   F EM  RGI P+++   +L+  + + GN +EA 
Sbjct: 445 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEAS 504

Query: 241 ELQNEMMGRGLL 252
           +L +EM+G G++
Sbjct: 505 KLFDEMVGSGVI 516



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 113/250 (45%), Gaps = 1/250 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + +N+  +   Y  +I  LC   K +    +L+E+   GL    V    LMDA  K+G  
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA  L   M    +  +VVTF +LI+GL +     E       M   G+ PN  +Y  L
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I   C+K    +A  LFDEM  + M P    Y  +     K    + A  +   M  +G+
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 182

Query: 182 DLDLNAYTSLV-WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +    + ++V W L R   L+    + +EM+ RG+ P++ L  + +++  + G   EA+
Sbjct: 183 TVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAV 242

Query: 241 ELQNEMMGRG 250
            +  + + +G
Sbjct: 243 GIWFKTLNKG 252



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 1/182 (0%)

Query: 71  MLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           M +SR + +   ++  +I  LCK+G V    +    +   GL P V  Y  L+D LCK  
Sbjct: 1   MRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG 60

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +E A  L   M +  M P    +  LI+G  + E F E   +   M ++GV  +   Y 
Sbjct: 61  RVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYN 120

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+    R GH  +A  LF EM+ + + P  +    + K   + G M+ A  +  +M+  
Sbjct: 121 ELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSI 180

Query: 250 GL 251
           G+
Sbjct: 181 GM 182



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 117/266 (43%), Gaps = 18/266 (6%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K     Y  I   LC E + E ++ +L +M   G+T +  +  T++    +     E
Sbjct: 145 KKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLE 204

Query: 64  AL-SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR----------------- 105
           ++ S+ +EM+   +          +  LCK G  +EA+  + +                 
Sbjct: 205 SVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQT 264

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M + G+  +   Y  +I G CK + +E A  L  +M +R   PD   +  L+  Y     
Sbjct: 265 MLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGK 324

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            +E  +L ++M   G+  D+ +Y +++ G  +   +++A+    E++ RG+ P+  +  +
Sbjct: 325 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 384

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGL 251
           L+  +   G++  AI+    M   G+
Sbjct: 385 LIGGYGRNGDISGAIDAVETMKSNGI 410


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 135/250 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  ++  +  +I GLC E + + +  +LS M + G+  N V  T+LMD YF   E
Sbjct: 255 MSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKE 314

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  + + +    +   V ++ V+I+GLCK+ +V EA+  F  M    + PN   Y++
Sbjct: 315 VNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSS 374

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I    +L DE+  R    +   Y +L++G  K+    +A+ L  +M + G
Sbjct: 375 LIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG 434

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D++ YT+LV GL + G L++A+ ++ +++ +G   +  +   ++    + G  DEA+
Sbjct: 435 IQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEAL 494

Query: 241 ELQNEMMGRG 250
            L ++M   G
Sbjct: 495 SLLSQMEDNG 504



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 126/247 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  ++  + ++I+G CI  + +++  LL+EM  N +  N      L+D   K GE  +
Sbjct: 223 KKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKK 282

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+L  M+   +E  VVT+  L+DG      V +A   F  +   G+ PNV  Y+ +I+
Sbjct: 283 ATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMIN 342

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   ++ A  LF EM  ++M P+T  Y++LIDG  K     +  +L + +   G   
Sbjct: 343 GLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPA 402

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y SL+ GL +   + +A  L  +M   GI PD     +L+    + G + +A  + 
Sbjct: 403 NIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIY 462

Query: 244 NEMMGRG 250
            +++ +G
Sbjct: 463 QDLLCKG 469



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 126/246 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+ +Y  II   C +    D+  L SEM    +  N V   +L+  +   G+  EA+
Sbjct: 190 VRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAV 249

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL+EM  + +   V TF +LIDGLCK G V++A      M   G+ PNV  YT+L+DG 
Sbjct: 250 GLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGY 309

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
                + +A+++F+ +  R + P+  +Y+ +I+G  K++   EA+ L   M    +  + 
Sbjct: 310 FLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNT 369

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+SL+ GL + G + +   L  E+  RG   + I   SLL    +   +D+AI L  +
Sbjct: 370 VTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTK 429

Query: 246 MMGRGL 251
           M   G+
Sbjct: 430 MKDEGI 435



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 133/250 (53%), Gaps = 5/250 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGL---TANTVICTTLMDAYFKAGE 60
           K    D   YGT+I GLC   +   +  LL +++  GL     + ++ T ++D++ K   
Sbjct: 152 KRFHLDQVSYGTLINGLCKSGETRAALQLLRKIE--GLLLVRPDVIMYTAIIDSFCKDKL 209

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  EM+  +I   VVTF  LI G C  G ++EA+     M    ++PNV  +  
Sbjct: 210 VIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNI 269

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK+  +++A ++   M K+ + P+   YT+L+DGY   +   +A ++ N ++  G
Sbjct: 270 LIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRG 329

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++++Y+ ++ GL +   + EA  LF EM  + + P+ +   SL+    + G + +  
Sbjct: 330 VTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVW 389

Query: 241 ELQNEMMGRG 250
           +L +E+  RG
Sbjct: 390 DLIDEINNRG 399



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 1/213 (0%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   +TV   TL+      G+  EAL+  D ++  R  +  V++  LI+GLCKSG  R A
Sbjct: 118 GYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAA 177

Query: 100 IDYFGRMPDFGL-HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           +    ++    L  P+V +YTA+ID  CK   +  A +L+ EM  + + P+   + +LI 
Sbjct: 178 LQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIY 237

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           G+      KEA+ L N M+   V+ ++  +  L+ GL + G +++A  +   MI +G+ P
Sbjct: 238 GFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEP 297

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + +   SL+  ++    +++A  + N +  RG+
Sbjct: 298 NVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 70/138 (50%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A++  Y +++ GLC   + + +  LL++MK+ G+  +    TTL+D   K G   +A  +
Sbjct: 402 ANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRI 461

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             ++L     + +  + V+I+GLCK G   EA+    +M D G  P+   Y  LI  L K
Sbjct: 462 YQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFK 521

Query: 128 KNCIERARNLFDEMPKRD 145
            N   +A  L  EM  R+
Sbjct: 522 NNKNGKAVKLLREMIARE 539



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 1/184 (0%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+S   +M    I+  + TF +LI+       +  A     ++   G  P+      L+ 
Sbjct: 72  AISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLR 131

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE-VGVD 182
           GLC    ++ A N  D + ++    D  +Y  LI+G  K    + AL L  ++   + V 
Sbjct: 132 GLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVR 191

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  YT+++    +   + +A  L+ EMI + I P+ +   SL+      G + EA+ L
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGL 251

Query: 243 QNEM 246
            NEM
Sbjct: 252 LNEM 255



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 53/106 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I+ D+  Y T++ GLC   + +D++ +  ++   G   N  + T +++   K G 
Sbjct: 430 MKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGF 489

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
             EALSLL +M D+      VT+  LI  L K+    +A+     M
Sbjct: 490 FDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 129/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ D   Y  +I G C +SK E++  L  +M   G   +     TL+ AY   G+
Sbjct: 493 MLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGK 552

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD+M    ++  +V++  +IDG CK+  +R+A +Y   + D GL PNV +Y A
Sbjct: 553 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 612

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  +   I  A +  + M    + P    Y +L+         +EA  + ++  E  
Sbjct: 613 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 672

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           VDL +  YT ++ G  + G + EA   F EM  RGI P+++   +L+  + + GN +EA 
Sbjct: 673 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEAS 732

Query: 241 ELQNEMMGRGLL 252
           +L +EM+G G++
Sbjct: 733 KLFDEMVGSGVI 744



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 1/251 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + +N+  +   Y  +I  LC   K +    +L+E+   GL    V    LMDA  K+G  
Sbjct: 213 ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 272

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA  L   M    +  +VVTF +LI+GL +     E       M   G+ PN  +Y  L
Sbjct: 273 EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 332

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I   C+K    +A  LFDEM  + M P    Y  +     K    + A  +   M  +G+
Sbjct: 333 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 392

Query: 182 DLDLNAYTSLV-WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +    + ++V W L R   L+    + +EM+ RG+ P++ L  + +++  + G   EA+
Sbjct: 393 TVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAV 452

Query: 241 ELQNEMMGRGL 251
            +  + + +GL
Sbjct: 453 GIWFKTLNKGL 463



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 1/217 (0%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR-IEVTVVTFCVLIDGLCKSG 94
           +   G   +   C   ++A  +AG+   A  + DEM +SR + +   ++  +I  LCK+G
Sbjct: 176 LSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAG 235

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            V    +    +   GL P V  Y  L+D LCK   +E A  L   M +  M P    + 
Sbjct: 236 KVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFG 295

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LI+G  + E F E   +   M ++GV  +   Y  L+    R GH  +A  LF EM+ +
Sbjct: 296 ILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLK 355

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + P  +    + K   + G M+ A  +  +M+  G+
Sbjct: 356 KMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 392



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 114/241 (47%), Gaps = 1/241 (0%)

Query: 12  LYGTII-WGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           L+ T++ W L    + E    + +EM   G+  N  + T  M    K G+  EA+ +  +
Sbjct: 398 LFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFK 457

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
            L+  + V + T   LI GLC+   ++EA      M + G+  +   Y  +I G CK + 
Sbjct: 458 TLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSK 517

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +E A  L  +M +R   PD   +  L+  Y      +E  +L ++M   G+  D+ +Y +
Sbjct: 518 MEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGT 577

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++ G  +   +++A+    E++ RG+ P+  +  +L+  +   G++  AI+    M   G
Sbjct: 578 IIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNG 637

Query: 251 L 251
           +
Sbjct: 638 I 638



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 74/169 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I+     YG++++ +C     E++K + S+ +EN +    +  T ++  Y K G+
Sbjct: 633 MKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGK 692

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++  +EM    I    +T+  L+    KSG   EA   F  M   G+ P+   Y  
Sbjct: 693 MVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGT 752

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           LI    + N +++      E+    +  D   Y  L +G       KEA
Sbjct: 753 LIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNGINAPWCQKEA 801



 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 74/185 (40%), Gaps = 36/185 (19%)

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP---------------- 142
           A D F  +   G  P++    A ++ L +   ++ AR +FDEM                 
Sbjct: 169 AADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMI 228

Query: 143 --------------------KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
                               +  + P    Y  L+D   K    +EA  LK RM + G+ 
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             +  +  L+ GL+R     E  ++  EM   G+ P+E++   L+  H  +G+  +A+ L
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 348

Query: 243 QNEMM 247
            +EM+
Sbjct: 349 FDEMV 353


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  130 bits (328), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 130/252 (51%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +IK D+  +  +I  LC + +   +K +   M E G  +N V    L+D Y  AG+ ++A
Sbjct: 406 HIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKA 465

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L L  + +DS I     T+ VLI+GLCK  ++  A   F +    G  P V+ Y  L+  
Sbjct: 466 LELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMAS 525

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC+++ +E+ARNLF EM   +  PD  ++  +IDG LK    + A  L   M  + +  D
Sbjct: 526 LCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPD 585

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              ++ L+    + G L EA  L+  M+  G +PD +L  SLLK +  +G  ++ + +  
Sbjct: 586 NITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQ 645

Query: 245 EMMGRGLLSGSK 256
           +M  + ++  SK
Sbjct: 646 QMADKDVVLDSK 657



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 117/238 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++ G C       +  L   MK N L  + V   T+++   K     EA  L  EM 
Sbjct: 132 FNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK 191

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +   VTF  LIDG CK+G V E       M   GL  +V VY+ALI G C K  IE
Sbjct: 192 GGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIE 251

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           R + LF+EM ++++ P+   Y+ L++   K + +KEA  + + MT   V  D+ AYT L 
Sbjct: 252 RGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLA 311

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GLS+ G   +A  +   M+ RG  P+ +   +++    + G +D+A+ +   M  +G
Sbjct: 312 DGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKG 369



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 122/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D   Y T+I GLC   +  ++K L  EMK      N+V  + L+D + K G+
Sbjct: 155 MKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGD 214

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LL+EM    +E  V  +  LI G C  G +    + F  M    + PNV  Y+ 
Sbjct: 215 VEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSC 274

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++ LCKK   + A  + D M    + PD  AYT L DG  K+    +A+ + + M + G
Sbjct: 275 LMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRG 334

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + +   Y +++ GL + G + +A  +   M  +G  PD +   +L+K     G +DEA+
Sbjct: 335 EEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAV 394

Query: 241 ELQNEMMGR 249
           +L N +M +
Sbjct: 395 DLLNLLMSK 403



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 127/254 (50%), Gaps = 4/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+ +Y  +I G C +   E  K L +EM    +T N V  + LM+A  K  +
Sbjct: 225 MEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQK 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +LD M   ++   VV + VL DGL K+G   +AI     M   G  PN   Y A
Sbjct: 285 WKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNA 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM--TE 178
           +I+GLCK+  ++ A  + + M K+   PD   Y+ L+ G        EA++L N +   E
Sbjct: 345 IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY-ERGNMD 237
             +  D+ A+  ++  L +   L+ A+ +++ M+ RG  P  I+  ++L   Y   G + 
Sbjct: 405 FHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERG-FPSNIVTYNILIDGYLSAGKLT 463

Query: 238 EAIELQNEMMGRGL 251
           +A+EL  + +  G+
Sbjct: 464 KALELWKDAVDSGI 477



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 106/200 (53%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           + L++++    +PS A  +L  ++     + V  F +L+ G C+SG   +A+D F  M  
Sbjct: 98  SALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKR 157

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
             L P+   Y  +I+GLCK   +  A+ LF EM   +  P++  ++ALIDG+ K+   +E
Sbjct: 158 NCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEE 217

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
              L   M ++G++ D+  Y++L+ G    G ++  + LF+EM+ + + P+ +    L+ 
Sbjct: 218 GFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMN 277

Query: 229 KHYERGNMDEAIELQNEMMG 248
              ++    EA ++ + M G
Sbjct: 278 ALCKKQKWKEAAQMLDTMTG 297



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 2/248 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  ++ D+  Y  +  GL    +  D+  +L  M + G   N V    +++   K G 
Sbjct: 295 MTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--PDFGLHPNVAVY 118
             +AL +L+ M     +  VVT+  L+ GLC  G + EA+D    +   +F + P+V  +
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAF 414

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             +I  LCK+  +  A+ ++  M +R    +   Y  LIDGYL      +AL L     +
Sbjct: 415 NLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVD 474

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G+  +   YT L+ GL +   L  A+ LF++    G  P      +L+       ++++
Sbjct: 475 SGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQ 534

Query: 239 AIELQNEM 246
           A  L  EM
Sbjct: 535 ARNLFQEM 542



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 2/218 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KN+  ++  Y  ++  LC + K++++  +L  M    +  + V  T L D   K G  S+
Sbjct: 263 KNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASD 322

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ +LD M+    E   VT+  +I+GLCK G V +A+     M   G  P+V  Y+ L+ 
Sbjct: 323 AIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVK 382

Query: 124 GLCKKNCIERARNLFDEMPKRD--MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           GLC    I+ A +L + +  ++  + PD  A+  +I    K    + A  +   M E G 
Sbjct: 383 GLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGF 442

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             ++  Y  L+ G    G L +A  L+ + +  GI P+
Sbjct: 443 PSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPN 480



 Score = 37.7 bits (86), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 61/136 (44%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P+ +    LID L K    +   ++  +M    + P  T+ +ALI+ ++  +    A  +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              + + G  L++  +  L+ G  + G   +A  LF  M    ++PD +   +++    +
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 233 RGNMDEAIELQNEMMG 248
              + EA EL  EM G
Sbjct: 177 GKRLVEAKELFKEMKG 192


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 118/243 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  DL  Y T+I G C     E++  L  E    G   N +    L+    K G   E
Sbjct: 370 QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEE 429

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL+L DEM   R+E   + + +LI GLCK G V+ A   + +M      P+     A++ 
Sbjct: 430 ALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL 489

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K   I  ARN FD   + D++ D   Y  +IDGY++ +   EA+ L  +M E G+  
Sbjct: 490 GLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITP 549

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +  + +L+ G  R G L EAR +   +  +G++P  +   +L+  + E GNM E     
Sbjct: 550 SVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFL 609

Query: 244 NEM 246
           +EM
Sbjct: 610 HEM 612



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 35/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I   +  + T+I G C      +++ +L  ++  GL  + V  TTLM+AY + G 
Sbjct: 542 MIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGN 601

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E    L EM  + +  T VT+ VLI GLC+   + E++     M   GL P+   Y  
Sbjct: 602 MQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNT 661

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY-------------------- 160
           +I   CK   I +A  L++ M   +  P    Y  LI+                      
Sbjct: 662 IIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRN 721

Query: 161 --LKHESF-------------KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             LK  ++              +AL   N+M   G  + +  Y++++  L + G + EA+
Sbjct: 722 ITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAK 781

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
             F  M+  G+ PD  +C ++L   +++GN     E    ++  G +S
Sbjct: 782 YFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFIS 829



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 117/244 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ LY  +I G        ++  L  +M E G+T + V   TL++ + + G+  EA  +L
Sbjct: 515 DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKML 574

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + +    +  +VVT+  L++  C+ G ++E   +   M    + P    YT LI GLC++
Sbjct: 575 EVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQ 634

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +  +  L + M  + ++PD+  Y  +I  + K +   +AL L N M     D     Y
Sbjct: 635 NKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTY 694

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+  L   G L++   +   +  R I   +   ++++K H  +G + +A+   N+M+ 
Sbjct: 695 KVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHCAKGQVSKALGYFNQMLA 754

Query: 249 RGLL 252
           +G +
Sbjct: 755 KGFV 758



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 118/247 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D  +Y  +I GLC E   + +  L  +M+      +      ++   FK G 
Sbjct: 437 METLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGN 496

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA +  D      +   VV + ++IDG  +   + EA+  + +M + G+ P+V  +  
Sbjct: 497 ISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNT 556

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C++  +  AR + + +  + ++P    YT L++ Y +  + +E  +  + M    
Sbjct: 557 LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V      YT L+ GL R   + E+  L   M  +G+LPD +   ++++   +   + +A+
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676

Query: 241 ELQNEMM 247
           +L N M+
Sbjct: 677 QLYNMML 683



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 110/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC+    +++     +M+++G+  + V   TL   +   G  S A  ++ +ML
Sbjct: 309 YNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKML 368

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   +VT+  LI G C+ G + EA+         G   NV  Y  L+  LCK   IE
Sbjct: 369 LQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIE 428

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    + PD   Y+ LI G  K    + A  L  +M          A  +++
Sbjct: 429 EALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVL 488

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G++ EAR  F       ++ D +L   ++  +     + EA++L  +M+ RG+
Sbjct: 489 LGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGI 547



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 3/232 (1%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVIC-TTLMDAYFKAGEPSEALSLLDEMLDS 74
           +I GLC +SK ED+   L +   N +   +++   T+M  + K G    A S    M+ +
Sbjct: 243 LIHGLCEQSKLEDAISFLHD--SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKN 300

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +     ++ +L+ GLC +G + EA+ +   M   G+ P+V  Y  L  G      +  A
Sbjct: 301 GLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
           R +  +M  + + PD   YT LI G+ +  + +EAL L+      G  L++  Y  L+  
Sbjct: 361 RKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSC 420

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L + G ++EA  LF EM    + PD I+   L+    + G +  A +L  +M
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 15/218 (6%)

Query: 47  ICTTLMDAYFKAGEPSEALSLL------DEMLDSRIEVTV-------VTFCVLIDGLCKS 93
           +   + D  F+A  P+   SLL      D M D   E+ V        T  +LI GLC+ 
Sbjct: 192 VIAKMKDLNFQASVPTYN-SLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQ 250

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
             + +AI +     +  + P++     ++   CK   I+ AR+ F  M K  ++ D+ +Y
Sbjct: 251 SKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSY 309

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             L+ G     S  EAL   + M + GV+ D+  Y +L  G    G +  AR +  +M+ 
Sbjct: 310 NILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLL 369

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +G+ PD +   +L+  H + GN++EA++L+ E + RG 
Sbjct: 370 QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGF 407



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 100/225 (44%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           TI+   C     + ++     M +NGL  ++     L+     AG   EAL   D+M   
Sbjct: 276 TIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKH 335

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +E  VVT+  L  G    GL+  A     +M   GL+P++  YT LI G C+   IE A
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L  E   R    +   Y  L+    K    +EAL L + M  + ++ D   Y+ L+ G
Sbjct: 396 LKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHG 455

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           L + G +Q A  L+ +M  +   P      ++L   ++ GN+ EA
Sbjct: 456 LCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEA 500


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 124/250 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  ++ +   YG +I G C   + E +++LL++M+  G+  N +I  T++D Y + G   
Sbjct: 310 GNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVD 369

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL +   M    +E+ + T+  L  GLC+   + EA      M + G+ PN   YT LI
Sbjct: 370 DALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLI 429

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
              CK   +  AR LF EM ++   P    Y  +IDGY K  S +EA   +  M + G  
Sbjct: 430 SIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFV 489

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y SLV G    G +  A  LF EM  RG  P+ +   +L+    + G  + A +L
Sbjct: 490 PDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQL 549

Query: 243 QNEMMGRGLL 252
            ++M+  GL+
Sbjct: 550 YDDMLKAGLI 559



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 36/276 (13%)

Query: 11  PLYGTIIW-GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           PL  +++  GLC   + +D++ LL +M  +G++ N +   +L+D Y +  +      +L+
Sbjct: 177 PLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILE 236

Query: 70  EMLDSRIEVTVVTFCVLIDGL-----------------------------------CKSG 94
            M +  IE TV T+ +L+D L                                   C++G
Sbjct: 237 IMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAG 296

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            +R A          G+ PN   Y  LI+G CK   +E A  L  +M  + +  +   + 
Sbjct: 297 NMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFN 356

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +IDGY +     +AL +K  M ++GV+LD+  Y +L  GL R   L EA+ L H MI  
Sbjct: 357 TMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEM 416

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G++P+ +   +L+  H + G+M EA  L  EM  +G
Sbjct: 417 GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 452



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 116/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  N+  D+ LY  +I   C       +  +L E   NG+  N      L++ + K G+
Sbjct: 273 MKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQ 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL +M    + +  + F  +IDG C+ G+V +A+     M   G+  ++  Y  
Sbjct: 333 MEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNT 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L  GLC+ N ++ A+ L   M +  ++P+   YT LI  + K     EA  L   M E G
Sbjct: 393 LACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 452

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  Y  ++ G ++ G ++EA     EM  +G +PD     SL+  H   G +D A+
Sbjct: 453 ATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 512

Query: 241 ELQNEMMGRG 250
           +L  EM  RG
Sbjct: 513 KLFEEMKQRG 522



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 104/195 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y T+  GLC  ++ +++K LL  M E G+  N V  TTL+  + K G+
Sbjct: 378 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGD 437

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM +     +VVT+ V+IDG  K G +REA  +   M   G  P+V  Y +
Sbjct: 438 MVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYAS 497

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    ++ A  LF+EM +R   P+  AYTALI G  K    + A  L + M + G
Sbjct: 498 LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG 557

Query: 181 VDLDLNAYTSLVWGL 195
           +  D + Y++LV  L
Sbjct: 558 LIPDDSLYSALVGSL 572



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I+A +  Y  ++  L         + L +EMK N +  +  + T +++AY +AG 
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +LDE + + +E    T+ VLI+G CK G +  A      M   G+  N  ++  
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG C+K  ++ A  +   M K  +  D   Y  L  G  +     EA  L + M E+G
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   YT+L+    + G + EAR LF EM  +G  P  +    ++  + ++G++ EA 
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAE 477

Query: 241 ELQNEMMGRGLL 252
             + EM  +G +
Sbjct: 478 RFRKEMEKKGFV 489



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 36/230 (15%)

Query: 58  AGEPSEALSLLDEMLDS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN-- 114
           AG  ++A  LL+  L S    V+ +   V++DGLCKSG V +A      MP  G+  N  
Sbjct: 154 AGRLADAAGLLERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNAL 213

Query: 115 ---------------------------------VAVYTALIDGLCKKNCIERARNLFDEM 141
                                            V  YT L+D L     I +   LF+EM
Sbjct: 214 CYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEM 273

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
              +++ D   YTA+I+ Y +  + + A  + +     GV+ +   Y  L+ G  + G +
Sbjct: 274 KANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQM 333

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + A +L  +M G+G+  ++I+  +++  +  +G +D+A++++  M   G+
Sbjct: 334 EAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGV 383



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 55/129 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K     +  Y  +I G   +    +++    EM++ G   +     +L+  +   G+
Sbjct: 448 MAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGK 507

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L +EM     E  VV +  LI GL K G    A   +  M   GL P+ ++Y+A
Sbjct: 508 VDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSA 567

Query: 121 LIDGLCKKN 129
           L+  L   N
Sbjct: 568 LVGSLHTDN 576


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 123/246 (50%), Gaps = 1/246 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +A+   Y T++ GL    + ED+ ++L +M++ G   + V   TL+D +FK     EA+ 
Sbjct: 575 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 634

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL EML++    +VVT+  L  GLC+SG   EA++    M   G  PN   Y++++DGLC
Sbjct: 635 LLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC 694

Query: 127 KKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           K   +  A   F++M + +++ P   AY+ALIDG  K     EA     RM   G   D+
Sbjct: 695 KAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDV 754

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             ++ L+ GL   G +     LF  M  RG   D     +++  +  +G    A  L  E
Sbjct: 755 VTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEE 814

Query: 246 MMGRGL 251
           M   G+
Sbjct: 815 MKTHGI 820



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/249 (32%), Positives = 126/249 (50%), Gaps = 3/249 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +  + ++  Y T+I GL   +K +++  LL++M E G  ANTV  +T++D   K G   +
Sbjct: 537 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 596

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ +L +M D+      VT+  LIDG  K   +REA+     M + G HP+V  YT L  
Sbjct: 597 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 656

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT--EVGV 181
           GLC+    + A  + D M  R   P+   Y++++DG  K     EAL    +M   EV V
Sbjct: 657 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV-V 715

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
              + AY++L+ GL + G + EA      MI  G +PD +    L+    + G +D  +E
Sbjct: 716 APHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 775

Query: 242 LQNEMMGRG 250
           L   M  RG
Sbjct: 776 LFCGMAERG 784



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 22/261 (8%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           + T+I GLC   +   +  +   M    G++ N      L++   KAG+        ++M
Sbjct: 384 FSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQM 443

Query: 72  LDSR------------------IEV---TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+                    ++V   T+VT+  L+ GL KSG+VR+A+     M + G
Sbjct: 444 LEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESG 503

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           L P+V  + +++DGLCK+  I  A N+F    +R   P+   Y+ LIDG  K     EAL
Sbjct: 504 LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEAL 563

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L  +M E+G   +   Y+++V GL + G +++A V+  +M   G LPD +   +L+   
Sbjct: 564 QLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGF 623

Query: 231 YERGNMDEAIELQNEMMGRGL 251
           ++R  + EA+ L  EM+  G 
Sbjct: 624 FKRQRLREAVGLLREMLEAGF 644



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 110/234 (47%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +  L  Y T++ GL       D+  LL  M E+GL+ + +   +++D   K     +A +
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 529

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +    L+      VVT+  LIDGL K   + EA+    +M + G   N   Y+ ++DGL 
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +E A  +  +M     +PD   Y  LIDG+ K +  +EA+ L   M E G    + 
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            YT+L  GL R G   EA  +   M  RG  P+ I   S++    + G + EA+
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 703



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 1/246 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  + +++ GLC E +  D+  +     E G   N V  +TL+D   K  +  EAL
Sbjct: 504 LSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEAL 563

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL +M++       VT+  ++DGL K G + +A+    +M D G  P+   Y  LIDG 
Sbjct: 564 QLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGF 623

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K+  +  A  L  EM +    P    YT L  G  +   F EA+ + + M   G   + 
Sbjct: 624 FKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNA 683

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS-LLKKHYERGNMDEAIELQN 244
             Y+S+V GL + G + EA   F +M    ++   ++  S L+    + G +DEA E   
Sbjct: 684 ITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLE 743

Query: 245 EMMGRG 250
            M+  G
Sbjct: 744 RMIRAG 749



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 108/230 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC +++ +    LL EM   G   N V   TL++A    G   EA SLL+ M 
Sbjct: 39  YSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMA 98

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +     ++TF ++I GLCK G +  A      M D G  P+V ++T L+  LC+   ++
Sbjct: 99  ANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVD 158

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F ++      PD   Y  ++DG  K    + A  +   + E      +  +T  V
Sbjct: 159 EAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAV 218

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            GLS+ G+L  A   F  M   G+ P+ +   +L+    + G +D A+ L
Sbjct: 219 DGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGL 268



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 86/160 (53%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           +VT+ VLI+GLCK+G V +A   F +   FG  P V  Y+ +IDGLC+ N +++   L +
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM  R   P+   Y  L++  L     KEA +L  RM   G   +L  +  ++ GL + G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            ++ A  +  EM+ RG +PD  +   LL    E G +DEA
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEA 160



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 105/205 (51%)

Query: 46  VICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
           V   TL+    K+G   +AL LL+ M++S +   V+TF  ++DGLCK   + +A + F R
Sbjct: 474 VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 533

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
             + G  PNV  Y+ LIDGL K   ++ A  L  +M +     +T  Y+ ++DG LK   
Sbjct: 534 ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGR 593

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            ++A+ +  +M + G   D   Y +L+ G  +   L+EA  L  EM+  G  P  +   +
Sbjct: 594 MEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTT 653

Query: 226 LLKKHYERGNMDEAIELQNEMMGRG 250
           L       G  DEA+E+ + M  RG
Sbjct: 654 LCHGLCRSGRFDEAVEILDYMAARG 678



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 11/243 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+  GLC   +F+++  +L  M   G   N +  ++++D   KAG  +EAL   ++M 
Sbjct: 651 YTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMA 710

Query: 73  -DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            D  +   V+ +  LIDGLCK+G + EA ++  RM   G  P+V  ++ LI+GLC    I
Sbjct: 711 RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 770

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +    LF  M +R    D  AY A+I+ Y     F  A  L   M   G+  +   +  +
Sbjct: 771 DTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIV 830

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILP----DEILCISLLKKHYERGNMDEAIELQNEMM 247
           +  L     + EA   FH       +P    DEI   +L+         ++A+EL   M+
Sbjct: 831 IKALCGNDRIDEAVSYFHS------IPEDCRDEISYNTLITSLVASRRSEQALELLRAMV 884

Query: 248 GRG 250
             G
Sbjct: 885 ADG 887



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 2/234 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +  +I GLC   + +    L   M E G  A+      +++AY   GE S A +LL
Sbjct: 753 DVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALL 812

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM    I    VT  ++I  LC +  + EA+ YF  +P+      ++ Y  LI  L   
Sbjct: 813 EEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE-DCRDEIS-YNTLITSLVAS 870

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              E+A  L   M      PD   Y  ++DG  K  S + A  L   M   G   DL  Y
Sbjct: 871 RRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTY 930

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           T ++ GLS+   L  A   F EM+ + + PD I+  SL+    +   +D+A +L
Sbjct: 931 TIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL 984



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 36/279 (12%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTV--------IC---- 48
            M  +  KAD+  Y  +I   C++ +F  +  LL EMK +G+  NTV        +C    
Sbjct: 780  MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDR 839

Query: 49   ---------------------TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLI 87
                                  TL+ +   +    +AL LL  M+          +  ++
Sbjct: 840  IDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVM 899

Query: 88   DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
            DGL K+G    A      M   G  P++  YT +I GL K   +  A + F+EM ++++ 
Sbjct: 900  DGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLK 959

Query: 148  PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
            PD   Y++LID + K +   +A  L   +   G++  +  Y+++V  L +     +A  +
Sbjct: 960  PDAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEV 1016

Query: 208  FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
              EM  +   P   +  SL   +   G +DEA++L N++
Sbjct: 1017 IREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 23/275 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAG 59
           MK     AD+  Y  ++ GLC   +  ++   +  M+   G + N V  +TL+     AG
Sbjct: 336 MKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG 395

Query: 60  EPSEALSLLDEMLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--------PDFG 110
             ++A  + + M+    I     T+  L++GLCK+G  R     F +M          + 
Sbjct: 396 RVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWP 455

Query: 111 LH-------------PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +H             P +  Y  L+ GL K   +  A  L + M +  + PD   + +++
Sbjct: 456 IHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVL 515

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DG  K +   +A N+  R  E G   ++  Y++L+ GLS+   + EA  L  +M+  G  
Sbjct: 516 DGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCR 575

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            + +   +++    + G M++A+ +  +M   G L
Sbjct: 576 ANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCL 610



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 99/239 (41%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC   +  D+     +  + G     V  +T++D   +  E  +   LL+EM 
Sbjct: 4   YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   VT+  L++ L   G  +EA     RM   G  P +  +  +I GLCK+  IE
Sbjct: 64  GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + DEM  R  +PD   +T L+    +     EA     ++  +G   D   Y ++V
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G L+ A ++   +      P        +    + GN+  A E  + M   G+
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 84/194 (43%)

Query: 46  VICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
           V    L++   KAG   +A +   + +      TVVT+  +IDGLC+   V +       
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M   G  PN   Y  L++ L  +   + A +L + M      P+   +  +I G  K   
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            + A  + + M + G   D+  +T L+  L   G + EA   F +++  G  PD +   +
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 226 LLKKHYERGNMDEA 239
           ++   Y+ G ++ A
Sbjct: 182 MVDGLYKAGRLEAA 195



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 8/216 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  +   Y  +I GLC   K +   + L  +++    A     ++L+    +A  
Sbjct: 237 MPQTGVSPNTVTYDALIDGLCKAGKLD---IALGLLRDKNSQAGMFAFSSLLHGLCQAHR 293

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL  M        VV F  L++GLC++  V EA + F  M + G   +V  Y  
Sbjct: 294 LEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNI 350

Query: 121 LIDGLCKKNCIERARNLFDEMPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L+ GLCK   I  A    + M + +   P+   ++ LI G        +A  +  RM  V
Sbjct: 351 LLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAV 410

Query: 180 -GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            G+  +   Y  L+ GL + G  +     F +M+ R
Sbjct: 411 EGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLER 446


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 118/243 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  DL  Y T+I G C     E++  L  E    G   N +    L+    K G   E
Sbjct: 370 QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEE 429

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL+L DEM   R+E   + + +LI GLCK G V+ A   + +M      P+     A++ 
Sbjct: 430 ALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLL 489

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K   I  ARN FD   + D++ D   Y  +IDGY++ +   EA+ L  +M E G+  
Sbjct: 490 GLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITP 549

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +  + +L+ G  R G L EAR +   +  +G++P  +   +L+  + E GNM E     
Sbjct: 550 SVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFL 609

Query: 244 NEM 246
           +EM
Sbjct: 610 HEM 612



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 35/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I   +  + T+I G C      +++ +L  ++  GL  + V  TTLM+AY + G 
Sbjct: 542 MIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGN 601

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E    L EM  + +  T VT+ VLI GLC+   + E++     M   GL P+   Y  
Sbjct: 602 MQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNT 661

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY-------------------- 160
           +I   CK   I +A  L++ M   +  P    Y  LI+                      
Sbjct: 662 IIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRN 721

Query: 161 --LKHESF-------------KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             LK  ++              +AL   N+M   G  + +  Y++++  L + G + EA+
Sbjct: 722 ITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAK 781

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
             F  M+  G+ PD  +C ++L   +++GN     E    ++  G +S
Sbjct: 782 YFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFIS 829



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 118/244 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ LY  +I G        ++  L  +M E G+T + V   TL++ + + G+  EA  +L
Sbjct: 515 DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKML 574

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + +    +  +VVT+  L++  C+ G ++E   +   M    + P    YT LI GLC++
Sbjct: 575 EVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQ 634

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +  +  L + M  + ++PD+  Y  +I  + K +   +AL L N M     D     Y
Sbjct: 635 NKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTY 694

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+  L   G L++   +   +  R I   ++  ++++K H  +G + +A+   N+M+ 
Sbjct: 695 KVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHCAKGQVSKALGYFNQMLA 754

Query: 249 RGLL 252
           +G +
Sbjct: 755 KGFV 758



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 118/247 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D  +Y  +I GLC E   + +  L  +M+      +      ++   FK G 
Sbjct: 437 METLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGN 496

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA +  D      +   VV + ++IDG  +   + EA+  + +M + G+ P+V  +  
Sbjct: 497 ISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNT 556

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C++  +  AR + + +  + ++P    YT L++ Y +  + +E  +  + M    
Sbjct: 557 LINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANA 616

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V      YT L+ GL R   + E+  L   M  +G+LPD +   ++++   +   + +A+
Sbjct: 617 VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKAL 676

Query: 241 ELQNEMM 247
           +L N M+
Sbjct: 677 QLYNMML 683



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 3/232 (1%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVIC-TTLMDAYFKAGEPSEALSLLDEMLDS 74
           +I GLC +SK ED+   L +   N +   +++   T+M  + K G    A S    M+ +
Sbjct: 243 LIHGLCEQSKLEDAISFLHD--SNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKN 300

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +     ++ +L+ GLC +G + EA+ +   M   G+ P+V  Y  L  G      +  A
Sbjct: 301 GLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGA 360

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
           R +  +M  + + PD   YT LI G+ +  + +EAL L+      G  L++  Y  L+  
Sbjct: 361 RKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSC 420

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L + G ++EA  LF EM    + PD I+   L+    + G +  A +L  +M
Sbjct: 421 LCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 110/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC+    +++     +M+++G+  + V   TL   +   G  S A  ++ +ML
Sbjct: 309 YNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKML 368

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   +VT+  LI G C+ G + EA+         G   NV  Y  L+  LCK   IE
Sbjct: 369 LQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIE 428

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    + PD   Y+ LI G  K    + A  L  +M          A  +++
Sbjct: 429 EALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVL 488

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G++ EAR  F       ++ D +L   ++  +     + EA++L  +M+ RG+
Sbjct: 489 LGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGI 547



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 15/218 (6%)

Query: 47  ICTTLMDAYFKAGEPSEALSLL------DEMLDSRIEVTV-------VTFCVLIDGLCKS 93
           +   + D  F+A  P+   SLL      D M D   E+ V        T  +LI GLC+ 
Sbjct: 192 VIAKMKDLNFQASVPTYN-SLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQ 250

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
             + +AI +     +  + P++     ++   CK   I+ AR+ F  M K  ++ D+ +Y
Sbjct: 251 SKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSY 309

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             L+ G     S  EAL   + M + GV+ D+  Y +L  G    G +  AR +  +M+ 
Sbjct: 310 NILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLL 369

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +G+ PD +   +L+  H + GN++EA++L+ E + RG 
Sbjct: 370 QGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGF 407



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 100/225 (44%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           TI+   C     + ++     M +NGL  ++     L+     AG   EAL   D+M   
Sbjct: 276 TIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKH 335

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +E  VVT+  L  G    GL+  A     +M   GL+P++  YT LI G C+   IE A
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L  E   R    +   Y  L+    K    +EAL L + M  + ++ D   Y+ L+ G
Sbjct: 396 LKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHG 455

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           L + G +Q A  L+ +M  +   P      ++L   ++ GN+ EA
Sbjct: 456 LCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEA 500


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 131/250 (52%), Gaps = 2/250 (0%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+  K ++ +Y TII  LC      ++  L SEM   G++AN V    ++  + K+    
Sbjct: 203 GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVD 262

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL+L  EM    +  T+VT+  L+DGLCKSG +    +    M D G+  +V  Y +LI
Sbjct: 263 EALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLI 322

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK   ++RA  LF++M  +D   D   +T L+DG  K    K+A  +   +     D
Sbjct: 323 DGLCKNGHLDRAIALFNKM--KDXRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYD 380

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD+  Y  ++ G  + G L+EA  +  +M   G +P  +    ++   +E+   D+A +L
Sbjct: 381 LDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKL 440

Query: 243 QNEMMGRGLL 252
            +EM+ RGLL
Sbjct: 441 LHEMIARGLL 450



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 2/217 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I A++  Y  +I G C     +++  L  EM +  +    V   +LMD   K+G 
Sbjct: 236 MTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGR 295

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S    L+DEM D  I   V+T+  LIDGLCK+G +  AI  F +M D     +   +T 
Sbjct: 296 ISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF--DRLTFTI 353

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   ++ A+ +F ++  ++   D   Y  +I+GY K    +EAL ++++M + G
Sbjct: 354 LLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNG 413

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
                  +  ++  L       +A  L HEMI RG+L
Sbjct: 414 CIPSAVTFEIIINALFEKDENDKAEKLLHEMIARGLL 450



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 118/243 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ D      ++   C   +      +L+++ + G   +T+  TTL+      G+ ++
Sbjct: 99  KGIQPDFFTLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNK 158

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL   D++L   I+   V++  LI+G+CK G  R AI    ++      PNV +Y  +ID
Sbjct: 159 ALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIID 218

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK   +  A  LF EM  + +  +  +Y  +I G+ K +   EALNL   M +  +  
Sbjct: 219 ALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVP 278

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +  Y SL+ GL + G +     L  EM  RGI  D I   SL+    + G++D AI L 
Sbjct: 279 TIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALF 338

Query: 244 NEM 246
           N+M
Sbjct: 339 NKM 341



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 94/211 (44%)

Query: 42  TANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           T   +    ++D++      S A+SL   +    I+    T  +L++  C  G +     
Sbjct: 67  TPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFS 126

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
              ++   G  P+   +T LI GLC K  + +A +  D++  + +  D  +Y  LI+G  
Sbjct: 127 VLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVC 186

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           K    + A+ L  ++       ++  Y +++  L +   + EA  LF EM  +GI  + +
Sbjct: 187 KIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVV 246

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               ++K   +   +DEA+ L  EM  + ++
Sbjct: 247 SYNIMIKGFCKSKMVDEALNLFKEMHQKNMV 277


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 121/237 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC + + + ++ +++E ++     + V   TLM A F+ G   EAL+   +M 
Sbjct: 85  YNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT 144

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +     T+V+F  +I GLC++  + +A++ F  M D   HPN+  Y+ +IDGLCK + ++
Sbjct: 145 EEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLD 204

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ L D M      PD  AYT L+ G+        AL L  RM   G   D+  YT ++
Sbjct: 205 EAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVI 264

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
             L + G + +A  +F E++     P+ +   +L+  +     +DE  ++  EM  R
Sbjct: 265 DKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR 321



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 1/243 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + D+  Y T+I GLC   + + +  L  +M    G   N      L+D   K      A 
Sbjct: 43  QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAAR 102

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +++ E         VVT+  L+  L + G V EA+  F +M + G  P +  + A+I GL
Sbjct: 103 AVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGL 162

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   +  A  +F+EM  RD  P+   Y+ +IDG  K +   EA  L +RM   G   DL
Sbjct: 163 CRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDL 222

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            AYT LV G S  G L  A  L   M+ +G +PD +    ++ K  + G +D+A E+  E
Sbjct: 223 VAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRE 282

Query: 246 MMG 248
           ++ 
Sbjct: 283 LVA 285



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 2/217 (0%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD-SRIEVTVVTFCVLIDGLCKSG 94
           M   G+  N    + ++    + G  ++AL   D  L+ +  +  VV++  LI+GLCK G
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 95  LVREAIDYFGRM-PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
            V  A D F +M    G  PN   Y AL+DGLCK++ ++ AR +  E  KRD  PD   Y
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             L+    +     EAL    +MTE G    L ++ +++ GL R   L +A  +F+EMI 
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           R   P+ +    ++    +   +DEA +L + M+  G
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 217



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 38/253 (15%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + ++   D+  Y T++  L    + +++    ++M E G     V    ++    +A   
Sbjct: 109 RKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRL 168

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF------ 109
           ++AL + +EM+D      +VT+ V+IDGLCKS  + EA     RM      PD       
Sbjct: 169 ADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPL 228

Query: 110 -----------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
                                  G  P+V  YT +ID LCK   ++ A  +F E+     
Sbjct: 229 VLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC 288

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P+   Y+ALI GY +     E   +   M E+    ++  Y +++WGLS     +EA  
Sbjct: 289 SPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYG 345

Query: 207 LFHEMIGRGILPD 219
           +F EM   G +PD
Sbjct: 346 MFREMSECGFVPD 358



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 3/200 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++   +L  Y  +I GLC   + ++++ LL  M   G   + V  T L+  +  AG 
Sbjct: 178 MIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGR 237

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL LL  M+       VVT+ V+ID LCK G V +A + F  +      PNV  Y+A
Sbjct: 238 LDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSA 297

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+ + ++    +  EM  R   P+   Y  +I G    +  +EA  +   M+E G
Sbjct: 298 LIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECG 354

Query: 181 VDLDLNAYTSLVWGLSRCGH 200
              D   Y  L   L    H
Sbjct: 355 FVPDARTYRGLKRALRMIDH 374


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 35/284 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K  + K ++  Y  +I G C E K   +++LL  M E GL  NT   TTL+  + K G 
Sbjct: 317 IKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGS 376

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA--------------------- 99
            + A  L+++M     +  + T+  LIDGLCK G ++EA                     
Sbjct: 377 FNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTV 436

Query: 100 --------------IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                         +D F RM + G HP++  YT LI   C++  +E ++ LFD+    +
Sbjct: 437 MITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIE 496

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P    YT++I GY K      AL +  RM + G   D   Y +L+ GL +   L+EAR
Sbjct: 497 LVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEAR 556

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+  M+ + ++P E+  ++L  ++  R     A+ + + +  R
Sbjct: 557 ALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKR 600



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G+    D      I+   C + +F D   L   M E G   N V  T  +D   K   
Sbjct: 211 MQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAY 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             +A  +L+EM+   ++  V T   LI+GLCK G    A   F ++       PNV  YT
Sbjct: 271 VKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYT 330

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I G CK+  + RA  L   M ++ + P+T  YT LI G+ K  SF  A  L N+M   
Sbjct: 331 VMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRRE 390

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   ++  Y +L+ GL + G +QEA  +      +G+  D++    ++ +H ++G++  A
Sbjct: 391 GFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYA 450

Query: 240 IELQNEMMGRG 250
           ++L N M   G
Sbjct: 451 LDLFNRMAENG 461



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 121/256 (47%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M  K +K ++  + ++I GLC     E + +L L  +K +    N    T ++  Y K G
Sbjct: 281 MVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEG 340

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           + + A  LL  M++  +     T+  LI G CK G    A +   +M   G  PN+  Y 
Sbjct: 341 KLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYN 400

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ALIDGLCKK  I+ A  +      + +  D   YT +I  + K      AL+L NRM E 
Sbjct: 401 ALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAEN 460

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D++ YT+L+    +   ++E++ LF + +   ++P +    S++  + + G    A
Sbjct: 461 GCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSA 520

Query: 240 IELQNEMMGRGLLSGS 255
           + +   M+  G  + S
Sbjct: 521 LRVFERMVQNGCQADS 536



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 3/243 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++ D   Y  +I   C +     +  L + M ENG   +    TTL+  Y +  +  E
Sbjct: 425 QGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEE 484

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           +  L D+ L   +  T  T+  +I G CK G    A+  F RM   G   +   Y ALI 
Sbjct: 485 SQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALIS 544

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK++ +E AR L++ M  + ++P       L   Y + E    A+++ +R+ +   + 
Sbjct: 545 GLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKRRKNH 604

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +N    LV  LS  GH+++A +   + +   +  D +   S +   Y       A E+ 
Sbjct: 605 TVNV---LVRKLSAIGHVEDASLFLKKALDVDLAVDRLAYTSFINSCYANKKYALATEIS 661

Query: 244 NEM 246
            ++
Sbjct: 662 EKI 664



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 1/193 (0%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-GRMPDF 109
           ++ A+ +AG   EA  ++ EM    +   V T   ++     +G    A   F G +   
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           GL P+   + ALI G C+   +E    L   M  +    D    T ++  + +   F++ 
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L  RM E+G   ++  YT+ + GL +  ++++A  +  EM+ +G+ P+     SL+  
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLING 299

Query: 230 HYERGNMDEAIEL 242
             + G  + A  L
Sbjct: 300 LCKIGWTERAFRL 312



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 1/167 (0%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           ++    ++G + EA D    M   GL   V     ++           AR +FD M  R 
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179

Query: 146 -MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            ++PD  ++ ALI G  +    +E   L   M   G  LD    T +V    + G  ++ 
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             LF  M+  G  P+ +   + +    +R  + +A  +  EM+ +GL
Sbjct: 240 SELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGL 286


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 129/262 (49%), Gaps = 13/262 (4%)

Query: 2   KGKNIKADLPLYG---------TIIWGLCI---ESKFEDSKLLLSEMKENGLTANTVICT 49
           K +++  D+ +YG         T+I G C      K   +  +L EM EN ++ N     
Sbjct: 241 KARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFN 300

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
            L+D ++K      +L +  EMLD  +   V+T+  LI+GLC  G + EAI    +M   
Sbjct: 301 ILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSA 360

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ PN+  Y +LI+G CK   ++ A ++FD +  +   P T  Y  LID Y K     + 
Sbjct: 361 GVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDG 420

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             LK  M   G+  D+  Y  L+ GL R G+++ A+ LF ++  +G LPD +    L++ 
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG-LPDLVTFHILMEG 479

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
           +  RG   +A  L  EM   GL
Sbjct: 480 YCSRGESRKAAMLLKEMSKMGL 501



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 3/214 (1%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   + + C  LM A  K    ++   L  EM+  +I+  V TF V+I+ LCK+G + +A
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCK---KNCIERARNLFDEMPKRDMIPDTTAYTAL 156
            D    M  +G  PNV  Y  LIDG CK      + +A  +  EM + ++ P+ T +  L
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNIL 302

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           IDG+ K ++   +L +   M +  V  ++  Y SL+ GL   G + EA  +  +M+  G+
Sbjct: 303 IDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGV 362

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            P+ I   SL+    + G M EA+++ + + G+G
Sbjct: 363 QPNLITYHSLINGFCKNGMMKEALDMFDSVKGQG 396



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 122/241 (50%), Gaps = 1/241 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  +L  +  +I G   +     S  +  EM +  +  N +   +L++     G+ +EA+
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAI 351

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + D+M+ + ++  ++T+  LI+G CK+G+++EA+D F  +   G  P   +Y  LID  
Sbjct: 352 GMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAY 411

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   I+    L +EM +  ++PD   Y  LI G  ++ + + A  L +++T  G+  DL
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGLP-DL 470

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +  L+ G    G  ++A +L  EM   G+ P  +    ++K + + GN+  A  ++ +
Sbjct: 471 VTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQ 530

Query: 246 M 246
           M
Sbjct: 531 M 531



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 120/240 (50%), Gaps = 3/240 (1%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  L  +++  D + L  EM    +  N      +++A  K G+ ++A  ++++M    
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 76  IEVTVVTFCVLIDGLCK---SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               VV++  LIDG CK   +G + +A      M +  + PN+  +  LIDG  K + + 
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            +  +F EM  +D+IP+   Y +LI+G        EA+ ++++M   GV  +L  Y SL+
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  + G ++EA  +F  + G+G  P   +   L+  + + G +D+   L+ EM   G++
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 18/220 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KG+  +    +Y  +I   C   K +D   L  EM+  G+  +      L+    + G 
Sbjct: 392 VKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L D++ +  +   +VTF +L++G C  G  R+A      M   GL P    Y  
Sbjct: 452 IEAAKKLFDQLTNKGLP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNI 510

Query: 121 LIDGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++ G CK+  ++ A N+  +M K R +  +  +Y  L+ GY +    ++A  L N M E 
Sbjct: 511 MMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           G+  +   Y                 ++  EM+ +G +PD
Sbjct: 571 GLVPNRITY----------------EIVKEEMVDKGFVPD 594


>gi|341605687|gb|AEK82946.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M       D   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +BEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G   +V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRM 183



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  +   
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 130/248 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ ++  Y  ++ GLC  S++ D+  LLS+M +  +T N +  + L+DA+ K G+  E
Sbjct: 322 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 381

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L +EM+   I+  +VT+  LI+GLC    + EA   F  M   G   +V  Y  LI+
Sbjct: 382 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 441

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +E    LF EM +R ++ +T  Y  LI G+ +     +A    ++M   G+  
Sbjct: 442 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 501

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y  L+ GL   G L++A V+F +M  R +  D +   ++++   + G ++EA  L 
Sbjct: 502 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 561

Query: 244 NEMMGRGL 251
             +  +GL
Sbjct: 562 CSLSLKGL 569



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 134/250 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ DL  +  +I   C   +   +  +L +M + G   + V   +L++ + +    S+A+
Sbjct: 219 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 278

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL+D+M++   +  +V +  +ID LCK+  V +A D+F  +   G+ PNV  YTAL++GL
Sbjct: 279 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 338

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  +    A  L  +M K+ + P+   Y+AL+D ++K+    EA  L   M  + +D D+
Sbjct: 339 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 398

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+SL+ GL     + EA  +F  M+ +G L D +   +L+    +   +++ ++L  E
Sbjct: 399 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 458

Query: 246 MMGRGLLSGS 255
           M  RGL+S +
Sbjct: 459 MSQRGLVSNT 468



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 125/243 (51%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            + T+I GL + +K  ++  L+  M   G   + V    +++   K G+   A +LL++M 
Sbjct: 803  FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 862

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++E  V+ +  +IDGLCK   + +A++ F  M   G+ PNV  Y++LI  LC      
Sbjct: 863  QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 922

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             A  L  +M +R + PD   ++ALID ++K     EA  L + M +  +D  +  Y+SL+
Sbjct: 923  DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 982

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             G      L EA+ +F  M+ +   PD +   +L+K   +   ++E +E+  EM  RGL+
Sbjct: 983  NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 1042

Query: 253  SGS 255
              +
Sbjct: 1043 GNT 1045



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 119/229 (51%)

Query: 12   LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            +Y TII GLC     +D+  L  EM+  G+  N V  ++L+      G  S+A  LL +M
Sbjct: 872  IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 931

Query: 72   LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            ++ +I   V TF  LID   K G + EA   +  M    + P++  Y++LI+G C  + +
Sbjct: 932  IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991

Query: 132  ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            + A+ +F+ M  +   PD   Y  LI G+ K++  +E + +   M++ G+  +   Y  L
Sbjct: 992  DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051

Query: 192  VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + GL + G    A+ +F EM+  G+ P+ +   +LL    + G +++A+
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 1100



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 123/243 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D+  Y  II  LC   +  D+     E++  G+  N V  T L++    +   S+A  
Sbjct: 290 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 349

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M+  +I   V+T+  L+D   K+G V EA + F  M    + P++  Y++LI+GLC
Sbjct: 350 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 409

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
             + I+ A  +FD M  +  + D  +Y  LI+G+ K +  ++ + L   M++ G+  +  
Sbjct: 410 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 469

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +L+ G  + G + +A+  F +M   GI PD      LL    + G +++A+ +  +M
Sbjct: 470 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 529

Query: 247 MGR 249
             R
Sbjct: 530 QKR 532



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 125/251 (49%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K  + DL  YG ++ GLC     + +  LL++M++  L    +I  T++D   K   
Sbjct: 826  MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 885

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              +AL+L  EM    I   VVT+  LI  LC  G   +A      M +  ++P+V  ++A
Sbjct: 886  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 945

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LID   K+  +  A  L+DEM KR + P    Y++LI+G+  H+   EA  +   M    
Sbjct: 946  LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 1005

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               D+  Y +L+ G  +   ++E   +F EM  RG++ + +    L++  ++ G+ D A 
Sbjct: 1006 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 1065

Query: 241  ELQNEMMGRGL 251
            E+  EM+  G+
Sbjct: 1066 EIFKEMVSDGV 1076



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 119/233 (51%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G+++ G C  ++  D+  L+ +M E G   + V    ++D+  K    ++A     E+  
Sbjct: 262 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 321

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             I   VVT+  L++GLC S    +A      M    + PNV  Y+AL+D   K   +  
Sbjct: 322 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 381

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A+ LF+EM +  + PD   Y++LI+G   H+   EA  + + M   G   D+ +Y +L+ 
Sbjct: 382 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 441

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           G  +   +++   LF EM  RG++ + +   +L++  ++ G++D+A E  ++M
Sbjct: 442 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 120/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C  S+   +  +L +M + G   N V  ++L++ Y  +   SEA++L+D+M 
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  +   VTF  LI GL       EA+    RM   G  P++  Y  +++GLCK+   +
Sbjct: 793 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NL ++M +  + P    Y  +IDG  K++   +ALNL   M   G+  ++  Y+SL+
Sbjct: 853 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L   G   +A  L  +MI R I PD     +L+    + G + EA +L +EM+ R +
Sbjct: 913 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 114/216 (52%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +I  D+  Y ++I GLC+  + +++  +   M   G  A+ V   TL++ + KA    + 
Sbjct: 393 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 452

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + L  EM    +    VT+  LI G  ++G V +A ++F +M  FG+ P++  Y  L+ G
Sbjct: 453 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 512

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC    +E+A  +F++M KR+M  D   YT +I G  K    +EA +L   ++  G+  D
Sbjct: 513 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 572

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  YT+++ GL   G L E   L+ +M   G++ ++
Sbjct: 573 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 608



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 106/209 (50%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+ K I+ ++  Y ++I  LC   ++ D+  LLS+M E  +  +    + L+DA+ K G+
Sbjct: 896  METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA  L DEM+   I+ ++VT+  LI+G C    + EA   F  M      P+V  Y  
Sbjct: 956  LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 1015

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LI G CK   +E    +F EM +R ++ +T  Y  LI G  +      A  +   M   G
Sbjct: 1016 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
            V  ++  Y +L+ GL + G L++A V+F 
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKAMVVFE 1104



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 119/251 (47%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  ++I   +  Y ++I G C+  + +++K +   M       + V   TL+  + K   
Sbjct: 966  MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              E + +  EM    +    VT+ +LI GL ++G    A + F  M   G+ PN+  Y  
Sbjct: 1026 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 1085

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L+DGLCK   +E+A  +F+ + +  M P    Y  +I+G  K    ++  +L   ++  G
Sbjct: 1086 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 1145

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            V  D+ AY +++ G  R G  +EA  LF EM   G LP+     +L++     G+ + + 
Sbjct: 1146 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 1205

Query: 241  ELQNEMMGRGL 251
            EL  EM   G 
Sbjct: 1206 ELIKEMRSCGF 1216



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 1/240 (0%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K+   D+  Y T+I G C   + E+   +  EM + GL  NTV    L+   F+AG+
Sbjct: 1001 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 1060

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               A  +  EM+   +   ++T+  L+DGLCK+G + +A+  F  +    + P +  Y  
Sbjct: 1061 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 1120

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +I+G+CK   +E   +LF  +  + + PD  AY  +I G+ +  S +EA  L   M E G
Sbjct: 1121 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 1180

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +   Y +L+    R G  + +  L  EM   G   D    I L+      G +D++ 
Sbjct: 1181 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS-TIGLVTNMLHDGRLDKSF 1239



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 8/208 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K   AD+  Y T+I G C   + ED   L  EM + GL +NTV   TL+  +F+AG+
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A     +M    I   + T+ +L+ GLC +G + +A+  F  M    +  ++  YT 
Sbjct: 484 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 543

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G+CK   +E A +LF  +  + + PD   YT ++ G        E   L  +M + G
Sbjct: 544 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603

Query: 181 V--------DLDLNAYTSLVWGLSRCGH 200
           +        D D+     L+  +  CG+
Sbjct: 604 LMKNDCTLSDGDITLSAELIKKMLSCGY 631



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 112/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  +   +KF+    L  +M+  G+  N    + L++ + +  +   AL++L +M+
Sbjct: 698 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 757

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E  +VT   L++G C S  + EA+    +M   G  PN   +  LI GL   N   
Sbjct: 758 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 817

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L D M  +   PD   Y  +++G  K      A NL N+M +  ++  +  Y +++
Sbjct: 818 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 877

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +  H+ +A  LF EM  +GI P+ +   SL+      G   +A  L ++M+ R +
Sbjct: 878 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 936



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 105/223 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  D+  L S+M ++    + V    L+ A  K  +    +SL  +M    I   + TF 
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           ++I+  C    V  A+   G+M   G  P+     +L++G C++N +  A +L D+M + 
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PD  AY A+ID   K +   +A +    +   G+  ++  YT+LV GL       +A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L  +MI + I P+ I   +LL    + G + EA EL  EM+
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 390



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 107/229 (46%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E K +D+  L  EM ++    + +  + L+ A  K  +    +SL ++M +  I     T
Sbjct: 673 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 732

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           + +LI+  C+   +  A+   G+M   G  PN+   ++L++G C    I  A  L D+M 
Sbjct: 733 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
                P+T  +  LI G   H    EA+ L +RM   G   DL  Y  +V GL + G   
Sbjct: 793 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            A  L ++M    + P  ++  +++    +  +MD+A+ L  EM  +G+
Sbjct: 853 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 901


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+ +Y TII G+C E + E ++ +L+ M   GL+ N V   TL+     A  
Sbjct: 278 MAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADR 337

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM D    +  VTF +L+D LC++GLV   I+   +M + G  P+V  YT 
Sbjct: 338 WEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTT 397

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK+  I+ A  L   M      P+T +YT ++ G    E + +A  L ++M + G
Sbjct: 398 VINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQG 457

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + +L+  L + G +++A  L  +M+  G  PD I   +++    + GN DEA+
Sbjct: 458 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEAL 517

Query: 241 ELQNEMMGRGL 251
           EL N M+ +G+
Sbjct: 518 ELLNVMVKKGM 528



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 121/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y T++ GLC   ++E+++ LL+EM +     + V    L+D   + G 
Sbjct: 313 MPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGL 372

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + +L++ML+      V+T+  +I+G CK GL+ EA+     M   G  PN   YT 
Sbjct: 373 VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTI 432

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC       A  L  +M ++   P+   +  LI+   K    ++A+ L  +M   G
Sbjct: 433 VLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL +Y++++ GL + G+  EA  L + M+ +G+ P+ I+  S+       G +++ I
Sbjct: 493 CSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVI 552

Query: 241 EL 242
           ++
Sbjct: 553 QM 554



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 112/244 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NTV  T ++     A    +A  L+
Sbjct: 391 DVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELM 450

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+        VTF  LI+ LCK GLV +AI+   +M   G  P++  Y+ +IDGL K 
Sbjct: 451 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 510

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + A  L + M K+ M P+T  Y+++           + + +   + +  V  D   Y
Sbjct: 511 GNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLY 570

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L + G    A      M+  G +P+E     L++     G + EA E+  E+  
Sbjct: 571 NAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCS 630

Query: 249 RGLL 252
           +G L
Sbjct: 631 KGAL 634



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 117/279 (41%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y  ++ GLC+  ++   + L+ EM   G   N V  +TL+    + G       
Sbjct: 214 EPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHE 273

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +  +M +      V  +  +IDG+CK   +  A     RMP +GL PNV  Y  L+ GLC
Sbjct: 274 VHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLC 333

Query: 127 KKNCIERARNLFDEMPKRD-----------------------------------MIPDTT 151
             +  E A  L  EM  +D                                    +PD  
Sbjct: 334 SADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVI 393

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT +I+G+ K     EA+ L   M   G   +  +YT ++ GL       +A  L  +M
Sbjct: 394 TYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQM 453

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I +G  P+ +   +L+    ++G +++AIEL  +M+  G
Sbjct: 454 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 109/253 (43%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +      P+Y   +   C  S F  +  +L ++   G   +   C  ++ A    G 
Sbjct: 137 MARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGP 196

Query: 61  PSEALSLLDEMLDS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             EA+ LL ++L S   E  VV++  ++ GLC +       D    M   G  PN+  ++
Sbjct: 197 VDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFS 256

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LI  LC+    ER   +  +M +    PD   Y  +IDG  K E  + A  + NRM   
Sbjct: 257 TLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSY 316

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  ++  Y +L+ GL      +EA  L  EM  +    D++    L+    + G +D  
Sbjct: 317 GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRV 376

Query: 240 IELQNEMMGRGLL 252
           IE+  +M+  G +
Sbjct: 377 IEVLEQMLEHGCM 389



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAG 59
           + G+    D+     ++  +C +   +++  LL ++  + G   + V    ++     A 
Sbjct: 172 LHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMAR 231

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
                  L++EM+ +     +VTF  LI  LC++GL     +   +M + G  P+V +Y 
Sbjct: 232 RWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYA 291

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +IDG+CK+  +E AR + + MP   + P+   Y  L+ G    + ++EA  L   M + 
Sbjct: 292 TIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDK 351

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
              LD   +  LV  L + G +     +  +M+  G +PD I   +++    + G +DEA
Sbjct: 352 DCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA 411

Query: 240 IELQNEMMGRG 250
           + L   M   G
Sbjct: 412 VMLLRSMAACG 422



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 79/205 (38%), Gaps = 47/205 (22%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           ++ G C++G +  A      +P   + PN   Y  L+  LC +  I  A  + D+M +R 
Sbjct: 85  MVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMARRG 141

Query: 146 MIPDTTAYTALIDGYLKHESFKEALN---------------------------------- 171
             P    Y   ++   +   F+ A+                                   
Sbjct: 142 CAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAV 201

Query: 172 --LKNRMTEVGVDLDLNAYTSLVWGLS---RCGHLQEARVLFHEMIGRGILPDEILCISL 226
             L++ +   G + D+ +Y +++ GL    R GH+Q+   L  EM+  G  P+ I+  S 
Sbjct: 202 RLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQD---LMEEMVAAGCPPN-IVTFST 257

Query: 227 LKKHYERGNMDEAI-ELQNEMMGRG 250
           L  H  R  + E + E+  +M   G
Sbjct: 258 LIGHLCRNGLFERVHEVHAQMAEHG 282



 Score = 37.0 bits (84), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 44/99 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  +  +Y +I   L  E +      +   +++  + ++ V+   ++ +  K GE
Sbjct: 523 MVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGE 582

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
              A+  L  M+ S       T+ +LI GL   G V+EA
Sbjct: 583 TDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA 621


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 132/254 (51%), Gaps = 3/254 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KNI  D+  +  +I  LC E K  ++K +   M + G+  N      +++   K     E
Sbjct: 214 KNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 271

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A++LL EML   +    VT+  LIDGLCKSG +  A++    M   G   +V  YT+L+D
Sbjct: 272 AMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLD 331

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK   +++A  LF +M +R + P    YTALIDG  K    K A  L   +   G  +
Sbjct: 332 ALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI 391

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  YT ++ GL + G   EA  +  +M   G +P+ +    +++  +E+   D+A +L 
Sbjct: 392 DVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLL 451

Query: 244 NEMMGRGLLSGSKN 257
           +EM+ +GLL G +N
Sbjct: 452 HEMIAKGLL-GFRN 464



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 33/283 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ +L     +I   C   +   S  LL ++ + G   NT+  TTLM      GE
Sbjct: 36  MDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGE 95

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L   D+++    +   V++  L++GLCK+G  R AI     + D    PNV +Y+A
Sbjct: 96  VKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSA 155

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY-----------LKHESF--- 166
           +IDGLCK   +  A +L+ EM  R++ P+   Y  LI  +           L HE     
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKN 215

Query: 167 -------------------KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
                              K A  + + M ++GV+ ++ +Y  ++ GL +C  + EA  L
Sbjct: 216 INPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 275

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             EM+ + ++PD +   SL+    + G +  A+ L NEM  RG
Sbjct: 276 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 318



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 89/181 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  D   Y ++I GLC   +   +  L++EM   G  A+ V  T+L+DA  K   
Sbjct: 279 MLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQN 338

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L  +M +  I+ T+ T+  LIDGLCK G ++ A + F  +   G   +V  YT 
Sbjct: 339 LDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTV 398

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK+   + A  +  +M     IP+   +  +I    + +   +A  L + M   G
Sbjct: 399 MISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458

Query: 181 V 181
           +
Sbjct: 459 L 459



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 1/204 (0%)

Query: 17  IWGLCIESKFEDSKLLLS-EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I G  ++ K+  + + LS +M   G+  N V  + L++ +   G+ + + SLL ++L   
Sbjct: 16  ILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLG 75

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
                +T+  L+ GLC  G V++ + +  ++       N   Y  L++GLCK      A 
Sbjct: 76  YXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAI 135

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L   +  R   P+   Y+A+IDG  K +   EA +L + M    +  ++  Y +L+   
Sbjct: 136 KLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAF 195

Query: 196 SRCGHLQEARVLFHEMIGRGILPD 219
              G L  A  L HEMI + I PD
Sbjct: 196 CLAGQLMGAFSLLHEMILKNINPD 219



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 89/188 (47%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            +SL  +M    IE  +VT  +LI+  C  G +  +    G++   G  PN   +T L+ 
Sbjct: 29  VISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMK 88

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC K  +++  +  D++  +    +  +Y  L++G  K    + A+ L   + +     
Sbjct: 89  GLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRP 148

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y++++ GL +   + EA  L+ EM  R I P+ I   +L+      G +  A  L 
Sbjct: 149 NVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLL 208

Query: 244 NEMMGRGL 251
           +EM+ + +
Sbjct: 209 HEMILKNI 216


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 130/248 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ ++  Y  ++ GLC  S++ D+  LLS+M +  +T N +  + L+DA+ K G+  E
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L +EM+   I+  +VT+  LI+GLC    + EA   F  M   G   +V  Y  LI+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +E    LF EM +R ++ +T  Y  LI G+ +     +A    ++M   G+  
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y  L+ GL   G L++A V+F +M  R +  D +   ++++   + G ++EA  L 
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 244 NEMMGRGL 251
             +  +GL
Sbjct: 459 CSLSLKGL 466



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 134/250 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ DL  +  +I   C   +   +  +L +M + G   + V   +L++ + +    S+A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL+D+M++   +  +V +  +ID LCK+  V +A D+F  +   G+ PNV  YTAL++GL
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  +    A  L  +M K+ + P+   Y+AL+D ++K+    EA  L   M  + +D D+
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+SL+ GL     + EA  +F  M+ +G L D +   +L+    +   +++ ++L  E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 246 MMGRGLLSGS 255
           M  RGL+S +
Sbjct: 356 MSQRGLVSNT 365



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 123/243 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D+  Y  II  LC   +  D+     E++  G+  N V  T L++    +   S+A  
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M+  +I   V+T+  L+D   K+G V EA + F  M    + P++  Y++LI+GLC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
             + I+ A  +FD M  +  + D  +Y  LI+G+ K +  ++ + L   M++ G+  +  
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +L+ G  + G + +A+  F +M   GI PD      LL    + G +++A+ +  +M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426

Query: 247 MGR 249
             R
Sbjct: 427 QKR 429



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 119/233 (51%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G+++ G C  ++  D+  L+ +M E G   + V    ++D+  K    ++A     E+  
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             I   VVT+  L++GLC S    +A      M    + PNV  Y+AL+D   K   +  
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A+ LF+EM +  + PD   Y++LI+G   H+   EA  + + M   G   D+ +Y +L+ 
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           G  +   +++   LF EM  RG++ + +   +L++  ++ G++D+A E  ++M
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 114/216 (52%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +I  D+  Y ++I GLC+  + +++  +   M   G  A+ V   TL++ + KA    + 
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + L  EM    +    VT+  LI G  ++G V +A ++F +M  FG+ P++  Y  L+ G
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC    +E+A  +F++M KR+M  D   YT +I G  K    +EA +L   ++  G+  D
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  YT+++ GL   G L E   L+ +M   G++ ++
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 8/208 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K   AD+  Y T+I G C   + ED   L  EM + GL +NTV   TL+  +F+AG+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A     +M    I   + T+ +L+ GLC +G + +A+  F  M    +  ++  YT 
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G+CK   +E A +LF  +  + + PD   YT ++ G        E   L  +M + G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500

Query: 181 V--------DLDLNAYTSLVWGLSRCGH 200
           +        D D+     L+  +  CG+
Sbjct: 501 LMKNDCTLSDGDITLSAELIKKMLSCGY 528



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 105/223 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  D+  L S+M ++    + V    L+ A  K  +    +SL  +M    I   + TF 
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           ++I+  C    V  A+   G+M   G  P+     +L++G C++N +  A +L D+M + 
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PD  AY A+ID   K +   +A +    +   G+  ++  YT+LV GL       +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L  +MI + I P+ I   +LL    + G + EA EL  EM+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  130 bits (327), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 131/270 (48%), Gaps = 20/270 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK+I  D+ LY  +I       + +D+ LLL EMK+ G   +T    TL+ A F  G 
Sbjct: 345 MLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGN 404

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SL+ EML + + +   T  ++I GLCK GL+ +A+  F  M + G HP V  Y A
Sbjct: 405 IDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNA 464

Query: 121 LIDGLCKKNCIERARNLFDEM-----PK--------RDMIPDTTAYTALIDGYLKHESFK 167
           LIDGL +   +E AR LF +M     P          + + DT +   L+DG  +     
Sbjct: 465 LIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVL 524

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI----LC 223
           +A  L   + E GV  D+  Y +L+ GL +  +L  A  LF E+  +GI PDEI    L 
Sbjct: 525 KAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLI 584

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
             L + H E    D  +  QN +   G  S
Sbjct: 585 DGLWRAHREN---DATMLFQNILRSGGFPS 611



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 116/246 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+ +Y  ++  LC E + ED+  LL  MKENG   + V  T  +    KAG 
Sbjct: 240 MLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGR 299

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA    + + D    + ++ +  LIDGL ++G   E + Y+  M    + P++ +YT 
Sbjct: 300 VDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTI 359

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI    +    + A  L DEM  +  +PDT  Y  L+       +   A +L + M +  
Sbjct: 360 LIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNN 419

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V LD   +  ++ GL + G + +A  +F EM   G  P  +   +L+   Y  G ++EA 
Sbjct: 420 VVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEAR 479

Query: 241 ELQNEM 246
            L ++M
Sbjct: 480 MLFHKM 485



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 101/216 (46%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M  +G   N+     LMD   K G   +AL + DEML+  I   V  + VL+  LC
Sbjct: 201 LYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLC 260

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + +A      M + G  P+   YT  + GLCK   ++ A + F+ +          
Sbjct: 261 NEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLI 320

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ LIDG  +   F E L+    M    +  D+  YT L+   +  G  ++A +L  EM
Sbjct: 321 GYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEM 380

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             +G +PD     +LLK  ++ GN+D A  L +EM+
Sbjct: 381 KDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEML 416



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 94/189 (49%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL+L + M+ S       T+ VL+DGLCK G+  +A+  F  M + G+ P+V +YT L+ 
Sbjct: 198 ALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLS 257

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LC +  IE A  L   M +    PD   YT  + G  K     EA +    + + G  L
Sbjct: 258 SLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTL 317

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            L  Y+ L+ GL + G   E    + EM+G+ I PD  L   L+++  E G   +A  L 
Sbjct: 318 GLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLL 377

Query: 244 NEMMGRGLL 252
           +EM  +G +
Sbjct: 378 DEMKDKGFV 386



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 8/242 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC      D+  +  EM E G+  +  I T L+ +    G   +A  LL  M 
Sbjct: 217 YIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMK 276

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++      VT+ V + GLCK+G V EA   F  + D G    +  Y+ LIDGL +    +
Sbjct: 277 ENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFD 336

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
              + + EM  + + PD T YT LI  + +    K+A  L + M + G   D   Y +L+
Sbjct: 337 EGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLL 396

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDE----ILCISLLKKHYERGNMDEAIELQNEMMG 248
             L   G++  A+ L  EM+   ++ D     I+   L KK    G +D+A+++ +EM  
Sbjct: 397 KALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKK----GLIDKAMQVFDEMGE 452

Query: 249 RG 250
            G
Sbjct: 453 HG 454



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 95/219 (43%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           L++ +  GL A +     L+ A+  AG   EA+     M D     T   +  +   L  
Sbjct: 132 LADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVD 191

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
            G++  A+  + RM   G  PN   Y  L+DGLCK+     A  +FDEM +R ++PD   
Sbjct: 192 RGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKI 251

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           YT L+         ++A  L   M E G   D   YT  + GL + G + EA   F  + 
Sbjct: 252 YTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQ 311

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             G     I    L+   ++ G  DE +    EM+G+ +
Sbjct: 312 DGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSI 350



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 14/255 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  D   +  +I GLC +   + +  +  EM E+G     +    L+D  ++AG 
Sbjct: 415 MLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGM 474

Query: 61  PSEALSLLDEM-------------LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
             EA  L  +M             L +       +   L+DG+C+SG V +A      + 
Sbjct: 475 LEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGII 534

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           + G+ P+V  Y  LI+GLCK   ++ A  LF E+  + + PD   Y  LIDG  +     
Sbjct: 535 ESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHREN 594

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI-LPDEILCISL 226
           +A  L   +   G    L  Y +++  L R   L +A  L+ + + +   L  E   I+ 
Sbjct: 595 DATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIAN 654

Query: 227 LKKHYERGNMDEAIE 241
            +K +E G +DE ++
Sbjct: 655 ARKCFEDGFLDETVK 669



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 11/246 (4%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G N   D      ++ G+C   +   +  LL  + E+G+  + V   TL++   KA    
Sbjct: 500 GANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLD 559

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            AL L  E+    I    +T+  LIDGL ++    +A   F  +   G  P++ +Y  ++
Sbjct: 560 GALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMM 619

Query: 123 DGLCKKNCIERARNLF-DEMPKR-DMIPD----TTAYTALIDGYLKHESFKEALNLKNRM 176
             LC+   + +A NL+ D +PK+ ++ P+      A     DG+L  E+ KE +    ++
Sbjct: 620 RSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANARKCFEDGFLD-ETVKELI----KI 674

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            +V   L+ N YT  V GL +   + +A  +FH +   GI+     C  L+       N+
Sbjct: 675 DQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNL 734

Query: 237 DEAIEL 242
           + A+++
Sbjct: 735 NAAVDI 740


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 127/274 (46%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG II GLC   + + +K LL EM   GL  N V+ +TL+D + + G   EA  ++ EM 
Sbjct: 316 YGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMS 375

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLV-----------------------------------R 97
            + ++   +T+  LI GLCK G +                                    
Sbjct: 376 AAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKE 435

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           EA      M   G+ PNV  Y+ +I+GLC+    ERA  L ++M    + P+   Y  LI
Sbjct: 436 EAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLI 495

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            GY +  SF  A     +MT   +  DL  Y SL+ GLS  G + EA   + EM+ +G  
Sbjct: 496 SGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQ 555

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P++     L+  +   GN+++A +L ++M+  GL
Sbjct: 556 PNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGL 589



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 119/216 (55%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M+  G++ +    +TL++AY K  +   A  +++EM ++   + VVT+  LI GLC++G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + EA  Y   M D+GL P+   Y A+I+GLCK+   ++A+ L DEM    ++P+   Y+ 
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LIDG+++  +  EA  +   M+  GV  +   Y +L+ GL + G +  A  +  +M   G
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + D +    +++ H  + N +EA  L NEM   G+
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGI 449



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 122/238 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I G  +    E ++ LL +M  +GL  N  I   +++ YFK+    +  S L  ML
Sbjct: 561 YGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSML 620

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +      + ++I  L  SG ++ A+     +   GL P+  +Y +LI G CK   +E
Sbjct: 621 EKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADME 680

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L DEM K+ + P  + Y ALIDG+ K +    A N+ N +   G+  +   YT+L+
Sbjct: 681 KAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLI 740

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  + G +++A  L++EM+  G+ PD  +   L       G++ +A+ +  EM+ RG
Sbjct: 741 DGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG 798



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 124/246 (50%), Gaps = 5/246 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  D  LYG +I  L      + +  +LS +++NGL  +++I  +L+  + KA +  +
Sbjct: 622 KGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEK 681

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ LLDEM    IE  +  +  LIDG CKS  +  A + F  +   GL PN   YT LID
Sbjct: 682 AVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLID 741

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   I  A +L++EM    + PD   Y+ L  G       ++AL +   M   G  +
Sbjct: 742 GYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI 801

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA---- 239
            ++++ +LV G  + G LQE     H M+ + I+P  +   +++    E G + EA    
Sbjct: 802 -ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIF 860

Query: 240 IELQNE 245
           +ELQ +
Sbjct: 861 VELQQK 866



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 113/234 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC     E++     EM++ GL  +      +++   K G P +A  LLDEM 
Sbjct: 281 YNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMS 340

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + +   VV +  LIDG  + G   EA      M   G+ PN   Y  LI GLCK   + 
Sbjct: 341 CAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMG 400

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  +  +M K   + DT  Y  +I+G+L+  + +EA  L N M + G+  ++  Y+ ++
Sbjct: 401 RASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIII 460

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL + G  + A  L  +MI  G+ P+  +   L+  +   G+   A E   +M
Sbjct: 461 NGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKM 514



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 123/256 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ +   Y  +I GLC   +   +  +L +M + G  A+T+    +++ + +   
Sbjct: 374 MSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHN 433

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+EM    I   V T+ ++I+GLC+ G    A     +M   GL PN  VY  
Sbjct: 434 KEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAP 493

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C++     A     +M + ++ PD   Y +LI G        EA+   + M E G
Sbjct: 494 LISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKG 553

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y  L+ G S  G+L++A  L H+M+  G+ P++ +   +L+ +++  N+++  
Sbjct: 554 FQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVS 613

Query: 241 ELQNEMMGRGLLSGSK 256
                M+ +GL+  ++
Sbjct: 614 STLKSMLEKGLMPDNR 629



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 121/254 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  ++  Y  II GLC   + E +  LL +M  +GL  N  +   L+  Y + G 
Sbjct: 444 MRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGS 503

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A   L +M    +   +  +  LI GL   G + EAI+Y+  M + G  PN   Y  
Sbjct: 504 FSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGG 563

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G      +E+A  L  +M    + P+   Y  +++GY K ++ ++  +    M E G
Sbjct: 564 LIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKG 623

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  ++  LS  GH+Q A  +   +   G++PD ++  SL+    +  +M++A+
Sbjct: 624 LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAV 683

Query: 241 ELQNEMMGRGLLSG 254
            L +EM  +G+  G
Sbjct: 684 GLLDEMAKKGIEPG 697



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  DL  Y ++I GL    K +++     EM E G   N      L+  Y  AG 
Sbjct: 514 MTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGN 573

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL +ML+S +      +  +++G  KS  + +       M + GL P+  +Y  
Sbjct: 574 LEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGI 633

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L     ++ A ++   + K  ++PD+  Y +LI G+ K    ++A+ L + M + G
Sbjct: 634 VIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKG 693

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++  ++ Y +L+ G  +   +  AR +F+ +I +G+ P+ +   +L+  + + G++ +AI
Sbjct: 694 IEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAI 753

Query: 241 ELQNEMMGRGL 251
           +L NEM+  G+
Sbjct: 754 DLYNEMLTEGV 764



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 97/218 (44%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           MK+ GL  +   C  L+    +A        +   M  + I   V T+  LI+  CK   
Sbjct: 199 MKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRD 258

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           +  A      M + G   NV  Y  LI GLC+   IE A     EM    ++PD   Y A
Sbjct: 259 LESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGA 318

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +I+G  K     +A  L + M+  G+  ++  Y++L+ G  R G+  EA  +  EM   G
Sbjct: 319 IINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           + P++I   +L++   + G M  A  +  +M   G ++
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMA 416



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           V   VL+D   K+G VR+  +    M D GL P++     L+  L + + ++    +   
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M    + PD   Y+ LI+ Y K    + A  +   M E G  L++  Y +L+ GL R G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           ++EA     EM   G++PD     +++    +RG  D+A  L +EM   GL+
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLM 345


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 126/246 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  +G +I G C     + S  LL  +++ GL+ N VI TTL+D   K G+   A 
Sbjct: 158 VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERAR 217

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              D+M +  +     TF VLI+GL K GL ++  D F +M   GL PN+  Y  L++  
Sbjct: 218 LFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEY 277

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C +  I RA +LFDEM +R +  +   Y  LI G  + E   EA  L ++M +  V  +L
Sbjct: 278 CGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNL 337

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ G    G+L +A  L  ++   G+ P  +    L++ + + GN     +L  E
Sbjct: 338 ITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLARE 397

Query: 246 MMGRGL 251
           M GRG+
Sbjct: 398 MEGRGI 403



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 106/219 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  +L  Y T+I G C     + +  LL ++K NGL+ + V    L++ Y KAG 
Sbjct: 328 MKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGN 387

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 L  EM    I  + VT  VLID   +   + +A   +  M  FGL P+V VY  
Sbjct: 388 WKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGV 447

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC K  ++ +  LF  M +  + P    Y  +I GY K ++   AL L   M   G
Sbjct: 448 LIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKG 507

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  ++ +Y+S++  L + G  +EA VL  +MI   + P 
Sbjct: 508 LVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPS 546



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  +L  Y  ++   C E K   +  L  EM+E G+ AN V   TL+    +   
Sbjct: 258 MKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREER 317

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+D+M  + +   ++T+  LI G C  G + +A     ++   GL P++  Y  
Sbjct: 318 VWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNI 377

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G  K    +   +L  EM  R + P     T LID Y++ +  ++A  + + M + G
Sbjct: 378 LIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFG 437

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  L+ GL   G+++E+  LF  M    + P +++  +++  + +  N   A+
Sbjct: 438 LVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRAL 497

Query: 241 ELQNEMMGRGLL 252
            L  EM  +GL+
Sbjct: 498 RLLREMEAKGLV 509



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 127/275 (46%), Gaps = 36/275 (13%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           LY +II         + + +  +EM + GL     I  +L+ +  ++    +A    +E 
Sbjct: 95  LYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNE- 153

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L  R++  V +F ++I G C++G + ++    G + D GL PNV +YT LIDG CK   I
Sbjct: 154 LKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDI 213

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGY----LKHESFK-------------------- 167
           ERAR  FD+M +  ++ +   +T LI+G     LK + F                     
Sbjct: 214 ERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCL 273

Query: 168 -----------EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
                       A +L + M E GV+ ++  Y +L+ G+ R   + EA  L  +M    +
Sbjct: 274 MNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAV 333

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            P+ I   +L+    + GN+D+A  L +++   GL
Sbjct: 334 SPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGL 368



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 110/239 (46%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A+   +  +I GL  +   +D   L  +MK NGL  N      LM+ Y   G+   A  L
Sbjct: 230 ANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDL 289

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            DEM +  +E  VVT+  LI G+C+   V EA     +M    + PN+  Y  LI G C 
Sbjct: 290 FDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCD 349

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +++A +L D++    + P    Y  LI+GY K  ++K   +L   M   G+      
Sbjct: 350 VGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVT 409

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            T L+    R   +++A  ++  M   G++PD  +   L+     +GNM E+ +L   M
Sbjct: 410 CTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSM 468



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 90/175 (51%), Gaps = 1/175 (0%)

Query: 78  VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNL 137
            T + +  +I+   KS L+ +A+ +F  M D GL     ++ +L+  L + NC E+A   
Sbjct: 91  TTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLF 150

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSR 197
           F+E+ +R    D  ++  +I G  ++ +  ++  L   + ++G+  ++  YT+L+ G  +
Sbjct: 151 FNELKERVKF-DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCK 209

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G ++ AR+ F +M   G++ ++     L+   +++G   +  +L  +M   GL 
Sbjct: 210 NGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLF 264



 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 73/186 (39%), Gaps = 35/186 (18%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K   +   L  Y  +I G      ++    L  EM+  G++ + V CT L+DAY +  E
Sbjct: 363 LKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQE 422

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF----------- 109
             +A  +   M    +   V  + VLI GLC  G ++E+   F  M +            
Sbjct: 423 MEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNT 482

Query: 110 ------------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                   GL PNVA Y+++I  LCK    E A  L D+M +  
Sbjct: 483 MIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQ 542

Query: 146 MIPDTT 151
           + P  +
Sbjct: 543 LKPSAS 548



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 10/129 (7%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +YG +I GLC++   ++S  L   M E  +  + VI  T++  Y K      AL LL
Sbjct: 441 DVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLL 500

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM    +   V ++  +I  LCK G   EA     +M +  L P+ ++           
Sbjct: 501 REMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASIL---------- 550

Query: 129 NCIERARNL 137
           N I +A+N 
Sbjct: 551 NMISKAKNF 559


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 122/246 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y TII GLC   + + ++ +  +M E G+  N V   T++D   KA E   A 
Sbjct: 221 VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAE 280

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M+D  ++ + VT+  +IDGLCK+  V  A   F +M D G+ P+   Y  +IDGL
Sbjct: 281 GVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGL 340

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   I++A  +F +M  + + PD   YT +IDG  K +S   A  +  +M + GV  + 
Sbjct: 341 CKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNN 400

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ G    G  +E      EM    + PD      LL    + G  +EA  L + 
Sbjct: 401 GTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDS 460

Query: 246 MMGRGL 251
           M+ +G+
Sbjct: 461 MIRKGI 466



 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 130/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K +   Y TII GLC   + + ++ +  +M + G+  + V   T++D   KA  
Sbjct: 251 MVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQA 310

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+D  ++   VT+  +IDGLCK+  + +A   F +M D G+ P+   YT 
Sbjct: 311 VDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTI 370

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   ++RA  +F +M  + + P+   Y  LI GYL    ++E +     M+   
Sbjct: 371 IIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHD 430

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  Y  L+  L + G   EAR LF  MI +GI P   +   +L  + ++G + E  
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 241 ELQNEMMGRGL 251
           +L N M+  G+
Sbjct: 491 DLLNLMVANGI 501



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 121/243 (49%), Gaps = 3/243 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I G   E + + +  L  EM   G++ + V   T++D   KA E   A  + 
Sbjct: 192 DVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVF 248

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M++  ++   VT+  +IDGLCK+  V  A   F +M D G+ P+   Y  +IDGLCK 
Sbjct: 249 QQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKA 308

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++RA  +F +M  R + PD   Y  +IDG  K ++  +A  +  +M + GV  D   Y
Sbjct: 309 QAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTY 368

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T ++ GL +   +  A  +F +MI +G+ P+      L+  +   G  +E ++   EM  
Sbjct: 369 TIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSA 428

Query: 249 RGL 251
             L
Sbjct: 429 HDL 431



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 127/242 (52%), Gaps = 6/242 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEM---KENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           Y T++ GLC   + E+++ LL  M   +++  + + V    +++ +F  G+  +A SL  
Sbjct: 158 YNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFL 217

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM    +   VVT+  +IDGLCK+  V  A D F +M + G+ PN   Y  +IDGLCK  
Sbjct: 218 EM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQ 274

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++ A  +F +M  + + P    Y  +IDG  K ++   A  +  +M + GV  D   Y 
Sbjct: 275 EVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYN 334

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +++ GL +   + +A  +F +MI +G+ PD +    ++    +  ++D A  +  +M+ +
Sbjct: 335 TIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDK 394

Query: 250 GL 251
           G+
Sbjct: 395 GV 396



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 125/254 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK  + +YG ++ G   +    +   LL+ M  NG++ N  I  T++ AY K   
Sbjct: 461 MIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAM 520

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + +  +M    +   VVT+  LID LCK G V +A+  F +M + G+ PN  V+ +
Sbjct: 521 IDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNS 580

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC  +  E+   LF EM  + + PD   +  ++    K     EA  L + M  +G
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ +Y +L+ G      + EA  L   M+  G+ P+ +   +LL  + + G +D A 
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700

Query: 241 ELQNEMMGRGLLSG 254
            L  EM+ +G+  G
Sbjct: 701 CLFREMLRKGVTPG 714



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K     Y TII GLC     + ++ +  +M + G+  + V   T++D   KA  
Sbjct: 286 MVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQA 345

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +  +M+D  ++   +T+ ++IDGLCK+  V  A   F +M D G+ PN   Y  
Sbjct: 346 IDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNC 405

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G       E       EM   D+ PD   Y  L+D   K+    EA +L + M   G
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  ++ G  + G L E   L + M+  GI P+  +  +++  + +R  +DE +
Sbjct: 466 IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVM 525

Query: 241 ELQNEMMGRGL 251
            +  +M  +GL
Sbjct: 526 HIFIKMKQQGL 536



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 119/238 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D+  + T++  LC E +  +++ L+  M   GL  + +   TL+D +  A  
Sbjct: 601 MLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASR 660

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LLD M+ + ++  +V++  L+ G CK+G +  A   F  M   G+ P V  Y  
Sbjct: 661 MDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNT 720

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GL +      AR L+  M K   +     Y+ ++DG+ K+  F EA  +   +  + 
Sbjct: 721 ILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMD 780

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
           + LD+  +  ++ GL + G  ++A  LF  +   G++P  +    + +   E G+++E
Sbjct: 781 LQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEE 838



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   +++ D+  YG ++  LC   K  +++ L   M   G+  +  I   ++  Y K G 
Sbjct: 426 MSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGA 485

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SE   LL+ M+ + I      F  +I    K  ++ E +  F +M   GL PNV  Y  
Sbjct: 486 LSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT 545

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++ A   F++M    + P+   + +L+ G    + +++   L   M   G
Sbjct: 546 LIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG 605

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  + +++  L + G + EAR L   M+  G+ PD I   +L+  H     MDEA+
Sbjct: 606 IRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAV 665

Query: 241 ELQNEMMGRGL 251
           +L + M+  GL
Sbjct: 666 KLLDGMVSAGL 676



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K D   Y TII GLC     + ++ +  +M + G+  + +  T ++D   KA  
Sbjct: 321 MIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQS 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+D  ++    T+  LI G   +G   E +     M    L P+V  Y  
Sbjct: 381 VDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGL 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK      AR+LFD M ++ + P  T Y  ++ GY K  +  E  +L N M   G
Sbjct: 441 LLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANG 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   + +++   ++   + E   +F +M  +G+ P+ +   +L+    + G +D+A+
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560

Query: 241 ELQNEMMGRGL 251
              N+M+  G+
Sbjct: 561 LQFNQMINEGV 571



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K D   Y  II GLC     + ++ +  +M + G+  N      L+  Y   G+
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E +  + EM    +E  V T+ +L+D LCK+G   EA   F  M   G+ P+V +Y  
Sbjct: 416 WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGI 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ G  KK  +    +L + M    + P+   +  +I  Y K     E +++  +M + G
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+  L + G + +A + F++MI  G+ P+ ++  SL+         ++  
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVE 595

Query: 241 ELQNEMMGRGL 251
           EL  EM+ +G+
Sbjct: 596 ELFLEMLNQGI 606



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 111/234 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T+I G C  S+ +++  LL  M   GL  N V   TL+  Y KAG    A 
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EML   +   V T+  +++GL +SG   EA + +  M       ++  Y+ ++DG 
Sbjct: 701 CLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGF 760

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK NC + A  +F  +   D+  D   +  +IDG  K    ++A++L   +   G+   +
Sbjct: 761 CKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSV 820

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y  +   L   G L+E   LF  M   G  P+  +  +L++K  +RG +  A
Sbjct: 821 VTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRA 874



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 7/249 (2%)

Query: 7   KADLPLYGTIIWGLCIESKF-EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + D  +   ++ GLC   +  E   +LL +M E G     V   TL+          EA 
Sbjct: 116 RVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEAR 175

Query: 66  SLLDEML---DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            LL  M+   DS     VV++ ++I+G    G V +A   F  M   G+ P+V  Y  +I
Sbjct: 176 ELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTII 232

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK   ++RA ++F +M ++ + P+   Y  +IDG  K +    A  +  +M + GV 
Sbjct: 233 DGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVK 292

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
                Y +++ GL +   +  A  +F +MI RG+ PD +   +++    +   +D+A  +
Sbjct: 293 PSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGV 352

Query: 243 QNEMMGRGL 251
             +M+ +G+
Sbjct: 353 FQQMIDKGV 361



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K +   Y  +I G     ++E+    + EM  + L  +      L+D   K G+
Sbjct: 391 MIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGK 450

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA SL D M+   I+ +V  + +++ G  K G + E  D    M   G+ PN  ++  
Sbjct: 451 CNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNT 510

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I    K+  I+   ++F +M ++ + P+   Y  LID   K     +A+   N+M   G
Sbjct: 511 VICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEG 570

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   + SLV+GL      ++   LF EM+ +GI PD +   ++L    + G + EA 
Sbjct: 571 VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEAR 630

Query: 241 ELQNEMMGRGL 251
            L + M+  GL
Sbjct: 631 RLIDSMVCMGL 641



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 113/241 (46%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++ ++++GLC   K+E  + L  EM   G+  + V   T++    K G   EA  L+D M
Sbjct: 577 VFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM 636

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++  V+++  LIDG C +  + EA+     M   GL PN+  Y  L+ G CK   I
Sbjct: 637 VCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRI 696

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A  LF EM ++ + P    Y  +++G  +   F EA  L   M +      +  Y+ +
Sbjct: 697 DNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSII 756

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G  +     EA  +F  +    +  D I    ++   ++ G  ++A++L   +   GL
Sbjct: 757 LDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGL 816

Query: 252 L 252
           +
Sbjct: 817 V 817



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 95/204 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ G C   + +++  L  EM   G+T       T+++  F++G 
Sbjct: 671 MVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  L   M+ SR   ++ T+ +++DG CK+    EA   F  +    L  ++  +  
Sbjct: 731 FSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNI 790

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGL K    E A +LF  +P   ++P    Y  + +  ++  S +E   L + M + G
Sbjct: 791 MIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSG 850

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
              + +   +L+  L   G +  A
Sbjct: 851 TAPNSHMLNALIRKLLDRGEIPRA 874



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 73/163 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+ G C  + F+++  +   +    L  + +    ++D  FK G   +A+ L   + 
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIP 812

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + +  +VVT+ ++ + L + G + E    F  M   G  PN  +  ALI  L  +  I 
Sbjct: 813 ANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIP 872

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
           RA     ++ +++   + +  + LI  + + E  + A +L  +
Sbjct: 873 RAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEK 915



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/230 (19%), Positives = 93/230 (40%), Gaps = 45/230 (19%)

Query: 64  ALSLLDEML---DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           A+S  + ML    +++     T+ ++I   C+ G +      FG +   G   +  V   
Sbjct: 65  AVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQ 124

Query: 121 LIDGLC-KKNCIERARNLFDEMPK--------------------------RDMI------ 147
           L+ GLC  K   E    L  +MP+                          R+++      
Sbjct: 125 LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDG 184

Query: 148 ------PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
                 PD  +Y  +I+G+       +A +L     E+GV  D+  Y +++ GL +   +
Sbjct: 185 QDSSCSPDVVSYNIVINGFFNEGQVDKAYSL---FLEMGVSPDVVTYNTIIDGLCKAQEV 241

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             A  +F +M+ +G+ P+ +   +++    +   +D A  +  +M+ +G+
Sbjct: 242 DRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGV 291


>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
 gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 127/248 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K + A++  YG +I G+C   + E +++L++EM+  GL  N +I  TL+D Y K G   E
Sbjct: 65  KGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDE 124

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +   M     E  + T   + DGL K     EA  +   M + G+ PNV  YT LID
Sbjct: 125 AFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLID 184

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             CK+     A+ LF EM K    P+   Y  LIDG+ K    KEA  L++ M   G+  
Sbjct: 185 IYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFP 244

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  YTSL+ G    G L +A  LF+E+  +G+  + +   +++    + G  +EA +L 
Sbjct: 245 DIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLY 304

Query: 244 NEMMGRGL 251
           +EM   GL
Sbjct: 305 DEMTEAGL 312



 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 124/248 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K IKAD+ +Y  +I   C     + +  L  E+ E GL AN      L+D   KAGE   
Sbjct: 30  KGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGEMEA 89

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L++EM    ++V  + +  LIDG CK GL+ EA      M   G   ++     + D
Sbjct: 90  AEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIAD 149

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K N  E A+     M ++ ++P+  +YT LID Y K  +F EA  L   M + G + 
Sbjct: 150 GLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEP 209

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y  L+ G S+ G ++EA  L  EM  +GI PD     SLL      G +D+A+EL 
Sbjct: 210 NAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELF 269

Query: 244 NEMMGRGL 251
           NE+  +GL
Sbjct: 270 NEVRQKGL 277



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 103/198 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  + D+    TI  GL   ++ E++K  L  M E G+  N V  TTL+D Y K G 
Sbjct: 132 MEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGN 191

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM  +  E   VT+ VLIDG  K G ++EA +    M   G+ P++  YT+
Sbjct: 192 FVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTS 251

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    ++ A  LF+E+ ++ +  +   YTA+I G  K    +EA  L + MTE G
Sbjct: 252 LLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAG 311

Query: 181 VDLDLNAYTSLVWGLSRC 198
           +  D   YTSLV  L + 
Sbjct: 312 LTPDDRVYTSLVSSLHKA 329



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 102/202 (50%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           T L+D +  +G+  E   + +EM +  I+  +  + V+I+  CK G  + A   F  + +
Sbjct: 5   TLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTE 64

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            GL  NV  Y ALIDG+CK   +E A  L +EM  R +  +   Y  LIDGY K     E
Sbjct: 65  KGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDE 124

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A  ++  M + G + D+    ++  GL +    +EA+     MI +G++P+ +   +L+ 
Sbjct: 125 AFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLID 184

Query: 229 KHYERGNMDEAIELQNEMMGRG 250
            + + GN  EA +L  EM   G
Sbjct: 185 IYCKEGNFVEAKKLFQEMKKAG 206



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 77/137 (56%)

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           VA YT LID       I+    +F+EM ++ +  D   YT +I+   K  + K A  L +
Sbjct: 1   VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            +TE G+  +++ Y +L+ G+ + G ++ A +L +EM  RG+  ++++  +L+  + +RG
Sbjct: 61  ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120

Query: 235 NMDEAIELQNEMMGRGL 251
            +DEA ++Q  M  +G 
Sbjct: 121 LIDEAFKVQVIMEKKGF 137


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 3/242 (1%)

Query: 13  YGTIIWGLCIESK---FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           Y TII G C   +         LL EM E G++ N V    L++ Y K    + A+ + +
Sbjct: 223 YNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFE 282

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM    I  +VVT+  L+ GLC  G V E +     M D GL PN+A   ++++G CKK 
Sbjct: 283 EMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKG 342

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +  A    D M ++++ P+   YT L+DGY + +  K+AL +K  M+  GV  +   Y 
Sbjct: 343 MMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYN 402

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+ G +R G  +    L  EM  +G+  D +    L+     +G + +A++L +EM+  
Sbjct: 403 CLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMV 462

Query: 250 GL 251
           GL
Sbjct: 463 GL 464



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 121/269 (44%), Gaps = 35/269 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I A +  Y  ++WGLC E K E+   L+ EMK+ GL  N     ++++ + K G 
Sbjct: 284 MKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGM 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A   +D M    ++  VVT+ +L+DG  +   +++A+     M   G+ PN  +Y  
Sbjct: 344 MTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNC 403

Query: 121 LIDG-----------------------------------LCKKNCIERARNLFDEMPKRD 145
           LI G                                   LC K  + +A  L DEM    
Sbjct: 404 LIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVG 463

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P    Y  +I+GY +  + K A  ++ RM +     ++  Y   +  L R G ++E  
Sbjct: 464 LEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETN 523

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERG 234
            L +EM+ +G++P+ +   ++ +   E+G
Sbjct: 524 ELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 116/234 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++ G C +S    +  +  EMK+ G+ A+ V  + L+      G+  E + L+DEM 
Sbjct: 261 FNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMK 320

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +   + T   +++G CK G++ +A  +   M    + PNV  YT L+DG  + + ++
Sbjct: 321 DLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMK 380

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + + M  + + P+   Y  LI G+ ++  ++    L + M   GV  D+  Y  L+
Sbjct: 381 DALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLI 440

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             L   G +++A  L  EM+  G+ P  +   +++  + E+GN+  A E++  M
Sbjct: 441 GALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRM 494



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 89/171 (52%), Gaps = 3/171 (1%)

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L  R+   + TF ++I GLCK+G +R+A D    +  +GL P+V  Y  +IDG CK+   
Sbjct: 177 LRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRA 236

Query: 132 ERARN---LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
            R  +   L  EM +  + P+   +  L++GY K  +   A+ +   M + G+   +  Y
Sbjct: 237 GRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTY 296

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           ++LVWGL   G ++E   L  EM   G++P+     S+L    ++G M +A
Sbjct: 297 SALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDA 347



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 89/205 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ KN+K ++  Y  ++ G     K +D+  +   M   G+  N  I   L+  + + G+
Sbjct: 354 MEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGD 413

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 LLDEM    +   +VT+ VLI  LC  G VR+A+     M   GL P    Y  
Sbjct: 414 WRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNT 473

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G C+K  I+ A  +   M K     +   Y   I    +    +E   L N M E G
Sbjct: 474 IINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKG 533

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEAR 205
           +  +   Y ++  G+   G+  + R
Sbjct: 534 LVPNGVTYDTIKEGMMEKGYTPDVR 558


>gi|399107208|gb|AFP20368.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 70  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGXVEEALDYFQTCRFNGLAINSXFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGXVEEALDYFQTCRFNGLAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 124 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGXVEEALDYFQTCRFNGLAINSX 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  +   
Sbjct: 67  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGXVEEALDYFQTCRFNGLAINSXF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|399107202|gb|AFP20365.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 70  VEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMXLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M       D   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +BEA+ L  
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMXLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G   +V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMXLFKRM 185



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 67  SGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 124/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I  LC   KF  +  L  +M   G   +    TT+++   K GE + A  LL +M 
Sbjct: 171 FTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKME 230

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++  +  VVT+  +ID   K   V EA+D F  M   G+ P++  Y +LI GLC  +  +
Sbjct: 231 EAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWK 290

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L +EM   +++PD   +  L+D   K     EA  +   MTE+GV+ D+  Y+SL+
Sbjct: 291 EASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLM 350

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +G S    + EAR LF  MI +G  PD      L+  + +   +DEA +L NEM+ +GL
Sbjct: 351 YGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGL 409



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 122/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  NI  D+  +  ++  +C E K  +++ +L  M E G+  + V  ++LM  Y    E
Sbjct: 299 MRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSE 358

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D M+    +  V ++ +LI+G CK   + EA   F  M   GL PN   Y  
Sbjct: 359 VVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNT 418

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC+   +  ARNLF  M     +P+   Y+ L+DG+ K   F +A  L   M    
Sbjct: 419 LIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTY 478

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y  L+  + + G+L++AR LF E+  +G+ P+  +  +++    + G +DEA+
Sbjct: 479 SKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEAL 538

Query: 241 ELQNEM 246
           E    M
Sbjct: 539 EAFRNM 544



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  D+  Y ++I GLC  S+++++  LL+EM+   +  + V    L+D   K G+
Sbjct: 264 MKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGK 323

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  +L  M +  +E  VVT+  L+ G      V EA   F  M   G  P+V  Y  
Sbjct: 324 VSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNI 383

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   I+ A+ LF+EM  + + P+  +Y  LI G  +  S +EA NL   M   G
Sbjct: 384 LINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNG 443

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y+ L+ G  + G+  +A  LF  M      P+ ++   L+    + GN+ +A 
Sbjct: 444 NLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDAR 503

Query: 241 ELQNEMMGRGLLSGSK 256
           +L +E+  +GL   ++
Sbjct: 504 KLFSELFVKGLQPNAQ 519



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 129/281 (45%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + D+  Y TII GLC   +   +  LL +M+E G   N V  +T++D++ K   
Sbjct: 194 MVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRR 253

Query: 61  PSEAL-----------------------------------SLLDEMLDSRIEVTVVTFCV 85
            +EAL                                   +LL+EM    I   +VTF V
Sbjct: 254 VNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNV 313

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+D +CK G V EA      M + G+ P+V  Y++L+ G   ++ +  AR LFD M  + 
Sbjct: 314 LVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKG 373

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             PD  +Y  LI+GY K +   EA  L N M   G+  +  +Y +L+ GL + G L+EAR
Sbjct: 374 CKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREAR 433

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            LF  M   G LP+      LL    ++G   +A  L   M
Sbjct: 434 NLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAM 474



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 118/248 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  Y ++++G  + S+  +++ L   M   G   +      L++ Y K     EA 
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAK 398

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +EM+   +    V++  LI GLC+ G +REA + F  M   G  PN+  Y+ L+DG 
Sbjct: 399 QLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGF 458

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+    +A  LF  M      P+   Y  LID   K  + ++A  L + +   G+  + 
Sbjct: 459 CKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNA 518

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+++ GL + G L EA   F  M   G  PDEI    +++      +   A++L  E
Sbjct: 519 QIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGE 578

Query: 246 MMGRGLLS 253
           M  +G ++
Sbjct: 579 MRDKGFIA 586



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 4/221 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  Y  +I G C   + +++K L +EM   GLT N V   TL+    + G 
Sbjct: 369 MITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGS 428

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +L   M  +     + T+ +L+DG CK G   +A   F  M      PN+ +Y  
Sbjct: 429 LREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNI 488

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID +CK   +  AR LF E+  + + P+   YT +I+G  K     EAL     M E G
Sbjct: 489 LIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG 548

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARV--LFHEMIGRGILPD 219
              D  +Y  ++ G     H  E+R   L  EM  +G + D
Sbjct: 549 CPPDEISYNVIIRGFLH--HKDESRAVQLIGEMRDKGFIAD 587



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 103/208 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M+  GL+ N    + L++ +        A S+L +++   ++ T+VTF  LI+ LC
Sbjct: 120 LTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLC 179

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G   +A++ F  M   G  P+V  YT +I+GLCK      A  L  +M +    P+  
Sbjct: 180 KVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVV 239

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ +ID + K     EAL++ + M   G+  D+  Y SL+ GL      +EA  L +EM
Sbjct: 240 TYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM 299

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEA 239
               I+PD +    L+    + G + EA
Sbjct: 300 RSLNIMPDIVTFNVLVDTICKEGKVSEA 327



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 86/173 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC      +++ L   M  NG   N    + L+D + K G   +A  L   M 
Sbjct: 416 YNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQ 475

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  +  +V + +LID +CKSG +R+A   F  +   GL PN  +YT +I+GLCK+  ++
Sbjct: 476 STYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLD 535

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            A   F  M +    PD  +Y  +I G+L H+    A+ L   M + G   D+
Sbjct: 536 EALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 1/199 (0%)

Query: 49  TTLMDAYFKAGEPSEA-LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           T L+ A  K G+  +  +SL  +M  + +   + T  +LI+       V  A     ++ 
Sbjct: 101 TKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKII 160

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             GL P +  +T LI+ LCK     +A  LFD+M  R   PD   YT +I+G  K     
Sbjct: 161 KLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETA 220

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A  L  +M E G   ++  Y++++    +   + EA  +F  M  +GI PD     SL+
Sbjct: 221 AAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLI 280

Query: 228 KKHYERGNMDEAIELQNEM 246
           +         EA  L NEM
Sbjct: 281 QGLCNFSQWKEASALLNEM 299



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 37/155 (23%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    K +L +Y  +I  +C      D++ L SE+   GL  N  I TT          
Sbjct: 474 MQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTT---------- 523

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                                    +I+GLCK GL+ EA++ F  M + G  P+   Y  
Sbjct: 524 -------------------------IINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNV 558

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD--TTAY 153
           +I G        RA  L  EM  +  I D  TTA+
Sbjct: 559 IIRGFLHHKDESRAVQLIGEMRDKGFIADVGTTAW 593


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 123/234 (52%), Gaps = 4/234 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N +  + +Y TII  LC + +  ++  L S+M   G++ N    ++L+      G 
Sbjct: 185 MEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGH 244

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L   M+  +I    +TF  L+D LCK G+V +A      M    L P+V  Y +
Sbjct: 245 WKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNS 304

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ + +  N+FD M ++  +P   +YT LI+GY K +   +A+ L   M++ G
Sbjct: 305 LMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQG 364

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKH 230
           +  D   Y +L+ GL   G L++A  LFHEM+  G +PD     IL   L K H
Sbjct: 365 LIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNH 418



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 126/250 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+  + D+  YGT+I GLC       +   L  M++       V+ +T++D+  K  +
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQ 209

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EALSL  +ML   I     T+  LI GLC  G  +EAI  F  M    + P+   +  
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 269

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK+  + +A  + D M + D+ PD   Y +L+DG+       + +N+ + M   G
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKG 329

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               + +YT+L+ G  +   + +A  LF EM  +G++PD +   +L+      G + +AI
Sbjct: 330 CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAI 389

Query: 241 ELQNEMMGRG 250
            L +EM+  G
Sbjct: 390 ALFHEMVVYG 399



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 125/252 (49%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   ++K D+  Y +++ G C+ S+   +  +   M   G   + +  TTL++ Y K   
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EM    +    VT+  LI GLC  G +R+AI  F  M  +G  P++  Y  
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L D LCK + +  A  L   +   ++ PD   Y+ ++DG  +    + A +L ++++  G
Sbjct: 410 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD-EA 239
           +  D+  YT ++ GL + G L EA  LF EM   G  P+     +L+ + + R N    A
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNAC-TYNLITRGFLRNNETLRA 528

Query: 240 IELQNEMMGRGL 251
           I+L  EM+ RG 
Sbjct: 529 IQLFQEMLSRGF 540



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 94/190 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M   G+  NT     L++++        A S+L ++L    + +  TF  LI GLC
Sbjct: 76  LYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLC 135

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + EA+  F +M   G  P+V  Y  LI+GLCK      A      M +R+  P   
Sbjct: 136 VEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVV 195

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ +ID   K     EAL+L + M   G+  +   Y+SL+ GL   GH +EA  LF+ M
Sbjct: 196 VYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAM 255

Query: 212 IGRGILPDEI 221
           I R I+PD++
Sbjct: 256 IHRKIMPDQL 265



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  +   Y ++I GLCI   ++++  L   M    +  + +   TL+DA  K G 
Sbjct: 220 MLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGM 279

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  ++D M+ S ++  VVT+  L+DG C    + + ++ F  M   G  P+V  YT 
Sbjct: 280 VVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTT 339

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +++A  LF+EM ++ +IPDT  Y  LI G       ++A+ L + M   G
Sbjct: 340 LINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 399

Query: 181 -----------------------------------VDLDLNAYTSLVWGLSRCGHLQEAR 205
                                              +D D++ Y+ ++ G+ R G L+ AR
Sbjct: 400 QIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAAR 459

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            LF ++  +G+ PD      ++    ++G + EA +L  EM
Sbjct: 460 DLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 500



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 103/212 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y T+I GLC   +  D+  L  EM   G   + V    L D   K   
Sbjct: 360 MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHR 419

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA+ LL  +  + ++  +  + +++DG+C++G +  A D F ++   GLHP+V  YT 
Sbjct: 420 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 479

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLC++  +  A  LF EM +    P+   Y  +  G+L++     A+ L   M   G
Sbjct: 480 MINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRG 539

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
             +D++  T LV  LS  G  Q  + +  E +
Sbjct: 540 FSIDVSTTTLLVEMLSDDGLDQSVKQILCEFV 571



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 1/229 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C     + +  L  EM + GL  +TV   TL+      G   +A++L  EM+
Sbjct: 337 YTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMV 396

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+ +L D LCK+  + EA+     +    L P++ +Y+ ++DG+C+   +E
Sbjct: 397 VYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELE 456

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR+LF ++  + + PD   YT +I+G  +     EA  L   M E G   +   Y  + 
Sbjct: 457 AARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLIT 516

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            G  R      A  LF EM+ RG   D +   +LL +      +D++++
Sbjct: 517 RGFLRNNETLRAIQLFQEMLSRGFSID-VSTTTLLVEMLSDDGLDQSVK 564



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 106/219 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L ++ + G   +T   TTL+      G+  EAL L D+M     +  V+T+  LI+GLC
Sbjct: 111 VLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLC 170

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G    AI +   M      P V VY+ +ID LCK   +  A +LF +M  + + P+  
Sbjct: 171 KVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNF 230

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LI G      +KEA+ L   M    +  D   + +LV  L + G + +A  +   M
Sbjct: 231 TYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVM 290

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I   + PD +   SL+  H  R  M + + + + M+ +G
Sbjct: 291 IQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKG 329



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 97/226 (42%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           +D+  L + M       + V  + L+ +  +    S  LSL  +M    I     T  +L
Sbjct: 36  DDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNIL 95

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I+  C    +  A    G +   G  P+ A +T LI GLC +  I  A  LFD+M     
Sbjct: 96  INSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGF 155

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            PD   Y  LI+G  K  +   A+     M +      +  Y++++  L +   L EA  
Sbjct: 156 QPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALS 215

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           LF +M+ +GI P+     SL+      G+  EAI L   M+ R ++
Sbjct: 216 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIM 261



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 65/154 (42%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + +A+  F RM      P++  ++ L+  + +        +L+ +M    +  +T     
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI+ +        A ++   + ++G       +T+L+ GL   G + EA  LF +M G G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
             PD +   +L+    + GN   AI     M  R
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQR 188


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 131/251 (52%), Gaps = 4/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG  +K D   Y  +I G     K E +  L +EM E+G++ N V    +++ Y    +
Sbjct: 473 MKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAK 532

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  +M++S    +  T+ ++I G  K+  + EA ++ G+M   GL PNV  YT+
Sbjct: 533 VDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTS 592

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            IDGLCK      A  +F EM KRD  P+   Y++LIDG  +    ++A     R+ + G
Sbjct: 593 FIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDG 648

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + +++ YT+LV GL   G   EA  L   M  +G+ P E +  +LL    +   ++ A+
Sbjct: 649 CEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESAL 708

Query: 241 ELQNEMMGRGL 251
           ++ + M+  G 
Sbjct: 709 KIFDSMVTTGF 719



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 118/243 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y ++I G C     + +  +   M ++G   N+V  + L++     G   EA+ +L
Sbjct: 236 DTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDML 295

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM+D  IE TV  + + I  LC +G   EA+   G+M   G  PNV  YTALI GL + 
Sbjct: 296 EEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRD 355

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              E A  ++ +M    ++P    Y+ALI+       F+ AL +   M       +   Y
Sbjct: 356 GKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETY 415

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             ++ G    G++Q+A  +F +M+  G  P+ I    ++  ++++G M+ A+ L   M G
Sbjct: 416 NVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKG 475

Query: 249 RGL 251
            GL
Sbjct: 476 NGL 478



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 116/255 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+  +  Y   I  LC   +  ++  LL +MK+ G   N    T L+    + G+
Sbjct: 298 MIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGK 357

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +  T VT+  LI+ L   G    A+  F  M      PN   Y  
Sbjct: 358 FEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNV 417

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C    I++A  +FD+M K    P+   Y  +I  Y K      A+ L   M   G
Sbjct: 418 IIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNG 477

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD   Y +L+ G SR G L+ A  LF+EM+  GI P+ +   +++  +     +D+A+
Sbjct: 478 LKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDAL 537

Query: 241 ELQNEMMGRGLLSGS 255
            L  +M+  G +  S
Sbjct: 538 ALFWKMVESGNVPSS 552



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 108/230 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II G C     + +  +  +M + G + N +    ++  YFK G  + A+ LL+ M 
Sbjct: 415 YNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMK 474

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + +++   T+  LI G  + G +  A   F  M + G+ PNV  Y A+I+G      ++
Sbjct: 475 GNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVD 534

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M +   +P +  Y  +I G+ K     EA N   +M + G+  ++  YTS +
Sbjct: 535 DALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            GL + G    A  +FHEM  R   P+     SL+    + G  ++A  L
Sbjct: 595 DGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL 644



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 110/237 (46%), Gaps = 4/237 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G    ++  +++    +M + GL  N +  T+ +D   K G  S A  +  EM 
Sbjct: 555 YNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMK 614

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  + T+  LIDGLC+ G   +A     R+ D G  PNV  YT L+ GLC K    
Sbjct: 615 KRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCY 670

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L + M K+ + P    Y AL+ G  K+   + AL + + M   G    L+ Y +L+
Sbjct: 671 EADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALI 730

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
             L +    Q+A+ +F  M+ +    DE++   LL    + G  D ++EL + M  R
Sbjct: 731 CALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 35/284 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    ++  Y  +I GL  + KFE +  +  +M  +GL    V  + L++  +  G 
Sbjct: 333 MKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGR 392

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL++ + ML         T+ V+I G C  G +++A   F +M   G  PNV  Y  
Sbjct: 393 FETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNI 452

Query: 121 -----------------------------------LIDGLCKKNCIERARNLFDEMPKRD 145
                                              LI G  +   +E A +LF+EM +  
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+   Y A+I+GYL      +AL L  +M E G       Y  ++ G S+   + EA 
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAE 572

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
               +M+ +G+LP+ I   S +    + G    A ++ +EM  R
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKR 616



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 106/222 (47%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           EM  +G+  N      ++      G+  EA  ++  +          T+  LI G CK+G
Sbjct: 192 EMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNG 251

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            +  A + F RM   G  PN   Y+ALI+GLC +  +E A ++ +EM  + + P   AYT
Sbjct: 252 NLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYT 311

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
             I          EA+ L  +M + G   ++  YT+L+ GLSR G  + A  ++H+M+  
Sbjct: 312 IPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD 371

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           G++P  +   +L+ + Y  G  + A+ +   M+    L  ++
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTE 413



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 92/199 (46%), Gaps = 4/199 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK ++   +L  Y ++I GLC E + ED++ LL    ++G   N    TTL+      G 
Sbjct: 613 MKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGR 668

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L++ M    ++ +   +  L+ G CK+  V  A+  F  M   G  P ++ Y A
Sbjct: 669 CYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKA 728

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK N  ++A+ +F  M K+    D   +T L+DG LK      +L L + M    
Sbjct: 729 LICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRN 788

Query: 181 VDLDLNAYTSLVWGLSRCG 199
             L+      L   LS  G
Sbjct: 789 CTLNFQTRVMLARELSALG 807



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 9/197 (4%)

Query: 59  GEPSEALSLLDEMLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
           GE    + +L E+  +     T+ +F  L+  L K  +     D +  M + G+ PN+  
Sbjct: 145 GEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFT 204

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           + A+I  LC K  ++ A  +   +      PDT  YT+LI G+ K+ +   A  + +RM 
Sbjct: 205 FNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMV 264

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYER 233
           + G D +   Y++L+ GL   G L+EA  +  EMI +GI P      I  +SL     + 
Sbjct: 265 KDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLC----DA 320

Query: 234 GNMDEAIELQNEMMGRG 250
           G   EA++L  +M  RG
Sbjct: 321 GRSCEAVKLLGKMKKRG 337



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 6/202 (2%)

Query: 54  AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS-GLVREAIDYFGRMP---DF 109
            +F   + S  +S+L+ ++  R+ V      +L+   C++ G V+  I     +    DF
Sbjct: 104 THFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDF 163

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G    +  ++ L+  L K +     R+++ EM    + P+   + A+I         +EA
Sbjct: 164 GY--TLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEA 221

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             +   +   G   D   YTSL+ G  + G+L  A  +F  M+  G  P+ +   +L+  
Sbjct: 222 ELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALING 281

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
               G ++EA+++  EM+ +G+
Sbjct: 282 LCSEGRLEEAMDMLEEMIDKGI 303


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 120/240 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TI++GLC   +  D++ LL  M    L  + V   TL+  Y + G   EA  L  E+ 
Sbjct: 310 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 369

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VVT+  LIDGLC+ G +  A+     M   G  P+V  +T  + G CK   + 
Sbjct: 370 YRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLP 429

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ LFDEM  R + PD  AY   I G LK     +A  ++  M   G   DL  Y   +
Sbjct: 430 MAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 489

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL + G+L+EA  L  +M+  G++PD +   S++  H   G++ +A  L  EM+ +G+ 
Sbjct: 490 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIF 549



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  DL  Y T+I+G        ++ LL +E++   L  + V   TL+D   + G+
Sbjct: 333 MVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGD 392

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L DEM+    +  V TF   + G CK G +  A + F  M + GL P+   Y  
Sbjct: 393 LDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYIT 452

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  K     +A  + +EM  R   PD   Y   IDG  K  + KEA  L  +M   G
Sbjct: 453 RIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG 512

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YTS++      GHL++AR LF EM+ +GI P  +    L+  +  RG +  AI
Sbjct: 513 LVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAI 572

Query: 241 ELQNEMMGRGL 251
               EM  +G+
Sbjct: 573 LHFFEMHEKGV 583



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 117/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GL    + E +K L+ +M   GL  +      L+  Y + G+  EA  L +EML
Sbjct: 240 YNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEML 299

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 TVVT+  ++ GLCK G V +A      M +  L P++  Y  LI G  +   I 
Sbjct: 300 SRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIG 359

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF E+  R + P    Y  LIDG  +      A+ LK+ M + G D D+  +T+ V
Sbjct: 360 EAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFV 419

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G+L  A+ LF EM+ RG+ PD    I+ +    + G+  +A  +Q EM+ RG 
Sbjct: 420 RGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 478



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++   C +   +++  LL +M+  G + N V    L++    +GE  +A  L+ +ML
Sbjct: 205 YNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDML 264

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +EV+V T+  LI G C+ G + EA      M   G  P V  Y  ++ GLCK   + 
Sbjct: 265 RLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVS 324

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR L D M  ++++PD  +Y  LI GY +  +  EA  L   +    +   +  Y +L+
Sbjct: 325 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLI 384

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL R G L  A  L  EMI  G  PD     + ++   + GN+  A EL +EM+ RGL
Sbjct: 385 DGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGL 443



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 114/241 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + T + G C       +K L  EM   GL  +     T +    K G+PS+A  + 
Sbjct: 411 DVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQ 470

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EML       ++T+ V IDGL K G ++EA +   +M   GL P+   YT++I      
Sbjct: 471 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 530

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             + +AR LF EM  + + P    YT LI  Y      K A+     M E GV  ++  Y
Sbjct: 531 GHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 590

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ GL +   + +A   F EM  +GI P++     L+ ++   G+  EA+ L  +M+ 
Sbjct: 591 NALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 650

Query: 249 R 249
           R
Sbjct: 651 R 651



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 109/215 (50%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E G+    V   T++D++ K G   EAL LL +M         VT+ VL++GL  SG 
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + +A +    M   GL  +V  Y  LI G C+K  IE A  L +EM  R  +P    Y  
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNT 312

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           ++ G  K     +A  L + M    +  DL +Y +L++G +R G++ EA +LF E+  R 
Sbjct: 313 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS 372

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + P  +   +L+      G++D A+ L++EM+  G
Sbjct: 373 LAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHG 407



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 106/228 (46%), Gaps = 35/228 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    DL  Y   I GL      +++  L+ +M  NGL  + V  T+++ A+  AG 
Sbjct: 473 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 532

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L  EML   I  +VVT+ VLI      G ++ AI +F  M + G+HPNV  Y A
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 592

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +++A N F EM  + + P+   YT LI+         E  NL        
Sbjct: 593 LINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILIN---------ENCNL-------- 635

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
                             GH QEA  L+ +M+ R I PD     SLLK
Sbjct: 636 ------------------GHWQEALRLYKDMLDREIQPDSCTHRSLLK 665



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 1/237 (0%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYF-KAGEPSEALSLLDEMLDS 74
           ++W    +S  E   L+  +M   GL  +   C  ++     +      A  + + M++ 
Sbjct: 137 LLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVEC 196

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            I  TVVT+  ++D  CK G+V+EA+    +M   G  PN   Y  L++GL     +E+A
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQA 256

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
           + L  +M +  +      Y  LI GY +    +EA  L   M   G    +  Y ++++G
Sbjct: 257 KELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYG 316

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L + G + +AR L   M+ + ++PD +   +L+  +   GN+ EA  L  E+  R L
Sbjct: 317 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSL 373



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II    +      ++ L  EM   G+  + V  T L+ +Y   G    A+    EM 
Sbjct: 520 YTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 579

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   V+T+  LI+GLCK   + +A ++F  M   G+ PN   YT LI+  C     +
Sbjct: 580 EKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQ 639

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            A  L+ +M  R++ PD+  + +L    LKH
Sbjct: 640 EALRLYKDMLDREIQPDSCTHRSL----LKH 666



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 74/154 (48%)

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           A + +  M + G+ P V  Y  ++D  CKK  ++ A  L  +M      P+   Y  L++
Sbjct: 186 AREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVN 245

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           G       ++A  L   M  +G+++ +  Y  L+ G    G ++EA  L  EM+ RG +P
Sbjct: 246 GLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVP 305

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +   +++    + G + +A +L + M+ + L+
Sbjct: 306 TVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLM 339


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 122/227 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +IKA + +Y  II  LC +     ++ L +EM + G+  + +  + ++D++ ++G 
Sbjct: 67  MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  LL +M++ +I   VVTF  LI+ L K G V EA + +G M   G+ P    Y +
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG CK++ +  A+ + D M  +   PD   ++ LI+GY K +     + +   M   G
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +  +   YT+L+ G  + G L  A+ L + MI  G+ P+ I   S+L
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 124/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGTII GLC     E +  LLS+M+E  + A+ VI   ++D   K G    A +L  EM 
Sbjct: 44  YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I   V+T+  +ID  C+SG   +A      M +  ++P+V  ++ALI+ L K+  + 
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  ++ +M +R + P T  Y ++IDG+ K +   +A  + + M       D+  +++L+
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   +     +F EM  RGI+ + +   +L+    + G++D A +L N M+  G+
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 4/249 (1%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  + T++ GLC E +   +  L+  M E G         T+++   K G+   AL+
Sbjct: 7   RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYG----TIINGLCKMGDTESALN 62

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M ++ I+  VV +  +ID LCK G    A + F  M D G+ P+V  Y+ +ID  C
Sbjct: 63  LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +      A  L  +M +R + PD   ++ALI+  +K     EA  +   M   G+     
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y S++ G  +   L +A+ +   M  +   PD +   +L+  + +   +D  +E+  EM
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242

Query: 247 MGRGLLSGS 255
             RG+++ +
Sbjct: 243 HRRGIVANT 251



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 111/214 (51%), Gaps = 4/214 (1%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E G   + V  TTLM+     G   +AL+L+D M++   +     +  +I+GLCK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
              A++   +M +  +  +V +Y A+ID LCK      A+NLF EM  + + PD   Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +ID + +   + +A  L   M E  ++ D+  +++L+  L + G + EA  ++ +M+ RG
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           I P  I   S++    ++  +++A  + + M  +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 88/182 (48%), Gaps = 4/182 (2%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M+++     VVTF  L++GLC  G V +A+    RM + G  P    Y  +I+GLCK   
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
            E A NL  +M +  +      Y A+ID   K      A NL   M + G+  D+  Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++    R G   +A  L  +MI R I PD +   +L+    + G + EA E+  +M+ RG
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 251 LL 252
           + 
Sbjct: 177 IF 178



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 63/133 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C + +  D+K +L  M     + + V  +TL++ Y KA      + +  EM 
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I    VT+  LI G C+ G +  A D    M   G+ PN   + +++  LC K  + 
Sbjct: 244 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELR 303

Query: 133 RARNLFDEMPKRD 145
           +A  + +++ K +
Sbjct: 304 KAFAILEDLQKSE 316


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  130 bits (326), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 137/287 (47%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           + GK + AD+  Y T++ G C   +FE    L+ EM E G +      + L+D   K G+
Sbjct: 286 LGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGK 345

Query: 61  PSEALSLL------------------------------DEMLDSRIEV-----TVVTFCV 85
             +A  L+                               E+L S + +       +T+ +
Sbjct: 346 IDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSI 405

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LID  C+SG +  AI YF RM   G+   V  Y +LI+G CK   +  A +LF EM  + 
Sbjct: 406 LIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKG 465

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P  T +T+LI GY K    ++A  L N+M + G+  ++  +T+L+ GL     + EA 
Sbjct: 466 VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEAS 525

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            LF E++ R I P E+    L++ +   G +D+A EL  +M  +GL+
Sbjct: 526 ELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLV 572



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 121/247 (48%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N++ +   Y  +I   C   + + +      M ++G+        +L++   K G+ S A
Sbjct: 395 NLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAA 454

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
            SL  EM +  +E T  TF  LI G CK   V++A   + +M D G+ PNV  +TALI G
Sbjct: 455 ESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISG 514

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC  N +  A  LFDE+ +R + P    Y  LI+GY +     +A  L   M + G+  D
Sbjct: 515 LCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPD 574

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y  L+ GL   G + +A+    ++  + +  +E+   +LL  + + G + EA+    
Sbjct: 575 TYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASC 634

Query: 245 EMMGRGL 251
           EM+ RG+
Sbjct: 635 EMIQRGI 641



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 129/247 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++     + ++I G C + + + +  L ++M +NG+T N    T L+       +
Sbjct: 461 MTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNK 520

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  L DE+++ +I+ T VT+ VLI+G C+ G + +A +    M   GL P+   Y  
Sbjct: 521 MAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRP 580

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    + +A++  D++ K+++  +   Y+AL+ GY +     EAL+    M + G
Sbjct: 581 LISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRG 640

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +++DL  +  L+ G  +    +    L  +M  +G+ PD ++  S++  + + G+  +A 
Sbjct: 641 INMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAF 700

Query: 241 ELQNEMM 247
           E  + M+
Sbjct: 701 ECWDLMV 707



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  DL  +  +I G   +   +    LL +M + GL  + VI T+++D Y K G 
Sbjct: 636 MIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGS 695

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A    D M+       VVT+  L++GLCK+G +  A   F RM    + PN   Y  
Sbjct: 696 FKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGC 755

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +D L K+  ++ A  L   M K  ++ +T  +  +I G+ K   F EA  + + MTE G
Sbjct: 756 FLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENG 814

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y++L++   R G++  +  L+  M+ RG+ PD +    L+      G +D+A 
Sbjct: 815 IFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAF 874

Query: 241 ELQNEMMGRGLLSGSK 256
           EL+++M+ RG++  +K
Sbjct: 875 ELRDDMLRRGIIPDNK 890



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+       +  Y  +I GLC   +  ++  +   +   GL A+ V   TL+  + +  +
Sbjct: 251 MEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQ 310

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + L+DEM++     T      L+DGL K G + +A +   ++  FG  PN+ VY A
Sbjct: 311 FEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNA 370

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+ LCK   +++A  L+  M   ++ P+   Y+ LID + +      A++  +RM + G
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   + AY SL+ G  + G L  A  LF EM  +G+ P      SL+  + +   + +A 
Sbjct: 431 IGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAF 490

Query: 241 ELQNEMMGRGL 251
           +L N+M+  G+
Sbjct: 491 KLYNKMIDNGI 501



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 122/252 (48%), Gaps = 1/252 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + IK     Y  +I G C + K + +  LL +M + GL  +T     L+      G  S+
Sbjct: 534 RKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSK 593

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A   +D++    +++  + +  L+ G C+ G + EA+     M   G++ ++  +  LID
Sbjct: 594 AKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLID 653

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G  K+   +   +L  +M  + + PD   YT++ID Y K  SFK+A    + M       
Sbjct: 654 GALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFP 713

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  YT+L+ GL + G +  A +LF  M    + P+ I     L    + GNM EAI L 
Sbjct: 714 NVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLH 773

Query: 244 NEMMGRGLLSGS 255
           + M+ +GLL+ +
Sbjct: 774 HAML-KGLLANT 784



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 114/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C       ++ L  EM   G+       T+L+  Y K  +  +A  L ++M+
Sbjct: 438 YNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMI 497

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+ I   V TF  LI GLC +  + EA + F  + +  + P    Y  LI+G C+   I+
Sbjct: 498 DNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKID 557

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L ++M ++ ++PDT  Y  LI G        +A +  + + +  V L+   Y++L+
Sbjct: 558 KAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALL 617

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G L EA     EMI RGI  D +    L+    ++ +     +L  +M  +GL
Sbjct: 618 HGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGL 676



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 36/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y  +I GLC   +   +K  + ++ +  +  N +  + L+  Y + G 
Sbjct: 566 MHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGR 625

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EALS   EM+   I + +V   VLIDG  K    +   D    M D GL P+  +YT+
Sbjct: 626 LMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTS 685

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           +ID                                   GLCK   ++RA  LF  M   +
Sbjct: 686 MIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAAN 745

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P++  Y   +D   K  + KEA+ L + M + G+  +   +  ++ G  + G   EA 
Sbjct: 746 VPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEAT 804

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +  EM   GI PD +   +L+ ++   GN+  +++L + M+ RGL
Sbjct: 805 KVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGL 850



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 103/211 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L +Y  +I  LC     + ++LL S M    L  N +  + L+D++ ++G    A+S  
Sbjct: 364 NLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYF 423

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+   I  TV  +  LI+G CK G +  A   F  M + G+ P    +T+LI G CK 
Sbjct: 424 DRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKD 483

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +++A  L+++M    + P+   +TALI G        EA  L + + E  +      Y
Sbjct: 484 LQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTY 543

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             L+ G  R G + +A  L  +M  +G++PD
Sbjct: 544 NVLIEGYCRDGKIDKAFELLEDMHQKGLVPD 574



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 109/251 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  ++     ++ GL    KF     L  E    G+  +   C+ ++ +  +  +
Sbjct: 181 MFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKD 240

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A   +  M  +  ++++VT+ VLI GLCK   V EA++    +   GL  +V  Y  
Sbjct: 241 FLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCT 300

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+    E    L DEM +    P   A + L+DG  K     +A  L  ++   G
Sbjct: 301 LVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFG 360

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y +L+  L + G L +A +L+  M    + P+ I    L+      G +D AI
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAI 420

Query: 241 ELQNEMMGRGL 251
              + M+  G+
Sbjct: 421 SYFDRMIQDGI 431



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 13/225 (5%)

Query: 21  CIESKFEDSKL---LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIE 77
           C+ S F DS       S +  N L  N V+ + + DA          + ++  M  + + 
Sbjct: 138 CVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDA----------VVIVKLMFANNLL 187

Query: 78  VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNL 137
             V T   L++GL K        + F    + G+ P+    +A++  +C+     RA+  
Sbjct: 188 PEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEK 247

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSR 197
              M           Y  LI G  K +   EA+ +K  +   G+  D+  Y +LV G  R
Sbjct: 248 IRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCR 307

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
               +    L  EM+  G  P E     L+    ++G +D+A EL
Sbjct: 308 LQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYEL 352



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 6/210 (2%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALS-LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           AN+++ T L+    +   P    S  LD     +   T+  F +L+     S  + +A+ 
Sbjct: 122 ANSLLHTLLL----RESHPKCVFSHFLDSYKRCKFSSTL-GFNLLVQNYVLSSRIFDAVV 176

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
               M    L P V   +AL++GL K         LFDE     + PD    +A++    
Sbjct: 177 IVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMC 236

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           + + F  A      M   G DL +  Y  L+ GL +   + EA  +   + G+G+  D +
Sbjct: 237 ELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVV 296

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              +L+         +  I+L +EM+  G 
Sbjct: 297 TYCTLVLGFCRLQQFEAGIQLMDEMVELGF 326


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 129/240 (53%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++  LC E +   +  LL +M+ +G+  + V   TL+     A +  +A+ LL EM 
Sbjct: 116 YTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMC 175

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S IE  VV +  L+ G CK+G        F  M   G+ P+V +YT LID LC++  ++
Sbjct: 176 ESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVK 235

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + D+M +R + P+   Y  LI+   K  S KEA++L+N M E GV LD   Y +L+
Sbjct: 236 KATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLI 295

Query: 193 WGLSRCGHLQEARVLFHEMI-GRGIL-PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GLS    + EA  L  EMI G  ++ P+ +   S++    + G M +A ++++ M   G
Sbjct: 296 TGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG 355



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 130/257 (50%), Gaps = 10/257 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  YGT+I GLC  +  + +  LL EM E+G+  N V+ + L+  Y KAG 
Sbjct: 139 MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGR 198

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 + +EM    IE  VV +  LID LC+ G V++A     +M + GL PNV  Y  
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT--E 178
           LI+ +CK+  ++ A +L + M ++ +  D   Y  LI G        EA+ L   M   E
Sbjct: 259 LINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGE 318

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG----ILPDEILCISLLKKHYERG 234
             V+ ++  + S++ GL + G +++A  +   M   G    ++   +L   LL+ H    
Sbjct: 319 TMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVH---- 374

Query: 235 NMDEAIELQNEMMGRGL 251
            + +A+EL +EM   GL
Sbjct: 375 KVKKAMELMDEMASSGL 391



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 118/235 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++  LC +    D+ L L  +  +      V  TTLM A        +A+ LL +M 
Sbjct: 81  YNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQ 140

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S +   VVT+  LI GLC +  V +A++    M + G+ PNV VY+ L+ G CK    E
Sbjct: 141 ASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWE 200

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               +F+EM  R + PD   YT LID   +    K+A  + ++M E G++ ++  Y  L+
Sbjct: 201 CVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLI 260

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             + + G ++EA  L + M+ +G+  D +   +L+        MDEA+ L  EM+
Sbjct: 261 NSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 1/251 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++  + ++I GLC   +   +  +   M ENG   N V    L+    +  +  +A+
Sbjct: 321 VEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAM 380

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+DEM  S +E    T+ +LI+G CK   V  A     +M   G+ P +  Y  L+  L
Sbjct: 381 ELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAAL 440

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C++  +E+ARN FDEM K   + D  AY+ +I G  +    K A      M + G+  D 
Sbjct: 441 CEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDS 499

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+ L+   +  G L  A  +  +M   G +PD  +  SL+K +  +G+ ++ +EL  E
Sbjct: 500 VTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIRE 559

Query: 246 MMGRGLLSGSK 256
           M  + +   SK
Sbjct: 560 MTAKDIALDSK 570



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 37/248 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ I+ D+ +Y  +I  LC E K + +  ++ +M E GL  N V    L+++  K G 
Sbjct: 209 MSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGS 268

Query: 61  PSEALSLLDEMLD-------------------------------------SRIEVTVVTF 83
             EA+SL + ML+                                     + +E  VVTF
Sbjct: 269 VKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTF 328

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             +I GLCK+G +R+A      M + G   N+  +  LI GL + + +++A  L DEM  
Sbjct: 329 NSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMAS 388

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
             + PD+  Y+ LI+G+ K      A +L ++M   G++ +L  Y  L+  L   G +++
Sbjct: 389 SGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQ 448

Query: 204 ARVLFHEM 211
           AR  F EM
Sbjct: 449 ARNFFDEM 456



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 3/226 (1%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
             +S  LLS +       + V   T++ A  + G   +A   L  ++      T V++  
Sbjct: 62  LPESPALLSSLPS---VRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTT 118

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+  LC      +A+     M   G+ P+V  Y  LI GLC    +++A  L  EM +  
Sbjct: 119 LMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESG 178

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+   Y+ L+ GY K   ++    +   M+  G++ D+  YT L+  L R G +++A 
Sbjct: 179 IEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKAT 238

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +  +M+ RG+ P+ +    L+    + G++ EA+ L+N M+ +G+
Sbjct: 239 QVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGV 284



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 5/196 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D   Y  +I G C   + + ++ LLS+M+ +G+    V    L+ A  + G 
Sbjct: 386 MASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGM 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +  DEM     ++ VV +  +I G C+    + A ++   M D GL P+   Y+ 
Sbjct: 446 MEQARNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSM 504

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+       +  A  +  +M     +PD   + +LI GY      ++ L L   MT   
Sbjct: 505 LINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKD 564

Query: 181 VDLD----LNAYTSLV 192
           + LD       YT LV
Sbjct: 565 IALDSKIISTIYTCLV 580


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 122/240 (50%), Gaps = 4/240 (1%)

Query: 16  IIWGLCIESKF-EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++ GLC   +  E   +L+  M E G T + V   TL+  +       EAL LL  M DS
Sbjct: 135 LLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADS 194

Query: 75  R---IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +       VV++ ++I+G    G V +A + F  M D G+ PNV  YT +IDGLCK   +
Sbjct: 195 QGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVV 254

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +RA  +F +M  + + PD   Y  LI GYL    +KE + +   M+  G+  D   Y SL
Sbjct: 255 DRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSL 314

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  L   G  +EAR LF  MI +GI P+  +   L+  +  +G + E  +L N M+  GL
Sbjct: 315 LNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGL 374



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 125/254 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK ++ +YG +I G   +    +   LL+ M ENGL+ +  I   +  AY K   
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAM 393

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + ++M    +   VV +  LID LCK G V +A+  F +M + G+ PN+ V+ +
Sbjct: 394 IDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNS 453

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC  +  E+A+  + EM  + + PD   +  ++          +A  L + M  VG
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               + +YT+L+ G    G + EA      M+  G+ PDE    +LL  +   G +D+A 
Sbjct: 514 TRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY 573

Query: 241 ELQNEMMGRGLLSG 254
            +  EM+  G+  G
Sbjct: 574 GVFREMLRNGITPG 587



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ ++  Y T+I GLC     + ++ +  +M + G+  +      L+  Y   G+
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + +L+EM    ++    T+  L++ LC +G  REA   F  M   G+ PNVA+Y  
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGI 348

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G   K  +    +L + M +  + PD   +  +   Y K     EA+++ N+M + G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y +L+  L + G + +A + F++M+  G+ P+  +  SL+         ++A 
Sbjct: 409 LSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAK 468

Query: 241 ELQNEMMGRGL 251
           E   EM+ +G+
Sbjct: 469 EFYFEMLNQGI 479



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 121/246 (49%), Gaps = 3/246 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKEN---GLTANTVICTTLMDAYFKAGEPSEAL 65
           D+  Y T++ G C E + E++  LL  M ++       N V    +++ +F  G+  +A 
Sbjct: 164 DVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAY 223

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM+D  I+  VVT+  +IDGLCK+ +V  A   F +M D G+ P+   Y  LI G 
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
                 +    + +EM    + PD   Y +L++    +   +EA  L + M   G+  ++
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNV 343

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ G +  G L E   L + M+  G+ PD  +   +   + ++  +DEA+ + N+
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403

Query: 246 MMGRGL 251
           M  +GL
Sbjct: 404 MKQQGL 409



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 119/254 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K D   Y  +I G     K+++   +L EM  +GL  +     +L++     G 
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D M+   I+  V  + +LI G    G + E  D    M + GL P+  ++  
Sbjct: 324 CREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +     KK  I+ A ++F++M ++ + PD   Y ALID   K     +A+   N+M   G
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEG 443

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  + SLV+GL      ++A+  + EM+ +GI PD +   ++L     +G + +A 
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQ 503

Query: 241 ELQNEMMGRGLLSG 254
            L + M   G   G
Sbjct: 504 RLIDLMERVGTRPG 517



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 115/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K D   YG+++  LC   +  +++ L   M   G+  N  I   L+  Y   G 
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGA 358

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SE   LL+ M+++ +      F ++     K  ++ EA+  F +M   GL P+V  Y A
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGA 418

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++ A   F++M    + P+   + +L+ G    + +++A      M   G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  + +++  L   G + +A+ L   M   G  P  I   +L+  H   G +DEA 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAA 538

Query: 241 ELQNEMMGRGL 251
           +  + M+  GL
Sbjct: 539 KSLDVMLSVGL 549



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 109/227 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C+  + +++   L  M   GL  +     TL+  Y +AG   +A  +  EML
Sbjct: 521 YTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREML 580

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + I   VVT+  ++ GL  +    EA + +  M   G   N+ +Y  +++GL K NC++
Sbjct: 581 RNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVD 640

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF  +  +D   + T +  +I    K    ++A++L   ++  G+  D+  Y  + 
Sbjct: 641 EAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIA 700

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             L   G+L+E   LF  M   G  P+  +  +L+++   RG++  A
Sbjct: 701 ENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 111/252 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++ ++ ++++GLC   K+E +K    EM   G+  + V   T++      G+
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+D M        V+++  LI G C  G + EA      M   GL P+   Y  
Sbjct: 499 VMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+   I+ A  +F EM +  + P    Y+ ++ G      F EA  L   M   G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y  ++ GLS+   + EA  LF  +  +    +      ++   ++ G  ++A+
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAM 678

Query: 241 ELQNEMMGRGLL 252
            L   +   GL+
Sbjct: 679 HLFATISSYGLV 690



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 95/215 (44%), Gaps = 4/215 (1%)

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           +T +    + L+  + + G      +    +L S   V  +    L+ GLC +  + EA+
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 101 DYF-GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK---RDMIPDTTAYTAL 156
           D    RMP+ G  P+V  Y  L+ G C +   E A  L   M     R   P+  +Y  +
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           I+G+       +A NL   M + G+  ++  YT+++ GL +   +  A  +F +MI +G+
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            PD      L+  +   G   E + +  EM   GL
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGL 304



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 111/256 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D+  + TI+  LC + +   ++ L+  M+  G     +  TTL+  +   G 
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGR 533

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   LD ML   ++    T+  L+ G C++G + +A   F  M   G+ P V  Y+ 
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GL        A+ L+  M       +   Y  +++G  K+    EA  L   +    
Sbjct: 594 ILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKD 653

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             L++  +  ++  L + G  ++A  LF  +   G++PD      + +   E G ++E  
Sbjct: 654 FQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFD 713

Query: 241 ELQNEMMGRGLLSGSK 256
           +L + M   G    S+
Sbjct: 714 DLFSAMEKSGTTPNSR 729



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 86/199 (43%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D   Y T++ G C   + +D+  +  EM  NG+T   V  +T++   F     SEA 
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L   M+ S  +  +  + ++++GL K+  V EA   F  +        +  +  +I  L
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGAL 668

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K    E A +LF  +    ++PD   Y  + +  ++    +E  +L + M + G   + 
Sbjct: 669 FKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNS 728

Query: 186 NAYTSLVWGLSRCGHLQEA 204
               +LV  L   G +  A
Sbjct: 729 RMLNALVRRLLHRGDITRA 747


>gi|341606823|gb|AEK83514.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 208

 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 5   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 65  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEEEE 184

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 185 GCDQTVYTYTILISGMFK 202



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 88/180 (48%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++  
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 120

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G ++EA+ L   M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 180



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 180



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 2   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 62  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 121

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 122 YSSLIDGLGKAGRIDEAERLFEEMSEKG 149


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  130 bits (326), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 134/250 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ DL  +  +I   C   +   +  +L +M + G   + V   +L++ + +    S+A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL+D+M++   +  +V +  +ID LCK+  V +A D+F  +   G+ PNV  YTAL++GL
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  +    A  L  +M K+ + P+   Y+AL+D ++K+    EA  L   M  + +D D+
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+SLV GL     + EA  +F  M+ +G L D +   +L+    +   +++ ++L  E
Sbjct: 296 VTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 246 MMGRGLLSGS 255
           M  RGL+S +
Sbjct: 356 MSQRGLVSNT 365



 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 130/248 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ ++  Y  ++ GLC  S++ D+  LLS+M +  +T N +  + L+DA+ K G+  E
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L +EM+   I+  +VT+  L++GLC    + EA   F  M   G   +V  Y  LI+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +E    LF EM +R ++ +T  Y  LI G+ +     +A    ++M   G+  
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y  L+ GL   G L++A V+F +M  R +  D +   ++++   + G ++EA  L 
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458

Query: 244 NEMMGRGL 251
             +  +GL
Sbjct: 459 CSLSLKGL 466



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 123/243 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D+  Y  II  LC   +  D+     E++  G+  N V  T L++    +   S+A  
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M+  +I   V+T+  L+D   K+G V EA + F  M    + P++  Y++L++GLC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLC 306

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
             + I+ A  +FD M  +  + D  +Y  LI+G+ K +  ++ + L   M++ G+  +  
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +L+ G  + G + +A+  F +M   GI PD      LL    + G +++A+ +  +M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426

Query: 247 MGR 249
             R
Sbjct: 427 QKR 429



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 119/233 (51%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G+++ G C  ++  D+  L+ +M E G   + V    ++D+  K    ++A     E+  
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             I   VVT+  L++GLC S    +A      M    + PNV  Y+AL+D   K   +  
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A+ LF+EM +  + PD   Y++L++G   H+   EA  + + M   G   D+ +Y +L+ 
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           G  +   +++   LF EM  RG++ + +   +L++  ++ G++D+A E  ++M
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 114/216 (52%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +I  D+  Y +++ GLC+  + +++  +   M   G  A+ V   TL++ + KA    + 
Sbjct: 290 SIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + L  EM    +    VT+  LI G  ++G V +A ++F +M  FG+ P++  Y  L+ G
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC    +E+A  +F++M KR+M  D   YT +I G  K    +EA +L   ++  G+  D
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  YT+++ GL   G L E   L+ +M   G++ ++
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 8/208 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K   AD+  Y T+I G C   + ED   L  EM + GL +NTV   TL+  +F+AG+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A     +M    I   + T+ +L+ GLC +G + +A+  F  M    +  ++  YT 
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G+CK   +E A +LF  +  + + PD   YT ++ G        E   L  +M + G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500

Query: 181 V--------DLDLNAYTSLVWGLSRCGH 200
           +        D D+     L+  +  CG+
Sbjct: 501 LMKNDCTLSDGDITLSAELIKKMLSCGY 528



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 105/223 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  D+  L S+M ++    + V    L+ A  K  +    +SL  +M    I   + TF 
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           ++I+  C    V  A+   G+M   G  P+     +L++G C++N +  A +L D+M + 
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PD  AY A+ID   K +   +A +    +   G+  ++  YT+LV GL       +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L  +MI + I P+ I   +LL    + G + EA EL  EM+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 118/248 (47%), Gaps = 1/248 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEPSEA 64
           ++ D+  Y T+I GLC   + E+   L+  M+       NTV    L+D Y KA     A
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAA 435

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             L D+M    +   VVT   L+DG+CK G +  A+++F  M   GL  N   YTALI  
Sbjct: 436 RELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRA 495

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            C  N IE+A  LFDEM +    PD   Y  LI G  +      A  + ++M E G   D
Sbjct: 496 FCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPD 555

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           + ++  L+ G  R   L EA  +  EM   GI PD +   +L+    + G+   A  L  
Sbjct: 556 IVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615

Query: 245 EMMGRGLL 252
           +M+  GL+
Sbjct: 616 KMVKEGLV 623



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++    T++ G+C   +   +    +EM+  GL  N V  T L+ A+     
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L DEML++      + +  LI GL ++G +  A     +M + G  P++  +  
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+KN ++ A  +  EM    + PD   Y  LI  + K   F  A  L  +M + G
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEA 239
           +   +  Y +L+      G+L EA  +F +M     +P   +  ++L     R N +D A
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA 681

Query: 240 IELQNEMMGRGL 251
           + L ++M  +G+
Sbjct: 682 LSLMDDMKVKGV 693



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 6/241 (2%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I  LC   + + +  +L  + + G       C  L+ A  +A E     +LL EM +  
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMD 335

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-----PDFGLHPNVAVYTALIDGLCKKNC 130
           I+  VVTF +LI+ LCK   V EA++ F +M       F + P+V  Y  LIDGLCK   
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGR 395

Query: 131 IERARNLFDEMPKRDM-IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            E    L + M  +   +P+T  Y  LIDGY K    + A  L ++M + GV  ++    
Sbjct: 396 QEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLN 455

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +LV G+ + G +  A   F+EM G+G+  + +   +L++      N+++A+EL +EM+  
Sbjct: 456 TLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA 515

Query: 250 G 250
           G
Sbjct: 516 G 516



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 1/200 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      D+  +  +I G C ++K +++  +L EM+  G+  + V   TL+  + K G+
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYT 119
            S A  L+ +M+   +  TVVT+  LI   C +G + EA+  F  M     + PN  +Y 
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LI+ LC+KN ++ A +L D+M  + + P+T  + A+  G  +     +A  L +RMTE 
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726

Query: 180 GVDLDLNAYTSLVWGLSRCG 199
             + D      L   LS  G
Sbjct: 727 ACNPDYITMEILTEWLSAVG 746



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 42/260 (16%)

Query: 34  SEMKENGLTANTVICT-TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           +E   N  T + V    +  D   +A +  E + L+ +  +  +    +    LI  LC+
Sbjct: 223 AEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCR 282

Query: 93  SGLVREAIDY----------------------FGR-------------MPDFGLHPNVAV 117
           SG    A D                        GR             M +  + PNV  
Sbjct: 283 SGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVT 342

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRD-----MIPDTTAYTALIDGYLKHESFKEALNL 172
           +  LI+ LCK   ++ A  +F++M   +     + PD   Y  LIDG  K    +E L L
Sbjct: 343 FGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGL 402

Query: 173 KNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
             RM ++     +   Y  L+ G  +   ++ AR LF +M   G+ P+ +   +L+    
Sbjct: 403 VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMC 462

Query: 232 ERGNMDEAIELQNEMMGRGL 251
           + G ++ A+E  NEM G+GL
Sbjct: 463 KHGRINGAVEFFNEMQGKGL 482


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 122/254 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++  +  + T+I G+C     + ++ L   M E G+T +      L+    + G 
Sbjct: 266 MQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGR 325

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + ++M    ++   V F +LID  CK G     ++    M + G+ P+   Y A
Sbjct: 326 IEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNA 385

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLC+   ++ A  +  EM    + PDT  YT LIDGY K E    A+ +K  M   G
Sbjct: 386 IVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEG 445

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V LD   YT+L+ GLS+ G   +A  +  EM+  G+ PD      ++     +G++   +
Sbjct: 446 VGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGL 505

Query: 241 ELQNEMMGRGLLSG 254
            L  EM  +G   G
Sbjct: 506 RLLKEMQNKGRKPG 519



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 112/217 (51%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           ++ + GL     +   LM    + GE + A ++ DEM    +  TVV+F  +I G+C++G
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            +  A     RM + G+ P+V  Y ALI GLC+   IE AR +F++M  R M P+   +T
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LID + K    +  L L   M E GV  D   Y ++V GL R   L+ A  +  EM   
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G+ PD +   +L+  + +   +D A+E++  M+  G+
Sbjct: 410 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGV 446



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 117/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  YG +I GLC   + ED++ +  +M   G+  N V+ T L+DA+ K G+
Sbjct: 301 MSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGD 360

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L L  EM +  +    VT+  +++GLC++  ++ A      M   GL P+   YT 
Sbjct: 361 AETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTT 420

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  ++ A  +   M    +  D   YTALI G  K     +A  +   M E G
Sbjct: 421 LIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAG 480

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   YT ++    R G ++    L  EM  +G  P  +    ++    + G M  A 
Sbjct: 481 LEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNAD 540

Query: 241 ELQNEMMGRGL 251
            L N M+  G+
Sbjct: 541 MLLNAMINIGV 551



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 3/219 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ D   Y  I+ GLC     + +  ++ EM+  GL  +TV  TTL+D Y K  E
Sbjct: 371 MRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEE 430

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +   M+   + +  VT+  LI GL K+G   +A    G M + GL P+   YT 
Sbjct: 431 LDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTM 490

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  C+K  ++    L  EM  +   P    Y  +++G+ K    K A  L N M  +G
Sbjct: 491 VIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIG 550

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  D   Y  L+ G  + G + +   L      +G +PD
Sbjct: 551 VSPDDITYNILLDGHCKHGKVTDIEELKS---AKGTVPD 586



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 84/154 (54%)

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           EA  ++ ++ D GL P   ++  L+  L +   +  A+N+FDEM  R +     ++  +I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G  +      A  L  RM+E GV  D+  Y +L+ GL R G +++AR +F +M GRG+ 
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P+ ++   L+  H ++G+ +  +EL  EM  RG+
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGV 376



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 3/214 (1%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
             G+      CT LM  +  A    EA +   ++LD+ +      F VL+  L + G + 
Sbjct: 201 RRGIRLEPTSCTGLMSRFPTA---PEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELA 257

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            A + F  M   G+   V  +  +I G+C+   ++ A  L   M +  + PD   Y ALI
Sbjct: 258 SAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALI 317

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G  +    ++A  +  +M   G+  +   +T L+    + G  +    L  EM  RG+ 
Sbjct: 318 QGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVR 377

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           PD +   +++       ++  A  +  EM   GL
Sbjct: 378 PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGL 411


>gi|341606827|gb|AEK83516.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 207

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 5   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 65  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEEEE 184

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 185 GCDQTVYTYTILISGMFK 202



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 88/180 (48%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++  
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 120

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G ++EA+ L   M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 180



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 180



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 2   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 62  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 121

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 122 YSSLIDGLGKAGRIDEAERLFEEMSEKG 149


>gi|341606821|gb|AEK83513.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 205

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 5   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 65  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEEEE 184

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 185 GCDQTVYTYTILISGMFK 202



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 88/180 (48%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++  
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 120

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G ++EA+ L   M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 180



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 180



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 2   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 62  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 121

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 122 YSSLIDGLGKAGRIDEAERLFEEMSEKG 149


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 122/240 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y TII  LC + +  ++  + S MK  G++ N     +L+          EA +
Sbjct: 42  QPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASA 101

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L+EM+   I   +VTF +LI+  CK G V EA      M + G+ PNV  Y++L++G  
Sbjct: 102 MLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYS 161

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            +  +  AR LFD M  +   PD  +Y  LI+GY K +   EA  L N M   G+  D+ 
Sbjct: 162 LQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV 221

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +Y +L+ GL + G L+EA  LF  M+  G LPD      LL    ++G + +A  L   M
Sbjct: 222 SYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 281



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 129/257 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  ++  Y ++I GLC  S++ ++  +L+EM    +  N V  + L++ + K G 
Sbjct: 71  MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 130

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L  M +  +E  VVT+  L++G      V EA   F  M   G  P+V  Y  
Sbjct: 131 VFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNI 190

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   I  A+ LF+EM  + + PD  +Y  LIDG  +    +EA +L   M   G
Sbjct: 191 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 250

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y+ L+ G  + G+L +A  LF  M    + P+ ++   L+    +  N+ EA 
Sbjct: 251 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEAR 310

Query: 241 ELQNEMMGRGLLSGSKN 257
           +L +E+  +GL    K+
Sbjct: 311 KLFSELFVQGLQPNMKH 327



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 113/216 (52%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M   G   +    TT+++   K GE   A  L  +M ++  +  VVT+  +ID LCK   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           V EA+D F  M   G+ PN+  Y +LI GLC  +    A  + +EM   +++P+   ++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI+ + K  +  EA  +   MTE+GV+ ++  Y+SL+ G S    + EAR LF  MI +G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             PD      L+  + +   + EA +L NEM+ +GL
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 216



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 119/250 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + D+  Y TII GLC   +   +  L  +M E G   + V  +T++D+  K   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL +   M    I   + T+  LI GLC     REA      M    + PN+  ++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  CK+  +  AR +   M +  + P+   Y++L++GY       EA  L + M   G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ +Y  L+ G  +   + EA+ LF+EMI +G+ PD +   +L+    + G + EA 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 241 ELQNEMMGRG 250
           +L   M+  G
Sbjct: 241 DLFKNMLTNG 250


>gi|341606825|gb|AEK83515.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 206

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 4   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 63

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 64  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 123

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 124 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEEEE 183

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 184 GCDQTVYTYTILISGMFK 201



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 87/177 (49%)

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  K  
Sbjct: 3   EMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSG 62

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++   Y+
Sbjct: 63  SVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYS 122

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           SL+ GL + G + EA  LF EM  +G   D     +L+    + G ++EA+ L   M
Sbjct: 123 SLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 179



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 88/178 (49%)

Query: 34  SEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS 93
            EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  KS
Sbjct: 2   QEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKS 61

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++  Y
Sbjct: 62  GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFY 121

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           ++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 122 SSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRM 179



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 1   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 60

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 61  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 120

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 121 YSSLIDGLGKAGRIDEAERLFEEMSEKG 148


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 127/247 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  DL  Y  +I  LC  S+F  +  ++ +M + G   + V  ++L++ + +      A+
Sbjct: 100 IGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAV 159

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ +M + R ++ VV +  +IDG CK+GLV  A+  FGRM   G+  +   Y +L+ GL
Sbjct: 160 DLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGL 219

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  L  +M  RD++P+   +TALI+ +++   F EA      M    +D D+
Sbjct: 220 CCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDV 279

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y S++ GL   G + EA+ +   M+ +G  PD +   +L+    +   +DE  +L  E
Sbjct: 280 FTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVRE 339

Query: 246 MMGRGLL 252
           M  RGL+
Sbjct: 340 MSQRGLV 346



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 104/214 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    K D+ +Y TII G C      ++ +L   M+ +G+ A+TV   +L+     +G 
Sbjct: 165 MEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGR 224

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L+ +M+   I   V+TF  LI+   + G   EA  ++  M    + P+V  Y +
Sbjct: 225 RSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNS 284

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLC    ++ A+ + D M  +   PD   Y  LI+G+ K +   E   L   M++ G
Sbjct: 285 MIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRG 344

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           + +D   + +++ G  + G    A+ +F  M  R
Sbjct: 345 LVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR 378



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 3/218 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y ++I GLC+  + +++K +L  M   G   + V   TL++ + K   
Sbjct: 270 MIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKR 329

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L+ EM    + V  VTF  +I G  ++G    A + F RM   G  PN+  Y+ 
Sbjct: 330 VDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSI 386

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    +E+A  LF+ M K +M  D T Y  +I G     + ++A +L   ++  G
Sbjct: 387 LLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKG 446

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           ++ D+  YT+++ G  R     +A  L+ +M   G+LP
Sbjct: 447 LEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 5/238 (2%)

Query: 17  IWGLCIESK-----FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            WG    +K      +++  L   M ++    + V  + L+    K+      +SL   M
Sbjct: 36  FWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNM 95

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               I   + T+ ++I+ LC+      A+   G+M  FG  P+V   ++LI+G C+ N +
Sbjct: 96  EICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A +L  +M +     D   Y  +IDG+ K      AL L  RM   GV  D   Y SL
Sbjct: 156 FGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSL 215

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           V GL   G   +A  L  +M+ R I+P+ I   +L+      G   EA +   EM+ R
Sbjct: 216 VTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRR 273



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 124/287 (43%), Gaps = 38/287 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++AD   Y +++ GLC   +  D+  L+ +M    +  N +  T L++A+ + G+
Sbjct: 200 MERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGK 259

Query: 61  PSEALSLLDEMLDSRIE-----------------------------VT------VVTFCV 85
             EA    +EM+   I+                             VT      VVT+  
Sbjct: 260 FLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNT 319

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+G CK+  V E       M   GL  +   +  +I G  +    + A+ +F  M  R 
Sbjct: 320 LINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSR- 378

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   Y+ L+ G   +   ++AL L   M +  ++LD+  Y  ++ G+   G++++A 
Sbjct: 379 --PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAW 436

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            LF  +  +G+ PD +   +++     +   D+A  L  +M   GLL
Sbjct: 437 DLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLL 483



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 90/190 (47%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA+ L   M+ SR   ++V F  L+  + KS      I  F  M   G+  ++  Y  +I
Sbjct: 52  EAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVI 111

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC+ +    A ++  +M K    PD    ++LI+G+ +      A++L ++M E+   
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCK 171

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD+  Y +++ G  + G +  A VLF  M   G+  D +   SL+      G   +A  L
Sbjct: 172 LDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARL 231

Query: 243 QNEMMGRGLL 252
             +M+ R ++
Sbjct: 232 MRDMVMRDIV 241


>gi|399107204|gb|AFP20366.1| At1g03560-like protein, partial [Capsella grandiflora]
 gi|399107210|gb|AFP20369.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 70  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 124 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  +   
Sbjct: 67  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 126/235 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C +   + +  + S+M    L  N V  + L+D  FK G+  +AL L D+ML
Sbjct: 467 YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 526

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  T  TF  +I+GLCK G + EA D      + G  P+   Y +++DG  K+  I+
Sbjct: 527 SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNID 586

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  ++ EM +  + P+   YT+LI+G+ K      AL  ++ M E G++LD+ AY++L+
Sbjct: 587 SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 646

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            G  +   ++ A+ LF E++  G+ P+ I+  S++    +  NM+ A+    +M+
Sbjct: 647 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 701



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 133/275 (48%), Gaps = 35/275 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + TII GLC   +  +++  L    E G   + +   +++D + K G    AL++  EM 
Sbjct: 537 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 596

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   VVT+  LI+G CKS  +  A+     M + GL  +V  Y+ALIDG CK+  +E
Sbjct: 597 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 656

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A++LF E+ +  + P+   Y ++I G+    + + AL    +M    +  DL  YT+L+
Sbjct: 657 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 716

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEI--------LC--------------------- 223
            GL + G L  A  L+ EM+ +GI+PD I        LC                     
Sbjct: 717 DGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 776

Query: 224 ------ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                  +L+  ++  GN+ EA  L +EM+ RGL+
Sbjct: 777 PSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 811



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 1/250 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K + +K D   Y  II  +C +        LL EMKE G   +    T+++ A    G  
Sbjct: 247 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 306

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EAL L +EM++    + +V    L+ G C  G +  A++ F ++ + GL PN   Y+ L
Sbjct: 307 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 366

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+G C    IE+A  L+ +M    + P      +L+ GYLK   ++EA  L +   + GV
Sbjct: 367 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 426

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++  Y  ++  L + G + EA  L   M+ +G++P+ +    ++  H  +GNMD A  
Sbjct: 427 -ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASS 485

Query: 242 LQNEMMGRGL 251
           + ++M+ R L
Sbjct: 486 VFSDMLARDL 495



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 7/207 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K ++ D+  Y  +I G C     E ++ L  E+ E GL+ N ++  +++  +     
Sbjct: 630 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 689

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL    +M++ RI   + T+  LIDGL K G +  A D +  M   G+ P++  +  
Sbjct: 690 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 749

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GLC K  +E AR + +EM +++M P    Y  LI GY +  + KEA  L + M + G
Sbjct: 750 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 809

Query: 181 VDLDLNAYTSLVWG-------LSRCGH 200
           +  D   Y  L+ G       LSR  H
Sbjct: 810 LVPDDVTYDILINGKFKGDRSLSRPSH 836



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 35/244 (14%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +I+ G   E   + +  +  EM E G++ N V  T+L++ + K+     AL   DEM 
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------------------ 114
           +  +E+ V  +  LIDG CK   +  A D F  + + GL PN                  
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 691

Query: 115 -----------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                            +  YT LIDGL K+  +  A +L+ EM  + ++PD   +  L+
Sbjct: 692 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 751

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +G       + A  +   M    +   +  Y +L+ G  R G+L+EA  L  EM+ RG++
Sbjct: 752 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 811

Query: 218 PDEI 221
           PD++
Sbjct: 812 PDDV 815



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 122/308 (39%), Gaps = 69/308 (22%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + ++I     +    ++  L  EM   G   N V+ T+LM  Y   G    AL+L +++ 
Sbjct: 293 FTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT 352

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP------------------- 113
           +  +    VT+ VLI+G C SG + +A + + +M   G+ P                   
Sbjct: 353 EDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWE 412

Query: 114 ---------------NVAVYTALIDGLCK------------------------------- 127
                          N+  Y  ++  LCK                               
Sbjct: 413 EASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMIL 472

Query: 128 ----KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
               K  ++ A ++F +M  RD+ P+   Y+ LIDG  K    ++AL+L ++M  + +  
Sbjct: 473 GHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAP 532

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
               + +++ GL + G + EAR      +  G +P  +   S++    + GN+D A+ + 
Sbjct: 533 TDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVY 592

Query: 244 NEMMGRGL 251
            EM   G+
Sbjct: 593 REMCEFGV 600



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 95/201 (47%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+ A  +     E   L ++M+   I     T  V++    K G V EA +YF    + G
Sbjct: 191 LLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERG 250

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           +  +   Y+ +I  +CKK        L +EM +R  +P    +T++I   +   +  EAL
Sbjct: 251 VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEAL 310

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            LK  M   G  ++L   TSL+ G    G+L  A  LF+++   G+ P+++    L++  
Sbjct: 311 RLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGC 370

Query: 231 YERGNMDEAIELQNEMMGRGL 251
              GN+++A EL  +M   G+
Sbjct: 371 CNSGNIEKASELYTQMKLNGI 391



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 91/202 (45%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L++AY +A     A+   + M+   +   V    +L+  L +  ++ E  D + +M   G
Sbjct: 156 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 215

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           ++ +      ++    K+  +E A   F E  +R +  D  AY+ +I    K  +    L
Sbjct: 216 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 275

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   M E G       +TS++      G++ EA  L  EMI  G   + ++  SL+K +
Sbjct: 276 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 335

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
             +GN+D A+ L N++   GL 
Sbjct: 336 CAQGNLDSALNLFNKITEDGLF 357



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 108/242 (44%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           +P    ++  L   +   + + L ++M   G+  +      ++ A  K G   EA     
Sbjct: 185 VPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFR 244

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           E  +  +++    + ++I  +CK       ++    M + G  P+ A +T++I     + 
Sbjct: 245 ETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 304

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +  A  L +EM       +    T+L+ GY    +   ALNL N++TE G+  +   Y+
Sbjct: 305 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 364

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+ G    G++++A  L+ +M   GI P      SLL+ + +    +EA +L +E +  
Sbjct: 365 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDC 424

Query: 250 GL 251
           G+
Sbjct: 425 GV 426



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 4/204 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSR----IEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           L++ Y         +  +D +++       E+    F  L++   ++  +  AID F  M
Sbjct: 117 LLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAM 176

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
               + P V     L+  L ++N I   R+L+++M  R +  D      ++   LK    
Sbjct: 177 ICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRV 236

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           +EA        E GV LD  AY+ ++  + +  +      L  EM  RG +P E    S+
Sbjct: 237 EEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSV 296

Query: 227 LKKHYERGNMDEAIELQNEMMGRG 250
           +     +GNM EA+ L+ EM+  G
Sbjct: 297 IVACVAQGNMVEALRLKEEMINCG 320


>gi|341605685|gb|AEK82945.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMXLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M       D   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +BEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMXLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G   +V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMXLFKRM 183



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKXDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 122/240 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y TII  LC + +  ++  + S MK  G++ N     +L+          EA +
Sbjct: 259 QPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASA 318

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L+EM+   I   +VTF +LI+  CK G V EA      M + G+ PNV  Y++L++G  
Sbjct: 319 MLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYS 378

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            +  +  AR LFD M  +   PD  +Y  LI+GY K +   EA  L N M   G+  D+ 
Sbjct: 379 LQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV 438

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +Y +L+ GL + G L+EA  LF  M+  G LPD      LL    ++G + +A  L   M
Sbjct: 439 SYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 498



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 125/239 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GLC   KF  +  L  +M   G   +    TT+++   K GE   A  L  +M 
Sbjct: 195 FNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMG 254

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++  +  VVT+  +ID LCK   V EA+D F  M   G+ PN+  Y +LI GLC  +   
Sbjct: 255 EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR 314

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + +EM   +++P+   ++ LI+ + K  +  EA  +   MTE+GV+ ++  Y+SL+
Sbjct: 315 EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G S    + EAR LF  MI +G  PD      L+  + +   + EA +L NEM+ +GL
Sbjct: 375 NGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 433



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  ++  Y ++I GLC  S++ ++  +L+EM    +  N V  + L++ + K G 
Sbjct: 288 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 347

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L  M +  +E  VVT+  L++G      V EA   F  M   G  P+V  Y  
Sbjct: 348 VFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNI 407

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   I  A+ LF+EM  + + PD  +Y  LIDG  +    +EA +L   M   G
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y+ L+ G  + G+L +A  LF  M    + P+ ++   L+    +  N+ EA 
Sbjct: 468 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEAR 527

Query: 241 ELQNEMMGRGL 251
           +L +E+  +GL
Sbjct: 528 KLFSELFVQGL 538



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 120/241 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   NI  ++  +  +I   C E    +++ +L  M E G+  N V  ++LM+ Y    E
Sbjct: 323 MMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAE 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D M+    +  V ++ +LI+G CK+  + EA   F  M   GL P++  Y  
Sbjct: 383 VVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 442

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC+   +  A +LF  M     +PD   Y+ L+DG+ K     +A  L   M    
Sbjct: 443 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 502

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y  L+  + +  +L+EAR LF E+  +G+ P+  +  +++    + G +DEA+
Sbjct: 503 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEAL 562

Query: 241 E 241
           E
Sbjct: 563 E 563



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 124/248 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++  Y +++ G  ++++  +++ L   M   G   +      L++ Y KA    EA 
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +EM+   +   +V++  LIDGLC+ G +REA D F  M   G  P++  Y+ L+DG 
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  + +A  LF  M    + P+   Y  LID   K  + KEA  L + +   G+  ++
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNV 542

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+++ GL + G L EA   F  M   G  P+E     +++   +  +   A++L  E
Sbjct: 543 QIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGE 602

Query: 246 MMGRGLLS 253
           M  +G ++
Sbjct: 603 MREKGFVA 610



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 113/215 (52%), Gaps = 1/215 (0%)

Query: 26  FEDSKLLLS-EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + D+ + LS +M+  GL+ +T     L++ +F+        S+L +++   +++T+VTF 
Sbjct: 137 YHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFN 196

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            LI+GLCK G   +A++ F  M   G  P+V  YT +I+GLCK      A  LF +M + 
Sbjct: 197 TLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEA 256

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PD   Y+ +ID   K     EAL++ + M   G+  ++  Y SL+ GL      +EA
Sbjct: 257 GCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREA 316

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             + +EM+   I+P+ +    L+    + GN+ EA
Sbjct: 317 SAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEA 351



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 106/221 (47%), Gaps = 4/221 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  Y  +I G C   +  ++K L +EM   GLT + V   TL+D   + G 
Sbjct: 393 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGR 452

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L   ML +     + T+ +L+DG CK G + +A   F  M    L PN+ +Y  
Sbjct: 453 LREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNI 512

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID +CK   ++ AR LF E+  + + P+   YT +I+G  K     EAL     M E G
Sbjct: 513 LIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARV--LFHEMIGRGILPD 219
              +  +Y  ++ G  +  H  E+R   L  EM  +G + D
Sbjct: 573 CPPNEFSYNVIIRGFLQ--HKDESRAVQLIGEMREKGFVAD 611



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 94/185 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y T+I GLC   +  ++  L   M  NG   +    + L+D + K G 
Sbjct: 428 MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGY 487

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L   M  + ++  +V + +LID +CKS  ++EA   F  +   GL PNV +YT 
Sbjct: 488 LAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTT 547

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK+  ++ A   F  M +    P+  +Y  +I G+L+H+    A+ L   M E G
Sbjct: 548 IINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKG 607

Query: 181 VDLDL 185
              D+
Sbjct: 608 FVADV 612



 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 83/188 (44%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +SL  +M  + +     T  +LI+   +   V        ++   GL   +  +  LI+G
Sbjct: 142 ISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLING 201

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK     +A  LFD+M  R   PD   YT +I+G  K      A  L  +M E G   D
Sbjct: 202 LCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPD 261

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y++++  L +   + EA  +F  M  +GI P+     SL++         EA  + N
Sbjct: 262 VVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLN 321

Query: 245 EMMGRGLL 252
           EMM   ++
Sbjct: 322 EMMSLNIM 329



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 37/154 (24%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K ++ +Y  +I  +C     ++++ L SE+   GL  N  I TT          
Sbjct: 498 MQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTT---------- 547

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                                    +I+GLCK GL+ EA++ F  M + G  PN   Y  
Sbjct: 548 -------------------------IINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNV 582

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD--TTA 152
           +I G  +     RA  L  EM ++  + D  TTA
Sbjct: 583 IIRGFLQHKDESRAVQLIGEMREKGFVADVATTA 616


>gi|341605777|gb|AEK82991.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605779|gb|AEK82992.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605809|gb|AEK83007.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605811|gb|AEK83008.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L + G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRM 183



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  +   
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 121/240 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C +     +  LLS+M E+ LT + V   +L+    K G    A  LL+ M 
Sbjct: 182 YNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMN 241

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ +     T+ V ID LCK G + EA   F  + + G+  N  +YTALIDG CK   ++
Sbjct: 242 ENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMD 301

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L D M   D +P+++ Y ALIDG  K    +EAL L   M + G+   +  YT L+
Sbjct: 302 DANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILI 361

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             + + G    A  +  +M+  G  PD  +  + +     RGN+ EA ++ + M  RG++
Sbjct: 362 VAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM 421



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 118/243 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+  L    +  ++  L SEM+E G   N    T +++A  K  +  E   +LDEM+
Sbjct: 77  YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +  +V T+  LIDG CK G+V  A +    M     +PN   Y  LI G C+K  + 
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  L  +M +  + P    Y +LI G  K      A  L N M E GV  D   Y+  +
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L + G ++EA VLF+ +  +GI  +E++  +L+  + + G MD+A  L + M+    L
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL 316

Query: 253 SGS 255
             S
Sbjct: 317 PNS 319



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + +   Y  +I GLC   + ++   +  +M+E+         T ++ A F++G 
Sbjct: 30  MPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGR 89

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L  EM +   E  + T+ V+I+ +CK   + E       M + GL P+V  Y A
Sbjct: 90  RMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNA 149

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A+ + D M      P+   Y  LI G+ + ++   A+ L ++M E  
Sbjct: 150 LIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESR 209

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y SL+ G  + G+L  A  L + M   G++PD+      +    ++G ++EA 
Sbjct: 210 LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEAN 269

Query: 241 ELQNEMMGRGL 251
            L N +  +G+
Sbjct: 270 VLFNSLKEKGI 280



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +  + ++  Y  +I  +C E+K E+ + +L EM E GL  +      L+D Y K G 
Sbjct: 100 MRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGM 159

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +LD M  +       T+  LI G C+   V  A+    +M +  L P+V  Y +
Sbjct: 160 VEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNS 219

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++ A  L + M +  ++PD   Y+  ID   K    +EA  L N + E G
Sbjct: 220 LIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKG 279

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+L+ G  + G + +A  L   M+    LP+     +L+    +   + EA+
Sbjct: 280 IKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEAL 339

Query: 241 ELQNEMMGRGL 251
            L   M+ +GL
Sbjct: 340 LLMESMIQKGL 350



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 102/218 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   Y   I  LC + + E++ +L + +KE G+ AN VI T L+D Y KAG+
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A SLLD ML         T+  LIDGLCK   V+EA+     M   GL   V  YT 
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  + K+   + A  + D+M      PD   YTA I  +    + KEA ++ + M E G
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG 419

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           V  D   YT ++      G L  A  +   M   G  P
Sbjct: 420 VMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDP 457



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 112/238 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C     + +  LL+ M ENG+  +    +  +D   K G   EA  L + + 
Sbjct: 217 YNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLK 276

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I+   V +  LIDG CK+G + +A     RM      PN + Y ALIDGLCK+  ++
Sbjct: 277 EKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQ 336

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L + M ++ +      YT LI   LK   F  A  + ++M   G   D+  YT+ +
Sbjct: 337 EALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFI 396

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
                 G+++EA  +   M  RG++PD +    ++  +   G ++ A ++   M   G
Sbjct: 397 HAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTG 454



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 104/217 (47%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M + G   N V  T L+    + G   E +++  +M +     TV T+ V++  L +SG 
Sbjct: 30  MPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGR 89

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
             EAI+ F  M + G  PN+  YT +I+ +CK+  +E  R + DEM ++ ++P    Y A
Sbjct: 90  RMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNA 149

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LIDGY K    + A  + + M     + +   Y  L+ G  R  ++  A  L  +M+   
Sbjct: 150 LIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESR 209

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           + P  +   SL+    + G +D A  L N M   G++
Sbjct: 210 LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVV 246



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 112/269 (41%), Gaps = 29/269 (10%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC E K +++ LL+  M + GL       T L+ A  K G+   A  +LD+M+
Sbjct: 322 YNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMV 381

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S  +  V  +   I   C  G ++EA D    M + G+ P+   YT +ID       + 
Sbjct: 382 SSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLN 441

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHE---------------------------- 164
            A ++   M      P    Y+ LI   LK E                            
Sbjct: 442 PAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKM 501

Query: 165 -SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
             F+ AL L  +M E G   ++N Y  L+ GL + G L  A+ LF  M  RG+ P E + 
Sbjct: 502 MKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIY 561

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            SLL    E G   +A+ L   MM  G L
Sbjct: 562 NSLLNCCCELGIYGDAVRLVGAMMEHGHL 590



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 29/279 (10%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D+ +Y   I   C     ++++ ++S M E G+  + +  T ++DAY   G 
Sbjct: 380 MVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGL 439

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE---------------------- 98
            + A  +L  M D+  + +  T+  LI  L K  L ++                      
Sbjct: 440 LNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVW 499

Query: 99  -------AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                  A++ F +M + G  PN+  Y  LI GLCK   +  A+ LFD M +R + P   
Sbjct: 500 KMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEA 559

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y +L++   +   + +A+ L   M E G    L +   L  GL   G  ++A+V+F  +
Sbjct: 560 IYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNL 619

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G   DE+    L+    + G  D   EL   M  RG
Sbjct: 620 LQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARG 658



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 9/170 (5%)

Query: 86  LIDGLCKSGL---------VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
           +++G CK G          V  A   F  MP  G   N   YT LI GLC+   ++   N
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           +F +M + D  P    YT ++    +     EA+NL + M E G + +++ YT ++  + 
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +   L+E R +  EM+ +G++P      +L+  + + G ++ A E+ + M
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLM 170



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 72/171 (42%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           KFE +  L  +M E+G + N      L+    K G    A  L D M +  +  +   + 
Sbjct: 503 KFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYN 562

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            L++  C+ G+  +A+   G M + G  P +     L  GL ++   E+A+ +F  + + 
Sbjct: 563 SLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQC 622

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
               D  A+  LIDG LK+        L   M   G  +    Y  L+ GL
Sbjct: 623 GYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGL 673



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 9/141 (6%)

Query: 121 LIDGLCK---------KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
           +++G CK          N +  A ++F+ MPK+    +  +YT LI G  +     E +N
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
           +  +M E      +  YT +V  L   G   EA  LF EM  RG  P+      ++    
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 232 ERGNMDEAIELQNEMMGRGLL 252
           +   ++E   + +EM+ +GL+
Sbjct: 121 KETKLEEGRRILDEMVEKGLV 141



 Score = 43.9 bits (102), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 64/151 (42%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++  Y  +I GLC   +   ++ L   M E G++ +  I  +L++   + G   +A+ L+
Sbjct: 522 NINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLV 581

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M++      + +  VL  GL + G   +A   F  +   G + +   +  LIDGL K 
Sbjct: 582 GAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKN 641

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
              +    L   M  R        Y  LI+G
Sbjct: 642 GLSDGCSELLGVMEARGCQIHPQTYRMLIEG 672


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  129 bits (325), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 111/218 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D  LY T++ G C +     ++    EM+  GL  + V  TT+++   +A E
Sbjct: 352 MVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVE 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM   R++V  VT+ VLIDG CK G + EA      M   G+ PNV  YTA
Sbjct: 412 LEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTA 471

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L DGLCK+  ++ A  L  EM  + +  +   Y +LI+G  K    ++A+     M    
Sbjct: 472 LTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTAC 531

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D+  YT+L+  L + G L  A  L  EM+ +GI P
Sbjct: 532 LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKP 569



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 127/247 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ +   Y ++I GLC     E +   +++M    L  +    TTL+DA  K+G+
Sbjct: 492 MSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGD 551

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SLL EMLD  I+ T+VT+ VL++G C SG V         M +  +HPN A Y +
Sbjct: 552 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNS 611

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C +N ++    ++  M  RD+ P+   Y  LI G+ K  + KEAL   + M + G
Sbjct: 612 LMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKG 671

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             L   +Y++L+  L++     EAR LFH+M   G+  +  +    +  ++   N++  +
Sbjct: 672 FRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTL 731

Query: 241 ELQNEMM 247
            L +E++
Sbjct: 732 ALCDELV 738



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 119/249 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +  D   Y T+I GLC   + E+++ LL EM    L  + V  T L+D Y K G+
Sbjct: 387 MQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGK 446

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + + M+   +   VVT+  L DGLCK G V+ A +    M + GL  N   Y +
Sbjct: 447 MAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNS 506

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +E+A     +M    + PD   YT LID   K      A +L   M + G
Sbjct: 507 LINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKG 566

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  L+ G    G ++  + L   M+ + I P+     SL+K++    NM    
Sbjct: 567 IKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTT 626

Query: 241 ELQNEMMGR 249
           E+   M  R
Sbjct: 627 EIYKGMRSR 635



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 119/238 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  YG +I G C   + E++  LL EM   G+  N  + T+++      G  S+AL ++
Sbjct: 290 DVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVV 349

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M+  ++ +    +  ++ G C  G +  A  +F  M   GL  +   YT +I+GLC+ 
Sbjct: 350 EDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRA 409

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A  L  EM  R +  D   YT LIDGY K     EA  + N M + GV  ++  Y
Sbjct: 410 VELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTY 469

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           T+L  GL + G +Q A  L HEM  +G+  +     SL+    + G +++A+    +M
Sbjct: 470 TALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADM 527



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  +I G C   K  ++  + + M + G+T N V  T L D   K G+
Sbjct: 422 MWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGD 481

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM +  +E+   T+  LI+GLCK+G + +A+     M    L P+V  YT 
Sbjct: 482 VQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTT 541

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++RA +L  EM  + + P    Y  L++G+      +    L + M E  
Sbjct: 542 LIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKN 601

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y SL+       +++    ++  M  R + P+E     L+K H +  NM EA+
Sbjct: 602 IHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEAL 661

Query: 241 ELQNEMMGRGL 251
              +EM+ +G 
Sbjct: 662 YFHDEMIQKGF 672



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ +  +Y +++  LC +    D+  ++ +M +  +  +  + TT++  +   G+
Sbjct: 317 MVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGD 376

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A    DEM    +    VT+  +I+GLC++  + EA      M    L  +   YT 
Sbjct: 377 LVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTV 436

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +  A  + + M +R + P+   YTAL DG  K    + A  L + M+  G
Sbjct: 437 LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++L+   Y SL+ GL + G+L++A     +M    + PD     +L+    + G++D A 
Sbjct: 497 LELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAH 556

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G+
Sbjct: 557 SLLQEMLDKGI 567



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 7/220 (3%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  E+    + +  ++   L DA    G   +A  L DEM  +     VVT+ +LI G C
Sbjct: 250 LFQELPHKNVCSYNILLKALCDA----GRVKDARQLFDEMASA---PDVVTYGILIHGHC 302

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G +  A+     M   G+ PN  VYT+++  LC K  I  A  + ++M +R +I D  
Sbjct: 303 ALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEA 362

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT ++ G+        A    + M   G+  D   YT+++ GL R   L+EA  L  EM
Sbjct: 363 LYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEM 422

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             R +  DE+    L+  + +RG M EA ++ N M+ RG+
Sbjct: 423 WARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGV 462



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 74/181 (40%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK  +  Y  ++ G C+  + E  K LL  M E  +  N     +LM  Y     
Sbjct: 562 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENN 621

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 +   M    +     T+ +LI G CK+  ++EA+ +   M   G       Y+A
Sbjct: 622 MKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSA 681

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L KK     AR LF +M K  +  ++  Y   ID     ++ +  L L + + E  
Sbjct: 682 LIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEAS 741

Query: 181 V 181
           +
Sbjct: 742 I 742



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 62/147 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI  +   Y +++   CIE+  + +  +   M+   +  N      L+  + KA  
Sbjct: 597 MLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARN 656

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL   DEM+     +T  ++  LI  L K     EA + F  M   GL     VY  
Sbjct: 657 MKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDF 716

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI 147
            ID    ++ +E    L DE+ +  ++
Sbjct: 717 YIDLNFNEDNLESTLALCDELVEASIV 743


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K     +  YG +I   C + KFE    LL EMKE GL  +  I   ++DA FK G 
Sbjct: 263 LKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGC 322

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   +  M++S  E  + T+  LI+G C  G VREA +        GL PN   YT 
Sbjct: 323 EIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTP 382

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI    K     RA  L  EM +R    D  AY AL+ G +       AL ++++M E G
Sbjct: 383 LIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERG 442

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D N Y  L+ GL + G    A+ L  EM+ + + PD  +  +L+      GN+DEA 
Sbjct: 443 ILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAK 502

Query: 241 ELQNEMMGRGL 251
           +L    + RG+
Sbjct: 503 KLFQLTIERGI 513



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 119/249 (47%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK    ++  Y T+I G C     E + LL  E+K  G          +++A+ K G+  
Sbjct: 230 GKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFE 289

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
               LL EM +  + V++  F  +ID   K G   EA D    M + G  P++A Y  LI
Sbjct: 290 AVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLI 349

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +G C K  +  A  L +   +R + P+  +YT LI  + K+  +  A  L   M+E G  
Sbjct: 350 NGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHT 409

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LDL AY +LV GL   G +  A  +  +M+ RGILPD  +   L+    ++G    A +L
Sbjct: 410 LDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQL 469

Query: 243 QNEMMGRGL 251
             EM+ + +
Sbjct: 470 LVEMLDQNV 478



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 2/221 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D  +Y  ++ GLC + +F  +K LL EM +  +T +  +  TL+D + + G 
Sbjct: 438 MMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGN 497

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH-PNVAVYT 119
             EA  L    ++  I+ +VV    +I G CK G++ +A+  F RM + G+H P+   Y+
Sbjct: 498 LDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFN-GVHSPDEFTYS 556

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +IDG  K+N +  A  +F  M K+   P+   +T+LI+G+ ++     A  +   M   
Sbjct: 557 TIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSF 616

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           G + ++  YT L+    + G L +A   F +M+    +P++
Sbjct: 617 GFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPND 657



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 118/243 (48%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y T+I G C + K  +++ LL      GL  N    T L+ A+ K GE   A  
Sbjct: 339 EPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASE 398

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL EM +    + ++ +  L+ GL  +G V  A+    +M + G+ P+  +Y  L+ GLC
Sbjct: 399 LLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLC 458

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           KK     A+ L  EM  +++ PD      L+DG+++H +  EA  L     E G+D  + 
Sbjct: 459 KKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVV 518

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
              +++ G  + G + +A + F  M      PDE    +++  + ++ ++  A+ +   M
Sbjct: 519 ECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLM 578

Query: 247 MGR 249
           + +
Sbjct: 579 LKK 581



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 92/205 (44%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C +L++     G+   A  + DEM+D   +V   T C++  GLCK G V E      +  
Sbjct: 170 CNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRW 229

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             G  PN+  Y  LIDG CK   IERA  LF E+  +  +P    Y A+I+ + K   F+
Sbjct: 230 GKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFE 289

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
               L   M E G+ + L  +  ++    + G   EA      MI  G  PD     +L+
Sbjct: 290 AVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLI 349

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
                +G + EA EL    + RGL 
Sbjct: 350 NGSCSKGKVREAEELLEHAIRRGLF 374



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 104/239 (43%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL  YG ++ GL +  + + +  +  +M E G+  +  I   LM    K G    A  LL
Sbjct: 411 DLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLL 470

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EMLD  +         L+DG  + G + EA   F    + G+  +V    A+I G CK 
Sbjct: 471 VEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKY 530

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A   F  M      PD   Y+ +IDGY+K    + AL +   M +     ++  +
Sbjct: 531 GMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTF 590

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           TSL+ G  R G L  A  +F EM   G  P+ +    L+    + G + +A     +M+
Sbjct: 591 TSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQML 649



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 99/227 (43%), Gaps = 2/227 (0%)

Query: 25  KFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           K E ++ +  EM + NG   N  +C  +     K G+  E   L+++         +V +
Sbjct: 182 KVEIARKVYDEMVDRNGDVDNYTVCI-VTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFY 240

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             LIDG CK+G +  A   F  +   G  P V  Y A+I+  CKK   E    L  EM +
Sbjct: 241 NTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKE 300

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           R +      +  +ID   KH    EA +    M E G + D+  Y +L+ G    G ++E
Sbjct: 301 RGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVRE 360

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           A  L    I RG+ P++     L+    + G    A EL  EM  RG
Sbjct: 361 AEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERG 407



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 11/224 (4%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            +I G C      D+ L    M     + +    +T++D Y K  +   AL +   ML  
Sbjct: 522 AMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKK 581

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
             +  VVTF  LI+G C++G +  A   F  M  FG  PNV  YT LI   CK+  + +A
Sbjct: 582 TCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKA 641

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR-----------MTEVGVDL 183
              F++M     IP+   +  L++G   +     +    N            M   G D 
Sbjct: 642 CFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWDW 701

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            + AY S++  L +   ++ A  L  +M+ +G  PD +  I+LL
Sbjct: 702 RIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALL 745



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 11/202 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII G   ++    +  +   M +     N V  T+L++ + + G+ + A  + +EM 
Sbjct: 555 YSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMR 614

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E  VVT+ +LI   CK G + +A  +F +M      PN A +  L++GL   N I 
Sbjct: 615 SFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIA 674

Query: 133 RARNLFDEMPKRD------MIPD-----TTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            +    +  P         MI D       AY +++    +H+  K AL L ++M   G 
Sbjct: 675 ISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGF 734

Query: 182 DLDLNAYTSLVWGLSRCGHLQE 203
             D  ++ +L+ GL   G LQ+
Sbjct: 735 PPDPVSFIALLHGLCLEGRLQD 756



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 11/170 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K ++  + ++I G C       ++ +  EM+  G   N V  T L+  + K G+
Sbjct: 578 MLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGK 637

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA-----------IDYFGRMPDF 109
            ++A    ++ML ++      TF  L++GL  +  +  +           +++FG M   
Sbjct: 638 LTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISD 697

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           G    +A Y +++  LC+   ++ A  L D+M  +   PD  ++ AL+ G
Sbjct: 698 GWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHG 747



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 1/206 (0%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           +C++L+    +     E  +LL+ M    +  T      +I     SGLV+EA++ +  +
Sbjct: 98  VCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTV 157

Query: 107 PDF-GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            D     P+V    +L++ L     +E AR ++DEM  R+   D      +  G  K   
Sbjct: 158 IDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGK 217

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            +E  +L  +    G   ++  Y +L+ G  + G ++ A +LF E+  +G LP      +
Sbjct: 218 VEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGA 277

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGL 251
           ++    ++G  +   +L  EM  RGL
Sbjct: 278 MINAFCKKGKFEAVDKLLVEMKERGL 303


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  N K ++  Y  +I G C E K   +++LL  MKE GL  NT   T L+D + KAG 
Sbjct: 360 VRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGN 419

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+D M        + T+  +IDGLCK G   EA     R    GLH +   YT 
Sbjct: 420 FGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTI 479

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C++   ++A  +F  M K  + PD   Y  LI  + + +  +E+  L      +G
Sbjct: 480 LISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLG 539

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTS++ G  R GH+  A   FH+M   G  PD I   +L+        +DEA 
Sbjct: 540 LLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEAC 599

Query: 241 ELQNEMMGRGL 251
           +L   M+  GL
Sbjct: 600 QLYETMIDNGL 610



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 5/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  ++ G C   +  D    L +M E G   +   CT ++  + + G 
Sbjct: 219 MLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGF 278

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A     + +   +   ++ F  LI+GLCK G +++A +    M   G  PNV  +TA
Sbjct: 279 VNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTA 338

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LIDGLCKK   E+A  LF ++ + D   P+   YT +I+GY K E    A  L  RM E 
Sbjct: 339 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQ 398

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  + N YT L+ G  + G+   A  L   M   G  P+     +++    ++G   EA
Sbjct: 399 GLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEA 458

Query: 240 IELQNEMMGRGLLSG 254
            +L    + RGL SG
Sbjct: 459 YKL----LRRGLKSG 469



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 120/251 (47%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M  K  K ++  +  +I GLC +   E + +L L  ++ +    N    T +++ Y K  
Sbjct: 324 MVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEE 383

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           + + A  LL  M +  +     T+  LIDG CK+G    A +    M   G  PN+  Y 
Sbjct: 384 KLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYN 443

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+IDGLCKK     A  L     K  +  D   YT LI  + +    K+AL + +RM +V
Sbjct: 444 AIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKV 503

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D++ Y  L+    R   ++E+  LF E +G G+LP +    S++  +   G++  A
Sbjct: 504 GLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSA 563

Query: 240 IELQNEMMGRG 250
           I+  ++M   G
Sbjct: 564 IKFFHKMRDYG 574



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 109/241 (45%), Gaps = 1/241 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + ++I GLC     + +  +L EM   G   N    T L+D   K G   +A  L  +++
Sbjct: 301 FSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 360

Query: 73  DS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            S   +  V T+  +I+G CK   +  A     RM + GL PN   YT LIDG CK    
Sbjct: 361 RSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNF 420

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            RA  L D M K    P+   Y A+IDG  K   F EA  L  R  + G+  D   YT L
Sbjct: 421 GRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTIL 480

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    R    ++A  +F  M   G+ PD      L+     +  ++E+ +L  E +G GL
Sbjct: 481 ISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGL 540

Query: 252 L 252
           L
Sbjct: 541 L 541



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 104/221 (47%), Gaps = 1/221 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  EM +  +  ++     ++  Y + G  S+    L +M++    V   T  ++I    
Sbjct: 215 VFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFS 274

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G V  A  YF +    GL+PN+  +++LI+GLCK   I++A  + +EM ++   P+  
Sbjct: 275 EKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVY 334

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEV-GVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            +TALIDG  K    ++A  L  ++        ++  YT ++ G  +   L  A +L   
Sbjct: 335 THTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIR 394

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  +G++P+      L+  H + GN   A EL + M   G 
Sbjct: 395 MKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGF 435



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 113/274 (41%), Gaps = 39/274 (14%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II GLC + +F ++  LL    ++GL A+ V  T L+  + +  +  +AL++   M 
Sbjct: 442 YNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMF 501

Query: 73  DSRIE-------VTVVTFC----------------------------VLIDGLCKSGLVR 97
              ++       V + TFC                             +I G C+ G + 
Sbjct: 502 KVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHIS 561

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            AI +F +M D+G  P+   Y ALI GLC ++ ++ A  L++ M    + P       L 
Sbjct: 562 SAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLA 621

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
             Y K      A+ +  R+ +    L +    +L+  L     +  A + FH+++ + + 
Sbjct: 622 YEYCKQGDSATAMIILERLEK---KLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLN 678

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            D I   +     YE        +L +E + +G+
Sbjct: 679 VDRITLAAFTTACYESNKFALVSDL-SERISKGI 711



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 77/165 (46%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           ++    + G ++EA++    M + GL     +   +ID       ++ A  +FDEM  R 
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++PD+T+Y  ++ GY +     +       M E G  +D    T ++   S  G +  A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             F + +  G+ P+ I   SL+    + G++ +A E+  EM+ +G
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/207 (20%), Positives = 92/207 (44%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           +  + L   T +   ++ ++ + G+  EA++++ EM +  + +       +ID     G 
Sbjct: 149 LNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGF 208

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           V  A   F  M D  + P+   Y  ++ G C+   I        +M +R    D    T 
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTL 268

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +I  + +      A     +  ++G++ +L  ++SL+ GL + G +++A  +  EM+ +G
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328

Query: 216 ILPDEILCISLLKKHYERGNMDEAIEL 242
             P+     +L+    ++G  ++A  L
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRL 355



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 3/143 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    K D   YG +I GLC ESK +++  L   M +NGL+   V   TL   Y K G+
Sbjct: 570 MRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGD 629

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+ +L E L+ ++ +  V    LI  LC    V  A  +F ++ D  L+ +     A
Sbjct: 630 SATAMIIL-ERLEKKLWIRTVN--TLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAA 686

Query: 121 LIDGLCKKNCIERARNLFDEMPK 143
                 + N      +L + + K
Sbjct: 687 FTTACYESNKFALVSDLSERISK 709


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 131/252 (51%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ +L +Y  ++ GLC E    ++  L SEM   G+  +     +L+  +  AG+
Sbjct: 187 MEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQ 246

Query: 61  PSEALSLLDEM-LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              A+ LL+EM +   +   V TF +L+D LCK G+V EA + FG M   GL P+V    
Sbjct: 247 FQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCN 306

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           AL++G C + C+  A+ +FD M +R  +P+  +Y+ LI+GY K +   EAL L   M + 
Sbjct: 307 ALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQR 366

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            +  D   Y  L+ GLS+ G +     L   M   G  PD I    LL  + +R  +D+A
Sbjct: 367 NLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKA 426

Query: 240 IELQNEMMGRGL 251
           + L   ++  G+
Sbjct: 427 LALFQHIVDTGI 438



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 1/222 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +++++ + G   +    TTLM      G   EAL+L D  +        V +  LI+GLC
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G  R+AI+   +M   G+ PN+ +Y  ++DGLCK+  +  A  L  EM  + +  D  
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 152 AYTALIDGYLKHESFKEALNLKNRMT-EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            Y +LI G+     F+ A+ L N M  +  V  D+  +  LV  L + G + EAR +F  
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGL 292

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           MI RG+ PD + C +L+     RG M EA E+ + M+ RG L
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKL 334



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 120/256 (46%), Gaps = 38/256 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM--KENGLTANTVICTTLMDAYFKA 58
           M GK I  D+  Y ++I G C   +F+ +  LL+EM  KE+ +  +      L+DA  K 
Sbjct: 222 MVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKED-VRPDVYTFNILVDALCKL 280

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G  +EA ++   M+   +E  VV+   L++G C  G + EA + F RM + G  PNV  Y
Sbjct: 281 GMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISY 340

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT------------------------ 154
           + LI+G CK   ++ A  L  EM +R+++PDT  Y                         
Sbjct: 341 STLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRA 400

Query: 155 -----------ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
                       L+D YLK E   +AL L   + + G+  ++  Y  L+ GL + G ++ 
Sbjct: 401 SGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKA 460

Query: 204 ARVLFHEMIGRGILPD 219
           A+ +F  +  +G  P+
Sbjct: 461 AKEIFQLLSVKGCRPN 476



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 1/239 (0%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T++ GLC++ +  ++  L       G + + V   TL++   K G+  +A+ LL +M   
Sbjct: 131 TLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKG 190

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +   ++ + +++DGLCK GLV EA      M   G+  +V  Y +LI G C     + A
Sbjct: 191 GVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGA 250

Query: 135 RNLFDEMP-KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
             L +EM  K D+ PD   +  L+D   K     EA N+   M + G++ D+ +  +L+ 
Sbjct: 251 VRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMN 310

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G    G + EA+ +F  M+ RG LP+ I   +L+  + +   +DEA+ L  EM  R L+
Sbjct: 311 GWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLV 369



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 107/233 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+     ++ G C+     ++K +   M E G   N +  +TL++ Y K   
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKM 352

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL EM    +    VT+  L+DGL KSG V    D    M   G  P++  Y  
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D   K+ C+++A  LF  +    + P+   Y  LIDG  K    K A  +   ++  G
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKG 472

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
              ++  Y  ++ GL R G L EA  L  EM+  G  P+ +    L++   E+
Sbjct: 473 CRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLEK 525



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 3/224 (1%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR--IEVTVVTF 83
           F+D+      M       + V    L+ +  K       +SL    LDS+   + ++VT 
Sbjct: 36  FDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSH-LDSKGTPKPSLVTL 94

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            + I+ L   G +  A     ++   G   +    T L+ GLC K     A NL+D    
Sbjct: 95  SIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVS 154

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           +    D   Y  LI+G  K    ++A+ L  +M + GV  +L  Y  +V GL + G + E
Sbjct: 155 KGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTE 214

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           A  L  EM+G+GI  D     SL+      G    A+ L NEM+
Sbjct: 215 ACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMV 258


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 122/227 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +IKA + +Y  II  LC +     ++ L +EM + G+  + +  + ++D++ ++G 
Sbjct: 67  MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  LL +M++ +I   VVTF  LI+ L K G V EA + +G M   G+ P    Y +
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG CK++ +  A+ + D M  +   PD   ++ LI+GY K +     + +   M   G
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +  +   YT+L+ G  + G L  A+ L + MI  G+ P+ I   S+L
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 124/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGTII GLC     E +  LLS+M+E  + A+ VI   ++D   K G    A +L  EM 
Sbjct: 44  YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I   V+T+  +ID  C+SG   +A      M +  ++P+V  ++ALI+ L K+  + 
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  ++ +M +R + P T  Y ++IDG+ K +   +A  + + M       D+  +++L+
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   +     +F EM  RGI+ + +   +L+    + G++D A +L N M+  G+
Sbjct: 224 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 4/249 (1%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  + T++ GLC E +   +  L+  M E G         T+++   K G+   AL+
Sbjct: 7   RPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYG----TIINGLCKMGDTESALN 62

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M ++ I+  VV +  +ID LCK G    A + F  M D G+ P+V  Y+ +ID  C
Sbjct: 63  LLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +      A  L  +M +R + PD   ++ALI+  +K     EA  +   M   G+     
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y S++ G  +   L +A+ +   M  +   PD +   +L+  + +   +D  +E+  EM
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242

Query: 247 MGRGLLSGS 255
             RG+++ +
Sbjct: 243 HRRGIVANT 251



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 4/215 (1%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E G   + V  TTLM+     G   +AL+L+D M++   +     +  +I+GLCK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
              A++   +M +  +  +V +Y A+ID LCK      A+NLF EM  + + PD   Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +ID + +   + +A  L   M E  ++ D+  +++L+  L + G + EA  ++ +M+ RG
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I P  I   S++    ++  +++A  + + M  + 
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKS 211



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 104/218 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y  +I   C   ++ D++ LL +M E  +  + V  + L++A  K G+
Sbjct: 102 MHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGK 161

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  +  +ML   I  T +T+  +IDG CK   + +A      M      P+V  ++ 
Sbjct: 162 VSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++    +F EM +R ++ +T  YT LI G+ +      A +L N M   G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           V  +   + S++  L     L++A  +  ++    + P
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCP 319



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 88/182 (48%), Gaps = 4/182 (2%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M+++     VVTF  L++GLC  G V +A+    RM + G  P    Y  +I+GLCK   
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
            E A NL  +M +  +      Y A+ID   K      A NL   M + G+  D+  Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++    R G   +A  L  +MI R I PD +   +L+    + G + EA E+  +M+ RG
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 251 LL 252
           + 
Sbjct: 177 IF 178


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 127/254 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K     L  +G+++ G C    FE   LLL EMK+ GL+ N  +   ++DA +K G 
Sbjct: 269 LKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGF 328

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A   L EM ++  E  +VT+  LI+  C  G V EA     +    GL PN   YT 
Sbjct: 329 DIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTP 388

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK+    +A +   EM    +  D  +Y ALI G +       AL +++RM   G
Sbjct: 389 LVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRG 448

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D N Y  L+ GL + G L  A+V+  EM+ + I PD  +  +L+      GN+DEA 
Sbjct: 449 ILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAK 508

Query: 241 ELQNEMMGRGLLSG 254
           +L   ++ +GL  G
Sbjct: 509 KLFQLIIEKGLDPG 522



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 123/236 (52%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + DL  Y T+I   C   + E+++ LL +    GL  N +  T L+  Y K GE ++A  
Sbjct: 345 EPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATD 404

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
            L EM  S +EV ++++  LI GL  +G V  A+    RM + G+ P+  +Y  L++GL 
Sbjct: 405 YLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLF 464

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           KK  +  A+ +  EM  +++ PD   Y  L+DG+++H +  EA  L   + E G+D  + 
Sbjct: 465 KKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVV 524

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            Y  ++ G S+ G +  A +   +M     +PD     +++  + ++ NM+  +++
Sbjct: 525 GYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKI 580



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 109/240 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  YG +I GL +  + + +  +   M   G+  +  I   LM+  FK G+
Sbjct: 409 MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 468

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  +L EMLD  I      +  L+DG  + G + EA   F  + + GL P V  Y  
Sbjct: 469 LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 528

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G  K   ++ A    D+M +   +PD   ++ +IDGY+K  +    L +   M +  
Sbjct: 529 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 588

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YTSL+ G  R G  + A  LF  M   G+ P  +    L+    +   + +A+
Sbjct: 589 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 648



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 124/285 (43%), Gaps = 37/285 (12%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G +I  D      ++ GLC++ + ED   L+      G   N V   TL+D Y K GE  
Sbjct: 201 GDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVE 260

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG-RMPDFGLHPNVAVYTAL 121
            A  L  ++       T+ TF  L++G CK G+  EAID     M D GL  NV +Y  +
Sbjct: 261 SAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMF-EAIDLLLLEMKDRGLSVNVQMYNNI 319

Query: 122 IDG-----------------------------------LCKKNCIERARNLFDEMPKRDM 146
           ID                                     C +  +E A  L ++  +R +
Sbjct: 320 IDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGL 379

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P+   YT L+ GY K   + +A +    M+  G+++D+ +Y +L+ GL   G +  A  
Sbjct: 380 APNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALT 439

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   M+ RGILPD  +   L+   +++G +  A  +  EM+ + +
Sbjct: 440 IRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNI 484



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 6/243 (2%)

Query: 1   MKGKNIKADLPLYGTII---WGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFK 57
           MK + +  ++ +Y  II   + L  + K +D+   L EM EN    + V   TL++ +  
Sbjct: 304 MKDRGLSVNVQMYNNIIDARYKLGFDIKAKDT---LKEMSENCCEPDLVTYNTLINHFCS 360

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            GE  EA  LL++ +   +    +T+  L+ G CK G   +A DY   M   GL  ++  
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMIS 420

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y ALI GL     ++ A  + D M  R ++PD   Y  L++G  K      A  +   M 
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEML 480

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           +  +  D   Y +LV G  R G+L EA+ LF  +I +G+ P  +    ++K   + G MD
Sbjct: 481 DQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMD 540

Query: 238 EAI 240
            AI
Sbjct: 541 NAI 543



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 107/220 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D  +Y  ++ GL  + K   +K++L+EM +  +  +  +  TL+D + + G 
Sbjct: 444 MMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGN 503

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L   +++  ++  VV + V+I G  KSG++  AI    +M      P++  ++ 
Sbjct: 504 LDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFST 563

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG  K++ +     +F  M K++  P+   YT+LI+GY +    K A  L + M   G
Sbjct: 564 IIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHG 623

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +   +  Y+ L+    +   L +A   F  M+     P++
Sbjct: 624 LKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPND 663



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 14/240 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G       +++ L + +M+      +    +T++D Y K    +  L +   M+
Sbjct: 526 YNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMV 585

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +  VVT+  LI+G C+ G  + A   F  M   GL P+V  Y+ LI   CK+  + 
Sbjct: 586 KQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLG 645

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLK-------------HESFKEAL-NLKNRMTE 178
           +A + F+ M      P+  A+  L++G+               HE+ +    +  +RM  
Sbjct: 646 KAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIG 705

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G      AY  ++  L +   ++ A  L ++M+  G+  D +  ++L+      GN  E
Sbjct: 706 DGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKE 765



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 17/264 (6%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + TII G   +        +   M +     N V  T+L++ Y + GE   A  L 
Sbjct: 557 DIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLF 616

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK- 127
             M    ++ +VVT+ +LI   CK   + +A+ YF  M      PN A +  L++G    
Sbjct: 617 SMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNT 676

Query: 128 ---------KNCIERARNLFDEMPKRDMIPD-----TTAYTALIDGYLKHESFKEALNLK 173
                     N  E +R++F++   R MI D       AY  ++    +    K AL L+
Sbjct: 677 KATAVSREPNNLHENSRSMFEDFFSR-MIGDGWTQKAAAYNCILICLCQQRMVKTALQLR 735

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
           N+M   G+  D  ++ +L+ G+   G+ +E R +    +  G L   +     L K    
Sbjct: 736 NKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPE 795

Query: 234 GNMDEAIELQNEMMGRGLLSGSKN 257
           G + EA  +   M+ +G +S +++
Sbjct: 796 GGISEASGILQAMI-KGYVSPNQD 818



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 14/186 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N K ++  Y ++I G C + + + ++ L S M+ +GL  + V  + L+ ++ K  +
Sbjct: 584 MVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAK 643

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK---SGLVREAI-----------DYFGRM 106
             +A+S  + ML ++       F  L++G      + + RE             D+F RM
Sbjct: 644 LGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRM 703

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G     A Y  ++  LC++  ++ A  L ++M    +  D  ++ ALI G     + 
Sbjct: 704 IGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNS 763

Query: 167 KEALNL 172
           KE  N+
Sbjct: 764 KEWRNM 769


>gi|341605781|gb|AEK82993.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605783|gb|AEK82994.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  +   
Sbjct: 65  SGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K D+  Y  +I G+C E + +++   L+ M   G   N +    ++ +    G 
Sbjct: 277 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 336

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL +ML      +VVTF +LI+ LC+ GL+  AID   +MP  G  PN   Y  
Sbjct: 337 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 396

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK+  ++RA    D M  R   PD   Y  L+    K      A+ + N+++  G
Sbjct: 397 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 456

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L  Y +++ GLS+ G  + A  L  EM  +G+ PD I   SL+      G +DEAI
Sbjct: 457 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 516

Query: 241 ELQNEMMGRGL 251
           +  +++ G G+
Sbjct: 517 KFFHDLEGLGI 527



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 115/246 (46%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+  D+  Y TI+  LC   K + +  +L    +     + +  T L++A  K     +A
Sbjct: 211 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 270

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + LLDEM +   +  VVT+ VLI+G+CK G + EAI +   MP +G  PNV  +  ++  
Sbjct: 271 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 330

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           +C       A  L  +M ++   P    +  LI+   +      A+++  +M   G   +
Sbjct: 331 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 390

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
             +Y  L+ G  +   +  A      M+ RG  PD +   +LL    + G +D A+E+ N
Sbjct: 391 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 450

Query: 245 EMMGRG 250
           ++  +G
Sbjct: 451 QLSSKG 456



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 3/241 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++I G C   K + +  ++  ++++G   + +    L+  Y K+GE   AL +LD M   
Sbjct: 154 SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM--- 210

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +   VVT+  ++  LC SG +++A++   R      +P+V  YT LI+  CK++ + +A
Sbjct: 211 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 270

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L DEM  +   PD   Y  LI+G  K     EA+   N M   G   ++  +  ++  
Sbjct: 271 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 330

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           +   G   +A  L  +M+ +G  P  +    L+     +G +  AI++  +M   G    
Sbjct: 331 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 390

Query: 255 S 255
           S
Sbjct: 391 S 391



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC +     +  +L +M  +G T N++    L+  + K  +   A+  LD M+
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+  L+  LCK G V  A++   ++   G  P +  Y  +IDGL K    E
Sbjct: 419 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 478

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  L DEM ++ + PD   Y++L+ G  +     EA+   + +  +G+  +   Y S++
Sbjct: 479 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 538

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL +      A      MI +   P E     L++     G   EA++L NE+  RGL+
Sbjct: 539 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598

Query: 253 SGS 255
             S
Sbjct: 599 KKS 601



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 3/226 (1%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + ED    L  M   G   + + CT+L+  + + G+  +A  +++ +  S     V+T+ 
Sbjct: 129 ELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYN 188

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VLI G CKSG +  A+    RM    + P+V  Y  ++  LC    +++A  + D   ++
Sbjct: 189 VLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 245

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           +  PD   YT LI+   K     +A+ L + M   G   D+  Y  L+ G+ + G L EA
Sbjct: 246 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 305

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               + M   G  P+ I    +L+     G   +A +L ++M+ +G
Sbjct: 306 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 351



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 3/242 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I G C   + +++  +L  M    +  + V   T++     +G+  +A+ +L
Sbjct: 183 DVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVL 239

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D  L       V+T+ +LI+  CK   V +A+     M + G  P+V  Y  LI+G+CK+
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 299

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A    + MP     P+   +  ++        + +A  L + M   G    +  +
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 359

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+  L R G L  A  +  +M   G  P+ +    LL    +   MD AIE  + M+ 
Sbjct: 360 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS 419

Query: 249 RG 250
           RG
Sbjct: 420 RG 421



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 5/195 (2%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCV-LIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
           + GE  +    L+ M+  R ++  +  C  LI G C+ G  ++A      +   G  P+V
Sbjct: 126 RNGELEDGFKFLESMV-YRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 184

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             Y  LI G CK   I+ A  + D M   ++ PD   Y  ++         K+A+ + +R
Sbjct: 185 ITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 241

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
             +     D+  YT L+    +   + +A  L  EM  +G  PD +    L+    + G 
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 301

Query: 236 MDEAIELQNEMMGRG 250
           +DEAI+  N M   G
Sbjct: 302 LDEAIKFLNNMPSYG 316



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 72/152 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K     L  Y T+I GL    K E +  LL EM+  GL  + +  ++L+    + G+
Sbjct: 452 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 511

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+    ++    I    +T+  ++ GLCKS     AID+   M      P  A YT 
Sbjct: 512 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 571

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           LI+G+  +   + A +L +E+  R ++  ++A
Sbjct: 572 LIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 603



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%)

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L ++G + +   +   M   G  P++   T+LI G C+    ++A  + + + +   +PD
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  LI GY K      AL + +RM    V  D+  Y +++  L   G L++A  +  
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLD 240

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             + +   PD I    L++   +   + +A++L +EM  +G
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG 281


>gi|399107190|gb|AFP20359.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  129 bits (325), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 70  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 124 SIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSI 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + I 
Sbjct: 67  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|399107206|gb|AFP20367.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 70  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 67  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ +N K ++  Y  +I G C + K   +++LLS MKE GL  NT   TTL+D + KAG 
Sbjct: 334 VRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGN 393

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L++ M +      V T+  ++DGLCK G V+EA          GL  +   YT 
Sbjct: 394 FERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTI 453

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   CK+  I++A  LF++M K  + PD  +YT LI  + + +  KE+          G
Sbjct: 454 LISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFG 513

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTS++ G  R G+L+ A   FH M   G   D I   +L+    ++  +DEA 
Sbjct: 514 LVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEAR 573

Query: 241 ELQNEMMGRGL 251
            L + M+ +GL
Sbjct: 574 CLYDAMIEKGL 584



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M G+  K ++  +  +I GLC +   E + +L L  ++      N +  T ++  Y +  
Sbjct: 298 MVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDE 357

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           + + A  LL  M +  +     T+  LIDG CK+G    A +    M + G  PNV  Y 
Sbjct: 358 KMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYN 417

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A++DGLCKK  ++ A  +     +  +  D   YT LI  + K    K+AL L N+M + 
Sbjct: 418 AIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKS 477

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D+++YT+L+    R   ++E+ + F E +  G++P      S++  +   GN+  A
Sbjct: 478 GIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLA 537

Query: 240 IELQNEMMGRGLLSGS 255
           ++  + M   G  S S
Sbjct: 538 LKFFHRMSDHGCASDS 553



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 36/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ +   Y  ++ G C      +S   L  M E G   +    + ++  + + G 
Sbjct: 193 MCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGF 252

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + AL       +  +   ++ F  +I+GLCK G V++A +    M   G  PNV  +TA
Sbjct: 253 VTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTA 312

Query: 121 LIDGLCKKNCIERARNLF------------------------------------DEMPKR 144
           LIDGLCKK   E+A  LF                                      M ++
Sbjct: 313 LIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQ 372

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + P+T  YT LIDG+ K  +F+ A  L N M E G   ++  Y ++V GL + G +QEA
Sbjct: 373 GLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEA 432

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +       G+  D++    L+ +H ++  + +A+ L N+M+  G+
Sbjct: 433 YKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGI 479



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 117/245 (47%), Gaps = 4/245 (1%)

Query: 11  PLYGTIIWGLCIESKF---EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           P   T+ W + I ++    E ++ L  EM   G+  N V    ++  Y K G   E+   
Sbjct: 165 PSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRW 224

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L  M++    V   T  +++   C+ G V  A+ YF R  + GL PN+  +T +I+GLCK
Sbjct: 225 LGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCK 284

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV-GVDLDLN 186
           +  +++A  + +EM  R   P+   +TALIDG  K    ++A  L  ++        ++ 
Sbjct: 285 RGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 344

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YT+++ G  R   +  A +L   M  +G+ P+     +L+  H + GN + A EL N M
Sbjct: 345 TYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVM 404

Query: 247 MGRGL 251
              G 
Sbjct: 405 NEEGF 409



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 38/272 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    ++  Y  I+ GLC + + +++  +L     NGL A+ V  T L+  + K  E
Sbjct: 404 MNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAE 463

Query: 61  PSEALSLLDEMLDSRIE-------VTVVTFC----------------------------V 85
             +AL L ++M+ S I+         +  FC                             
Sbjct: 464 IKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTS 523

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I G C+ G +R A+ +F RM D G   +   Y ALI GLCK++ ++ AR L+D M ++ 
Sbjct: 524 MICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKG 583

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P       L   Y K +    A+ +  R+ +    L +    +LV  L     +  A 
Sbjct: 584 LTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEK---KLWVRTVNTLVRKLCSERKVGMAA 640

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           + FH+++ +    + +   + +   YE    D
Sbjct: 641 LFFHKLLDKDPNVNRVTIAAFMTACYESNKYD 672



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 78/165 (47%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           ++    + G V+EAI+    M + GL P+      ++  + +   +E A NLFDEM  R 
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+  +Y  ++ GY K  +  E+      M E G  +D    + +V      G +  A 
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             F      G+ P+ I    +++   +RG++ +A E+  EM+GRG
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 90/192 (46%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++ ++ + G   EA+ ++ EM +  +  +  T   ++  + + GLV  A + F  M   G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + PN   Y  ++ G CK   +  +      M +R  + D    + ++  + +      AL
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
               R  E+G+  +L  +T ++ GL + G +++A  +  EM+GRG  P+     +L+   
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 231 YERGNMDEAIEL 242
            ++G  ++A  L
Sbjct: 318 CKKGWTEKAFRL 329


>gi|341605711|gb|AEK82958.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605785|gb|AEK82995.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605787|gb|AEK82996.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605789|gb|AEK82997.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605793|gb|AEK82999.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605795|gb|AEK83000.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  +   
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I   +  Y TII G+      E +++   EM+  GL  + +   +L++ Y KAG 
Sbjct: 328 MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L  ++  + +  +V+T+ +L+DG C+ G + EA  +   M + G  P+V+ YT 
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G  K   +   R  FDEM  + + PD  AY   I   L   S  EA  L   M   G
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y   + GL + G+L++A VL+ +M+  G+ PD I    L+  H ERG + EA 
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567

Query: 241 ELQNEMMGRGL 251
           ++ + M+  GL
Sbjct: 568 DIFDGMLVSGL 578



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 104/220 (47%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
              EM   GL  +     T + A    G  SEA  L + M+   I    VT+ + +DGLC
Sbjct: 464 FFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLC 523

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG +++A   + +M   GL P+   YT LI   C++  +  AR++FD M    + P   
Sbjct: 524 KSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAV 583

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT  I  Y +  +   A     +M E GV  +   Y  L+  L R G    A   FHEM
Sbjct: 584 TYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEM 643

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + RG+ P++     L+  + + GN +EAI L +EM   G+
Sbjct: 644 LERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGI 683



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 96/195 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I +D   Y   + GLC     +D+ +L  +M  +GL  + +  T L+ A+ + G 
Sbjct: 503 MISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGR 562

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + D ML S +  + VT+ V I   C+ G +  A  +F +M + G+ PN   Y  
Sbjct: 563 LREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNV 622

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC+      A   F EM +R + P+   YT LIDG  K  +++EA+ L + M + G
Sbjct: 623 LIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHG 682

Query: 181 VDLDLNAYTSLVWGL 195
           +  D   + +L  G 
Sbjct: 683 IHPDHCTHNALFKGF 697



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 38/266 (14%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIE---VT 79
           E++++D + + +EM + G+  + V   TL+D++F+ G   +A  LL EM ++R      +
Sbjct: 209 EARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREM-EARPGGCLPS 267

Query: 80  VVTFCVLIDGLCKSGLVREAID----------------------YFGR------------ 105
            VT+ V+I+GL + G + +A                        YF R            
Sbjct: 268 DVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLE 327

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M + G+ P V  Y  +I G+ +   +E AR  F EM    ++PD   Y +LI+GY K  +
Sbjct: 328 MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            KEAL L   +   G+   +  Y  L+ G  R G L+EAR    EM+ +G  PD      
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGL 251
           L+    +  N+    E  +EM+ +GL
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGL 473



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 2/249 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y T I    I     ++  L   M   G++++TV     +D   K+G 
Sbjct: 468 MLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGN 527

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  +M+   ++   +T+  LI   C+ G +REA D F  M   GL P+   YT 
Sbjct: 528 LKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTV 587

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I   C++  +  A   F +M +  + P+   Y  LI    +      A    + M E G
Sbjct: 588 FIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERG 647

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT L+ G  + G+ +EA  L+ EM   GI PD     +L K  ++ G    AI
Sbjct: 648 LSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKG-FDEGQSKHAI 706

Query: 241 E-LQNEMMG 248
           + ++N ++G
Sbjct: 707 QYMENVVLG 715



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 7/223 (3%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
             EM  +G+      C  ++ A        +  S+  EML   IE ++VT+  L+D   +
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 93  SGLVREAIDYFGRMP--DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
            G V +A      M     G  P+   Y  +I+GL +K  +E+A  L D M    M    
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM---RMSKKA 300

Query: 151 TAYT--ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +A+T   LI GY    S ++A  L+  M   G+   +  Y +++ G+ R G+++ AR+ F
Sbjct: 301 SAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKF 360

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM   G+LPD I   SL+  + + GN+ EA+ L  ++   GL
Sbjct: 361 VEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGL 403



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 3/152 (1%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD--MIPDTTAYTALIDGY 160
           +  M   G+ P++  Y  L+D   ++  +++A  L  EM  R    +P    Y  +I+G 
Sbjct: 219 YAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGL 278

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            +    ++A  L +RM  +        +  L+ G    G +++A  L  EM   GI+P  
Sbjct: 279 ARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTV 337

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +   +++   +  GN++ A     EM   GLL
Sbjct: 338 VTYNTIIHGMFRSGNVEAARMKFVEMRAMGLL 369


>gi|341605701|gb|AEK82953.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L + G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFKRM 183



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  +   
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|399107192|gb|AFP20360.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 70  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 124 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 185



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  +   
Sbjct: 67  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|341605775|gb|AEK82990.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605807|gb|AEK83006.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L + G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFKRM 183



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  +   
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 119/240 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I G C   + + +++++++M+  G+  N VI  TLMD Y K G   EAL L + M 
Sbjct: 335 YGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQ 394

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E+   T  ++  G C+S    EA      M + G+ PNV  ++ LID  CK+    
Sbjct: 395 QKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFA 454

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR LF  M K+   P    Y A I+ Y K    +EA  L N M E G+  D   YTSL+
Sbjct: 455 EARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 514

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G    G++  A  LF+EM   G+  + +    ++    + G  DEA +L +EM   G++
Sbjct: 515 DGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIV 574



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ D+ +Y +II   C     + + +L  EM E  L  N      L++   KAGE
Sbjct: 288 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGE 347

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  ++++M    ++V  V F  L+DG CK G++ EA+     M   G   +      
Sbjct: 348 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI 407

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +  G C+ N  E A+ L   M +R + P+  +++ LID Y K ++F EA  L   M + G
Sbjct: 408 IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 467

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  Y + +    + G ++EA  L +EM  RG++PD     SL+      GN+D A+
Sbjct: 468 KAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRAL 527

Query: 241 ELQNEMMGRGL 251
           EL NEM   GL
Sbjct: 528 ELFNEMPQLGL 538



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K  +  Y T++ G            +LS M++N +  N    T L++ Y ++ +  E
Sbjct: 221 KGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEE 280

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L DEML   IE  V  +  +I+  CK G ++ A   F  M +  L PN   Y ALI+
Sbjct: 281 AEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALIN 340

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   ++ A  + ++M  + +  +   +  L+DGY K     EAL L+N M + G ++
Sbjct: 341 GACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI 400

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD--------EILCI----------- 224
           D      +  G  R    +EA+ L   M  RG+ P+        +I C            
Sbjct: 401 DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLF 460

Query: 225 ----------------SLLKKHYERGNMDEAIELQNEMMGRGLL 252
                           + ++++ ++G M+EA +L NEM  RGL+
Sbjct: 461 KVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLM 504



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 126/243 (51%), Gaps = 8/243 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFK---AGEPSEALSLLD 69
           +  ++ GLC + +   +K L+ E+   G   + +   TL++ Y +    G  +E LSL++
Sbjct: 195 WTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLME 254

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           + +   ++  V T+ +LI+   +S  + EA   F  M   G+ P+V +YT++I+  CK  
Sbjct: 255 KNV---VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 311

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++RA  LFDEM +R ++P+   Y ALI+G  K    K A  + N M   GVD++   + 
Sbjct: 312 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 371

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNEMMG 248
           +L+ G  + G + EA  L + M  +G   D   C +++   + R N  +EA  L   M  
Sbjct: 372 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTC-NIIASGFCRSNRREEAKRLLLTMEE 430

Query: 249 RGL 251
           RG+
Sbjct: 431 RGV 433



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 35/261 (13%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           F+ S  +    ++ G   +   C   + A  ++G     +  L +M+DS IE+ V ++  
Sbjct: 138 FDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTA 197

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHP-------------------------------- 113
           ++DGLCK G V  A      +   G  P                                
Sbjct: 198 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 257

Query: 114 ---NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
              NV  YT LI+   + + IE A  LFDEM K+ + PD   YT++I+   K  + K A 
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 317

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L + MTE  +  +   Y +L+ G  + G ++ A ++ ++M  +G+  + ++  +L+  +
Sbjct: 318 VLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 377

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            ++G +DEA+ LQN M  +G 
Sbjct: 378 CKKGMIDEALRLQNIMQQKGF 398



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 101/209 (48%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
            C  L   Y        +L + D       E+   +    +  L +SG +   +++  +M
Sbjct: 124 FCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQM 183

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            D G+   V  +TA++DGLCKK  + RA+ L DE+  +   P    Y  L++GY++ +  
Sbjct: 184 VDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDV 243

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
                + + M +  VD ++  YT L+   SR   ++EA  LF EM+ +GI PD  +  S+
Sbjct: 244 GGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSI 303

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           +  + + GNM  A  L +EM  R L+  +
Sbjct: 304 INWNCKFGNMKRAFVLFDEMTERRLVPNA 332


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 36/276 (13%)

Query: 11  PLYGTIIW-GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           PL  +++  G C     +D+  LL E+  +G+  N     +L+D+Y +         LL 
Sbjct: 148 PLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLK 207

Query: 70  EMLDSRIEVTVVTFCVLIDGL-----------------------------------CKSG 94
           EM +  +E TV T+ +L+DGL                                   C+ G
Sbjct: 208 EMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGG 267

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            VR A + F      G+ PN   Y ALI+G CK   IE A  L  +M  R +  +   + 
Sbjct: 268 NVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFN 327

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +IDGY +H   ++AL +K  M ++G++LD+  Y +L  GL R   +++A+ L H M  +
Sbjct: 328 TMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEK 387

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G+ P+ +   +L+  H + G+M EA  L  +M G+G
Sbjct: 388 GVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKG 423



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 125/249 (50%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  ++ +   YG +I G C   + E +++LL++M+  G+  N ++  T++D Y + G   
Sbjct: 281 GHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVE 340

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL +   M    IE+ + T+  L  GLC+   + +A      M + G+ PN   YT LI
Sbjct: 341 KALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLI 400

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
               K+  +  AR LF +M  +   P    Y  +IDGY+K+ S +EA   K  M + G+ 
Sbjct: 401 SIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLV 460

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y  LV G    G +  A  LF EM  RG  P+ +   +L+    + G  +EA +L
Sbjct: 461 PDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQL 520

Query: 243 QNEMMGRGL 251
            ++M+  GL
Sbjct: 521 YDDMLAAGL 529



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 101/195 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ D+  Y T+  GLC  ++ ED+K LL  M E G+  N V  TTL+  + K G+
Sbjct: 349 MEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGD 408

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  +M       +VVT+ V+IDG  K+G +REA  +   M   GL P++  Y  
Sbjct: 409 MVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAG 468

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    ++ A  LF+EM  R   P+  AYTAL+ G  K    +EA  L + M   G
Sbjct: 469 LVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAG 528

Query: 181 VDLDLNAYTSLVWGL 195
           +  D   Y+ LV  L
Sbjct: 529 LTPDDTLYSVLVGSL 543



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 117/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++  +  Y  ++ GL         + +  EMK   +  +    + +++AY + G 
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + DE +   +E    T+  LI+G CK G +  A      M   G+  N  V+  
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG C+   +E+A  +   M K  +  D   Y  L  G  +    ++A  L + M E G
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +  +YT+L+   ++ G + EAR LF +M G+G  P  +    ++  + + G++ EA 
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAE 448

Query: 241 ELQNEMMGRGLL 252
             + EM  +GL+
Sbjct: 449 RFKKEMEKKGLV 460



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 109/230 (47%), Gaps = 36/230 (15%)

Query: 58  AGEPSEALSLLDEMLDS-RIEVTVVTFCVLIDGLCKSGLVREA----------------- 99
           AG+   A  LL + + S    VT ++  V++DG CKSG V +A                 
Sbjct: 125 AGQLPAAADLLGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNAC 184

Query: 100 -----IDYFGR-------------MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
                +D + R             M + G+ P V  YT L+DGL +   I +   ++DEM
Sbjct: 185 CYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEM 244

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            ++++  D   Y+A+I+ Y +  + + A  + +     GV+ +   Y +L+ G  + G +
Sbjct: 245 KRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQI 304

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + A +L  +M  RG+  ++I+  +++  +   G +++A+E++  M   G+
Sbjct: 305 EAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGI 354


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 122/240 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I G C   K +D+  L  EM   GL  N  IC  L++ Y K G+ SEA  LL  M+
Sbjct: 327 YGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMV 386

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +E    ++  L+DG C+ GLV +AI  +  M   G+  NV  + +L+ GLC+    E
Sbjct: 387 DWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFE 446

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +++  M KR + PD  +Y  L+D   K   F  AL L N +   G      A+ +++
Sbjct: 447 DALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMI 506

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   + EA   F+ M   G  PD +   +L+  + + GN++EA +++ +M    +L
Sbjct: 507 NGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAIL 566



 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 127/242 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I++++  + +++ GLC    FED+  +   M + G+T + V   TL+D  FK GE   AL
Sbjct: 425 IQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRAL 484

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L +++L      +   F  +I+G CK   + EA + F RM + G  P+   Y  LIDG 
Sbjct: 485 ALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGY 544

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +E A  + ++M K  ++P    Y +LI G  K +  +E ++L + M   G+  ++
Sbjct: 545 CKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNV 604

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ G    G L +A   + +MI +G  P+ I+C  ++   Y  G +DEA  L  +
Sbjct: 605 VTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK 664

Query: 246 MM 247
           M+
Sbjct: 665 MV 666



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 104/200 (52%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y   I GLC   K +D+K + S +   G + +     TL+  Y  AG  ++A SL DEM
Sbjct: 711 VYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEM 770

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L   +   ++T+  LI+GLCKSG +  A   F ++   GL PNV  Y  LIDG CK    
Sbjct: 771 LKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNT 830

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A +L ++M K  + P    Y+ALI G+ K     +A NL + M E+  D ++  +  L
Sbjct: 831 REALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKL 890

Query: 192 VWGLSRCGHLQEARVLFHEM 211
           V G  +CG +++   L + M
Sbjct: 891 VEGHVKCGEVKKIAKLHNMM 910



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 4/216 (1%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           L E  ++    N+V+    +    K+G+  +A  +   +L         T+C LI G   
Sbjct: 697 LDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSA 756

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           +G V +A      M   GL PN+  Y ALI+GLCK   ++RA+ LFD++  + + P+  +
Sbjct: 757 AGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVIS 816

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y  LIDGY K+ + +EAL+L+N+M + G+   L  Y++L++G  + G + +A  L  EM 
Sbjct: 817 YNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEM- 875

Query: 213 GRGILPDEILC--ISLLKKHYERGNMDEAIELQNEM 246
            R +  D+ +   + L++ H + G + +  +L N M
Sbjct: 876 -RELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 129/251 (51%), Gaps = 6/251 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  ++  YGT+I G C E + + +     +M E G   N +IC+ ++ + ++ G   E
Sbjct: 598 KGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDE 657

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLI---DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           A  LL +M++  + +    F  L    DG   S  + + +D   +   F L PN  VY  
Sbjct: 658 ANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSK--SFSL-PNSVVYNI 714

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I GLCK   ++ A+ +F  +  R   PD   Y  LI GY    +  +A +L++ M + G
Sbjct: 715 AIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRG 774

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ GL + G+L  A+ LF ++  +G+ P+ I    L+  + + GN  EA+
Sbjct: 775 LAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREAL 834

Query: 241 ELQNEMMGRGL 251
           +L+N+M+  G+
Sbjct: 835 DLRNKMLKEGI 845



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C   K  +++   + MKE G   + V   TL+D Y K G   EA  + ++M 
Sbjct: 502 FNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKME 561

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  ++  +  LI GL KS   RE +D    M   GL PNV  Y  LI G C +  ++
Sbjct: 562 KEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLD 621

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL- 191
           +A   + +M ++   P+    + ++    +     EA  L  +M  + V LD   +  L 
Sbjct: 622 KAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLH 681

Query: 192 ----------------------------------VWGLSRCGHLQEARVLFHEMIGRGIL 217
                                             + GL + G + +A+ +F  ++ RG  
Sbjct: 682 KADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFS 741

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           PD     +L+  +   GN+++A  L++EM+ RGL
Sbjct: 742 PDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGL 775



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ +L +   +I G C   +  +++ LL  M +  L   +   +TLMD + + G  ++A+
Sbjct: 355 LRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAI 414

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID-- 123
           S+ +EML   I+  VVT   L+ GLC+ G   +A+  +  M   G+ P+   Y  L+D  
Sbjct: 415 SVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLL 474

Query: 124 ---------------------------------GLCKKNCIERARNLFDEMPKRDMIPDT 150
                                            G CK   +  A   F+ M +    PD 
Sbjct: 475 FKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDG 534

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LIDGY K  + +EA  +K +M +  +   +  Y SL+ GL +    +E   L  E
Sbjct: 535 VTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSE 594

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  +G+ P+ +   +L+    + G +D+A     +M+ +G 
Sbjct: 595 MCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGF 635



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 1/224 (0%)

Query: 31  LLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           L+   +   G+  +   C+ +++AY K G  + A+  + EM     E+ VVT+  LIDG 
Sbjct: 204 LVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGC 263

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD-MIPD 149
              G +  A      M + G+  N    T LI G C++  +E A  +  EM + + M+ D
Sbjct: 264 VSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLD 323

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
             AY  LIDGY +     +A+ L++ M  VG+ ++L    +L+ G  + G + EA  L  
Sbjct: 324 EYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLM 383

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
            M+   + P+     +L+      G + +AI + NEM+  G+ S
Sbjct: 384 RMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQS 427



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 68/141 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  Y  +I GLC     + ++ L  ++   GL  N +    L+D Y K G 
Sbjct: 770 MLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGN 829

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L ++ML   I  +++T+  LI G CK G + +A +    M +     N+A +  
Sbjct: 830 TREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVK 889

Query: 121 LIDGLCKKNCIERARNLFDEM 141
           L++G  K   +++   L + M
Sbjct: 890 LVEGHVKCGEVKKIAKLHNMM 910



 Score = 44.3 bits (103), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 37/174 (21%)

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK------------------------ 143
           DF   P   V+  ++   C+K  I+ A ++FD M K                        
Sbjct: 143 DFKFSP--TVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESS 200

Query: 144 -----------RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
                        ++PD    + +++ Y K      A++    M  +G +L++  Y SL+
Sbjct: 201 NAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLI 260

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            G    G ++ A ++   M  RGIL +++    L+K +  +  ++EA ++  EM
Sbjct: 261 DGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREM 314


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 125/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ +N K ++  Y  +I G C E K   +++LLS MKE GL  NT   TTL+D + KAG 
Sbjct: 337 VRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGN 396

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L++ M        + T+  +++GLCK G V+EA          GL P+   Y  
Sbjct: 397 FERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNI 456

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   CK+  I +A  LF++M K  + PD  +YT LI  + +    KE+         +G
Sbjct: 457 LMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIG 516

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTS++ G  R G+L  A   FH +   G  PD I   +++    ++   DEA 
Sbjct: 517 IIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEAR 576

Query: 241 ELQNEMMGRGLL 252
            L + M+ +GL+
Sbjct: 577 SLYDSMIEKGLV 588



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 117/213 (54%), Gaps = 1/213 (0%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           GL  N +  T +++   K G   +A  +L+EM+    +  V T   LIDGLCK G   +A
Sbjct: 270 GLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKA 329

Query: 100 IDYFGRMPDFGLH-PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
              F ++     H PNV  YTA+I G C+++ + RA  L   M ++ ++P+T  YT LID
Sbjct: 330 FRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLID 389

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           G+ K  +F+ A +L N M+  G   +L  Y ++V GL + G +QEA  +  +    G+ P
Sbjct: 390 GHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKP 449

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           D+     L+ +H ++ N+ +A+ L N+M+  G+
Sbjct: 450 DKFTYNILMSEHCKQENIRQALALFNKMLKIGI 482



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 127/251 (50%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M GK  K ++  + ++I GLC +   E + +L L  ++      N +  T ++  Y +  
Sbjct: 301 MVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRED 360

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           + + A  LL  M +  +     T+  LIDG CK+G    A D    M   G  PN+  Y 
Sbjct: 361 KLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYN 420

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+++GLCK+  ++ A  + ++  +  + PD   Y  L+  + K E+ ++AL L N+M ++
Sbjct: 421 AIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKI 480

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D+++YT+L+    R   ++E+ + F E +  GI+P      S++  +   GN+  A
Sbjct: 481 GIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLA 540

Query: 240 IELQNEMMGRG 250
           ++  + +   G
Sbjct: 541 MKFFHRLSDHG 551



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 4/246 (1%)

Query: 10  LPLYGTIIWGLCIESKF---EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +P   T+ W + + S+    E ++LL  EM   G+  +++    ++  Y K G   EA  
Sbjct: 167 VPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADK 226

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
            L  ML+    V   TF ++I      G    A+ YF R+ D GL PN+  +T +I+GLC
Sbjct: 227 WLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLC 286

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV-GVDLDL 185
           K+  I++A  + +EM  +   P+   +T+LIDG  K    ++A  L  ++        ++
Sbjct: 287 KRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNV 346

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+++ G  R   L  A +L   M  +G++P+     +L+  H + GN + A +L N 
Sbjct: 347 LTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNL 406

Query: 246 MMGRGL 251
           M   G 
Sbjct: 407 MSSEGF 412



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 35/197 (17%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    +L  Y  I+ GLC   + +++  +L +  +NGL  +      LM  + K   
Sbjct: 407 MSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQEN 466

Query: 61  PSEALSLLDEMLDSRIE-------VTVVTFC----------------------------V 85
             +AL+L ++ML   I+         +  FC                             
Sbjct: 467 IRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTS 526

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I G C+ G +  A+ +F R+ D G  P+   Y A+I GLCK++  + AR+L+D M ++ 
Sbjct: 527 MICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKG 586

Query: 146 MIPDTTAYTALIDGYLK 162
           ++P       L   Y K
Sbjct: 587 LVPCEVTRITLAYEYCK 603



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 82/165 (49%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +++   + G ++EA++    M + GL PN      +I    +   +E A  LF+EM  R 
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD+ +Y  ++  Y K  +  EA    + M E G  +D   +T ++   S  G+   A 
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             F  ++  G+ P+ I    +++   +RG++ +A E+  EM+G+G
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKG 305



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 89/192 (46%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           +++++ + G   EA+ ++ EM +  +     T   +I    + GLV  A   F  M   G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+   Y  ++   CK   I  A      M +R  + D   +T +I  +        AL
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
               R+ ++G++ +L  +T ++ GL + G +++A  +  EM+G+G  P+     SL+   
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 231 YERGNMDEAIEL 242
            ++G  ++A  L
Sbjct: 321 CKKGWTEKAFRL 332


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 126/246 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+AD+ ++ TII  LC     +D+  L  EM+  G+  N V  ++L+      G 
Sbjct: 213 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 272

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL +M++ +I   +VTF  LID   K G   EA   +  M    + P++  Y +
Sbjct: 273 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 332

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G C  + +++A+ +F+ M  +D  PD   Y  LI G+ K +  ++   L   M+  G
Sbjct: 333 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 392

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT+L+ GL   G    A+ +F +M+  G+ PD +    LL      G +++A+
Sbjct: 393 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 452

Query: 241 ELQNEM 246
           E+ + M
Sbjct: 453 EVFDYM 458



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 127/246 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GL + +K  ++  L+  M + G   N V    +++   K G+   AL+
Sbjct: 149 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 208

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL++M  ++IE  VV F  +ID LCK   V +A++ F  M   G+ PNV  Y++LI  LC
Sbjct: 209 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 268

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L  +M ++ + P+   + ALID ++K   F EA  L + M +  +D D+ 
Sbjct: 269 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 328

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y SLV G      L +A+ +F  M+ +   PD +   +L+K   +   +++  EL  EM
Sbjct: 329 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 388

Query: 247 MGRGLL 252
             RGL+
Sbjct: 389 SHRGLV 394



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + +L  YG ++ GLC     + +  LL++M+   + A+ VI  T++D+  K   
Sbjct: 178 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 237

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  EM    I   VVT+  LI  LC  G   +A      M +  ++PN+  + A
Sbjct: 238 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 297

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+     A  L+D+M KR + PD   Y +L++G+  H+   +A  +   M    
Sbjct: 298 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 357

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +L+ G  +   +++   LF EM  RG++ D +   +L++  +  G+ D A 
Sbjct: 358 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 417

Query: 241 ELQNEMMGRGL 251
           ++  +M+  G+
Sbjct: 418 KVFKQMVSDGV 428



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 117/242 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ ++  Y ++I  LC   ++ D+  LLS+M E  +  N V    L+DA+ K G+
Sbjct: 248 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 307

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D+M+   I+  + T+  L++G C    + +A   F  M      P+V  Y  
Sbjct: 308 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 367

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E    LF EM  R ++ DT  YT LI G         A  +  +M   G
Sbjct: 368 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 427

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y+ L+ GL   G L++A  +F  M    I  D  +  ++++   + G +D+  
Sbjct: 428 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 487

Query: 241 EL 242
           +L
Sbjct: 488 DL 489



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 117/242 (48%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           L  Y  +I   C  S+   +  LL +M + G   + V  ++L++ Y      S+A++L+D
Sbjct: 82  LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 141

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           +M++       +TF  LI GL       EA+    RM   G  PN+  Y  +++GLCK+ 
Sbjct: 142 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 201

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
             + A NL ++M    +  D   +  +ID   K+    +ALNL   M   G+  ++  Y+
Sbjct: 202 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 261

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           SL+  L   G   +A  L  +MI + I P+ +   +L+    + G   EA +L ++M+ R
Sbjct: 262 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 321

Query: 250 GL 251
            +
Sbjct: 322 SI 323



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 101/211 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   D+  Y T+I G C   + ED   L  EM   GL  +TV  TTL+   F  G+
Sbjct: 353 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 412

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+   +   ++T+ +L+DGLC +G + +A++ F  M    +  ++ +YT 
Sbjct: 413 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 472

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   ++   +LF  +  + + P+   Y  +I G       +EA  L  +M E G
Sbjct: 473 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 532

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
              +   Y +L+    R G    +  L  EM
Sbjct: 533 PLPNSGTYNTLIRAHLRDGDKAASAELIREM 563



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 114/246 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  D+  Y +++ G C+  + + +K +   M       + V   TL+  + K+  
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 377

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L  EM    +    VT+  LI GL   G    A   F +M   G+ P++  Y+ 
Sbjct: 378 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 437

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +E+A  +FD M K ++  D   YT +I+G  K     +  +L   ++  G
Sbjct: 438 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 497

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y +++ GL     LQEA  L  +M   G LP+     +L++ H   G+   + 
Sbjct: 498 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 557

Query: 241 ELQNEM 246
           EL  EM
Sbjct: 558 ELIREM 563



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +D+  L   M ++    + V    L+ A  K  +    +SL ++M    I   + T+ 
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI+  C+   +  A+   G+M   G  P++   ++L++G C    I  A  L D+M + 
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PDT  +T LI G   H    EA+ L +RM + G   +L  Y  +V GL + G    A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L ++M    I  D ++  +++    +  ++D+A+ L  EM  +G+
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 253



 Score = 44.7 bits (104), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 41/73 (56%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K ++  Y T+I GLC +   +++  LL +MKE+G   N+    TL+ A+ + G+ + 
Sbjct: 496 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 555

Query: 64  ALSLLDEMLDSRI 76
           +  L+ EM   R 
Sbjct: 556 SAELIREMRSCRF 568


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 119/240 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I G C   + + +++++++M+  G+  N VI  TLMD Y K G   EAL L + M 
Sbjct: 331 YGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQ 390

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E+   T  ++  G C+S    EA      M + G+ PNV  ++ LID  CK+    
Sbjct: 391 QKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFA 450

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR LF  M K+   P    Y A I+ Y K    +EA  L N M E G+  D   YTSL+
Sbjct: 451 EARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI 510

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G    G++  A  LF+EM   G+  + +    ++    + G  DEA +L +EM   G++
Sbjct: 511 DGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIV 570



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ D+ +Y +II   C     + + +L  EM E  L  N      L++   KAGE
Sbjct: 284 MLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGE 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  ++++M    ++V  V F  L+DG CK G++ EA+     M   G   +      
Sbjct: 344 MKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNI 403

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +  G C+ N  E A+ L   M +R + P+  +++ LID Y K ++F EA  L   M + G
Sbjct: 404 IASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKG 463

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  Y + +    + G ++EA  L +EM  RG++PD     SL+      GN+D A+
Sbjct: 464 KAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRAL 523

Query: 241 ELQNEMMGRGL 251
           EL NEM   GL
Sbjct: 524 ELFNEMPQLGL 534



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K  +  Y T++ G            +LS M++N +  N    T L++ Y ++ +  E
Sbjct: 217 KGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEE 276

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L DEML   IE  V  +  +I+  CK G ++ A   F  M +  L PN   Y ALI+
Sbjct: 277 AEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALIN 336

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   ++ A  + ++M  + +  +   +  L+DGY K     EAL L+N M + G ++
Sbjct: 337 GACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEI 396

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD--------EILCI----------- 224
           D      +  G  R    +EA+ L   M  RG+ P+        +I C            
Sbjct: 397 DAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLF 456

Query: 225 ----------------SLLKKHYERGNMDEAIELQNEMMGRGLL 252
                           + ++++ ++G M+EA +L NEM  RGL+
Sbjct: 457 KVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLM 500



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 126/243 (51%), Gaps = 8/243 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFK---AGEPSEALSLLD 69
           +  ++ GLC + +   +K L+ E+   G   + +   TL++ Y +    G  +E LSL++
Sbjct: 191 WTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLME 250

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           + +   ++  V T+ +LI+   +S  + EA   F  M   G+ P+V +YT++I+  CK  
Sbjct: 251 KNV---VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 307

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++RA  LFDEM +R ++P+   Y ALI+G  K    K A  + N M   GVD++   + 
Sbjct: 308 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 367

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNEMMG 248
           +L+ G  + G + EA  L + M  +G   D   C +++   + R N  +EA  L   M  
Sbjct: 368 TLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTC-NIIASGFCRSNRREEAKRLLLTMEE 426

Query: 249 RGL 251
           RG+
Sbjct: 427 RGV 429



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 35/261 (13%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           F+ S  +    ++ G   +   C   + A  ++G     +  L +M+DS IE+ V ++  
Sbjct: 134 FDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTA 193

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHP-------------------------------- 113
           ++DGLCK G V  A      +   G  P                                
Sbjct: 194 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 253

Query: 114 ---NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
              NV  YT LI+   + + IE A  LFDEM K+ + PD   YT++I+   K  + K A 
Sbjct: 254 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 313

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L + MTE  +  +   Y +L+ G  + G ++ A ++ ++M  +G+  + ++  +L+  +
Sbjct: 314 VLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 373

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            ++G +DEA+ LQN M  +G 
Sbjct: 374 CKKGMIDEALRLQNIMQQKGF 394



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 101/209 (48%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
            C  L   Y        +L + D       E+   +    +  L +SG +   +++  +M
Sbjct: 120 FCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQM 179

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            D G+   V  +TA++DGLCKK  + RA+ L DE+  +   P    Y  L++GY++ +  
Sbjct: 180 VDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDV 239

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
                + + M +  VD ++  YT L+   SR   ++EA  LF EM+ +GI PD  +  S+
Sbjct: 240 GGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSI 299

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           +  + + GNM  A  L +EM  R L+  +
Sbjct: 300 INWNCKFGNMKRAFVLFDEMTERRLVPNA 328


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 126/235 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C +   + +  + S+M    L  N V  + L+D  FK G+  +AL L D+ML
Sbjct: 507 YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 566

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  T  TF  +I+GLCK G + EA D      + G  P+   Y +++DG  K+  I+
Sbjct: 567 SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNID 626

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  ++ EM +  + P+   YT+LI+G+ K      AL  ++ M E G++LD+ AY++L+
Sbjct: 627 SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 686

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            G  +   ++ A+ LF E++  G+ P+ I+  S++    +  NM+ A+    +M+
Sbjct: 687 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 741



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 133/275 (48%), Gaps = 35/275 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + TII GLC   +  +++  L    E G   + +   +++D + K G    AL++  EM 
Sbjct: 577 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 636

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   VVT+  LI+G CKS  +  A+     M + GL  +V  Y+ALIDG CK+  +E
Sbjct: 637 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 696

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A++LF E+ +  + P+   Y ++I G+    + + AL    +M    +  DL  YT+L+
Sbjct: 697 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 756

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEI--------LC--------------------- 223
            GL + G L  A  L+ EM+ +GI+PD I        LC                     
Sbjct: 757 DGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 816

Query: 224 ------ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                  +L+  ++  GN+ EA  L +EM+ RGL+
Sbjct: 817 PSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 851



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 1/250 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K + +K D   Y  II  +C +        LL EMKE G   +    T+++ A    G  
Sbjct: 287 KERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNM 346

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EAL L +EM++    + +V    L+ G C  G +  A++ F ++ + GL PN   Y+ L
Sbjct: 347 VEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVL 406

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+G C    IE+A  L+ +M    + P      +L+ GYLK   ++EA  L +   + GV
Sbjct: 407 IEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV 466

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++  Y  ++  L + G + EA  L   M+ +G++P+ +    ++  H  +GNMD A  
Sbjct: 467 -ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASS 525

Query: 242 LQNEMMGRGL 251
           + ++M+ R L
Sbjct: 526 VFSDMLARDL 535



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 7/207 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K ++ D+  Y  +I G C     E ++ L  E+ E GL+ N ++  +++  +     
Sbjct: 670 MREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNN 729

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL    +M++ RI   + T+  LIDGL K G +  A D +  M   G+ P++  +  
Sbjct: 730 MEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHV 789

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GLC K  +E AR + +EM +++M P    Y  LI GY +  + KEA  L + M + G
Sbjct: 790 LVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 849

Query: 181 VDLDLNAYTSLVWG-------LSRCGH 200
           +  D   Y  L+ G       LSR  H
Sbjct: 850 LVPDDVTYDILINGKFKGDRSLSRPSH 876



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 35/244 (14%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +I+ G   E   + +  +  EM E G++ N V  T+L++ + K+     AL   DEM 
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------------------ 114
           +  +E+ V  +  LIDG CK   +  A D F  + + GL PN                  
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 731

Query: 115 -----------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                            +  YT LIDGL K+  +  A +L+ EM  + ++PD   +  L+
Sbjct: 732 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 791

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +G       + A  +   M    +   +  Y +L+ G  R G+L+EA  L  EM+ RG++
Sbjct: 792 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 851

Query: 218 PDEI 221
           PD++
Sbjct: 852 PDDV 855



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 122/308 (39%), Gaps = 69/308 (22%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + ++I     +    ++  L  EM   G   N V+ T+LM  Y   G    AL+L +++ 
Sbjct: 333 FTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKIT 392

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP------------------- 113
           +  +    VT+ VLI+G C SG + +A + + +M   G+ P                   
Sbjct: 393 EDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWE 452

Query: 114 ---------------NVAVYTALIDGLCK------------------------------- 127
                          N+  Y  ++  LCK                               
Sbjct: 453 EASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMIL 512

Query: 128 ----KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
               K  ++ A ++F +M  RD+ P+   Y+ LIDG  K    ++AL+L ++M  + +  
Sbjct: 513 GHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAP 572

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
               + +++ GL + G + EAR      +  G +P  +   S++    + GN+D A+ + 
Sbjct: 573 TDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVY 632

Query: 244 NEMMGRGL 251
            EM   G+
Sbjct: 633 REMCEFGV 640



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 84/170 (49%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           T  V++    K G V EA +YF    + G+  +   Y+ +I  +CKK        L +EM
Sbjct: 262 TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 321

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            +R  +P    +T++I   +   +  EAL LK  M   G  ++L   TSL+ G    G+L
Sbjct: 322 KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 381

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             A  LF+++   G+ P+++    L++     GN+++A EL  +M   G+
Sbjct: 382 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 431



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 91/202 (45%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L++AY +A     A+   + M+   +   V    +L+  L +  ++ E  D + +M   G
Sbjct: 196 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 255

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           ++ +      ++    K+  +E A   F E  +R +  D  AY+ +I    K  +    L
Sbjct: 256 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 315

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   M E G       +TS++      G++ EA  L  EMI  G   + ++  SL+K +
Sbjct: 316 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGY 375

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
             +GN+D A+ L N++   GL 
Sbjct: 376 CAQGNLDSALNLFNKITEDGLF 397



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 108/242 (44%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           +P    ++  L   +   + + L ++M   G+  +      ++ A  K G   EA     
Sbjct: 225 VPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFR 284

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           E  +  +++    + ++I  +CK       ++    M + G  P+ A +T++I     + 
Sbjct: 285 ETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQG 344

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +  A  L +EM       +    T+L+ GY    +   ALNL N++TE G+  +   Y+
Sbjct: 345 NMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYS 404

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+ G    G++++A  L+ +M   GI P      SLL+ + +    +EA +L +E +  
Sbjct: 405 VLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDC 464

Query: 250 GL 251
           G+
Sbjct: 465 GV 466



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 6/183 (3%)

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            D  LD R+      F  L++   ++  +  AID F  M    + P V     L+  L +
Sbjct: 184 FDFELDHRV------FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVR 237

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           +N I   R+L+++M  R +  D      ++   LK    +EA        E GV LD  A
Sbjct: 238 RNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGA 297

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y+ ++  + +  +      L  EM  RG +P E    S++     +GNM EA+ L+ EM+
Sbjct: 298 YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 357

Query: 248 GRG 250
             G
Sbjct: 358 NCG 360


>gi|341605713|gb|AEK82959.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605715|gb|AEK82960.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605717|gb|AEK82961.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605719|gb|AEK82962.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605755|gb|AEK82980.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605757|gb|AEK82981.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605759|gb|AEK82982.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605827|gb|AEK83016.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605829|gb|AEK83017.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 129/248 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  DL +Y  +I GL    K E+   L S     G+  + VI +++MDAY + G+  +
Sbjct: 304 KGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGK 363

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ +   ML   I   VVT+ +LI+GLC++G V EA   FG++   GL P+V  Y++LID
Sbjct: 364 AIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLID 423

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +     L+  M ++  +PD    + LI+G  +     EAL    +  + G+ L
Sbjct: 424 GFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTL 483

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   + +L+ G  R    ++   ++  M    ++PD +    L+K   E+G +DEA+ L 
Sbjct: 484 NNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALF 543

Query: 244 NEMMGRGL 251
            +++ +G 
Sbjct: 544 FQLLKKGF 551



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 124/249 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K    D  +Y T+I G C +        +   M+ NG+  +  I   L++ +F+ G    
Sbjct: 549 KGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVEN 608

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            L LL E++   +E  +VT+  +I G C   +  +AI  F  +      PN   +T LID
Sbjct: 609 VLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILID 668

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             CK   ++ A  +F  M +R   P+   Y+ LIDGY K E+ + A  L  +M    V  
Sbjct: 669 AYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSP 728

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++ +Y+ L+ GL + G ++EA + F   IGR +LPD I    L++ + + G + EA+ L 
Sbjct: 729 NIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLY 788

Query: 244 NEMMGRGLL 252
           + M+  G++
Sbjct: 789 DHMLVNGIM 797



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 119/234 (50%), Gaps = 4/234 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  D+ +Y  +I     E   E+   LL E+ + GL  + V   T++  Y     
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKI 640

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A+ L + +   R +   +TF +LID  CK G + +A+  F  M + G  PN+  Y+ 
Sbjct: 641 FSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSC 700

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K    E A  L+++M    + P+  +Y+ LIDG  K    +EA +L  +   +G
Sbjct: 701 LIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEA-SLAFQ-CAIG 758

Query: 181 VDL--DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
             L  D+ AY  L+ G  + G L EA +L+  M+  GI+PD++L  +L +  ++
Sbjct: 759 RHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQ 812



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 110/242 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +   +I GL  +   +++     +  + GLT N  +   L+D  F+     + L + 
Sbjct: 449 DVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMY 508

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M   ++   VVT+ VL+ GL + G + EA+  F ++   G  P+  +Y  LIDG CKK
Sbjct: 509 ILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKK 568

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                   +F  M    + PD   Y  LI+ + +    +  L L   + + G++ D+  Y
Sbjct: 569 RDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTY 628

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ G        +A  LF  +      P+ I    L+  + + G MD+A+ + + M+ 
Sbjct: 629 NTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLE 688

Query: 249 RG 250
           RG
Sbjct: 689 RG 690



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 11/199 (5%)

Query: 64  ALSLLDEMLDS-RIEVTVVTFCVLIDGL----------CKSGLVREAIDYFGRMPDFGLH 112
           A  +LD ++DS RI+V +  +  +  GL           K G V + +++   + + GL 
Sbjct: 178 ASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLV 237

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P +     ++ GLC  N I  A + FD M +    P+   ++ LI+ Y K     EA +L
Sbjct: 238 PKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSL 297

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            N M E G+  DL  Y+ L+ GL R G L+E   LF   + RG+  D ++  S++  +  
Sbjct: 298 YNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVR 357

Query: 233 RGNMDEAIELQNEMMGRGL 251
            G++ +AIE+   M+  G+
Sbjct: 358 VGDLGKAIEVYTRMLKEGI 376



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 103/213 (48%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           E GL    V C  ++       +   A    D M+ S     +VTF  LI+  CK   + 
Sbjct: 233 ERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLD 292

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           EA   +  M + G+ P++ +Y+ LI+GL +   +E   +LF     R +  D   +++++
Sbjct: 293 EAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIM 352

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D Y++     +A+ +  RM + G+  ++  Y+ L+ GL R G + EA  +F +++ +G+ 
Sbjct: 353 DAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLE 412

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           P  +   SL+    +  N+ +   L   M+ +G
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 91/207 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C      D   L   M   G   + V+C+ L++   + G   EAL    + +
Sbjct: 418 YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAV 477

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              + +    F  LIDG  +    R+ +  +  M  + + P+V  YT L+ GL ++  ++
Sbjct: 478 KRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLD 537

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF ++ K+   PD   Y  LIDG+ K       L +   M   G+  D+  Y  L+
Sbjct: 538 EALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLI 597

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
               R G ++    L  E+I  G+ PD
Sbjct: 598 NMFFREGCVENVLELLREIIKYGLEPD 624



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 102/201 (50%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           + +++ K GE  + L+    +++  +   +V    ++ GLC    +  A D+F  M   G
Sbjct: 211 VFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSG 270

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PN+  ++ LI+  CK+  ++ A +L++ M ++ ++PD   Y+ LI+G  +    +E  
Sbjct: 271 PSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGN 330

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           +L +     GV +D+  ++S++    R G L +A  ++  M+  GI P+ +    L+   
Sbjct: 331 SLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGL 390

Query: 231 YERGNMDEAIELQNEMMGRGL 251
              G + EA  +  +++ +GL
Sbjct: 391 CRNGRVLEACGVFGQILKQGL 411


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 131/276 (47%), Gaps = 36/276 (13%)

Query: 12  LYGTIIWGLCIESKFEDSK-LLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           LY T+I G     +FE++K LL + M   G   +      ++D   K G    AL LL+E
Sbjct: 343 LYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNE 402

Query: 71  MLDSRIEVTVVTFCVLIDG-----------------------------------LCKSGL 95
           M+  R E  V+T+ +LI+G                                   LCK G 
Sbjct: 403 MVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGN 462

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + EA+  FG M   G  P++  + +LI+GLCK + +E A +L+ +M    +I +T  Y  
Sbjct: 463 IEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNT 522

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L+  +L  +S ++A  L + M   G  LD   Y  L+  L + G +++   LF EM+G+G
Sbjct: 523 LVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKG 582

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I P  I C  L+      G +++A++   +M+ RGL
Sbjct: 583 IFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGL 618



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 130/252 (51%), Gaps = 5/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   +  +G ++  LC+ S+ + +  LL +M ++G   N+VI  TL+ A  +   
Sbjct: 196 MLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNR 255

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL LL++M     E  V TF  +I GLC++G + EA     RM   G   +   Y  
Sbjct: 256 VSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGY 315

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN-LKNRMTEV 179
           L+ GLC+   ++ AR L +++P     P+T  Y  LI GY+    F+EA + L N M   
Sbjct: 316 LMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIA 371

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G + D   +  ++ GL + G+L  A  L +EM+ +   P+ I    L+    ++G ++EA
Sbjct: 372 GYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEA 431

Query: 240 IELQNEMMGRGL 251
            E+ N M  +GL
Sbjct: 432 AEIVNSMSAKGL 443



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 109/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK  K D+  + ++I GLC   K E++  L  +M   G+ ANTV   TL+ A+     
Sbjct: 473 MSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDS 532

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+DEML     +  +T+  LI  LCK+G V + +  F  M   G+ P +     
Sbjct: 533 IQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNI 592

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC+   +  A     +M  R + PD   Y +LI+G  K    +EA NL N++   G
Sbjct: 593 LISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEG 652

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   Y +L+      G   +A +L ++ +  G +P+E+
Sbjct: 653 IRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEV 693



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 5/250 (2%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  +  +I GLC   +  ++  LL  M   G + + +    LM    + G+  EA +
Sbjct: 272 EPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARA 331

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY-FGRMPDFGLHPNVAVYTALIDGL 125
           LL+++ +       V +  LI G   SG   EA D  +  M   G  P+   +  +IDGL
Sbjct: 332 LLNKIPNP----NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGL 387

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            KK  +  A  L +EM  +   P+   YT LI+G+ K    +EA  + N M+  G+ L+ 
Sbjct: 388 VKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNT 447

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+  L + G+++EA  LF EM G+G  PD     SL+    +   M+EA+ L ++
Sbjct: 448 VGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHD 507

Query: 246 MMGRGLLSGS 255
           M   G+++ +
Sbjct: 508 MFLEGVIANT 517



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 119/274 (43%), Gaps = 35/274 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + ++  Y  +I G C + + E++  +++ M   GL+ NTV    L+ A  K G 
Sbjct: 403 MVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGN 462

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA---- 116
             EAL L  EM     +  + TF  LI+GLCK+  + EA+  +  M   G+  N      
Sbjct: 463 IEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNT 522

Query: 117 -------------------------------VYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                           Y  LI  LCK   +E+   LF+EM  + 
Sbjct: 523 LVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKG 582

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P   +   LI G  +     +AL     M   G+  D+  Y SL+ GL + GH+QEA 
Sbjct: 583 IFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEAS 642

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            LF+++   GI PD I   +L+ +H   G  ++A
Sbjct: 643 NLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDA 676



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 9/220 (4%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM-----LDSRIEVTVVTFCVL 86
           LL +MK+ GL     +   +M  Y KAG P +A  LL +M      D   +   V   +L
Sbjct: 121 LLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDIL 180

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           +DG C     R A + F  M   G+ P V  +  ++  LC  + ++ A +L  +M K   
Sbjct: 181 VDGDCP----RVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGC 236

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           +P++  Y  LI    ++    EAL L   M  +  + D+  +  ++ GL R G + EA  
Sbjct: 237 VPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAK 296

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L   M+ RG   D +    L+      G +DEA  L N++
Sbjct: 297 LLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI 336



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 1/171 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC     E    L  EM   G+    + C  L+    + G+ ++AL  L +M+
Sbjct: 555 YNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMI 614

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   +VT+  LI+GLCK G V+EA + F ++   G+ P+   Y  LI   C +    
Sbjct: 615 HRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFN 674

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            A  L  +      IP+   ++ LI+  +K   +    + K+   E GV  
Sbjct: 675 DACLLLYKGVDSGFIPNEVTWSILINYIVKKIPWGARFS-KDFTVECGVSF 724



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 58/128 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I   +     +I GLC   K  D+   L +M   GLT + V   +L++   K G 
Sbjct: 578 MLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGH 637

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +L +++    I    +T+  LI   C  G+  +A     +  D G  PN   ++ 
Sbjct: 638 VQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSI 697

Query: 121 LIDGLCKK 128
           LI+ + KK
Sbjct: 698 LINYIVKK 705


>gi|341605763|gb|AEK82984.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSI 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L + G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRM 183



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + I 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
          Length = 561

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 115/212 (54%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G+ AN + C   +D   K G   EA  L   M D  ++   VT+ +LI  LCK G++ +A
Sbjct: 46  GIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDA 105

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +  F RM + G+   V  Y +LI+G CK N   +AR L +EM  + + P   +Y+ LI G
Sbjct: 106 LCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAG 165

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             +      A+ L   MT   V  ++  +T+L+ G  + G++ EA  LFH+M+   ++P+
Sbjct: 166 LCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPN 225

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           E+    +++ +   GN+ +A +L ++M+ RGL
Sbjct: 226 EVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGL 257



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 103/205 (50%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           + ++ +++ L   M + GL  N V    L+ +  K G   +AL + D M +  I +TV  
Sbjct: 64  DGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYP 123

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           +  LI+G CK     +A      M   GL P+ A Y+ LI GLC+K  +  A  L  EM 
Sbjct: 124 YNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMT 183

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           +  +  +   +TALI G+ K  +  EA  L ++M E  +  +   +  ++ G  R G+++
Sbjct: 184 RNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIR 243

Query: 203 EARVLFHEMIGRGILPDEILCISLL 227
           +A  L+ +M+ RG+ PD     SL+
Sbjct: 244 KAFQLYDQMLDRGLTPDNYTYRSLI 268



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 15/253 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+  +  Y ++I G C  + F  ++ LL+EM   GLT +    + L+    + G+
Sbjct: 112 MREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGD 171

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+ L  EM  + +   V TF  LI G CK G + EA   F +M +  L PN   +  
Sbjct: 172 LASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNV 231

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID------GYLKHESFKEALNLKN 174
           +I+G C+   I +A  L+D+M  R + PD   Y +LI       G +K + F    +L+N
Sbjct: 232 MIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEF--VADLEN 289

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
                   L+  + T+L+ G  + G    A +L  EM+    LP+       L      G
Sbjct: 290 NCAV----LNSFSLTALMHGFCKEG---SAEILCKEMLAGHFLPNSYTYNCFLDYLANEG 342

Query: 235 NMDEAIELQNEMM 247
            +++A  L   M+
Sbjct: 343 ELEKAKVLHAAML 355



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 83/166 (50%)

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           ID L K G  REA   F  M D GL PN   Y  LI  LCK+  +E A  +FD M ++ +
Sbjct: 58  IDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGI 117

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
                 Y +LI+GY KH +F +A  L N M   G+     +Y+ L+ GL R G L  A  
Sbjct: 118 RMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAME 177

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           L  EM    +  +     +L+    + GNMDEA  L ++MM   L+
Sbjct: 178 LHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLV 223



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 90/180 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC     ED+  +   M+E G+        +L++ Y K     +A  LL+EM+
Sbjct: 89  YAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMV 148

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +  ++  LI GLC+ G +  A++    M    +  NV  +TALI G CK   ++
Sbjct: 149 AKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMD 208

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M +  ++P+   +  +I+GY +  + ++A  L ++M + G+  D   Y SL+
Sbjct: 209 EATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLI 268



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 119/286 (41%), Gaps = 39/286 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +      Y  +I GLC +     +  L  EM  N ++ N    T L+  + K G 
Sbjct: 147 MVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGN 206

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-- 118
             EA  L  +M++S +    VTF V+I+G C+ G +R+A   + +M D GL P+   Y  
Sbjct: 207 MDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRS 266

Query: 119 ---------------------------------TALIDGLCKKNCIERARNLFDEMPKRD 145
                                            TAL+ G CK+     A  L  EM    
Sbjct: 267 LISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHGFCKEG---SAEILCKEMLAGH 323

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            +P++  Y   +D YL +E   E   + +     G   +   + +L+ G    G +Q A 
Sbjct: 324 FLPNSYTYNCFLD-YLANEGELEKAKVLHAAMLEGCLANTVTFNTLIKGFCMAGQIQGAI 382

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L  +    G  PD I   +++ +  + G+ ++A EL NEM+ +GL
Sbjct: 383 DLMQKNTESGFFPDCISYSTIINELCKVGDTNKAFELWNEMLYKGL 428



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 1/163 (0%)

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           SG + ++    G+    G+  N+    A ID L K      A  LF  M  R + P+   
Sbjct: 29  SGHIHKSFRLTGQNCKLGIVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVT 88

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y  LI    K    ++AL + +RM E G+ + +  Y SL+ G  +  +  +AR L +EM+
Sbjct: 89  YAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMV 148

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            +G+ P       L+     +G++  A+EL  EM  R  +SG+
Sbjct: 149 AKGLTPSPASYSPLIAGLCRKGDLASAMELHREMT-RNAVSGN 190



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 4/165 (2%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            ++ G C E   E   +L  EM       N+      +D     GE  +A  L   ML+ 
Sbjct: 301 ALMHGFCKEGSAE---ILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLEG 357

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +  TV TF  LI G C +G ++ AID   +  + G  P+   Y+ +I+ LCK     +A
Sbjct: 358 CLANTV-TFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKA 416

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             L++EM  + + PD  AYT LI     H  F + L + + M  V
Sbjct: 417 FELWNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGIYSDMVTV 461


>gi|341605761|gb|AEK82983.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSI 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + I 
Sbjct: 65  SGSVEDAIXLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 130/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  DL +Y  +I GL    K E+   L S     G+  + VI +++MDAY + G+
Sbjct: 301 MIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGD 360

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +   ML   I   VVT+ +LI+GLC++G V EA   FG++   GL P+V  Y++
Sbjct: 361 LGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSS 420

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +     L+  M ++  +PD    + LI+G  +     EAL    +  + G
Sbjct: 421 LIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRG 480

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   + +L+ G  R    ++   ++  M    ++PD +    L+K   E+G +DEA+
Sbjct: 481 LTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEAL 540

Query: 241 ELQNEMMGRGL 251
            L  +++ +G 
Sbjct: 541 ALFFQLLKKGF 551



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 124/249 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K    D  +Y T+I G C +        +   M+ NG+  +  I   L++ +F+ G    
Sbjct: 549 KGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVEN 608

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            L LL E++   +E  +VT+  +I G C   +  +AI  F  +      PN   +T LID
Sbjct: 609 VLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILID 668

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             CK   ++ A  +F  M +R   P+   Y+ LIDGY K E+ + A  L  +M    V  
Sbjct: 669 AYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSP 728

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++ +Y+ L+ GL + G ++EA + F   IGR +LPD I    L++ + + G + EA+ L 
Sbjct: 729 NIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLY 788

Query: 244 NEMMGRGLL 252
           + M+  G++
Sbjct: 789 DHMLVNGIM 797



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 4/224 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  D+ +Y  +I     E   E+   LL E+ + GL  + V   T++  Y     
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKI 640

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A+ L + +   R +   +TF +LID  CK G + +A+  F  M + G  PN+  Y+ 
Sbjct: 641 FSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSC 700

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K    E A  L+++M    + P+  +Y+ LIDG  K    +EA +L  +   +G
Sbjct: 701 LIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEA-SLAFQ-CAIG 758

Query: 181 VDL--DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             L  D+ AY  L+ G  + G L EA +L+  M+  GI+PD++L
Sbjct: 759 RHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLL 802



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 110/242 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +   +I GL  +   +++     +  + GLT N  +   L+D  F+     + L + 
Sbjct: 449 DVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMY 508

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M   ++   VVT+ VL+ GL + G + EA+  F ++   G  P+  +Y  LIDG CKK
Sbjct: 509 ILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKK 568

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                   +F  M    + PD   Y  LI+ + +    +  L L   + + G++ D+  Y
Sbjct: 569 RDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTY 628

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ G        +A  LF  +      P+ I    L+  + + G MD+A+ + + M+ 
Sbjct: 629 NTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLE 688

Query: 249 RG 250
           RG
Sbjct: 689 RG 690



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 11/199 (5%)

Query: 64  ALSLLDEMLDS-RIEVTVVTFCVLIDGL----------CKSGLVREAIDYFGRMPDFGLH 112
           A  +LD ++DS RI+V +  +  +  GL           K G V + +++   + + GL 
Sbjct: 178 ASEMLDLLIDSDRIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLV 237

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P +     ++ GLC  N I  A + FD M +    P+   ++ LI+ Y K     EA +L
Sbjct: 238 PKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSL 297

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            N M E G+  DL  Y+ L+ GL R G L+E   LF   + RG+  D ++  S++  +  
Sbjct: 298 YNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVR 357

Query: 233 RGNMDEAIELQNEMMGRGL 251
            G++ +AIE+   M+  G+
Sbjct: 358 VGDLGKAIEVYTRMLKEGI 376



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 103/213 (48%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           E GL    V C  ++       +   A    D M+ S     +VTF  LI+  CK   + 
Sbjct: 233 ERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLD 292

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           EA   +  M + G+ P++ +Y+ LI+GL +   +E   +LF     R +  D   +++++
Sbjct: 293 EAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIM 352

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D Y++     +A+ +  RM + G+  ++  Y+ L+ GL R G + EA  +F +++ +G+ 
Sbjct: 353 DAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLE 412

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           P  +   SL+    +  N+ +   L   M+ +G
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 72/144 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I   C + + +D+ L+ S M E G   N +  + L+D YFK      A  L ++ML
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML 722

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             R+   +V++ +LIDGLCK GL+ EA   F       L P+V  Y  LI G CK   + 
Sbjct: 723 GDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLA 782

Query: 133 RARNLFDEMPKRDMIPDTTAYTAL 156
            A  L+D M    ++PD     AL
Sbjct: 783 EAMMLYDHMLVNGIMPDDLLQKAL 806



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 91/207 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C      D   L   M   G   + V+C+ L++   + G   EAL    + +
Sbjct: 418 YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAV 477

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              + +    F  LIDG  +    R+ +  +  M  + + P+V  YT L+ GL ++  ++
Sbjct: 478 KRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLD 537

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF ++ K+   PD   Y  LIDG+ K       L +   M   G+  D+  Y  L+
Sbjct: 538 EALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLI 597

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
               R G ++    L  E+I  G+ PD
Sbjct: 598 NMFFREGCVENVLELLREIIKYGLEPD 624



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 102/201 (50%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           + +++ K GE  + L+    +++  +   +V    ++ GLC    +  A D+F  M   G
Sbjct: 211 VFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSG 270

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PN+  ++ LI+  CK+  ++ A +L++ M ++ ++PD   Y+ LI+G  +    +E  
Sbjct: 271 PSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGN 330

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           +L +     GV +D+  ++S++    R G L +A  ++  M+  GI P+ +    L+   
Sbjct: 331 SLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGL 390

Query: 231 YERGNMDEAIELQNEMMGRGL 251
              G + EA  +  +++ +GL
Sbjct: 391 CRNGRVLEACGVFGQILKQGL 411


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K D+  Y  +I G+C E + +++   L+ M   G   N +    ++ +    G 
Sbjct: 220 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 279

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL +ML      +VVTF +LI+ LC+ GL+  AID   +MP  G  PN   Y  
Sbjct: 280 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 339

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK+  ++RA    D M  R   PD   Y  L+    K      A+ + N+++  G
Sbjct: 340 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 399

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L  Y +++ GLS+ G  + A  L  EM  +G+ PD I   SL+      G +DEAI
Sbjct: 400 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 459

Query: 241 ELQNEMMGRGL 251
           +  +++ G G+
Sbjct: 460 KFFHDLEGLGI 470



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 115/246 (46%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+  D+  Y TI+  LC   K + +  +L    +     + +  T L++A  K     +A
Sbjct: 154 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 213

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + LLDEM +   +  VVT+ VLI+G+CK G + EAI +   MP +G  PNV  +  ++  
Sbjct: 214 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 273

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           +C       A  L  +M ++   P    +  LI+   +      A+++  +M   G   +
Sbjct: 274 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 333

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
             +Y  L+ G  +   +  A      M+ RG  PD +   +LL    + G +D A+E+ N
Sbjct: 334 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 393

Query: 245 EMMGRG 250
           ++  +G
Sbjct: 394 QLSSKG 399



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 113/241 (46%), Gaps = 3/241 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++I G C   K + +  ++  ++++G   + +    L+  Y K+GE   AL +LD M   
Sbjct: 97  SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM--- 153

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +   VVT+  ++  LC SG +++A++   R      +P+V  YT LI+  CK++ + +A
Sbjct: 154 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 213

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L DEM  +   PD   Y  LI+G  K     EA+   N M   G   ++  +  ++  
Sbjct: 214 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 273

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           +   G   +A  L  +M+ +G  P  +    L+     +G +  AI++  +M   G    
Sbjct: 274 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 333

Query: 255 S 255
           S
Sbjct: 334 S 334



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC +     +  +L +M  +G T N++    L+  + K  +   A+  LD M+
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+  L+  LCK G V  A++   ++   G  P +  Y  +IDGL K    E
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  L DEM ++ + PD   Y++L+ G  +     EA+   + +  +G+  +   Y S++
Sbjct: 422 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 481

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL +      A      MI +   P E     L++     G   EA++L NE+  RGL+
Sbjct: 482 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541

Query: 253 SGS 255
             S
Sbjct: 542 KKS 544



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 3/226 (1%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + ED    L  M   G   + + CT+L+  + + G+  +A  +++ +  S     V+T+ 
Sbjct: 72  ELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYN 131

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VLI G CKSG +  A+    RM    + P+V  Y  ++  LC    +++A  + D   ++
Sbjct: 132 VLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 188

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           +  PD   YT LI+   K     +A+ L + M   G   D+  Y  L+ G+ + G L EA
Sbjct: 189 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 248

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               + M   G  P+ I    +L+     G   +A +L ++M+ +G
Sbjct: 249 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 3/242 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I G C   + +++  +L  M    +  + V   T++     +G+  +A+ +L
Sbjct: 126 DVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVL 182

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D  L       V+T+ +LI+  CK   V +A+     M + G  P+V  Y  LI+G+CK+
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 242

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A    + MP     P+   +  ++        + +A  L + M   G    +  +
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 302

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+  L R G L  A  +  +M   G  P+ +    LL    +   MD AIE  + M+ 
Sbjct: 303 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS 362

Query: 249 RG 250
           RG
Sbjct: 363 RG 364



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 85/195 (43%), Gaps = 5/195 (2%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCV-LIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
           + GE  +    L+ M+  R ++  +  C  LI G C+ G  ++A      +   G  P+V
Sbjct: 69  RNGELEDGFKFLESMV-YRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 127

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             Y  LI G CK   I+ A  + D M   ++ PD   Y  ++         K+A+ + +R
Sbjct: 128 ITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 184

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
             +     D+  YT L+    +   + +A  L  EM  +G  PD +    L+    + G 
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 244

Query: 236 MDEAIELQNEMMGRG 250
           +DEAI+  N M   G
Sbjct: 245 LDEAIKFLNNMPSYG 259



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 72/152 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K     L  Y T+I GL    K E +  LL EM+  GL  + +  ++L+    + G+
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 454

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+    ++    I    +T+  ++ GLCKS     AID+   M      P  A YT 
Sbjct: 455 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 514

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           LI+G+  +   + A +L +E+  R ++  ++A
Sbjct: 515 LIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 546



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%)

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L ++G + +   +   M   G  P++   T+LI G C+    ++A  + + + +   +PD
Sbjct: 67  LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  LI GY K      AL + +RM    V  D+  Y +++  L   G L++A  +  
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLD 183

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             + +   PD I    L++   +   + +A++L +EM  +G
Sbjct: 184 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKG 224


>gi|341605765|gb|AEK82985.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605767|gb|AEK82986.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605769|gb|AEK82987.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605771|gb|AEK82988.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SIFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSI 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + I 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSIF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|341605727|gb|AEK82966.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605729|gb|AEK82967.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+B   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM B G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  +   
Sbjct: 65  SGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 127/246 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GL + +K  ++  L+  M + G   N V    +++   K G+   AL+
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL++M  ++IE  VV F  +ID LCK   V +A++ F  M   G+ PNV  Y++LI  LC
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L  +M ++ + P+   + ALID ++K   F EA  L + M +  +D D+ 
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y SLV G      L +A+ +F  M+ +   PD +   +L+K   +   +++  EL  EM
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426

Query: 247 MGRGLL 252
             RGL+
Sbjct: 427 SHRGLV 432



 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 126/246 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+AD+ ++ TII  LC     +D+  L  EM+  G+  N V  ++L+      G 
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL +M++ +I   +VTF  LID   K G   EA   +  M    + P++  Y +
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G C  + +++A+ +F+ M  +D  PD   Y  LI G+ K +  ++   L   M+  G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT+L+ GL   G    A+ +F +M+  G+ PD +    LL      G +++A+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490

Query: 241 ELQNEM 246
           E+ + M
Sbjct: 491 EVFDYM 496



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + +L  YG ++ GLC     + +  LL++M+   + A+ VI  T++D+  K   
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  EM    I   VVT+  LI  LC  G   +A      M +  ++PN+  + A
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+     A  L+D+M KR + PD   Y +L++G+  H+   +A  +   M    
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +L+ G  +   +++   LF EM  RG++ D +   +L++  +  G+ D A 
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455

Query: 241 ELQNEMMGRGL 251
           ++  +M+  G+
Sbjct: 456 KVFKQMVSDGV 466



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 117/242 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ ++  Y ++I  LC   ++ D+  LLS+M E  +  N V    L+DA+ K G+
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D+M+   I+  + T+  L++G C    + +A   F  M      P+V  Y  
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E    LF EM  R ++ DT  YT LI G         A  +  +M   G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y+ L+ GL   G L++A  +F  M    I  D  +  ++++   + G +D+  
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525

Query: 241 EL 242
           +L
Sbjct: 526 DL 527



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C  S+   +  LL +M + G   + V  ++L++ Y      S+A++L+D+M+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +       +TF  LI GL       EA+    RM   G  PN+  Y  +++GLCK+   +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NL ++M    +  D   +  +ID   K+    +ALNL   M   G+  ++  Y+SL+
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L   G   +A  L  +MI + I P+ +   +L+    + G   EA +L ++M+ R +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 101/211 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   D+  Y T+I G C   + ED   L  EM   GL  +TV  TTL+   F  G+
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+   +   ++T+ +L+DGLC +G + +A++ F  M    +  ++ +YT 
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   ++   +LF  +  + + P+   Y  +I G       +EA  L  +M E G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
              +   Y +L+    R G    +  L  EM
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREM 601



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 114/246 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  D+  Y +++ G C+  + + +K +   M       + V   TL+  + K+  
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L  EM    +    VT+  LI GL   G    A   F +M   G+ P++  Y+ 
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +E+A  +FD M K ++  D   YT +I+G  K     +  +L   ++  G
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y +++ GL     LQEA  L  +M   G LP+     +L++ H   G+   + 
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 595

Query: 241 ELQNEM 246
           EL  EM
Sbjct: 596 ELIREM 601



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +D+  L   M ++    + V    L+ A  K  +    +SL ++M    I   + T+ 
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI+  C+   +  A+   G+M   G  P++   ++L++G C    I  A  L D+M + 
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PDT  +T LI G   H    EA+ L +RM + G   +L  Y  +V GL + G    A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L ++M    I  D ++  +++    +  ++D+A+ L  EM  +G+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291



 Score = 45.1 bits (105), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 41/73 (56%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K ++  Y T+I GLC +   +++  LL +MKE+G   N+    TL+ A+ + G+ + 
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593

Query: 64  ALSLLDEMLDSRI 76
           +  L+ EM   R 
Sbjct: 594 SAELIREMRSCRF 606


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K D+  Y  +I G+C E + +++   L+ M   G   N +    ++ +    G 
Sbjct: 108 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 167

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL +ML      +VVTF +LI+ LC+ GL+  AID   +MP  G  PN   Y  
Sbjct: 168 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 227

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK+  ++RA    D M  R   PD   Y  L+    K      A+ + N+++  G
Sbjct: 228 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 287

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L  Y +++ GLS+ G  + A  L  EM  +G+ PD I   SL+      G +DEAI
Sbjct: 288 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 347

Query: 241 ELQNEMMGRGL 251
           +  +++ G G+
Sbjct: 348 KFFHDLEGLGI 358



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 112/243 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC +     +  +L +M  +G T N++    L+  + K  +   A+  LD M+
Sbjct: 190 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 249

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+  L+  LCK G V  A++   ++   G  P +  Y  +IDGL K    E
Sbjct: 250 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 309

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  L DEM ++ + PD   Y++L+ G  +     EA+   + +  +G+  +   Y S++
Sbjct: 310 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 369

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL +      A      MI +   P E     L++     G   EA++L NE+  RGL+
Sbjct: 370 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429

Query: 253 SGS 255
             S
Sbjct: 430 KKS 432



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 109/231 (47%)

Query: 21  CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           C ES    +  LL EM+  G   + V    L++   K G   EA+  L+ M     +  V
Sbjct: 93  CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           +T  +++  +C +G   +A      M   G  P+V  +  LI+ LC++  + RA ++ ++
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 212

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           MP     P++ +Y  L+ G+ K +    A+   + M   G   D+  Y +L+  L + G 
Sbjct: 213 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 272

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  A  + +++  +G  P  I   +++    + G  + AI+L +EM  +GL
Sbjct: 273 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 323



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 72/152 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K     L  Y T+I GL    K E +  LL EM+  GL  + +  ++L+    + G+
Sbjct: 283 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 342

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+    ++    I    +T+  ++ GLCKS     AID+   M      P  A YT 
Sbjct: 343 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 402

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           LI+G+  +   + A +L +E+  R ++  ++A
Sbjct: 403 LIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 434



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 70/168 (41%)

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           F   +   CK   V +A+     M + G  P+V  Y  LI+G+CK+  ++ A    + MP
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
                P+   +  ++        + +A  L + M   G    +  +  L+  L R G L 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            A  +  +M   G  P+ +    LL    +   MD AIE  + M+ RG
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 252



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 59/138 (42%)

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           ++  +   CK++ + +A  L DEM  +   PD   Y  LI+G  K     EA+   N M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
             G   ++  +  ++  +   G   +A  L  +M+ +G  P  +    L+     +G + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 238 EAIELQNEMMGRGLLSGS 255
            AI++  +M   G    S
Sbjct: 205 RAIDILEKMPMHGCTPNS 222


>gi|399107194|gb|AFP20361.1| At1g03560-like protein, partial [Capsella grandiflora]
 gi|399107216|gb|AFP20372.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 70  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 185



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 67  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|341605725|gb|AEK82965.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHXMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHXMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI     M D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHXMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L + M + G   D+  Y+ +V GL + G ++EA   F      G+  +   
Sbjct: 65  SGSVEDAIRLLHXMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|341605803|gb|AEK83004.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605805|gb|AEK83005.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605823|gb|AEK83014.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILIXGMFK 205



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y  +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y  +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y  +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 127/247 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y +++ G  + ++ + +K + + M ++G+T      T ++D   K     EA+
Sbjct: 310 VKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAI 369

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL +EM    +    +TF  LIDGLCKSG +    D   +M D     +V  Y++LID L
Sbjct: 370 SLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDAL 429

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +++A  LF +M  +++ PD   YT LIDG  K    K A  +   +   G  LD+
Sbjct: 430 CKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDI 489

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT ++ G  + G   EA  L  +M   G +P+ I    ++   +E+   D+A +L  E
Sbjct: 490 RTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLRE 549

Query: 246 MMGRGLL 252
           M+ RGLL
Sbjct: 550 MIARGLL 556



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 128/250 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y T+I+G CI     ++  LL+EMK   +  +    + L+DA  K G+
Sbjct: 235 MNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGK 294

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +L  M+ + ++  VVT+  L+DG      V+ A   F  M   G+ P V  YT 
Sbjct: 295 MKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTI 354

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   ++ A +LF+EM  +++IP+T  + +LIDG  K        +L ++M +  
Sbjct: 355 MIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRS 414

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y+SL+  L +  HL +A  LF +MI + I PD      L+    + G +  A 
Sbjct: 415 QLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQ 474

Query: 241 ELQNEMMGRG 250
           E+   ++ +G
Sbjct: 475 EVFQHLLIKG 484



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 121/241 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   + + +  L+  ++E  +  + V+   ++D+  K     EA +L  EM 
Sbjct: 177 YGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMN 236

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             +I   VVT+  LI G C  G + EA+     M    ++P+V  ++ LID L K+  ++
Sbjct: 237 AKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMK 296

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +   M K  + PD   Y +L+DGY      K A  + N M + GV   + +YT ++
Sbjct: 297 AAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMI 356

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL +   + EA  LF EM  + ++P+ I   SL+    + G +    +L ++M  R  L
Sbjct: 357 DGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQL 416

Query: 253 S 253
           +
Sbjct: 417 A 417



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 122/254 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I +DL     +I   C   +   S  +L+ + + G   + +  TTL+      GE  +
Sbjct: 98  KGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKK 157

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL   D+++    ++  +++  LI+GLCK G  + AI     + +  + P+V +Y  +ID
Sbjct: 158 ALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIID 217

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK   +  A NL+ EM  + + P+   YT LI G+       EA+ L N M    ++ 
Sbjct: 218 SLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINP 277

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  ++ L+  L + G ++ A+++   M+   + PD +   SL+  ++    +  A  + 
Sbjct: 278 DVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVF 337

Query: 244 NEMMGRGLLSGSKN 257
           N M   G+  G ++
Sbjct: 338 NSMAQSGVTPGVQS 351



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 97/207 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  I+  L    +F  +  L   +   G+T++ V    L++ +   G+ + + S+L  +L
Sbjct: 72  FNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATIL 131

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  V+T   LI GLC  G V++A+ +   +       +   Y  LI+GLCK    +
Sbjct: 132 KRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETK 191

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   + +R + PD   Y  +ID   K++   EA NL + M    +  ++  YT+L+
Sbjct: 192 AAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLI 251

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
           +G    G L EA  L +EM  + I PD
Sbjct: 252 YGFCIMGCLIEAVALLNEMKLKNINPD 278



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 88/181 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK KN+  +   + ++I GLC   +      L+ +M++    A+ +  ++L+DA  K   
Sbjct: 375 MKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCH 434

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L  +M+   I+  + T+ +LIDGLCK G ++ A + F  +   G H ++  YT 
Sbjct: 435 LDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTV 494

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G CK    + A  L  +M     IP+   +  +I    + +   +A  L   M   G
Sbjct: 495 MISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARG 554

Query: 181 V 181
           +
Sbjct: 555 L 555



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 88/196 (44%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++ +  K      A+SL   +    I   +VT  +LI+  C  G +  +      +   G
Sbjct: 75  ILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRG 134

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
            HP+V   T LI GLC +  +++A    D++   +   D  +Y  LI+G  K    K A+
Sbjct: 135 YHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAI 194

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   + E  +  D+  Y  ++  L +   + EA  L+ EM  + I P+ +   +L+   
Sbjct: 195 QLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGF 254

Query: 231 YERGNMDEAIELQNEM 246
              G + EA+ L NEM
Sbjct: 255 CIMGCLIEAVALLNEM 270



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 68/147 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ ++  AD+  Y ++I  LC     + +  L  +M    +  +    T L+D   K G 
Sbjct: 410 MRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGR 469

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +   +L     + + T+ V+I G CK+GL  EA+    +M D G  PN   +  
Sbjct: 470 LKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDI 529

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI 147
           +I  L +K+  ++A  L  EM  R ++
Sbjct: 530 IICALFEKDENDKAEKLLREMIARGLL 556


>gi|341605745|gb|AEK82975.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGFAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|341605703|gb|AEK82954.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605705|gb|AEK82955.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605709|gb|AEK82957.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605813|gb|AEK83009.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605815|gb|AEK83010.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605817|gb|AEK83011.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605819|gb|AEK83012.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 183



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 133/251 (52%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   IK ++  Y  +I  LC + KFE ++ LL +M E GL  N +    L++ Y K G 
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +++ M   ++     T+  LI G CKS  V +A+    +M +  + P+V  Y +
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNS 467

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C+    + A  L   M  R ++PD   YT++ID   K +  +EA +L + + + G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ ++  YT+L+ G  + G + EA ++  +M+ +  LP+ +   +L+      G + EA 
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587

Query: 241 ELQNEMMGRGL 251
            L+ +M+  GL
Sbjct: 588 LLEEKMVKIGL 598



 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 128/243 (52%), Gaps = 1/243 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC   +  ++  L+ EM+E G+  N    T L+D+     +  +A  LL +ML
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   V+T+  LI+G CK G++ +A+D    M    L PN   Y  LI G CK N + 
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VH 444

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + ++M +R ++PD   Y +LIDG  +  +F  A  L + M + G+  D   YTS++
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L +   ++EA  LF  +  +G+ P+ ++  +L+  + + G +DEA  +  +M+ +  L
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564

Query: 253 SGS 255
             S
Sbjct: 565 PNS 567



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 121/247 (48%), Gaps = 1/247 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   Y ++I G C     + +  + +EM   G   N V  T L+     A    EA+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  +M D     TV T+ VLI  LC S    EA++    M + G+ PN+  YT LID L
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C +   E+AR L  +M ++ ++P+   Y ALI+GY K    ++A+++   M    +  + 
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ G  +  ++ +A  + ++M+ R +LPD +   SL+      GN D A  L + 
Sbjct: 429 RTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487

Query: 246 MMGRGLL 252
           M  RGL+
Sbjct: 488 MNDRGLV 494



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 125/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  +   Y  +I G C +S    +  +L++M E  +  + V   +L+D   ++G 
Sbjct: 419 MESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL  M D  +     T+  +ID LCKS  V EA D F  +   G++PNV +YTA
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   ++ A  + ++M  ++ +P++  + ALI G       KEA  L+ +M ++G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   ++  T L+  L + G    A   F +M+  G  PD     + ++ +   G + +A 
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657

Query: 241 ELQNEMMGRGL 251
           ++  +M   G+
Sbjct: 658 DMMAKMRENGV 668



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 107/228 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y ++I  LC   + E++  L   +++ G+  N V+ T L+D Y KAG+
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L++ML        +TF  LI GLC  G ++EA     +M   GL P V+  T 
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L K    + A + F +M      PD   YT  I  Y +     +A ++  +M E G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           V  DL  Y+SL+ G    G    A  +   M   G  P +   +SL+K
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 118/244 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++  L      ++ K +  EM E+ +  N      +++ Y K G   EA   + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ ++    T+  LI G C+   +  A   F  MP  G   N   YT LI GLC    I+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +LF +M   +  P    YT LI      E   EALNL   M E G+  +++ YT L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L      ++AR L  +M+ +G++P+ I   +L+  + +RG +++A+++   M  R L 
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 253 SGSK 256
             ++
Sbjct: 426 PNTR 429



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 114/250 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y ++I G C    F+ +  LLS M + GL  +    T+++D+  K+  
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D +    +   VV +  LIDG CK+G V EA     +M      PN   + A
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    ++ A  L ++M K  + P  +  T LI   LK   F  A +   +M   G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D + YT+ +    R G L +A  +  +M   G+ PD     SL+K + + G  + A 
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692

Query: 241 ELQNEMMGRG 250
           ++   M   G
Sbjct: 693 DVLKRMRDTG 702



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 81/183 (44%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DE  + + ++ +  +  L++ L + GLV E    +  M +  + PN+  Y  +++G CK 
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL 231

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A     ++ +  + PD   YT+LI GY + +    A  + N M   G   +  AY
Sbjct: 232 GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY 291

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T L+ GL     + EA  LF +M      P       L+K         EA+ L  EM  
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351

Query: 249 RGL 251
            G+
Sbjct: 352 TGI 354



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/269 (20%), Positives = 100/269 (37%), Gaps = 54/269 (20%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K D   Y T I   C E +  D++ ++++M+ENG++ +    ++L+  Y   G+
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLID-------------------------------- 88
            + A  +L  M D+  E +  TF  LI                                 
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747

Query: 89  ---------------------GLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLC 126
                                G+C+ G +R A   F  M  + G+ P+  V+ AL+   C
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K      A  + D+M     +P   +   LI G  K    +   ++   + + G   D  
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDEL 867

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           A+  ++ G+ + G ++    LF+ M   G
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNG 896



 Score = 44.7 bits (104), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 1/148 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y  +I G+C       ++ +   M+ N G++ + ++   L+    K  + +EA  ++D+M
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +       + +  VLI GL K G        F  +   G + +   +  +IDG+ K+  +
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDG 159
           E    LF+ M K      +  Y+ LI+G
Sbjct: 883 EAFYELFNVMEKNGCKFSSQTYSLLIEG 910


>gi|341605691|gb|AEK82948.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605825|gb|AEK83015.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 183



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|399107196|gb|AFP20362.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+B   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 70  VEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM B G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 67  SGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 444

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 119/227 (52%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K   +  +L EMK +G+  N V    L+D +      S A+ +  EM    ++  VVT+ 
Sbjct: 195 KMYKADAILKEMKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYN 254

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            LI+GLC +G V EA     +M +  L PN+  + AL++G CK   +++A  LF++MPK+
Sbjct: 255 SLINGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQ 314

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + P+ T Y  LID Y K E+ ++A  L   M   GV  D++ Y  L+ GL R G L+ A
Sbjct: 315 RITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGA 374

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           R    EM  + +  D I    L+     +G M + + L +EM  +GL
Sbjct: 375 RNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGL 421



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 117/238 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  +   +  +I G C +     +  + +EM   G+  N V   +L++     G+
Sbjct: 206 MKADGICPNEVTFNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGK 265

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA +L D+M++S +E  ++T   L++G CK+ +V++A + F  MP   + PNV  Y  
Sbjct: 266 VNEATTLRDQMVNSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNI 325

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK   +E A  L+  M  + + PD + Y  LI G  +    + A N  + M    
Sbjct: 326 LIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKH 385

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
           +  DL  Y  L+  L   G +++   L  EM  +G+ P ++   +++  + + GN+ +
Sbjct: 386 LKADLITYNILMDSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNLRQ 443


>gi|399107212|gb|AFP20370.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 70  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMALFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMALFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMALFKRM 185



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 67  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|341605695|gb|AEK82950.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMMLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCQFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMMLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 90/180 (50%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA +LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMMLFKRM 183



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 132/255 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  D   Y ++I GL    K ++++  L EM ENG   +       +  Y +AGE
Sbjct: 481 MREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGE 540

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A   + EML+  +    V    LI+  CK G V EA   F  M + G+  +   YT 
Sbjct: 541 FASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTV 600

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GL K   +  A  +F EM  + + PD  +Y  LIDG+ K  + ++A ++ + M + G
Sbjct: 601 LMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAG 660

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y  L+ G  R G +++A+ L  EM G+G  P+ +   +++  + + G++ EA 
Sbjct: 661 LTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAF 720

Query: 241 ELQNEMMGRGLLSGS 255
           +L +EM  +GL+  S
Sbjct: 721 QLFDEMKLKGLVPDS 735



 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 5/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+GK I  D+  YGT+I G       + +  +  EM + GLT+N +I   L+  + ++GE
Sbjct: 621 MRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGE 680

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LLDEM         VT+C +IDG CKSG + EA   F  M   GL P+  VYT 
Sbjct: 681 IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTT 740

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C+ N +ERA  +F E  ++     +  + ALI+   K    +   ++ NR+ +  
Sbjct: 741 LVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGS 799

Query: 181 VDL----DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            D     +   Y  ++  L + G+L+ A+ LFH M    ++P  I   SLL  + + G  
Sbjct: 800 FDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRR 859

Query: 237 DEAIELQNEMMGRGL 251
            E   + +E++  G+
Sbjct: 860 SEMFSVFDEVIAAGI 874



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + ++ +Y T+I     +S+F D+  +L EM+E G+  +T    +L+    KA +
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK 505

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S L EM+++  +    T+   I G  ++G    A  Y   M + G+ PN  + T 
Sbjct: 506 MDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTG 565

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  CKK  +  A + F  M ++ ++ D   YT L++G +K+    +A  + + M   G
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ +Y +L+ G S+ G++Q+A  +F EM+  G+  + I+   LL      G +++A 
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685

Query: 241 ELQNEMMGRGL 251
           EL +EM G+G 
Sbjct: 686 ELLDEMSGKGF 696



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 120/237 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K D   YG  I G     +F  +   + EM E G+  N V+CT L++ Y K G+  EA 
Sbjct: 521 FKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEAC 580

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S    M++  I     T+ VL++GL K+G V +A + F  M   G+ P+V  Y  LIDG 
Sbjct: 581 SAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGF 640

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +++A ++FDEM +  +  +   Y  L+ G+ +    ++A  L + M+  G   + 
Sbjct: 641 SKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNA 700

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             Y +++ G  + G L EA  LF EM  +G++PD  +  +L+       +++ AI +
Sbjct: 701 VTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 757



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 120/253 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K +NI      YGT + G+C     + +  ++ EM  +G   N VI TTL+  + +   
Sbjct: 411 IKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSR 470

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +L EM +  I      +  LI GL K+  + EA  +   M + G  P+   Y A
Sbjct: 471 FGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGA 530

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  +      A     EM +  +IP+    T LI+ Y K     EA +    M E G
Sbjct: 531 FISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQG 590

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT L+ GL + G + +A  +FHEM G+GI PD     +L+    + GNM +A 
Sbjct: 591 ILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKAS 650

Query: 241 ELQNEMMGRGLLS 253
            + +EM+  GL S
Sbjct: 651 SIFDEMVQAGLTS 663



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 116/275 (42%), Gaps = 35/275 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC + + ED+K LL EM   GL A+ V  + L+D   K      A  L+ EM+
Sbjct: 283 YNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMV 342

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                +  + +   I  + K G + +A   F  M  FG+ P    Y +LI+G  ++  + 
Sbjct: 343 SHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVR 402

Query: 133 RARNLFDEMPKRDMI-----------------------------------PDTTAYTALI 157
           +   L  E+ KR+++                                   P+   YT LI
Sbjct: 403 KGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLI 462

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
             +L+   F +A+ +   M E G+  D   Y SL+ GLS+   + EAR    EM+  G  
Sbjct: 463 KTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFK 522

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           PD     + +  + E G    A +   EM+  G++
Sbjct: 523 PDAFTYGAFISGYIEAGEFASADKYVKEMLECGVI 557



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 113/248 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  +Y   I  +  E   E +K L   M   G+T       +L++ +F+     +   LL
Sbjct: 349 DPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELL 408

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            E+    I ++  T+   + G+C SG +  A +    M   G  PNV +YT LI    +K
Sbjct: 409 VEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQK 468

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           +    A  +  EM ++ + PDT  Y +LI G  K +   EA +    M E G   D   Y
Sbjct: 469 SRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            + + G    G    A     EM+  G++P+++LC  L+ ++ ++G + EA      M+ 
Sbjct: 529 GAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVE 588

Query: 249 RGLLSGSK 256
           +G+L  +K
Sbjct: 589 QGILGDAK 596



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 45/291 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    + +++ +Y  ++ G C   + E +K LL EM   G   N V   T++D Y K+G+
Sbjct: 656 MVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF----------------- 103
            +EA  L DEM    +      +  L+DG C+   V  AI  F                 
Sbjct: 716 LAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNAL 775

Query: 104 ----------------------GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
                                 G    FG  PN   Y  +ID LCK+  +E A+ LF  M
Sbjct: 776 INWVFKFGKTELTTDMINRLMDGSFDKFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHHM 834

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            K +++P    YT+L++GY K     E  ++ + +   G++ D   Y+ ++    + G  
Sbjct: 835 QKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMT 894

Query: 202 QEARVLFHEMIGRGILPDEI-----LCISLLKKHYERGNMDEAIELQNEMM 247
            +A VL  +M  +  + D        C +LL    + G M+ A ++   M+
Sbjct: 895 TKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMV 945



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 25/265 (9%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKEN---GLTANTVICTTLMDAYFKAGEPSEALSLL 68
           L+G +I G  IE  F D  + +    ++    L  +   C  L+DA  K         + 
Sbjct: 154 LFGILIDGY-IEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVY 212

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVR---------------------EAIDYFGRMP 107
             M++  +   V ++ +LI   C+ G V+                     EA++    M 
Sbjct: 213 KGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMS 272

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             GL P+   Y  LIDGLCK+  +E A++L  EM    +  D  AY+ LIDG LK  +  
Sbjct: 273 CKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNAD 332

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A  L + M   G  +D   Y   +  +S+ G +++A+ LF  MI  G+ P      SL+
Sbjct: 333 AANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLI 392

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
           +  +   N+ +  EL  E+  R ++
Sbjct: 393 EGFFREKNVRKGYELLVEIKKRNIV 417



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 115/286 (40%), Gaps = 49/286 (17%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  D+  Y  +I   C +   + +K +L + +E   TA   +             
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNV------------- 261

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L   M    +  +  ++ +LIDGLCK   + +A      M   GL  +   Y+ 
Sbjct: 262 -DEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320

Query: 121 LIDGL-----------------------------------CKKNCIERARNLFDEMPKRD 145
           LIDGL                                    K+  +E+A+ LFD M    
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFG 380

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P   AY +LI+G+ + ++ ++   L   + +  + +    Y + V G+   G L  A 
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAY 440

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +  EM   G  P+ ++  +L+K   ++    +A+ +  EM  +G+
Sbjct: 441 NIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGI 486



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 23/195 (11%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH--PNVAVYTALIDGLCKKNCIERARNL 137
           V+ F +LIDG  + G + EA+  F    D  L   P++A    L+D L K+N ++   ++
Sbjct: 152 VLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDV 211

Query: 138 FDEMPKRDMIPDTTAYTALI-------------DGYLKHE--------SFKEALNLKNRM 176
           +  M +R+++ D  +Y  LI             D  LK E        +  EAL LK  M
Sbjct: 212 YKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSM 271

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
           +  G+     +Y  L+ GL +   L++A+ L  EM   G+  D +    L+    +  N 
Sbjct: 272 SCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNA 331

Query: 237 DEAIELQNEMMGRGL 251
           D A  L +EM+  G 
Sbjct: 332 DAANGLVHEMVSHGF 346


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 129/251 (51%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAG 59
           M G     D+  Y T+I G C  ++ + +  +  ++K + G + + V  T+++  Y KAG
Sbjct: 232 MSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAG 291

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  EA  LLD+ML   I  T VTF VL+DG  K+G +  A +  G+M  FG  P+V  +T
Sbjct: 292 KMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFT 351

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LIDG C+   + +   L++EM  R M P+   Y+ LI+   K     +A  L  ++   
Sbjct: 352 SLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASK 411

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            +      Y  ++ G  + G + EA V+  EM  +   PD+I    L+  H  +G M EA
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEA 471

Query: 240 IELQNEMMGRG 250
           + + ++M+  G
Sbjct: 472 VSIFHKMVAIG 482



 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 123/245 (50%), Gaps = 1/245 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I G C   K +++ +LL +M   G+    V    L+D Y KAGE   A  + 
Sbjct: 276 DVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIR 335

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+       VVTF  LIDG C+ G V +    +  M   G+ PN   Y+ LI+ LCK+
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKE 395

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N + +AR L  ++  +D+IP    Y  +IDG+ K     EA+ +   M +     D   +
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITF 455

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T L+ G    G + EA  +FH+M+  G  PD+I   SLL    + G   EA  L N++  
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIAH 514

Query: 249 RGLLS 253
           +G ++
Sbjct: 515 KGQIN 519



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 3/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  +  L G ++     + K   +  LL +  E  +    ++  +L++   K   
Sbjct: 129 MKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYE--VEGCCMVVNSLLNTLVKLDR 186

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +E L  +      TF +LI GLC  G   +A++  G M  FG  P++  Y  
Sbjct: 187 VEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNT 246

Query: 121 LIDGLCKKNCIERARNLFDEMPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI G CK N +++A  +FD++       PD   YT++I GY K    +EA  L + M  +
Sbjct: 247 LIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRL 306

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+      +  LV G ++ G +  A  +  +MI  G  PD +   SL+  +   G +++ 
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQG 366

Query: 240 IELQNEMMGRGLLSGS 255
             L  EM  RG+   +
Sbjct: 367 FRLWEEMNARGMFPNA 382



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 1/229 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + ED+  L  E        +T     L+      G+  +A+ LL  M        +VT+ 
Sbjct: 186 RVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYN 245

Query: 85  VLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            LI G CKS  +++A + F  +    G  P+V  YT++I G CK   ++ A  L D+M +
Sbjct: 246 TLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLR 305

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
             + P    +  L+DGY K      A  ++ +M   G   D+  +TSL+ G  R G + +
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQ 365

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              L+ EM  RG+ P+      L+    +   + +A EL  ++  + ++
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDII 414



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 89/244 (36%), Gaps = 69/244 (28%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN--------------------- 114
           I  +  T+ +L   LCK+G+   A   F  M   G+ PN                     
Sbjct: 99  IRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCAT 158

Query: 115 ------------VAVYTALIDGLCKKNCIERARNLFDE---------------------- 140
                         V  +L++ L K + +E A  LF+E                      
Sbjct: 159 ALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCG 218

Query: 141 -------------MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLN 186
                        M     +PD   Y  LI G+ K    K+A  + + + +  G   D+ 
Sbjct: 219 VGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVV 278

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YTS++ G  + G +QEA VL  +M+  GI P  +    L+  + + G M  A E++ +M
Sbjct: 279 TYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKM 338

Query: 247 MGRG 250
           +  G
Sbjct: 339 ISFG 342


>gi|399107214|gb|AFP20371.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+B   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 70  VEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM B G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 185



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 67  SGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+  K D+ +Y TII  LC      ++  L SEM   G++A+ V   TL+  +   G+  
Sbjct: 191 GRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLK 250

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA-------IDYFGRMPDFGLHPNV 115
           EA+ LL+ M+   I   V T+ +L+D LCK G V+EA        D    M D G   +V
Sbjct: 251 EAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADV 310

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             Y++LIDGLCK   ++RA  LF++M  + + P+   +T L+DG  K    K+A  +   
Sbjct: 311 ITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQD 370

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           +   G  L++  Y  ++ G  + G L+EA  +  +M   G +P+     +++   +++  
Sbjct: 371 LLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDE 430

Query: 236 MDEAIELQNEMMGRGLL 252
            D+A +L  +M+ RGLL
Sbjct: 431 NDKAEKLLRQMIARGLL 447



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 117/224 (52%), Gaps = 7/224 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I AD+  Y T+I+G CI  K +++  LL+ M    +  +    T L+DA  K G+
Sbjct: 224 MTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGK 283

Query: 61  PSEA-------LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
             EA         L+DEM D      V+T+  LIDGLCK+G +  AI  F +M D G+ P
Sbjct: 284 VKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRP 343

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           N+  +T L+DGL K   ++ A+ +F ++  +    +   Y  +I+G+ K    +EAL + 
Sbjct: 344 NMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTML 403

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           ++M + G   +   + +++  L +     +A  L  +MI RG+L
Sbjct: 404 SKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 447



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 7/255 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ DL     +I   C   +      +L+++ + G   +TV   TL+      G+  +
Sbjct: 87  KGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKK 146

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL   D++L    ++  V +  LI+G+CK G  R AI    ++      P+V +Y+ +ID
Sbjct: 147 ALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIID 206

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK   +  A  LF EM  + +  D   Y  LI G+      KEA+ L N M    ++ 
Sbjct: 207 ALCKYQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINP 266

Query: 184 DLNAYTSLVWGLSRCGHLQEARV-------LFHEMIGRGILPDEILCISLLKKHYERGNM 236
           D+  YT LV  L + G ++EA+        L  EM  RG   D I   SL+    + G++
Sbjct: 267 DVYTYTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHL 326

Query: 237 DEAIELQNEMMGRGL 251
           D AI L N+M  +G+
Sbjct: 327 DRAIALFNKMKDQGI 341


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  129 bits (323), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 111/206 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC + +  +   +   M + G  AN  I T L+DAY K G  +EA++L + M 
Sbjct: 333 YSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMK 392

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E   VT+ V+++GLCKSG + EA++YF    D  +  N   Y++LIDGL K   ++
Sbjct: 393 GEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVD 452

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F+EM +R    D+  Y ALID   K    +EAL L  RM + G D  +  YT L+
Sbjct: 453 EAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILI 512

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILP 218
            GL +    +EA  L+  MI +GI P
Sbjct: 513 SGLFKEHRNEEALKLWDLMIDKGITP 538



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 113/250 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  D+  Y T+I G C     + +    ++M++  L  + +   TL+ A +  G 
Sbjct: 251 MECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGN 310

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L L  EM +  +E+    + ++I GLCK G   E    F  M   G   NVA+YTA
Sbjct: 311 FDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTA 370

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K   +  A NLF+ M      PD   Y  +++G  K     EA+       +  
Sbjct: 371 LIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNE 430

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V ++   Y+SL+ GL + G + EA   F EM+ RG   D     +L+    + G M+EA+
Sbjct: 431 VAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEAL 490

Query: 241 ELQNEMMGRG 250
            L   M   G
Sbjct: 491 VLFKRMEKEG 500



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 117/250 (46%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K KN    +  Y ++I  L + S F+  + +  E KE G         +L+ ++   G  
Sbjct: 147 KQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMV 206

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            E L +   M +S IE ++ TF  L++GL  S  +  A   F  M    + P+V  Y  +
Sbjct: 207 EELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTM 266

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I G CK    ++A   F +M KR++ PD   Y  LI       +F   L+L   M E G+
Sbjct: 267 IKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGL 326

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           ++  +AY+ ++ GL + G   E   +F  M  +G   +  +  +L+  + + GN++EAI 
Sbjct: 327 EIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAIN 386

Query: 242 LQNEMMGRGL 251
           L   M G G 
Sbjct: 387 LFERMKGEGF 396



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 114/251 (45%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           MK   I+  L  +  ++ GL + S F +S   + E+ E G +  + V   T++  Y KAG
Sbjct: 216 MKESGIEPSLYTFNFLLNGL-VNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAG 274

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              +A+    +M    +E   +T+  LI      G     +  +  M + GL      Y+
Sbjct: 275 NTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYS 334

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I GLCK        ++F+ M K+    +   YTALID Y K+ +  EA+NL  RM   
Sbjct: 335 LVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGE 394

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G + D   Y  +V GL + G L EA   F       +  + +   SL+    + G +DEA
Sbjct: 395 GFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEA 454

Query: 240 IELQNEMMGRG 250
            +   EM+ RG
Sbjct: 455 EKFFEEMVERG 465


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 128/286 (44%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   IK  +  Y T++   C E + + +  LLSEM+E G   N V    L++   K GE
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L++EML+S + V+  T+  LI+G C+ GL  EA D    M +    P ++ Y  
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325

Query: 121 LIDGLCK-----------------------------------KNCIERARNLFDEMPKRD 145
           L+ GLCK                                     CI  A  LFDE+  RD
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P    Y  LI G         AL LK  MT+ G+  D+  YT LV G  + G++  AR
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             F+EM+ +G+ PD     + +    +  +   A  +Q EM+  G 
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +     L  Y T+++GLC   +    +L  S+M ++  T + V   +L+  Y + G 
Sbjct: 311 MVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGC 370

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  L DE+    +  TV+T+  LI GLC  G +  A+     M D GL P++  YT 
Sbjct: 371 ISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTI 430

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G  K   +  AR  F+EM  + + PD  AY   I G +K      A +++  M   G
Sbjct: 431 LVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y   V  L + G+ +EA  L   M+  G++PD +   S++    + G++ +A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 241 ELQNEMMGRGL 251
           E+ NEM+ +G+
Sbjct: 551 EVFNEMLSKGV 561



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 126/290 (43%), Gaps = 35/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG- 59
           +K +++   +  Y T+I GLC+    + +  L  EM + GL  +    T L++  FK G 
Sbjct: 381 LKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGY 440

Query: 60  ----------------------------------EPSEALSLLDEMLDSRIEVTVVTFCV 85
                                             + S A S+ +EML +     V+T+ V
Sbjct: 441 VSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNV 500

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
            +  LC+ G   EA D    M   GL P+   YT++I+G  K   + +AR +F+EM  + 
Sbjct: 501 FVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG 560

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P    YT LI  +   +    A    ++M E  V  ++  Y +++ GL     + EA 
Sbjct: 561 VAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAY 620

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             F EM  +GILP++     L+ +    G  +EA+ L  EM+ R +   S
Sbjct: 621 KYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 111/230 (48%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E+    +K +   M++ G+    V   T++D+Y K G   +AL LL EM +       VT
Sbjct: 193 ENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVT 252

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           + VL++GL K G + +A      M + GL+ +   Y  LI+G C+K     A +L +EM 
Sbjct: 253 YNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMV 312

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
            R   P  + Y  L+ G  K           + M +     D+ ++ SL++G  R G + 
Sbjct: 313 NRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCIS 372

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           EA +LF E+  R ++P  I   +L+      G +D A+ L+ EM  +GL 
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF 422



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 107/222 (48%)

Query: 31  LLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           L+  +M  NGL  +   C  ++         S+A ++   M    I+ TVVT+  ++D  
Sbjct: 166 LVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSY 225

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           CK G V +A++    M + G +PN   Y  L++GL KK  +E+A+ L +EM    +    
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA 285

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LI+G+ +   F EA +L   M        L+ Y +L++GL +   +   R+ F +
Sbjct: 286 YTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSD 345

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           M+     PD +   SLL  +   G + EA  L +E+  R L+
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLV 387



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 97/197 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+  Y   +  LC +  FE++  LL  M  +GL  + V  T++++ + K G 
Sbjct: 486 MLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGH 545

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + +EML   +  +VVT+ VLI       ++  A  YF +M +  +  NV  Y A
Sbjct: 546 LRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNA 605

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLC    ++ A   FDEM ++ ++P+  +YT LI+       ++EAL L   M +  
Sbjct: 606 IINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRK 665

Query: 181 VDLDLNAYTSLVWGLSR 197
           +  D   ++  +  L R
Sbjct: 666 IQPDSFTHSVFLKNLHR 682



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 6/231 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLS---EMKENGLTANTVICTTLMDAYFK 57
           M  K +K D   Y T I G   E K  D+ +  S   EM   G   + +     + A  +
Sbjct: 451 MLSKGLKPDRFAYNTRIVG---EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQ 507

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            G   EA  LL+ M+   +    VT+  +I+G  K+G +R+A + F  M   G+ P+V  
Sbjct: 508 QGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVT 567

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           YT LI     K  ++ A   F +M ++ +  +   Y A+I+G        EA    + M 
Sbjct: 568 YTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEME 627

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           E G+  +  +YT L+      G+ +EA  L+ EM+ R I PD       LK
Sbjct: 628 EKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLK 678


>gi|341605707|gb|AEK82956.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+B   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM B G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 183



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIBEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 122/248 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D   Y  +I G+C   K +++  L +E K   L  N      ++D Y KA +
Sbjct: 619 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 678

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L  E+L   +E+  V +  LI   C++G   EA      M   G+ P  A Y++
Sbjct: 679 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 738

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G+C    +E A+ L DEM K  ++P+   YTALI GY K     + +N+   M+   
Sbjct: 739 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 798

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT ++ G S+ G ++ A  L HEM+G+GI+PD +    L     + G ++E  
Sbjct: 799 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGK 858

Query: 241 ELQNEMMG 248
            L  + +G
Sbjct: 859 LLAEDGVG 866



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 122/249 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N++ +  L  T++ GLC E K  D+  L   + E G  AN V    L+    K G   E
Sbjct: 517 RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQE 576

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ LL +ML+    +  +T+  LI G CK G V E     G M   G+ P+   Y  LI 
Sbjct: 577 AVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIH 636

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G+C+   ++ A NL++E   RD++P+   Y  +IDGY K +  +E   L   +    ++L
Sbjct: 637 GMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLEL 696

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y +L+    R G+  EA  L  +M  +GI P      SL+      G M++A  L 
Sbjct: 697 NSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLI 756

Query: 244 NEMMGRGLL 252
           +EM   GLL
Sbjct: 757 DEMRKEGLL 765



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 121/243 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K   A+L     +I GLC     +++  LL +M E G   + +   TL+    K G+  E
Sbjct: 552 KGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEE 611

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              L  EM+   IE    T+ +LI G+C+ G + EA++ +       L PNV  Y  +ID
Sbjct: 612 GFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMID 671

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK + IE    LF E+  +++  ++  Y  LI  Y ++ +  EA  L + M   G+  
Sbjct: 672 GYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPP 731

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
               Y+SL+ G+   G +++A+ L  EM   G+LP+ +   +L+  + + G MD+ + + 
Sbjct: 732 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVL 791

Query: 244 NEM 246
            EM
Sbjct: 792 QEM 794



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 120/246 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + A L  Y  +I GL    KF ++  +L E  E G T N V+  TL+D Y K G   +AL
Sbjct: 379 VNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDAL 438

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M+   I    VT   +I G CK G + +A      M   G   N   +T +I  L
Sbjct: 439 RIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWL 498

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  +  E A     EM  R+M P+    T L+ G  K     +A+ L  R+ E G   +L
Sbjct: 499 CMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANL 558

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
               +L+ GL + G++QEA  L  +M+ RG + D+I   +L+    + G ++E  +L+ E
Sbjct: 559 VTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGE 618

Query: 246 MMGRGL 251
           M+ +G+
Sbjct: 619 MVKQGI 624



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 121/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + TII  LC+ S+FE +   L EM    +  N  + TTL+    K G+ S+A+ L   +L
Sbjct: 491 FTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL 550

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      +VT   LI GLCK+G ++EA+    +M + G   +   Y  LI G CK+  +E
Sbjct: 551 EKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVE 610

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L  EM K+ + PDT  Y  LI G  +     EA+NL N      +  ++  Y  ++
Sbjct: 611 EGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMI 670

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   ++E   LF E++ + +  + ++  +L++ +   GN  EA +L ++M  +G+
Sbjct: 671 DGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGI 729



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  +     +II G C   + E ++ +L EM   G + N    TT++        
Sbjct: 444 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 503

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL  L EML   +         L+ GLCK G   +A++ + R+ + G   N+    A
Sbjct: 504 FESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 563

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK   ++ A  L  +M +R  + D   Y  LI G  K    +E   L+  M + G
Sbjct: 564 LIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 623

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y  L+ G+ R G L EA  L++E   R ++P+      ++  + +   ++E  
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 683

Query: 241 ELQNEMMGRGL 251
           +L  E++ + L
Sbjct: 684 KLFTELLTQNL 694



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 116/248 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  D+ L+ T I   C   K ED+  L  +M++ G++ N V    L+    K G   E
Sbjct: 307 QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDE 366

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A    ++M+   +  T++T+ VLI+GL K     EA        + G  PN  VY  LID
Sbjct: 367 AFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLID 426

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +  A  +  +M  + + P++    ++I G+ K    ++A  +   M   G  +
Sbjct: 427 GYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSI 486

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +  A+T+++  L      + A     EM+ R + P++ L  +L+    + G   +A+EL 
Sbjct: 487 NPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 546

Query: 244 NEMMGRGL 251
             ++ +G 
Sbjct: 547 FRLLEKGF 554



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 112/241 (46%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y T+I G C      D+  +  +M   G+  N+V   +++  + K G+  +A  +L+EM
Sbjct: 420 VYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEM 479

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L     +    F  +I  LC +     A+ +   M    + PN  + T L+ GLCK+   
Sbjct: 480 LSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKH 539

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  L+  + ++    +     ALI G  K  + +EA+ L  +M E G  LD   Y +L
Sbjct: 540 SDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTL 599

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G  + G ++E   L  EM+ +GI PD      L+      G +DEA+ L NE   R L
Sbjct: 600 ISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDL 659

Query: 252 L 252
           +
Sbjct: 660 V 660



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 112/228 (49%), Gaps = 1/228 (0%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           ++ E S  +   M++ G++ +  + +T ++A+ K G+  +A+ L  +M    +   VVT+
Sbjct: 293 NELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTY 351

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             LI GLCK G + EA  +  +M   G++  +  Y+ LI+GL K      A ++  E  +
Sbjct: 352 NNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLE 411

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           +   P+   Y  LIDGY K  +  +AL ++  M   G++ +     S++ G  + G +++
Sbjct: 412 KGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQ 471

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A  +  EM+ RG   +     +++         + A+    EM+ R +
Sbjct: 472 AECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 519


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 131/282 (46%), Gaps = 35/282 (12%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
            D+  +  ++  LC E K  +++LL  E+ + GL    V   TL++ Y K+G   +   L
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------------- 114
              M+++R+   V T+ VLI+GLCK G + +A   F  M D GL PN             
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342

Query: 115 ----------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
                                 V  Y  LI+GLCK   +  A+ L  EM +R + PD   
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           YT LIDG  K    + AL ++  M + G++LD  A+T+L+ G  R G + EA     EM+
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             GI PD+     ++    ++G++    +L  EM   G + G
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPG 504



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 122/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y  +I GLC E + +D+  L  EM + GL  N V  TTL++ +   G 
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + +  +ML   ++  V+T+  LI+GLCK G +REA      M   GL P+   YT 
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A  +  EM K  +  D  A+TALI G+ +     EA      M E G
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT ++ G  + G ++    L  EM   G +P  +    LL    ++G M  A 
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNAN 525

Query: 241 ELQNEMMGRGLL 252
            L + M+  G++
Sbjct: 526 MLLDAMLNLGVV 537



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 116/229 (50%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           + K   S +  S ++  G   + ++ + LM+AY  +G  S+A+     +    +++   +
Sbjct: 133 KGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHS 192

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
              L D L K  L   A  ++  + D G  P+V  +  L+  LCK++ I  A+ LF E+ 
Sbjct: 193 CGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIG 252

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           KR + P   ++  LI+GY K  +  +   LK  M E  V  D+  Y+ L+ GL + G L 
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLD 312

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +A  LF EM  RG++P+++   +L+  H   G  D  +E+  +M+ +G+
Sbjct: 313 DANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGV 361



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 113/217 (52%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+ + G   +      LM    K  + +EA  L  E+    +  TVV+F  LI+G CKSG
Sbjct: 215 EILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSG 274

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + +       M +  + P+V  Y+ LI+GLCK+  ++ A  LF EM  R ++P+   +T
Sbjct: 275 NLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFT 334

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LI+G+         + +  +M   GV  D+  Y +L+ GL + G L+EA+ L  EM  R
Sbjct: 335 TLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR 394

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G+ PD+     L+    + G+++ A+E++ EM+  G+
Sbjct: 395 GLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGI 431



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 113/233 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C+  + +    +  +M   G+  + +   TL++   K G+  EA  L+ EM 
Sbjct: 333 FTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMT 392

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++    T+ +LIDG CK G +  A++    M   G+  +   +TALI G C++  + 
Sbjct: 393 QRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVI 452

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A     EM +  + PD   YT +I G+ K    K    L   M   G    +  Y  L+
Sbjct: 453 EAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLL 512

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            GL + G ++ A +L   M+  G++PD+I    LL+ H + GN ++  +LQ+E
Sbjct: 513 NGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE 565



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 97/203 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K D+  Y T+I GLC      ++K L+ EM + GL  +    T L+D   K G+
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  EM+   IE+  V F  LI G C+ G V EA      M + G+ P+ A YT 
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G CKK  ++    L  EM     +P    Y  L++G  K    K A  L + M  +G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535

Query: 181 VDLDLNAYTSLVWGLSRCGHLQE 203
           V  D   Y  L+ G  + G+ ++
Sbjct: 536 VVPDDITYNILLEGHCKHGNRED 558


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 124/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + IK  +  Y  II  LC + + +D+    SEM+  G+ AN     +L+ ++   G 
Sbjct: 256 MEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGR 315

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   LL +M+  +I   VVTF  LID L K G + EA D +  M   G+ PN   Y +
Sbjct: 316 WDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNS 375

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    ++ A  + D M  +   PD   Y  LI+G+ K +   + + L  +M+  G
Sbjct: 376 LIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRG 435

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y++L+ G  +   L  A+ +F EM+ +G+ P  +    LL    + G ++EA+
Sbjct: 436 MIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEAL 495

Query: 241 ELQNEM 246
            + ++M
Sbjct: 496 GILDQM 501



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 123/247 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL    TI+ GLC++ +  ++  L++ M  NG   N      +++   K+G  + AL LL
Sbjct: 194 DLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLL 253

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M   +I+  VVT+ ++ID LCK G + +A+ +F  M   G+  NV  Y +LI   C  
Sbjct: 254 RKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSF 313

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              +    L  +M  R + P+   ++ALID  +K     EA +L N M   G++ +   Y
Sbjct: 314 GRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITY 373

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SL++GL     L EA  +   M+ +G  PD      L+    +   +D+ + L  +M  
Sbjct: 374 NSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSL 433

Query: 249 RGLLSGS 255
           RG+++ +
Sbjct: 434 RGMIADT 440



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  DL     +I   C   K   +   + ++ + G   NTV   TL++     G 
Sbjct: 116 MELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGR 175

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L+D M+ S+    ++T   +++GLC    V EA+D   RM   G  PN   Y  
Sbjct: 176 VFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGP 235

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++ +CK      A +L  +M  R + P    YT +ID   K     +AL+  + M   G
Sbjct: 236 ILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKG 295

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y SL+      G   +   L  +MI R I P+ +   +L+    + G + EA 
Sbjct: 296 IKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAK 355

Query: 241 ELQNEMMGRGL 251
           +L NEM+ RG+
Sbjct: 356 DLYNEMITRGI 366



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 116/253 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ +   Y ++I+GLC + + +++  ++  M   G   +      L++ + KA +
Sbjct: 361 MITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQ 420

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + L  +M    +    VT+  LI G C+S  +  A   F  M   G+HP +  Y  
Sbjct: 421 VDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAI 480

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +E A  + D+M K  M  D   Y  +I G        +A +L   +   G
Sbjct: 481 LLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKG 540

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+ +Y  ++ GL +   L EA  LF +M   G  PD     +L++ H    ++  ++
Sbjct: 541 VKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSV 600

Query: 241 ELQNEMMGRGLLS 253
           +L  EM   G  S
Sbjct: 601 QLIEEMKRCGFSS 613



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K IKA++  Y ++I   C   +++D   LL +M    +T N V  + L+D+  K G+
Sbjct: 291 METKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGK 350

Query: 61  PSEALSLLDEMLDSRIEVTVVTF---------------------------C--------V 85
            +EA  L +EM+   IE   +T+                           C        +
Sbjct: 351 LTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNI 410

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+G CK+  V + +  F +M   G+  +   Y+ LI G C+   +  A+ +F EM  + 
Sbjct: 411 LINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQG 470

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P    Y  L+DG   +   +EAL + ++M +  ++LD+  Y  ++ G+     + +A 
Sbjct: 471 VHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAW 530

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            LF  +  +G+  D      +L    +R ++ EA  L  +M
Sbjct: 531 SLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKM 571



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ GLC+E +  ++  L+  M  +    + +   T+++        SEA+ L+  M+
Sbjct: 163 FNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMM 222

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  +    T+  +++ +CKSG    A+D   +M    + P+V  YT +ID LCK   ++
Sbjct: 223 ANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLD 282

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A + F EM  + +  +   Y +LI  +     + +   L   M    +  ++  +++L+
Sbjct: 283 DALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALI 342

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             L + G L EA+ L++EMI RGI P+ I   SL+        +DEA ++ + M+ +G
Sbjct: 343 DSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKG 400



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 104/219 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  Y  +I G C   + +D   L  +M   G+ A+TV  +TL+  + ++ +
Sbjct: 396 MVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRK 455

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  EM+   +   ++T+ +L+DGLC +G + EA+    +M    +  ++ +Y  
Sbjct: 456 LIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNI 515

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G+C  N ++ A +LF  +P + +  D  +Y  ++ G  K  S  EA  L  +M E G
Sbjct: 516 IIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDG 575

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            + D   Y +L+    R   +  +  L  EM   G   D
Sbjct: 576 YEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSD 614



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 82/188 (43%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            L+L  +M    I   + T  ++I+  C+   +  A    G++   G  PN   +  L++
Sbjct: 109 VLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLN 168

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC +  +  A  L D M     +PD      +++G    +   EA++L  RM   G   
Sbjct: 169 GLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQP 228

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y  ++  + + G+   A  L  +M  R I P  +    ++    + G +D+A+   
Sbjct: 229 NQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFF 288

Query: 244 NEMMGRGL 251
           +EM  +G+
Sbjct: 289 SEMETKGI 296



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 79/207 (38%), Gaps = 35/207 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + AD   Y T+I G C   K   +K +  EM   G+    +    L+D     GE
Sbjct: 431 MSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGE 490

Query: 61  PSEALSLLDEMLDSRIEVTV--------------------VTFC---------------V 85
             EAL +LD+M   ++E+ +                      FC               +
Sbjct: 491 LEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNI 550

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           ++ GLCK   + EA   F +M + G  P+   Y  LI    + N I  +  L +EM +  
Sbjct: 551 MLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCG 610

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNL 172
              D +    ++D     E  K  LN+
Sbjct: 611 FSSDASTVKIVMDMLSSGELDKSFLNM 637


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 128/286 (44%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   IK  +  Y T++   C E + + +  LLSEM+E G   N V    L++   K GE
Sbjct: 206 MEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGE 265

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L++EML+S + V+  T+  LI+G C+ GL  EA D    M +    P ++ Y  
Sbjct: 266 LEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNT 325

Query: 121 LIDGLCK-----------------------------------KNCIERARNLFDEMPKRD 145
           L+ GLCK                                     CI  A  LFDE+  RD
Sbjct: 326 LMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRD 385

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P    Y  LI G         AL LK  MT+ G+  D+  YT LV G  + G++  AR
Sbjct: 386 LVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             F+EM+ +G+ PD     + +    +  +   A  +Q EM+  G 
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +     L  Y T+++GLC   +    +L  S+M ++  T + V   +L+  Y + G 
Sbjct: 311 MVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGC 370

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  L DE+    +  TV+T+  LI GLC  G +  A+     M D GL P++  YT 
Sbjct: 371 ISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTI 430

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G  K   +  AR  F+EM  + + PD  AY   I G +K      A +++  M   G
Sbjct: 431 LVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG 490

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y   V  L + G+ +EA  L   M+  G++PD +   S++    + G++ +A 
Sbjct: 491 FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAR 550

Query: 241 ELQNEMMGRGL 251
           E+ NEM+ +G+
Sbjct: 551 EVFNEMLSKGV 561



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 126/290 (43%), Gaps = 35/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG- 59
           +K +++   +  Y T+I GLC+    + +  L  EM + GL  +    T L++  FK G 
Sbjct: 381 LKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGY 440

Query: 60  ----------------------------------EPSEALSLLDEMLDSRIEVTVVTFCV 85
                                             + S A S+ +EML +     V+T+ V
Sbjct: 441 VSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNV 500

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
            +  LC+ G   EA D    M   GL P+   YT++I+G  K   + +AR +F+EM  + 
Sbjct: 501 FVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG 560

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P    YT LI  +   +    A    ++M E  V  ++  Y +++ GL     + EA 
Sbjct: 561 VAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAY 620

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             F EM  +GILP++     L+ +    G  +EA+ L  EM+ R +   S
Sbjct: 621 KYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 111/230 (48%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E+    +K +   M++ G+    V   T++D+Y K G   +AL LL EM +       VT
Sbjct: 193 ENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVT 252

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           + VL++GL K G + +A      M + GL+ +   Y  LI+G C+K     A +L +EM 
Sbjct: 253 YNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMV 312

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
            R   P  + Y  L+ G  K           + M +     D+ ++ SL++G  R G + 
Sbjct: 313 NRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCIS 372

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           EA +LF E+  R ++P  I   +L+      G +D A+ L+ EM  +GL 
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF 422



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 107/222 (48%)

Query: 31  LLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           L+  +M  NGL  +   C  ++         S+A ++   M    I+ TVVT+  ++D  
Sbjct: 166 LVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSY 225

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           CK G V +A++    M + G +PN   Y  L++GL KK  +E+A+ L +EM    +    
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA 285

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LI+G+ +   F EA +L   M        L+ Y +L++GL +   +   R+ F +
Sbjct: 286 YTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSD 345

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           M+     PD +   SLL  +   G + EA  L +E+  R L+
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLV 387



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 97/197 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+  Y   +  LC +  FE++  LL  M  +GL  + V  T++++ + K G 
Sbjct: 486 MLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGH 545

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + +EML   +  +VVT+ VLI       ++  A  YF +M +  +  NV  Y A
Sbjct: 546 LRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNA 605

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLC    ++ A   FDEM ++ ++P+  +YT LI+       ++EAL L   M +  
Sbjct: 606 IINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRK 665

Query: 181 VDLDLNAYTSLVWGLSR 197
           +  D   ++  +  L R
Sbjct: 666 IQPDSFTHSVFLKNLHR 682



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 7/244 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLS---EMKENGLTANTVICTTLMDAYFK 57
           M  K +K D   Y T I G   E K  D+ +  S   EM   G   + +     + A  +
Sbjct: 451 MLSKGLKPDRFAYNTRIVG---EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQ 507

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            G   EA  LL+ M+   +    VT+  +I+G  K+G +R+A + F  M   G+ P+V  
Sbjct: 508 QGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVT 567

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           YT LI     K  ++ A   F +M ++ +  +   Y A+I+G        EA    + M 
Sbjct: 568 YTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEME 627

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E G+  +  +YT L+      G+ +EA  L+ EM+ R I PD     S+  K+  R    
Sbjct: 628 EKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS-FTHSVFLKNLHRDYQV 686

Query: 238 EAIE 241
            A++
Sbjct: 687 HAVQ 690


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 128/244 (52%), Gaps = 2/244 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKF-EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           + I+ D+ +Y +I+ GLC  ++F E  K L   M   G +   V  T+L+    KA +  
Sbjct: 112 RRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMK 171

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A+++ + ML+ +I+ T+V++ V+IDGL K+G V +A      M   G   NV +YT LI
Sbjct: 172 LAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLI 231

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK   ++ A  L+  M +    P+   Y  LID + +++  + AL L + + +    
Sbjct: 232 DGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CP 290

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD+  YT++V GL R   L +AR LF EM   G+  D      LL   +  G  +EA  +
Sbjct: 291 LDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRI 350

Query: 243 QNEM 246
             E+
Sbjct: 351 LEEL 354



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 6/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+  +  Y  II GL    +  D+  ++ EM+  G   N VI TTL+D   K+G 
Sbjct: 180 MLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGF 239

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L   M  S       T+  LID  C++     A+  F  + D+    +VA+YTA
Sbjct: 240 LDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CPLDVAMYTA 298

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           ++ GLC++  ++ AR LF EM    +  DT AY  L+ G  +    +EA  +   +  + 
Sbjct: 299 VVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDP 358

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   +L  Y +++ G      L+   VLF+EM  RGI PD     +L+ +    G +  A
Sbjct: 359 GCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRA 414

Query: 240 IELQNEMMGRGL 251
            +L  EM+  GL
Sbjct: 415 FDLCEEMLASGL 426



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
            F  LID L KS  + +A      M D G+HP+V  +TALI G CK   +ERA  +F EM
Sbjct: 13  AFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEIFQEM 72

Query: 142 PKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCG 199
            K +   PD   Y  LIDGY K      AL L   M  E  +  D+  Y S+V GL R  
Sbjct: 73  IKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSN 132

Query: 200 HLQEA-RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              EA + L   M+ +G  P  +   SL++   +   M  A+ + N M+ R +
Sbjct: 133 RFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKI 185



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 3/201 (1%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
            +L+DA  K+    +A   L+ M D+ I   VVTF  LI G CK+ +V  A + F  M  
Sbjct: 15  ASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEIFQEMIK 74

Query: 109 FG-LHPNVAVYTALIDGLCKKNCIERARNLFDEMP-KRDMIPDTTAYTALIDGYLKHESF 166
                P+  +Y  LIDG CK+  ++RA  L  EM  +R + PD   Y +++DG  +   F
Sbjct: 75  SNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRF 134

Query: 167 KEALN-LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            EA   L   M   G    +  YTSL+ G  +   ++ A  +++ M+ R I P  +    
Sbjct: 135 LEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSV 194

Query: 226 LLKKHYERGNMDEAIELQNEM 246
           ++    + G + +A  +  EM
Sbjct: 195 IIDGLSKAGRVYDAYRVVREM 215



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 11/187 (5%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +Y  ++ GLC E + +D++ L  EM+  G++A+T     L+   F++G   EA  +L
Sbjct: 292 DVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRIL 351

Query: 69  DEMLDSRIEVT-VVTFCVLIDGLC-KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +E+ D    V  ++T+  +I G C +SG+V      F  M   G+ P+ A Y+ALID L 
Sbjct: 352 EELGDDPGCVANLLTYNTVIAGCCLESGMV-----LFYEMRQRGIAPDFATYSALIDRLL 406

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
               I RA +L +EM    + P     + ++   +    +    +L  ++ E+ + +D  
Sbjct: 407 GSGEIRRAFDLCEEMLASGLSPP----SGVLGRVVARLCWSRRGDLAAKLIEMAMAVDDT 462

Query: 187 AYTSLVW 193
           A  SL W
Sbjct: 463 ASFSLPW 469



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 2/139 (1%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           PN   + +LID L K N +  A    + M    + PD   +TALI G+ K+   + A  +
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 173 KNRMTEVG-VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-IGRGILPDEILCISLLKKH 230
              M +      D   Y  L+ G  +   +  A  L  EM + R I PD ++  S++   
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128

Query: 231 YERGNMDEAIELQNEMMGR 249
                  EA +  +E M R
Sbjct: 129 CRSNRFLEAWKFLDETMVR 147


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 132/252 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK D+  Y +++ G C+ ++   +K +L+ M   G+TA       +++ + K   
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKM 365

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L  EM   +I   V+T+  LIDGLCKSG +  A++    M D G  P++  Y++
Sbjct: 366 VDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSS 425

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D LCK + +++A  L  ++  + + P+   YT LIDG  K    ++A N+   +   G
Sbjct: 426 ILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKG 485

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +L +N YT ++ G    G   EA  L  +M     +PD I    ++   +++   D+A 
Sbjct: 486 YNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAE 545

Query: 241 ELQNEMMGRGLL 252
           +L  EM+ RGLL
Sbjct: 546 KLLREMITRGLL 557



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 128/246 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI  D+  +  ++   C E + +++K  L+ M + G+  + V   +LMD Y    E
Sbjct: 271 MTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNE 330

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A S+L+ M    +  TV ++ ++I+G CK  +V +A+  F  M    + PNV  Y +
Sbjct: 331 VNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNS 390

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I  A  L D M  R   PD   Y++++D   K+    +A+ L  ++ + G
Sbjct: 391 LIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG 450

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  YT L+ GL + G L++AR +F +++ +G          +++     G  DEA+
Sbjct: 451 IRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEAL 510

Query: 241 ELQNEM 246
            L ++M
Sbjct: 511 SLLSKM 516



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 126/249 (50%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ D+ +Y TII  +C +    D+  L SEM    +++N V  + L+  +   G+  
Sbjct: 203 GKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLK 262

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L ++M    I   V TF +L+D  CK G V+EA +    M   G+ P++  Y +L+
Sbjct: 263 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLM 322

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C  N +  A+++ + M  R +     +Y  +I+G+ K +   +A+ L   M    + 
Sbjct: 323 DGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIF 382

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y SL+ GL + G +  A  L   M  RG  PD I   S+L    +   +D+AI L
Sbjct: 383 PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIAL 442

Query: 243 QNEMMGRGL 251
             ++  +G+
Sbjct: 443 LIKLKDQGI 451



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 121/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  LL  +    +  + V+ +T++D+  K    ++A  L  EM+
Sbjct: 178 YGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMV 237

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             RI   +VT+  LI G C  G +++AI  F +M    ++P+V  +  L+D  CK+  ++
Sbjct: 238 SRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVK 297

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+N    M K+ + PD   Y +L+DGY        A ++ N M+  GV   + +Y  ++
Sbjct: 298 EAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVI 357

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + +A  LF EM  + I P+ I   SL+    + G +  A+EL + M  RG
Sbjct: 358 NGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRG 415



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + IK +   +  +I   C       +  +L+++ + G   +T+   T +  +   G+
Sbjct: 96  MEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQ 155

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+  D+++     +  V++  LI+GLCK G  R A++   R+    +  +V +Y+ 
Sbjct: 156 IHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYST 215

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID +CK   +  A +L+ EM  R +  +   Y+ALI G+      K+A+ L N+MT   
Sbjct: 216 IIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN 275

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  +  LV    + G ++EA+     M+ +GI PD +   SL+  +     ++ A 
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335

Query: 241 ELQNEMMGRGL 251
            + N M  RG+
Sbjct: 336 SILNTMSHRGV 346



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 107/239 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G I+  L     +     L  +M+  G+  N V    L++ + + G    A S+L ++L
Sbjct: 73  FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKIL 132

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E   +T    I G C  G + +A+++  ++   G H +   Y  LI+GLCK     
Sbjct: 133 KMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 192

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   +  + +  D   Y+ +ID   K ++  +A +L + M    +  ++  Y++L+
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G    G L++A  LF++M    I PD      L+    + G + EA      MM +G+
Sbjct: 253 SGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGI 311



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 90/192 (46%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+SL + +L        + F  ++  L KS      +  F +M   G+ PN   +  LI
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C+   I  A ++  ++ K    PDT      I G+       +ALN  +++  +G  
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD  +Y +L+ GL + G  + A  L   + G+ +  D ++  +++    +  N+++A +L
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDL 232

Query: 243 QNEMMGRGLLSG 254
            +EM+ R + S 
Sbjct: 233 YSEMVSRRISSN 244


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 127/249 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D   + T+I GL + +K  ++  L+ +M + G   + V    +++   K G+   ALS
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M   +IE  VV +  +IDGLCK   + +A   F +M   G+ P+V  Y +LI  LC
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L   M +R + P+   ++ALID ++K     EA  L + M +  +D D+ 
Sbjct: 302 NYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ G      L EA+ +F  MI +   P+ +   +L+K   +   ++E +EL  EM
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421

Query: 247 MGRGLLSGS 255
             RGL+  +
Sbjct: 422 SQRGLVGNT 430



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 127/239 (53%), Gaps = 1/239 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KGK I+AD+ +Y TII GLC     +D+  L ++M+  G+  +     +L+      G  
Sbjct: 248 KGK-IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRW 306

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S+A  LL  M++ +I   VVTF  LID   K G + EA   +  M    + P++  Y++L
Sbjct: 307 SDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+G C  + ++ A+++F+ M  +D  P+   Y  LI G+ K +  +E + L   M++ G+
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +   Y +L+ GL + G    A+ +F +M+  G+ PD I    LL    + G +++A+
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 109/219 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  Y ++I  LC   ++ D+  LLS M E  +  N V  + L+DA+ K G+
Sbjct: 281 METKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGK 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEM+   I+  + T+  LI+G C    + EA   F  M      PNV  Y  
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E    LF EM +R ++ +T  Y  LI G  +      A  +  +M   G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  D+  Y+ L+ GL + G L++A V+F  +    + PD
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + DL  YG ++ GLC     + +  LL +M++  + A+ VI  T++D   K   
Sbjct: 211 MVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L ++M    I   V T+  LI  LC  G   +A      M +  ++PNV  ++A
Sbjct: 271 IDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSA 330

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+  +  A  L+DEM KR + PD   Y++LI+G+  H+   EA ++   M    
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y +L+ G  +   ++E   LF EM  RG++ + +   +L++  ++ G+ D A 
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450

Query: 241 ELQNEMMGRGL 251
           ++  +M+  G+
Sbjct: 451 KIFKKMVSDGV 461



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  DL  Y  +I   C  S+   +  +L +M + G   + V  ++L++ Y  +  
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKR 165

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A++L+D+M++   +   VTF  LI GL       EA+    +M   G  P++  Y A
Sbjct: 166 ISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGA 225

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK+  I+ A +L  +M K  +  D   Y  +IDG  K++   +A  L N+M   G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKG 285

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y SL+  L   G   +A  L   MI R I P+ +   +L+    + G + EA 
Sbjct: 286 IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAE 345

Query: 241 ELQNEMMGRGL 251
           +L +EM+ R +
Sbjct: 346 KLYDEMIKRSI 356



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 122/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  D+  Y ++I G C+  + +++K +   M       N V   TL+  + KA  
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L  EM    +    VT+  LI GL ++G    A   F +M   G+ P++  Y+ 
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +E+A  +F+ + K  M PD   Y  +I+G  K    ++  +L   ++  G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YT+++ G  R G  +EA  LF EM   G LPD     +L++     G+   + 
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA 590

Query: 241 ELQNEMMGRGLL 252
           EL  EM   G +
Sbjct: 591 ELIKEMRSCGFV 602



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 106/219 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   ++  Y T+I G C   + E+   L  EM + GL  NTV   TL+   F+AG+
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+   +   ++T+ +L+DGLCK G + +A+  F  +    + P++  Y  
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   +E   +LF  +  + + P+   YT +I G+ +    +EA  L   M E G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              D   Y +L+    R G    +  L  EM   G + D
Sbjct: 566 TLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 109/227 (48%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +D+  L  EM ++    + V    L+ A  K  +    +SL + M + RI   + ++ 
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI+  C+   +  A+   G+M   G  P++   ++L++G C    I  A  L D+M + 
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PDT  +  LI G   H    EA+ L ++M + G   DL  Y ++V GL + G +  A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L  +M    I  D ++  +++    +  ++D+A  L N+M  +G+
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGI 286


>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
 gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
          Length = 410

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 124/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ +L  Y  ++   C   +F+ ++LL  EM   G+  N V    L+    + G+
Sbjct: 99  MRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGK 158

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L + M    I  ++VTF +LIDG  K+G +  A+ +F +M   GL P+V  Y  
Sbjct: 159 LKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNE 218

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   I  A   F +M +R + P    YT LI  + K      A  + + M + G
Sbjct: 219 LIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAG 278

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +++D+ +Y  L+  L   G +  AR LF  M  +G+ P+ +L   ++  +   G+  +A+
Sbjct: 279 LEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKAL 338

Query: 241 ELQNEMMGRGLL 252
            L  EM   GL+
Sbjct: 339 RLIMEMRKSGLI 350



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 111/250 (44%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K  +   D+     ++ G C      +++ +   M   G+T N V  T L+  YF  G+ 
Sbjct: 30  KSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQR 89

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
               +L+ EM    +E  + T+  L+   C++G  + A   F  MP  G+  NV  Y  L
Sbjct: 90  EMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNIL 149

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I GLC+   ++ A  LF+ M +  + P    +  LIDGY K      AL+  N+M   G+
Sbjct: 150 IAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGL 209

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
              +  Y  L+ G  R   +  A   F +M  R + P ++    L+    +   MD A E
Sbjct: 210 QPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFE 269

Query: 242 LQNEMMGRGL 251
           + +EM   GL
Sbjct: 270 MLSEMEKAGL 279



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 101/216 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  ++  Y  +I GLC   K +D+  L   M+  G+  + V    L+D Y KAG+ S 
Sbjct: 137 KGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSN 196

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL   ++M  + ++ +VVT+  LI G C++  +  AI  F  M +  L P    YT LI 
Sbjct: 197 ALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIG 256

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
              K+N ++RA  +  EM K  +  D  +Y  L+           A  L   M   GV  
Sbjct: 257 AFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKP 316

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +   Y  +++G  R G   +A  L  EM   G++P+
Sbjct: 317 NNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPN 352



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 60/124 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  YG ++  LC+E K   ++ L   M   G+  N V+   ++  Y + G 
Sbjct: 274 MEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGS 333

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L+ EM  S +   V ++C+ I  LC  G  +EA    G M D GL  + ++   
Sbjct: 334 SYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRV 393

Query: 121 LIDG 124
           L D 
Sbjct: 394 LFDA 397


>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
          Length = 374

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 123/250 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  ++ +   YG +I G C   + E +++LL++M+  G+  N +I  T++D Y + G   
Sbjct: 101 GNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVD 160

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL +   M    +E+ + T+  L  GLC+   + EA      M + G+ PN   YT LI
Sbjct: 161 DALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLI 220

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
              CK   +  AR LF EM ++   P    Y  +I GY K  S +EA   +  M + G  
Sbjct: 221 SIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFV 280

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y SLV G    G +  A  LF EM  RG  P+ +   +L+    + G  + A +L
Sbjct: 281 PDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQL 340

Query: 243 QNEMMGRGLL 252
            ++M+  GL+
Sbjct: 341 YDDMLKAGLI 350



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 103/195 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y T+  GLC  ++ +++K LL  M E G+  N V  TTL+  + K G+
Sbjct: 169 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGD 228

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM +     +VVT+ V+I G  K G +REA  +   M   G  P+V  Y +
Sbjct: 229 MVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYAS 288

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    ++ A  LF+EM +R   P+  AYTALI G  K    + A  L + M + G
Sbjct: 289 LVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAG 348

Query: 181 VDLDLNAYTSLVWGL 195
           +  D + Y++LV  L
Sbjct: 349 LIPDDSLYSALVGSL 363



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 104/219 (47%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L E   NG+  N      L++ + K G+   A  LL +M    + +  + F  +IDG C
Sbjct: 95  VLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYC 154

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G+V +A+     M   G+  ++  Y  L  GLC+ N ++ A+ L   M +  ++P+  
Sbjct: 155 RKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYV 214

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LI  + K     EA  L   M E G    +  Y  ++ G ++ G ++EA     EM
Sbjct: 215 TYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEM 274

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +G +PD     SL+  H   G +D A++L  EM  RG
Sbjct: 275 EKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRG 313



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 25/267 (9%)

Query: 11  PLYGTIIW-GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           PL  +++  GLC   + +D++ LL +M  +G++ N +   +L+D Y +  +      +L+
Sbjct: 14  PLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILE 73

Query: 70  EMLDSRIEVTV------------------------VTFCVLIDGLCKSGLVREAIDYFGR 105
            M +  IE TV                         T+ VLI+G CK G +  A      
Sbjct: 74  IMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLAD 133

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M   G+  N  ++  +IDG C+K  ++ A  +   M K  +  D   Y  L  G  +   
Sbjct: 134 MQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNR 193

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             EA  L + M E+GV  +   YT+L+    + G + EAR LF EM  +G  P  +    
Sbjct: 194 LDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNV 253

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLL 252
           ++  + ++G++ EA   + EM  +G +
Sbjct: 254 MIHGYAKKGSIREAERFRKEMEKKGFV 280



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 24/233 (10%)

Query: 42  TANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS---GLVRE 98
           + + +  + ++D   K+G   +A  LLD+M    + +  + +  L+D   +    G V+E
Sbjct: 11  SVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQE 70

Query: 99  AIDYF--------------GRMPDF-------GLHPNVAVYTALIDGLCKKNCIERARNL 137
            ++                G  P         G+ PN   Y  LI+G CK   +E A  L
Sbjct: 71  ILEIMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEML 130

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSR 197
             +M  + +  +   +  +IDGY +     +AL +K  M ++GV+LD+  Y +L  GL R
Sbjct: 131 LADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCR 190

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              L EA+ L H MI  G++P+ +   +L+  H + G+M EA  L  EM  +G
Sbjct: 191 VNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 243



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 55/129 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K     +  Y  +I G   +    +++    EM++ G   +     +L+  +   G+
Sbjct: 239 MAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGK 298

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L +EM     E  VV +  LI GL K G    A   +  M   GL P+ ++Y+A
Sbjct: 299 VDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSA 358

Query: 121 LIDGLCKKN 129
           L+  L   N
Sbjct: 359 LVGSLHTDN 367


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 118/250 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK D  +Y  ++ GLC E K E+++LL  +M +  +  N V   TL++   KA  
Sbjct: 140 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 199

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EM       T V++  LIDG CK   +  A D F +M      PNV  YT 
Sbjct: 200 IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 259

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGL K   ++ A  + D M K+ + P+   Y+ LIDG+ K     EA  L  +M   G
Sbjct: 260 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 319

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  L+  L R   L++A  LF  M  R   P  +   +LL+       +D A 
Sbjct: 320 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 379

Query: 241 ELQNEMMGRG 250
            L  EM+ +G
Sbjct: 380 RLYAEMIAKG 389



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 117/241 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   YG I+  LC   + +D+   + EM   G+  +  I   ++    +  +  EA  L 
Sbjct: 113 DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 172

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M+  RI   VVT+  LI+GLCK+  +  A + F  M   G  P    Y  LIDG CKK
Sbjct: 173 EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 232

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A+++FD+M + + +P+   YT LIDG  K    + A  + + M + GV  ++  Y
Sbjct: 233 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 292

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + L+ G  +   + EA  L  +M+ +GI P  +    LL        +++A +L   M  
Sbjct: 293 SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ 352

Query: 249 R 249
           R
Sbjct: 353 R 353



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 115/246 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T+I GLC   + E +  L  EM   G     V   TL+D + K  +
Sbjct: 175 MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 234

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + D+M+ S     VVT+  LIDGL KSG V+ A +    M   G+ PNVA Y+ 
Sbjct: 235 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 294

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   ++ A  L ++M  + + P    Y  L++   + +  ++A  L   M +  
Sbjct: 295 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  Y +L+  L     L  A  L+ EMI +G  PD I   +L       G + EA 
Sbjct: 355 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 414

Query: 241 ELQNEM 246
           EL  +M
Sbjct: 415 ELMEKM 420



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K     Y TII  LC  ++ E+++ L+ +M       + +    +++   K   
Sbjct: 71  MRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKR 129

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+ ++EM    I+     +  ++ GLC+   V EA   F +M    ++PNV  Y  
Sbjct: 130 IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNT 189

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   IE A  LF EM  +  +P   +Y  LIDG+ K +    A ++ ++M    
Sbjct: 190 LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN 249

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YT+L+ GLS+ G +Q A  +   M+ +G+ P+      L+    +   +DEA 
Sbjct: 250 CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 309

Query: 241 ELQNEMMGRGL 251
           +L  +M+ +G+
Sbjct: 310 KLLEQMVTQGI 320



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 1/235 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+  G     + E  K +   M E G T        L+    K G   EA  LL  M 
Sbjct: 13  FNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMR 72

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             R +   + +  +I+ LCK   V EA +   +M  +   P+   Y  +++ LCK   I+
Sbjct: 73  LKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRID 131

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A    +EM  R + PD   Y  ++ G  + E  +EA  L  +M +  ++ ++  Y +L+
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLI 191

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            GL +   ++ A  LF EM G+G +P E+   +L+    ++ ++  A ++ ++M+
Sbjct: 192 NGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 36/213 (16%)

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG------------------------ 110
           R+     TF  + DG  K+G + +  + +  M + G                        
Sbjct: 5   RVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEA 64

Query: 111 ---LHP--------NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
              LH             Y+ +I+ LCK N +E AR L ++M  R   PD   Y  +++ 
Sbjct: 65  YKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVER 123

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K +   +AL     M   G+  D   Y  ++ GL +   ++EAR+LF +M+ + I P+
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 183

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +   +L+    +   ++ A EL  EM G+G +
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYV 216



 Score = 37.7 bits (86), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 31/71 (43%)

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M  R +IP    +  + DG+ K    ++   +   M E G  L  + Y  L+  L + G+
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 201 LQEARVLFHEM 211
             EA  L H M
Sbjct: 61  FDEAYKLLHTM 71


>gi|399107198|gb|AFP20363.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 70  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 67  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 119/237 (50%), Gaps = 4/237 (1%)

Query: 19  GLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR-- 75
           GLC   +  ++  +L+  M E G T + V   TL+  +       EAL LL  M DS+  
Sbjct: 138 GLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR 197

Query: 76  -IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
                VV++  +I+G    G V +A + F  M D G+ PNV  YT +IDGLCK   ++RA
Sbjct: 198 SCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRA 257

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             +F +M  + + PD   Y  LI GYL    +KE + +   M+  G+  D   Y SL+  
Sbjct: 258 EGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNY 317

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L   G  +EAR  F  MI +GI P+  +   L+  +  +G + E  +L N M+  GL
Sbjct: 318 LCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGL 374



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 126/254 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK ++ +YG +I G   +    +   LL+ M ENGL+ +  I   +  AY K   
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAM 393

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + ++M    +   VV F  LID LCK G V +A+  F +M + G+ PN+ V+ +
Sbjct: 394 IDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNS 453

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC  +  E+A+  + EM  + + PD   +  ++          +A  L + M  VG
Sbjct: 454 LVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVG 513

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ +YT+L+ G    G + EA      M+  G+ PDE    +LL  +   G +D+A 
Sbjct: 514 TRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY 573

Query: 241 ELQNEMMGRGLLSG 254
            +  EM+  G+  G
Sbjct: 574 GVFREMLRNGITPG 587



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 38/281 (13%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKEN---GLTANTVICTTLMDAYFKAGEPSEAL 65
           D+  Y T++ G C E + E++  LL  M ++       N V   T+++ +F  G+  +A 
Sbjct: 164 DVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAY 223

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG- 124
           +L  EM+D  I+  VVT+  +IDGLCK+ +V  A   F +M D G+ P+   Y  LI G 
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283

Query: 125 ----------------------------------LCKKNCIERARNLFDEMPKRDMIPDT 150
                                             LC       AR  FD M ++ + P+ 
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNV 343

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LI GY    +  E  +L N M E G+  D + +  +    ++   + EA  +F++
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  +G+ PD +   +L+    + G +D+A+   N+MM  G+
Sbjct: 404 MKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGV 444



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ ++  Y T+I GLC     + ++ +  +M + G+  +      L+  Y   G+
Sbjct: 229 MMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGK 288

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + +L+EM    ++    T+  L++ LC +G  REA  +F  M   G+ PNVA+Y  
Sbjct: 289 WKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGI 348

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G   K  +    +L + M +  + PD   +  +   Y K     EA+++ N+M + G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  + +L+  L + G + +A + F++M+  G+ P+  +  SL+         ++A 
Sbjct: 409 LSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAK 468

Query: 241 ELQNEMMGRGL 251
           E   EM+ +G+
Sbjct: 469 EFYFEMLNQGI 479



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 116/246 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K D   Y  +I G     K+++   +L EM  +GL  +     +L++     G 
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA    D M+   I+  V  + +LI G    G + E  D    M + GL P+  ++  
Sbjct: 324 CREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +     KK  I+ A ++F++M ++ + PD   + ALID   K     +A+   N+M   G
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEG 443

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  + SLV+GL      ++A+  + EM+ +GI PD +   ++L     +G + +A 
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQ 503

Query: 241 ELQNEM 246
            L + M
Sbjct: 504 RLIDLM 509



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 115/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K D   YG+++  LC   +  +++     M   G+  N  I   L+  Y   G 
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGA 358

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SE   LL+ M+++ +      F ++     K  ++ EA+  F +M   GL P+V  + A
Sbjct: 359 LSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGA 418

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++ A   F++M    + P+   + +L+ G    + +++A      M   G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  + +++  L   G + +A+ L   M   G  PD I   +L+  H   G +DEA 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAA 538

Query: 241 ELQNEMMGRGL 251
           +  + M+  GL
Sbjct: 539 KSLDVMLSVGL 549



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 114/239 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    + D+  Y T+I G C+  + +++   L  M   GL  +     TL+  Y +AG 
Sbjct: 509 MERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +  EML + I   VVT+  ++ GL  +    EA + +  M   G   N+ +Y  
Sbjct: 569 IDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNI 628

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GL K NC++ A  LF  +  +D   + T +  +I    K    ++A++L   ++  G
Sbjct: 629 ILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           +  D+  Y  +   L   G+L+E   LF  M   G  P+  +  +L+++   RG++  A
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 111/252 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++ ++ ++++GLC   K+E +K    EM   G+  + V   T++      G+
Sbjct: 439 MMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQ 498

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+D M        V+++  LI G C  G + EA      M   GL P+   Y  
Sbjct: 499 VMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNT 558

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+   I+ A  +F EM +  + P    Y+ ++ G      F EA  L   M   G
Sbjct: 559 LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y  ++ GLS+   + EA  LF  +  +    +      ++   ++ G  ++A+
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAM 678

Query: 241 ELQNEMMGRGLL 252
            L   +   GL+
Sbjct: 679 HLFATISSYGLV 690



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 4/215 (1%)

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           +T +    + L+  + + G      +    +L S   V  +    L+ GLC +  +REA+
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 101 DYF-GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK---RDMIPDTTAYTAL 156
           D    RMP+ G  P+V  Y  L+ G C +   E A  L   M     R   P+  +Y  +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           I+G+       +A NL   M + G+  ++  YT+++ GL +   +  A  +F +MI +G+
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            PD      L+  +   G   E + +  EM   GL
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGL 304



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 112/256 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D+  + TI+  LC + +   ++ L+  M+  G   + +  TTL+  +   G 
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGR 533

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   LD ML   ++    T+  L+ G C++G + +A   F  M   G+ P V  Y+ 
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GL        A+ L+  M       +   Y  +++G  K+    EA  L   +    
Sbjct: 594 ILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKD 653

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             L++  +  ++  L + G  ++A  LF  +   G++PD      + +   E G ++E  
Sbjct: 654 FQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFD 713

Query: 241 ELQNEMMGRGLLSGSK 256
           +L + M   G    S+
Sbjct: 714 DLFSAMEKSGTTPNSR 729



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 81/185 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TI+ GL    +F ++K L   M  +G   N  I   +++   K     EA  L   + 
Sbjct: 591 YSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLC 650

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               ++ + TF ++I  L KSG   +A+  F  +  +GL P+V  Y  + + L ++  +E
Sbjct: 651 SKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLE 710

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
              +LF  M K    P++    AL+   L       A    +++ E    L+ +    L+
Sbjct: 711 EFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLI 770

Query: 193 WGLSR 197
             LSR
Sbjct: 771 SLLSR 775



 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/167 (20%), Positives = 69/167 (41%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y  I+ GL   +  +++  L   +              ++ A FK+G   +A+ L 
Sbjct: 622 NIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLF 681

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    +   V T+C++ + L + G + E  D F  M   G  PN  +  AL+  L  +
Sbjct: 682 ATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHR 741

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             I RA     ++ +++   + +    LI    + E    A +L  +
Sbjct: 742 GDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEK 788


>gi|341605697|gb|AEK82951.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 105/198 (53%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMMLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMMLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 90/180 (50%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA +LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMMLFKRM 183



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|341606831|gb|AEK83518.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606833|gb|AEK83519.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606835|gb|AEK83520.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606839|gb|AEK83522.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606841|gb|AEK83523.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606843|gb|AEK83524.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606845|gb|AEK83525.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606847|gb|AEK83526.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606849|gb|AEK83527.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606851|gb|AEK83528.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606853|gb|AEK83529.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606855|gb|AEK83530.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606857|gb|AEK83531.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606859|gb|AEK83532.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606861|gb|AEK83533.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606863|gb|AEK83534.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606865|gb|AEK83535.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606867|gb|AEK83536.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606871|gb|AEK83538.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606873|gb|AEK83539.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606875|gb|AEK83540.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606877|gb|AEK83541.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606879|gb|AEK83542.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606881|gb|AEK83543.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606883|gb|AEK83544.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606885|gb|AEK83545.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606887|gb|AEK83546.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606889|gb|AEK83547.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606891|gb|AEK83548.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606893|gb|AEK83549.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606895|gb|AEK83550.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606897|gb|AEK83551.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606899|gb|AEK83552.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606901|gb|AEK83553.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606903|gb|AEK83554.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606905|gb|AEK83555.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606907|gb|AEK83556.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606909|gb|AEK83557.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606911|gb|AEK83558.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606913|gb|AEK83559.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606915|gb|AEK83560.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606917|gb|AEK83561.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606919|gb|AEK83562.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606921|gb|AEK83563.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606923|gb|AEK83564.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606925|gb|AEK83565.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606927|gb|AEK83566.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606929|gb|AEK83567.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606931|gb|AEK83568.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606933|gb|AEK83569.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606935|gb|AEK83570.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606937|gb|AEK83571.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606939|gb|AEK83572.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606941|gb|AEK83573.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606943|gb|AEK83574.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606945|gb|AEK83575.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606947|gb|AEK83576.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606949|gb|AEK83577.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606951|gb|AEK83578.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606953|gb|AEK83579.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606957|gb|AEK83581.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606959|gb|AEK83582.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606961|gb|AEK83583.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606963|gb|AEK83584.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606965|gb|AEK83585.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606967|gb|AEK83586.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606969|gb|AEK83587.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606971|gb|AEK83588.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606973|gb|AEK83589.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606975|gb|AEK83590.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 208

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 5   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 65  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 184

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 185 GCDQTVYTYTILISGMFK 202



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 87/180 (48%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++  
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 120

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L   M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 180



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 180



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 2   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 62  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMF 121

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 122 YSSLIDGLGKAGRIDEAERLFEEMSEKG 149


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 131/257 (50%), Gaps = 2/257 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  DL  Y  +I GLC   K E++K+LL +M E G+  N       ++ Y K+GE
Sbjct: 512 MIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     +ML S I    V + +LI G C  G   EA+  F  M + GL P++  Y+A
Sbjct: 572 IQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSA 631

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L K    + A  +F +  K  ++PD   Y +LI G+ K    ++A  L + M   G
Sbjct: 632 IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691

Query: 181 VDLDLNAYTSLV--WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
           ++ ++  Y +L+  +G  + G+L EA  LF EMI +GI PD  +   L+    + GN+++
Sbjct: 692 INPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEK 751

Query: 239 AIELQNEMMGRGLLSGS 255
           A+ L +E   + + S S
Sbjct: 752 ALSLFHEAQQKSVGSLS 768



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 120/216 (55%), Gaps = 1/216 (0%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E  +  +    T ++ A+ K G+  +   +L EM +   +  + T+   I GLC++G 
Sbjct: 233 MVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGA 291

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           V EA++    M + GL P+   YT L+DG CK+   + A+ +F+ MP   + P+   YTA
Sbjct: 292 VDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTA 351

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LIDG++K  + +EAL +K+ M   G+ L++  Y +++ G+++ G + +A  LF+EM+  G
Sbjct: 352 LIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAG 411

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I PD      L+  + +  +M +A EL  EM  R L
Sbjct: 412 IEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKL 447



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +      Y  +I GLC  S  + +  +L +M  NG+  N  +  TL+ AY +   
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ LL  M+ + +   +  +  LI GLC++  V EA      M + G+ PN   Y A
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+   K   I+ A   F +M    ++P+   YT LI G+    +  EAL+    M E G
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ AY++++  LS+ G  +EA  +F + +  G++PD  L  SL+    + G++++A 
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681

Query: 241 ELQNEMMGRGL 251
           +L +EM+  G+
Sbjct: 682 QLYDEMLHNGI 692



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 116/249 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K +L  Y   I GLC     +++  +   M E GL  +    T L+D + K     E
Sbjct: 270 KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  + + M  S +     T+  LIDG  K G + EA+     M   GL  NV  Y A+I 
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G+ K   + +A +LF+EM    + PDT  Y  LIDGYLK     +A  L   M    +  
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
               Y+ L+ GL     LQ+A  +  +MI  G+ P+  +  +L+K + +    + AIEL 
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509

Query: 244 NEMMGRGLL 252
             M+  G+L
Sbjct: 510 KIMIANGVL 518



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 2/248 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K ++ +YGT+I     ES++E +  LL  M  NG+  +      L+    +A +  EA 
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL +M +  I+    T+   I+   KSG ++ A  YF  M   G+ PN  +YT LI G 
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGH 601

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A + F  M ++ +IPD  AY+A+I    K+   KEA+ +  +  + GV  D+
Sbjct: 602 CDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK--HYERGNMDEAIELQ 243
             Y SL+ G  + G +++A  L+ EM+  GI P+ ++  +L+    + + GN+ EA +L 
Sbjct: 662 FLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLF 721

Query: 244 NEMMGRGL 251
           +EM+ +G+
Sbjct: 722 DEMISKGI 729



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 127/275 (46%), Gaps = 35/275 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G   E   E++  +  EM   GL  N V    ++    KAGE ++A+SL +EML
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + IE    T+ +LIDG  KS  + +A +    M    L P+   Y+ LI GLC  + ++
Sbjct: 409 MAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + D+M +  + P+   Y  LI  Y++   ++ A+ L   M   GV  DL  Y  L+
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 193 WGLSRCGHLQEARVL-----------------------------------FHEMIGRGIL 217
            GL R   ++EA++L                                   F +M+  GI+
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           P+ ++   L+K H + GN  EA+     M+ +GL+
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLI 623



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 1/227 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y  ++ G C + + +++KL+   M  +GL  N    T L+D + K G 
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL + DEM+   +++ VVT+  +I G+ K+G + +A+  F  M   G+ P+   Y  
Sbjct: 362 IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNL 421

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K + + +A  L  EM  R + P    Y+ LI G       ++A  + ++M   G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           V  ++  Y +L+    +    + A  L   MI  G+LPD + C + L
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD-LFCYNCL 527



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 127/321 (39%), Gaps = 71/321 (22%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMD--AYFKAGEPSE 63
           +  D+ LY ++I G C E   E +  L  EM  NG+  N V+  TL++   Y K+G  +E
Sbjct: 657 VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTE 716

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDG---------------------------------- 89
           A  L DEM+   I      +C+LIDG                                  
Sbjct: 717 AFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDS 776

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
            CK G V EA + F  M D  L PN+  YT LID   K   +E A  LF +M  R++IP+
Sbjct: 777 FCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 836

Query: 150 TTAYTALI-----------------------------------DGYLKHESFKEALNLKN 174
           T  YT+L+                                     Y K     EAL L N
Sbjct: 837 TLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLN 896

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
           +    G+ L+ + + +L++ L +   +     L  EM    +      C +LL   Y+ G
Sbjct: 897 KSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSG 956

Query: 235 NMDEAIELQNEMMGRGLLSGS 255
           N DEA ++   M   G +  S
Sbjct: 957 NEDEASKVLGVMQRLGWVPTS 977



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 1/209 (0%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +N  +    +D +   G  +EA S+    +      T++    L+  L K+ ++      
Sbjct: 170 SNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKV 229

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +G M +  + P+V  YT +I   CK   + + + +  EM K +  P+   Y A I G  +
Sbjct: 230 YGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQ 288

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             +  EAL +K  M E G+  D + YT LV G  +    +EA+++F  M   G+ P+   
Sbjct: 289 TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+    + GN++EA+ +++EM+ RGL
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGL 377



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 77/180 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  ++  Y  +I         E+++ L  +M+   +  NT+  T+L+ +Y + G 
Sbjct: 793 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 852

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + +SL  +M    I    + + V+    CK G   EA+    +    G+     V+ A
Sbjct: 853 RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDA 912

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK+  I     L  EM K ++   +     L+ G+ K  +  EA  +   M  +G
Sbjct: 913 LIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLG 972



 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 51/123 (41%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M+  G+  + +    +  AY K G+  EAL LL++ L   I++    F  LI  LC
Sbjct: 859 LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC 918

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K   +   ++    M    L  +      L+ G  K    + A  +   M +   +P + 
Sbjct: 919 KEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSL 978

Query: 152 AYT 154
           + T
Sbjct: 979 SLT 981


>gi|341606837|gb|AEK83521.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606869|gb|AEK83537.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606977|gb|AEK83591.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606979|gb|AEK83592.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606981|gb|AEK83593.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606983|gb|AEK83594.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606985|gb|AEK83595.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606987|gb|AEK83596.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606989|gb|AEK83597.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606991|gb|AEK83598.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606993|gb|AEK83599.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606995|gb|AEK83600.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606997|gb|AEK83601.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341606999|gb|AEK83602.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341607001|gb|AEK83603.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341607003|gb|AEK83604.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341607005|gb|AEK83605.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341607007|gb|AEK83606.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341607009|gb|AEK83607.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341607011|gb|AEK83608.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341607013|gb|AEK83609.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
 gi|341607015|gb|AEK83610.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 207

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 5   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 65  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 184

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 185 GCDQTVYTYTILISGMFK 202



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 87/180 (48%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++  
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 120

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L   M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 180



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 180



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 2   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 62  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMF 121

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 122 YSSLIDGLGKAGRIDEAERLFEEMSEKG 149


>gi|341605731|gb|AEK82968.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605733|gb|AEK82969.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605735|gb|AEK82970.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|341605689|gb|AEK82947.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+  +++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKXDVVTYSXVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M       D   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKXDVVTYSXVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +BEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G   +V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKXDVVTYSXVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRM 183



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKXDVVTYSXVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 118/242 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+    T+I GLC   + +D++ LL EM+ NG   + V  T L+  + KA +  ++L+  
Sbjct: 480 DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFF 539

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EMLD     TV+T+ ++ID LCKS  VR+       M + G+ P+  VYT++IDGLCK 
Sbjct: 540 SEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKS 599

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           +  + A  L+  M +    P    Y  L+D   K     EA++L   M   G   D   Y
Sbjct: 600 DSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTY 659

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            S+  G  +     +A  LF  M  RG  P   +   LL K      MD+A+E+  E + 
Sbjct: 660 NSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALE 719

Query: 249 RG 250
            G
Sbjct: 720 AG 721



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 116/242 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y +I+ GLC  S+ +++  +   ++  G   + V C+TL+D   K+    +A  LL
Sbjct: 445 DVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLL 504

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM  +     VV + +LI G CK+  + +++ +F  M D G  P V  Y+ +ID LCK 
Sbjct: 505 REMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKS 564

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +     L   M +R + PD   YT++IDG  K +S+ EA  L   M + G    +  Y
Sbjct: 565 ARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTY 624

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             LV  L +   L EA  L   M   G LPD +   S+    ++    D+A  L   M  
Sbjct: 625 NVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKS 684

Query: 249 RG 250
           RG
Sbjct: 685 RG 686



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 118/244 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I G C + + +D   LL EM + G   N +   TLMD+  K+G+  +A +L 
Sbjct: 305 DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLA 364

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             ML    + +  TF ++ID  CK G +  A + F  M D G  P++  Y  +I G C+ 
Sbjct: 365 QMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRA 424

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N I+ AR L + M +    PD   Y +++ G  K     EA  +   +   G  LD+   
Sbjct: 425 NRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTC 484

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           ++L+ GL +   L +A  L  EM   G  PD +    L+    +   +D+++   +EM+ 
Sbjct: 485 STLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLD 544

Query: 249 RGLL 252
           +G +
Sbjct: 545 KGCV 548



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 108/239 (45%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N    +  Y  ++  LC  ++  D+ L+L +M E G   N V   TL++ + K G   E
Sbjct: 230 RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDE 289

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ L ++ML++     V T+ +LIDG CK    ++       M  +G  PN   Y  L+D
Sbjct: 290 AVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 349

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            L K      A NL   M +RD  P    +  +ID + K      A  L   MT+ G   
Sbjct: 350 SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 409

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           D+  Y  ++ G  R   + +AR L   M   G  PD +   S++    +   +DEA E+
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468



 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 115/252 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y  +I G C  ++ +D++ LL  M E G   + V   +++    KA +
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + + + +    + VVT   LIDGLCKS  + +A      M   G  P+V  YT 
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK + ++++   F EM  +  +P    Y+ +ID   K    ++   L   M E G
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   YTS++ GL +     EA  L+  M   G  P  +    L+ K  +   +DEAI
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641

Query: 241 ELQNEMMGRGLL 252
            L   M   G L
Sbjct: 642 HLLEVMESDGCL 653



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 110/240 (45%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C    F+ +  LL EM++ G+  +  +  T++      G    AL    +M 
Sbjct: 170 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM- 228

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 +V+T+ +L+D LCKS  + +A      M + G  PNV  Y  LI+G CK   ++
Sbjct: 229 QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 288

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF++M +    PD   Y  LIDGY K E  ++   L   M + G + +   Y +L+
Sbjct: 289 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLM 348

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L + G   +A  L   M+ R   P       ++    + G +D A EL   M  RG L
Sbjct: 349 DSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCL 408



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 118/251 (47%), Gaps = 3/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I     +Y TII GLC   + + + +   +M+ N    + +  T L+DA  K+  
Sbjct: 193 MEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVITYTILVDALCKSAR 251

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  +L++M+++     VVT+  LI+G CK G + EA+  F +M +    P+V  Y  
Sbjct: 252 ISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNI 311

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+   +    L  EM K    P+   Y  L+D  +K   + +A NL   M    
Sbjct: 312 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 371

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEA 239
                  +  ++    + G L  A  LF  M  RG LPD I   +++     R N +D+A
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPD-IYTYNIMISGACRANRIDDA 430

Query: 240 IELQNEMMGRG 250
            +L   M   G
Sbjct: 431 RQLLERMTEAG 441



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 104/219 (47%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L   M + G   +      ++    +A    +A  LL+ M ++     VVT+  ++ GLC
Sbjct: 398 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+  V EA + +  + + G   +V   + LIDGLCK   ++ A  L  EM +    PD  
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           AYT LI G+ K +   ++L   + M + G    +  Y+ ++  L +   +++  +L   M
Sbjct: 518 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 577

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + RG+ PD I+  S++    +  + DEA EL   M   G
Sbjct: 578 LERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTG 616



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 1/208 (0%)

Query: 42  TANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           + +++  +TL++ + KA +  +A  LLDEM    I      +  +I GLC +G V  A+ 
Sbjct: 164 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 223

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
           ++  M      P+V  YT L+D LCK   I  A  + ++M +    P+   Y  LI+G+ 
Sbjct: 224 HYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           K  +  EA+ L N+M E     D+  Y  L+ G  +    Q+   L  EM+  G  P+ I
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 342

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGR 249
              +L+    + G   +A  L   M+ R
Sbjct: 343 TYNTLMDSLVKSGKYIDAFNLAQMMLRR 370



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 80/172 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC  ++  D  +LL  M E G+T + ++ T+++D   K+    EA  L   M 
Sbjct: 554 YSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMK 613

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +    TVVT+ VL+D LCK   + EAI     M   G  P+   Y ++ DG  K    +
Sbjct: 614 QTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHD 673

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           +A  LF  M  R   P    Y+ L+   +  E   +A+ +     E G D+D
Sbjct: 674 KAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 1/213 (0%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           + G   +   C  L+ A+ +  +  EA  L             +T+  LI+G CK+   +
Sbjct: 125 QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQ 184

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +A      M   G+ P+ AVY  +I GLC    ++ A   + +M +R+  P    YT L+
Sbjct: 185 QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILV 243

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D   K     +A  +   M E G   ++  Y +L+ G  + G++ EA VLF++M+     
Sbjct: 244 DALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCS 303

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           PD      L+  + ++    +  +L  EM+  G
Sbjct: 304 PDVFTYNILIDGYCKQERPQDGAKLLQEMVKYG 336



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 62/140 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D  +Y ++I GLC    ++++  L   MK+ G     V    L+D   K   
Sbjct: 577 MLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSR 636

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL+ M         VT+  + DG  KS    +A   F  M   G  P   +Y+ 
Sbjct: 637 LDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSL 696

Query: 121 LIDGLCKKNCIERARNLFDE 140
           L+  L  +  +++A  +++E
Sbjct: 697 LLTKLVAEEKMDQAMEIWEE 716


>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
 gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 638

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 130/249 (52%), Gaps = 1/249 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  + ++++G C E K  ++K +L +MKE GL  + V+ T L+  Y  AG+ ++A  L+
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKS-GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           ++M     E  V  + VLI  LC++   + EA+  F  M  +G   ++  YTALI G CK
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              I++  ++ D+M K+ ++P    Y  ++  + K E F+E L L  +M   G   DL  
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  ++    + G ++EA  L++EM   G+ P     + ++     +G + EA     EM+
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474

Query: 248 GRGLLSGSK 256
            RG+ S  +
Sbjct: 475 SRGIFSAPQ 483



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 2/255 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D  ++G ++  LC     +++  +  +M+E     N    T+L+  + + G+
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGK 251

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L +M ++ +E  +V F  L+ G   +G + +A D    M   G  PNV  YT 
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311

Query: 121 LIDGLCK-KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI  LC+ +  ++ A  +F EM +     D   YTALI G+ K     +  ++ + M + 
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV      Y  ++    +    +E   L  +M  RG  PD ++   +++   + G + EA
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEA 431

Query: 240 IELQNEMMGRGLLSG 254
           + L NEM   GL  G
Sbjct: 432 VRLWNEMEANGLSPG 446



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 13/240 (5%)

Query: 17  IWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           +WGL  E +  + +L+  E+              LM  +  A    +A+ +LDEM    +
Sbjct: 150 VWGLIEEMRKTNPELIEPEL-----------FVVLMRRFASANMVKKAVEVLDEMPKYGL 198

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
           E     F  L+D LCK+G V+EA   F  M +    PN+  +T+L+ G C++  +  A+ 
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKE 257

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           +  +M +  + PD   +T L+ GY       +A +L N M + G + ++N YT L+  L 
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317

Query: 197 RC-GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           R    + EA  +F EM   G   D +   +L+    + G +D+   + ++M  +G++   
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 107/226 (47%), Gaps = 4/226 (1%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +AD+  Y  +I G C     +    +L +M++ G+  + V    +M A+ K  +  E L 
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L+++M        ++ + V+I   CK G V+EA+  +  M   GL P V  +  +I+G  
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458

Query: 127 KKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFKEALNLKNRMTE--VGVD 182
            +  +  A N F EM  R +   P      +L++  ++ +  + A ++ + ++      +
Sbjct: 459 SQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCE 518

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           L+++A+T  +  L   GH++EA     +M+   ++P       L+K
Sbjct: 519 LNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMK 564


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 126/257 (49%), Gaps = 8/257 (3%)

Query: 3   GKNIKA-----DLPLYGTIIWGLCIES---KFEDSKLLLSEMKENGLTANTVICTTLMDA 54
            K+IKA      +  Y ++I G C +          +LL EM E G++   V    L++ 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 55  YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
           Y K    + A+ + +EM    I  +VVT+  LI GLC  G V E +     M D GL PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
              +  ++ G CKK  +  A +  D M +R++ PD   YT LIDGY +    ++A+ +K 
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M + G+  ++  Y  L+ G SR G  + A  L  EM  +GI  D +    L+     +G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 235 NMDEAIELQNEMMGRGL 251
            + +A++L +EM   GL
Sbjct: 454 EVRKAVKLLDEMSEVGL 470



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 122/234 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G +I G C  S    +  +  EMK+ G+ A+ V   +L+      G+  E + L++EM 
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +    +TF  ++ G CK G++ +A D+   M +  + P+V +YT LIDG  +   +E
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKME 386

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + + M K+ + P+ T Y  LI G+ +   ++ A  L + M E G++ D+  Y  L+
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             L   G +++A  L  EM   G+ P+ +   ++++   ++GN+  A E++  M
Sbjct: 447 GALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 124/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I A +  Y ++I GLC E K E+   L+ EM++ GL+ N +    ++  + K G 
Sbjct: 290 MKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGM 349

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A   +D M +  +E  VV + +LIDG  + G + +A+     M   G+ PNV  Y  
Sbjct: 350 MADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNC 409

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  +      A  L DEM ++ +  D   Y  LI         ++A+ L + M+EVG
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +++ G    G+++ A  +   M       + +     +K   + G MDEA 
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAN 529

Query: 241 ELQNEMMGRGLL 252
           +L NEM+ + L+
Sbjct: 530 DLLNEMLDKCLV 541



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 3/183 (1%)

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L  R+   + TF  +I GLC+ G +R+A D    +  +GL P+VA Y +LIDG CKK   
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242

Query: 132 ERARN---LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
               +   L  EM +  + P    +  LI+GY K+ +   A+ +   M + G+   +  Y
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SL+ GL   G ++E   L  EM   G+ P+EI    +LK   ++G M +A +  + M  
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362

Query: 249 RGL 251
           R +
Sbjct: 363 RNV 365



 Score = 78.2 bits (191), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 77/162 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y  +I G      +  +  LL EMKE G+ A+ V    L+ A    GE
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LLDEM +  +E   +T+  +I G C  G ++ A +   RM       NV  Y  
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
            I   C+   ++ A +L +EM  + ++P+   Y  + +G ++
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 59/128 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I+AD+  Y  +I  LC + +   +  LL EM E GL  N +   T++  +   G 
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +   M   R    VVT+ V I   C+ G + EA D    M D  L PN   Y  
Sbjct: 490 IKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET 549

Query: 121 LIDGLCKK 128
           + +G+ +K
Sbjct: 550 IKEGMMEK 557


>gi|341605747|gb|AEK82976.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605749|gb|AEK82977.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605751|gb|AEK82978.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 131/282 (46%), Gaps = 35/282 (12%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
            D+  +  ++  LC E K  +++LL  E+ + GL    V   TL++ Y K+G   +   L
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------------- 114
              M+++R+   V T+ VLI+GLCK G + +A   F  M D GL PN             
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342

Query: 115 ----------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
                                 V  Y  LI+GLCK   +  A+ L  EM +R + PD   
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           YT LIDG  K    + AL ++  M + G++LD  A+T+L+ G  R G + EA     EM+
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             GI PD+     ++    ++G++    +L  EM   G + G
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPG 504



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 122/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y  +I GLC E + +D+  L  EM + GL  N V  TTL++ +   G 
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + +  +ML   ++  V+T+  LI+GLCK G +REA      M   GL P+   YT 
Sbjct: 346 ADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTM 405

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A  +  EM K  +  D  A+TALI G+ +     EA      M E G
Sbjct: 406 LIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAG 465

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT ++ G  + G ++    L  EM   G +P  +    LL    ++G M  A 
Sbjct: 466 IKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNAN 525

Query: 241 ELQNEMMGRGLL 252
            L + M+  G++
Sbjct: 526 MLLDAMLNLGVV 537



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 116/229 (50%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           + K   S +  S ++  G   + ++ + LM+AY  +G  S+A+     +    +++   +
Sbjct: 133 KGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHS 192

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
              L D L K  L   A  ++  + D G  P+V  +  L+  LCK++ I  A+ LF E+ 
Sbjct: 193 CGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIG 252

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           KR + P   ++  LI+GY K  +  +   LK  M E  V  D+  Y+ L+ GL + G L 
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLD 312

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +A  LF EM  RG++P+++   +L+  H   G  D  +E+  +M+ +G+
Sbjct: 313 DANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGV 361



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 113/217 (52%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+ + G   +      LM    K  + +EA  L  E+    +  TVV+F  LI+G CKSG
Sbjct: 215 EILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSG 274

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + +       M +  + P+V  Y+ LI+GLCK+  ++ A  LF EM  R ++P+   +T
Sbjct: 275 NLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFT 334

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LI+G+         + +  +M   GV  D+  Y +L+ GL + G L+EA+ L  EM  R
Sbjct: 335 TLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR 394

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G+ PD+     L+    + G+++ A+E++ EM+  G+
Sbjct: 395 GLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGI 431



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 91/192 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K D+  Y T+I GLC      ++K L+ EM + GL  +    T L+D   K G+
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  EM+   IE+  V F  LI G C+ G V EA      M + G+ P+ A YT 
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G CKK  ++    L  EM     +P    Y  L++G  K    K A  L + M  +G
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535

Query: 181 VDLDLNAYTSLV 192
           V  D   Y  L+
Sbjct: 536 VVPDDITYNILL 547



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 103/217 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C+  + +    +  +M   G+  + +   TL++   K G+  EA  L+ EM 
Sbjct: 333 FTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMT 392

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++    T+ +LIDG CK G +  A++    M   G+  +   +TALI G C++  + 
Sbjct: 393 QRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVI 452

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A     EM +  + PD   YT +I G+ K    K    L   M   G    +  Y  L+
Sbjct: 453 EAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLL 512

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
            GL + G ++ A +L   M+  G++PD+I    LL++
Sbjct: 513 NGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLER 549



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 78/162 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K D   Y  +I G C E   E +  +  EM + G+  + V  T L+  + + G+
Sbjct: 391 MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQ 450

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   L EML++ I+    T+ ++I G CK G V+        M   G  P V  Y  
Sbjct: 451 VIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNV 510

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           L++GLCK+  ++ A  L D M    ++PD   Y  L++  L+
Sbjct: 511 LLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQ 552


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 121/240 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TI++GLC   +  D++ LL  M    L  + V   TL+  Y + G   EA  L  E+ 
Sbjct: 298 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 357

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VVT+  LIDGLC+ G +  A+     M   G  P+V  +T L+ G CK   + 
Sbjct: 358 FRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLP 417

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ LFDEM  R + PD  AY   I G LK     +A  ++  M   G   DL  Y   +
Sbjct: 418 MAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 477

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL + G+L+EA  L  +M+  G++PD +   S++  H   G++ +A  +  EM+ +G+ 
Sbjct: 478 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIF 537



 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  DL  Y T+I+G        ++ LL +E++  GL  + V   TL+D   + G+
Sbjct: 321 MVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGD 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L DEM+    +  V TF +L+ G CK G +  A + F  M + GL P+   Y  
Sbjct: 381 LDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYIT 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  K     +A  + +EM  R   PD   Y   IDG  K  + KEA  L  +M   G
Sbjct: 441 RIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YTS++      GHL++AR +F EM+ +GI P  +    L+  +  RG +  AI
Sbjct: 501 LVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAI 560

Query: 241 ELQNEMMGRGL 251
               EM  +G+
Sbjct: 561 LHFFEMHEKGV 571



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GL    + E +K L+ EM   GL  +      L+  Y + G+  EA  L +EML
Sbjct: 228 YNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEML 287

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 T+VT+  ++ GLCK G V +A      M +  L P++  Y  LI G  +   I 
Sbjct: 288 SRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIG 347

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF E+  R ++P    Y  LIDG  +      A+ LK+ M + G D D+  +T LV
Sbjct: 348 EAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILV 407

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G+L  A+ LF EM+ RG+ PD    I+ +    + G+  +A  +Q EM+ RG 
Sbjct: 408 RGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGF 466



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 122/246 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+  +  Y T++   C + K +++  LL +M++ G   N V    L++    +GE  +A 
Sbjct: 186 IRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAK 245

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EML   +EV+  T+  LI G C+ G + EA      M   G  P +  Y  ++ GL
Sbjct: 246 ELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGL 305

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +  AR L D M  ++++PD  +Y  LI GY +  +  EA  L   +   G+   +
Sbjct: 306 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSV 365

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL R G L  A  L  EMI  G  PD      L++   + GN+  A EL +E
Sbjct: 366 VTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDE 425

Query: 246 MMGRGL 251
           M+ RGL
Sbjct: 426 MLNRGL 431



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 116/240 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C + + +++  L  EM   G     V   T+M    K G  S+A  LLD M+
Sbjct: 263 YDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMV 322

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   +V++  LI G  + G + EA   F  +   GL P+V  Y  LIDGLC+   ++
Sbjct: 323 NKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLD 382

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L DEM K    PD   +T L+ G+ K  +   A  L + M   G+  D  AY + +
Sbjct: 383 VAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRI 442

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  + G   +A  +  EM+ RG  PD I     +   ++ GN+ EA EL  +M+  GL+
Sbjct: 443 VGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLV 502



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 114/241 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +  ++ G C       +K L  EM   GL  +     T +    K G+PS+A  + 
Sbjct: 399 DVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQ 458

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EML       ++T+ V IDGL K G ++EA +   +M   GL P+   YT++I      
Sbjct: 459 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 518

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             + +AR +F EM  + + P    YT LI  Y      K A+     M E GV  ++  Y
Sbjct: 519 GHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITY 578

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ GL +   + +A   F EM  +GI P++     L+ ++   G+  EA+ L  +M+ 
Sbjct: 579 NALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLD 638

Query: 249 R 249
           R
Sbjct: 639 R 639



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 118/228 (51%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           +S  + ++ + + M E G+    V   T++D++ K G+  EAL LL +M         VT
Sbjct: 168 DSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVT 227

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           + VL++GL  SG + +A +    M   GL  +   Y  LI G C+K  ++ A  L +EM 
Sbjct: 228 YNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEML 287

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
            R  +P    Y  ++ G  K     +A  L + M    +  DL +Y +L++G +R G++ 
Sbjct: 288 SRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIG 347

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           EA +LF E+  RG++P  +   +L+      G++D A+ L++EM+  G
Sbjct: 348 EAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHG 395



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 105/228 (46%), Gaps = 35/228 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    DL  Y   I GL      +++  L+ +M  NGL  + V  T+++ A+  AG 
Sbjct: 461 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 520

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A ++  EML   I  +VVT+ VLI      G ++ AI +F  M + G+HPNV  Y A
Sbjct: 521 LRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 580

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +++A   F EM  + + P+   YT LI+         E  NL        
Sbjct: 581 LINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILIN---------ENCNL-------- 623

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
                             GH QEA  L+ +M+ R I PD     +LLK
Sbjct: 624 ------------------GHWQEALRLYKDMLDREIQPDSCTHSALLK 653



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 1/236 (0%)

Query: 18  WGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYF-KAGEPSEALSLLDEMLDSRI 76
           W    +S  E   L+  +M   G+  +   C  ++     +      A  + + M++  I
Sbjct: 127 WIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGI 186

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
             TVVT+  ++D  CK G V+EA+    +M   G  PN   Y  L++GL     +E+A+ 
Sbjct: 187 RPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKE 246

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           L  EM +  +      Y  LI GY +     EA  L   M   G    L  Y ++++GL 
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLC 306

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           + G + +AR L   M+ + ++PD +   +L+  +   GN+ EA  L  E+  RGL+
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLV 362


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 124/239 (51%), Gaps = 1/239 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +Y + I GLC   K +++K +  +M E G   + V    ++ +  K    SEA  L+
Sbjct: 259 DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELM 318

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDGLCK 127
           D+ ++ +    V    VL+DGLCKS  V EA     RM + G   P+V  Y+A+IDGLCK
Sbjct: 319 DQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCK 378

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
            + ++ A  +  +M +   +PD   YTA+ID + K     EA  L  RM E G  LD+ A
Sbjct: 379 ADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVA 438

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           Y  L+ G  R   + EA  +  EM GRGI P+ +   +++    +   ++EA  L  +M
Sbjct: 439 YNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 125/252 (49%), Gaps = 3/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KG        LY T+I GLC   + ++++ L  EM   G   + ++ T+ +    KAG+
Sbjct: 218 LKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMAA-GDVQDVIVYTSFISGLCKAGK 275

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++  +M+++      V++ V+I  LCK   V EA +   +  +    P V V T 
Sbjct: 276 LDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTV 335

Query: 121 LIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L+DGLCK   +E A  + + M +  D  P    Y+A+IDG  K +   +A  +  +M   
Sbjct: 336 LVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRA 395

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  YT+++    + G L EAR LF  M  RG   D +    L++ +     +DEA
Sbjct: 396 GCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEA 455

Query: 240 IELQNEMMGRGL 251
           I +  EM GRG+
Sbjct: 456 IAMIEEMAGRGI 467



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 120/246 (48%), Gaps = 2/246 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
            +K D  LY  +I  LC  +K + +      M ++G   + V  T L+ + FKA +  + 
Sbjct: 117 KVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQG 176

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             + +EML       +VT+  +++G CK+G + +A+    R+   G  P+ ++Y+ LIDG
Sbjct: 177 HQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDG 236

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK +  + AR LF EM   D + D   YT+ I G  K     EA  +  +M E G   D
Sbjct: 237 LCKHDRHDEARELF-EMAAGD-VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPD 294

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
             +Y  +++ L +   + EA+ L  + + R  +P   +C  L+    +   ++EA  +  
Sbjct: 295 PVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE 354

Query: 245 EMMGRG 250
            M+  G
Sbjct: 355 RMLETG 360



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 2/238 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I G C   +   +  LL EMK  G+T   V   +L+    +     +AL +  +M+
Sbjct: 55  YGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMI 114

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D +++     + V+I  LCK   +  A  YF RM   G  P+   YT L+  L K    E
Sbjct: 115 DMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWE 174

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +   +F+EM  +   P+   Y  +++GY K     +AL+L  R+   G     + Y++L+
Sbjct: 175 QGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLI 234

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL +     EAR LF   +  G + D I+  S +    + G +DEA  +  +M+  G
Sbjct: 235 DGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAG 290



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 98/211 (46%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   NT  C +L++ +   G   EA  +  + L +       T+  LI G CK+  + +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           ++  G M   G+ P +  + +LI  LC+ N  ++A  +F +M    + PD   YT +I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K      A +   RM + G   D   YT LV  L +    ++   +F EM+ +G  P+
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +   +++  + + G +D+A+ L   + G G
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTG 222



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 1/138 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC   + +D+ ++L +M+  G   + V  T ++DA+ K G   EA  L   M 
Sbjct: 369 YSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMH 428

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +    + VV + +LI G C++  V EAI     M   G+ PNV   + ++DGLCK++ +E
Sbjct: 429 ERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVE 488

Query: 133 RARNLFDEMPKRDMIPDT 150
            AR L ++M   + +PD+
Sbjct: 489 EARLLMEKM-NFESLPDS 505



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 56/143 (39%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G   N     +L++      C   A  +F +       PD   Y  LI G+ K E   +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           +NL   M   G+   +  + SL+  L       +A  +FH+MI   + PD  L   ++  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 230 HYERGNMDEAIELQNEMMGRGLL 252
             +   +D A      M+  G L
Sbjct: 132 LCKINKLDLAASYFERMVQSGCL 154


>gi|341606955|gb|AEK83580.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 206

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 5   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 65  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 184

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 185 GCDQTVYTYTILISGMFK 202



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 87/180 (48%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++  
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 120

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L   M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 180



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 180



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 2   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 62  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMF 121

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 122 YSSLIDGLGKAGRIDEAERLFEEMSEKG 149


>gi|356506793|ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Glycine max]
          Length = 461

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 128/251 (50%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  + T+I G   +S F  S  L  EM + G+  +      LM+  F+ G+
Sbjct: 74  MHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQLGK 133

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA  +  E++  R EV   T+ ++I+GLCK+G V  A+  F  +   G  P V  Y A
Sbjct: 134 PDEANRVFKEIV-LRDEVHPATYNIMINGLCKNGYVGNALSLFRNLQRHGFVPQVLTYNA 192

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   ++ AR +  E  +    P+   YT ++    +   F+E L + + M  +G
Sbjct: 193 LINGLCKARRLKDARRVLKEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMRSLG 252

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D  AY +++  + + G +QEA  +   M+  G+ PD +   +L+  +  +G +D+A+
Sbjct: 253 FTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDAL 312

Query: 241 ELQNEMMGRGL 251
            L +E+ G GL
Sbjct: 313 RLLDEIEGEGL 323



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 94/199 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC   + +D++ +L E  E G   N V  TT+M   F+     E L +L EM 
Sbjct: 190 YNALINGLCKARRLKDARRVLKEFGETGNEPNAVTYTTVMTCCFRCRLFEEGLEILSEMR 249

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                     +C +I  + K+G ++EA +    M   G+ P++  Y  LI+  C++  ++
Sbjct: 250 SLGFTFDGFAYCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLD 309

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L DE+    +  D   +T ++DG  K  +F  A    N M  +G   +L A+   +
Sbjct: 310 DALRLLDEIEGEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCFL 369

Query: 193 WGLSRCGHLQEARVLFHEM 211
            GL + GH+  A  LF  M
Sbjct: 370 DGLGKAGHIDHALRLFEVM 388



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 4/193 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I  +    + ++++ ++  M  +G+  + V   TL++ Y + G   +AL LLDE+ 
Sbjct: 260 YCTVIAAMIKTGRMQEAEEIVEMMVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEIE 319

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +E    T  +++DGLCK+G    A  +   M   G   N+  +   +DGL K   I+
Sbjct: 320 GEGLECDQYTHTIIVDGLCKAGNFDGAQRHLNYMNSLGFGSNLVAFNCFLDGLGKAGHID 379

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+ M     + D+  YT ++    +   F  A  +     + G  +      +++
Sbjct: 380 HALRLFEVME----VKDSFTYTIVVHNLCRARRFLCASKVLVSCLKCGYQVLRATQRAVI 435

Query: 193 WGLSRCGHLQEAR 205
            GL   G+  EAR
Sbjct: 436 VGLRSIGYANEAR 448



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 34/206 (16%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           VVT+  LID  C+   +  A     RM D G+ P+V  +  LI G  +K+   ++ +LFD
Sbjct: 48  VVTYNTLIDAYCRFATLDVAYSVLARMHDAGIPPDVVSFNTLISGAVRKSLFSKSLDLFD 107

Query: 140 EMPKRDMIPDT----------------------------------TAYTALIDGYLKHES 165
           EM KR + PD                                     Y  +I+G  K+  
Sbjct: 108 EMLKRGINPDAWSHNILMNCLFQLGKPDEANRVFKEIVLRDEVHPATYNIMINGLCKNGY 167

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
              AL+L   +   G    +  Y +L+ GL +   L++AR +  E    G  P+ +   +
Sbjct: 168 VGNALSLFRNLQRHGFVPQVLTYNALINGLCKARRLKDARRVLKEFGETGNEPNAVTYTT 227

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGL 251
           ++   +     +E +E+ +EM   G 
Sbjct: 228 VMTCCFRCRLFEEGLEILSEMRSLGF 253



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 61/128 (47%)

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +  LCK   I  A     +  +  ++PD   Y  LID Y +  +   A ++  RM + G+
Sbjct: 20  VSSLCKAKQIPNAETAIVDGIRLGVLPDVVTYNTLIDAYCRFATLDVAYSVLARMHDAGI 79

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D+ ++ +L+ G  R     ++  LF EM+ RGI PD      L+   ++ G  DEA  
Sbjct: 80  PPDVVSFNTLISGAVRKSLFSKSLDLFDEMLKRGINPDAWSHNILMNCLFQLGKPDEANR 139

Query: 242 LQNEMMGR 249
           +  E++ R
Sbjct: 140 VFKEIVLR 147



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 4/127 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ DL  Y T+I   C + + +D+  LL E++  GL  +    T ++D   KAG 
Sbjct: 283 MVSSGVRPDLVSYNTLINLYCRQGRLDDALRLLDEIEGEGLECDQYTHTIIVDGLCKAGN 342

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A   L+ M        +V F   +DGL K+G +  A+  F  M       +   YT 
Sbjct: 343 FDGAQRHLNYMNSLGFGSNLVAFNCFLDGLGKAGHIDHALRLFEVMEV----KDSFTYTI 398

Query: 121 LIDGLCK 127
           ++  LC+
Sbjct: 399 VVHNLCR 405


>gi|260780426|gb|ACX50759.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780428|gb|ACX50760.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780432|gb|ACX50762.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780434|gb|ACX50763.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780436|gb|ACX50764.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780438|gb|ACX50765.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780440|gb|ACX50766.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780442|gb|ACX50767.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780444|gb|ACX50768.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780446|gb|ACX50769.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780448|gb|ACX50770.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780450|gb|ACX50771.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780452|gb|ACX50772.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780454|gb|ACX50773.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780456|gb|ACX50774.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780458|gb|ACX50775.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780460|gb|ACX50776.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780462|gb|ACX50777.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780464|gb|ACX50778.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780466|gb|ACX50779.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780470|gb|ACX50781.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780472|gb|ACX50782.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780474|gb|ACX50783.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780476|gb|ACX50784.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780478|gb|ACX50785.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780480|gb|ACX50786.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780482|gb|ACX50787.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780486|gb|ACX50789.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780488|gb|ACX50790.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780490|gb|ACX50791.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780492|gb|ACX50792.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780494|gb|ACX50793.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780498|gb|ACX50795.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780500|gb|ACX50796.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780502|gb|ACX50797.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780504|gb|ACX50798.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 199

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 101/192 (52%), Gaps = 1/192 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+     +  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGN 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVTF V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID + KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSL 191
           G D  +  YT L
Sbjct: 188 GCDQTVYTYTIL 199



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   ++ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 87/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+       + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  ++ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+   ++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 183



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+      ++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             + ++A+ L +RM + G   D+  ++ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152



 Score = 45.1 bits (105), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 53/115 (46%)

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           L+ EM ++ +     A++ +I G  K     E   +   M   G   ++  YT L+ G +
Sbjct: 4   LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G++++A  L H MI  G  PD +    ++    + G ++EA++        GL
Sbjct: 64  KSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGL 118


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      D  +Y T++ GLC   +  +++ LLS+    G   N V+   L+D Y   G+
Sbjct: 168 MQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGD 227

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ + + M  +     V T+  LI G CKS  +  A+  F RM D GL PNV  YTA
Sbjct: 228 LELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTA 287

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    ++ A  L   M    ++P+    + LID   KHE   EA  L   + + G
Sbjct: 288 LIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKG 347

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + ++   YTSL+ GL + G    A  L   ++ +G +PD     SL+     +  + EA+
Sbjct: 348 IKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAM 407

Query: 241 ELQNEMMGRGL 251
            + ++MM +G+
Sbjct: 408 LVLDDMMEKGV 418



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 4/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N++     Y T+I   C+      SK  LS +   G   ++   T+ +  Y +AG 
Sbjct: 67  MPARNLRT----YTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGL 122

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L   M       T  T+  L+ GLC +G+VREA+  F  M   G  P+  VY  
Sbjct: 123 LAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYAT 182

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC       A  L  +       P+   Y ALIDGY      + A+++  RM   G
Sbjct: 183 MVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNG 242

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YT L+ G  +   L  A +LF  M+  G++P+ +   +L++     G +D A 
Sbjct: 243 CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAY 302

Query: 241 ELQNEMMGRGLL 252
            L   M   GL+
Sbjct: 303 RLLQSMENSGLV 314



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 110/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C   K + + +L S M + GL  N V  T L+      G+   A  LL  M 
Sbjct: 250 YTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSME 309

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S +     T  VLID LCK   V EA    G +   G+  N  VYT+LIDGLCK     
Sbjct: 310 NSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFA 369

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   +  +  +PD   Y++LIDG  + +   EA+ + + M E GV      YT ++
Sbjct: 370 AADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIII 429

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L R      ++ +  +MI  GI PD       ++ +   G M++A  +   M+  G+
Sbjct: 430 DELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGV 488



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 112/238 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C + + + +  LL  M+ +GL  N   C+ L+DA  K     EA  LL  ++
Sbjct: 285 YTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLI 344

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+V  + +  LIDGLCK+G    A      +   G  P+   Y++LIDGLC++  + 
Sbjct: 345 QKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELS 404

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + D+M ++ + P    YT +ID  ++      +  + ++M   G+  D+  YT  V
Sbjct: 405 EAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFV 464

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
                 G +++A  +   M+  G+ P+ +   +L+  +   G   +A      M+  G
Sbjct: 465 RSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANG 522



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 100/207 (48%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
             +I  LC   +  +++LLL  + + G+  N ++ T+L+D   KAG  + A  L+  ++ 
Sbjct: 321 SVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVS 380

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
                   T+  LIDGLC+   + EA+     M + G+ P+   YT +ID L ++   + 
Sbjct: 381 QGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADG 440

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           ++ + D+M    + PD   YT  +  Y      ++A ++   M + GV  +L  Y +L+ 
Sbjct: 441 SKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALIC 500

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDE 220
           G +  G   +A   F  M+  G  P+E
Sbjct: 501 GYANLGLTSQAFSTFKHMVANGCKPNE 527



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 112/260 (43%), Gaps = 16/260 (6%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y ++I GLC + +  ++ L+L +M E G+  + V  T ++D   +      +  +L
Sbjct: 386 DAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKIL 445

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D+M+ + I+  V T+ + +   C  G + +A      M D G+ PN+  Y ALI G    
Sbjct: 446 DKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANL 505

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES----------------FKEALNL 172
               +A + F  M      P+  +YT L+   +K ES                 K    L
Sbjct: 506 GLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGL 565

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M ++ +  +++ Y   +  L R   L EA++L  EM    + P E +  S++     
Sbjct: 566 LEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCR 625

Query: 233 RGNMDEAIELQNEMMGRGLL 252
              + EA+   + M+  G +
Sbjct: 626 LKMLTEALTFVDSMVKSGYI 645



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 30/269 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    IK D+  Y   +   C E + ED++ ++  M ++G+  N V    L+  Y   G 
Sbjct: 448 MIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGL 507

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS-----------------------GLVR 97
            S+A S    M+ +  +    ++ VL+  L K                        GL+ 
Sbjct: 508 TSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLE 567

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           E       M    L   + +Y   +  LC+ + ++ A+ L  EM   ++ P    YT++I
Sbjct: 568 E-------MVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSII 620

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
               + +   EAL   + M + G    L +Y  ++  L   G +Q A+ +F +M+ +   
Sbjct: 621 ACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYN 680

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEM 246
            +EI    L+    ++G + E   L + M
Sbjct: 681 YEEIAWRILIDGLLQKGYVAECSSLLSVM 709



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 73/152 (48%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
            + +++ +Y   +  LC   + +++K+LL EM+   LT +  + T+++    +    +EA
Sbjct: 573 QLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEA 632

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L+ +D M+ S     + ++  +I  LC+ G ++ A   FG M     +     +  LIDG
Sbjct: 633 LTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDG 692

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
           L +K  +    +L   M +++  P    Y  L
Sbjct: 693 LLQKGYVAECSSLLSVMEEKNYRPSDALYARL 724



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 3/200 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K    ++P     IW +  E K+     LL EM +  L +   I    + +  +     E
Sbjct: 540 KESSNNIPANSVSIWKIA-EMKYLHG--LLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDE 596

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EM  + +  +   +  +I   C+  ++ EA+ +   M   G  P +  Y  +I 
Sbjct: 597 AKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIIS 656

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LC++  I+ A+ +F +M  ++   +  A+  LIDG L+     E  +L + M E     
Sbjct: 657 SLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRP 716

Query: 184 DLNAYTSLVWGLSRCGHLQE 203
               Y  L   ++    +QE
Sbjct: 717 SDALYARLTGKITDANDIQE 736


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 129/239 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  LL  +    +  N V+  T++D+  K    +EA  L  EM+
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMV 239

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVT+  LI G C  G +++A D F +M    ++PNV  +  L+DG CK+  ++
Sbjct: 240 SKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLK 299

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+N+   M K+ + PD   Y +L+D Y   +   +A ++ N +++ GV+ ++++Y+ ++
Sbjct: 300 EAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMI 359

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   + EA  LF EM    I+PD +   SL+    + G +  A++L +EM  RG+
Sbjct: 360 HGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 136/255 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI  ++  +  ++ G C E + +++K +L+ M + G+  +     +LMD Y    E
Sbjct: 273 MIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKE 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  + + +    +   + ++ ++I G CK   V EA++ F  M    + P+V  Y +
Sbjct: 333 VNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNS 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I  A  L DEM  R +  D   Y +++D   K+    +A+ L  +M + G
Sbjct: 393 LIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 452

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  YT+LV GL + G L++AR++F +++ +G + D  +  ++++     G  DE++
Sbjct: 453 IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESL 512

Query: 241 ELQNEMMGRGLLSGS 255
           +L ++M   G +  +
Sbjct: 513 DLLSKMEENGCIPNA 527



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 129/249 (51%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ ++ +Y TII  +C      ++  L SEM   G++ + V    L+  +   G+  
Sbjct: 205 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMK 264

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L ++M+   I   V TF +L+DG CK   ++EA +    M   G+ P+V  Y +L+
Sbjct: 265 DATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLM 324

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D  C    + +A+++F+ + +R + P+  +Y+ +I G+ K +   EA+NL   M    + 
Sbjct: 325 DRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNII 384

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y SL+ GL + G +  A  L  EM  RG+  D+I   S+L    +   +D+AI L
Sbjct: 385 PDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 444

Query: 243 QNEMMGRGL 251
             +M   G+
Sbjct: 445 LTKMKDEGI 453



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 113/214 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  ++  Y  +I G C   K +++  L  EM  N +  + V   +L+D   K G+ S 
Sbjct: 346 RGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISY 405

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L+DEM D  +    +T+  ++D LCK+  V +AI    +M D G+ P++  YT L+D
Sbjct: 406 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVD 465

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   +E AR +F+++  +  I D   YTA+I G+  H  F E+L+L ++M E G   
Sbjct: 466 GLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIP 525

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +   Y  ++  L       +A  L  EMI RG+ 
Sbjct: 526 NAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 127/252 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK D+  Y +++   C+  +   +K + + + + G+  N    + ++  + K  +
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKK 367

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L  EM  + I   VVT+  LIDGLCK G +  A+     M D G+  +   Y +
Sbjct: 368 VDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNS 427

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D LCK + +++A  L  +M    + PD   YT L+DG  K+   ++A  +   +   G
Sbjct: 428 ILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKG 487

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             LD+N YT+++ G    G   E+  L  +M   G +P+ +    ++   +++   D+A 
Sbjct: 488 YILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAE 547

Query: 241 ELQNEMMGRGLL 252
           +L  EM+ RGL 
Sbjct: 548 KLLREMITRGLF 559



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 131/286 (45%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  KN K  +  +G I+  L   + +     L  +M+ NG+T++ VI + L++ + + G+
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH-------- 112
              + S+L ++L    E  V+T   LI GLC  G + +A+ +  ++   G H        
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 113 ---------------------------PNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                      PNV +Y  +ID +CK   +  A +L+ EM  + 
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   Y ALI G+      K+A +L N+M    ++ ++  +  LV G  +   L+EA+
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   M+ +GI PD     SL+ ++     +++A  + N +  RG+
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 120/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C+  + ++++ +   M   G T N    T+LM+ Y K     EA+ LLDE L
Sbjct: 205 YSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETL 264

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   +VTF  +I GLC++G    A   F  +   G  PN+  Y  L+DGLCK   +E
Sbjct: 265 RKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLE 324

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM +  + P+   YT LID   K    K+   L +R+ + G+  ++  YT+LV
Sbjct: 325 EAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALV 384

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L + G + EA  LF +M   G  PD+     +++   +  +   A +L  EM+ RG 
Sbjct: 385 GALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGF 443



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 126/241 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D+     +I   C   + +    +LS++ + GL  + V  TTL++     G+  + +
Sbjct: 93  IEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVM 152

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L D+ML   ++  V T+ V+I+ L KSG   EA+ +  +M   G  PNV  Y+ LIDG 
Sbjct: 153 MLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGY 212

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C +  ++ AR++FD M  +   P+   YT+L++GY K E  +EA+ L +     G+  D+
Sbjct: 213 CLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDI 272

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +T+++ GL R G    A+ LF  +   G  P+ +    LL    + GN++EA  L  E
Sbjct: 273 VTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQE 332

Query: 246 M 246
           M
Sbjct: 333 M 333



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ GLC+E K +   +L  +M   GL  N      ++++  K+G+ +EAL  L +M 
Sbjct: 135 FTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQME 194

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VV +  LIDG C  G + EA   F  M   G  PNV  YT+L++G CK   IE
Sbjct: 195 KVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIE 254

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L DE  ++ ++PD   +T +I G  +      A  L   +   G   ++  Y  L+
Sbjct: 255 EAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLL 314

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G+L+EA  LF EM    + P+ ++   L+    + G + +  EL + ++  GL
Sbjct: 315 DGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGL 373



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 92/181 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  D+  + TII GLC   +   ++ L   +  +G T N +    L+D   K G   E
Sbjct: 266 KGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEE 325

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A +L  EM  S ++  +V + +LID LCK G +++  + F R+ D GL PNV  YTAL+ 
Sbjct: 326 AFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVG 385

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK+  I  A  LF +M +    PD  AY  +I G+L+H+    A  L   M   G   
Sbjct: 386 ALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSA 445

Query: 184 D 184
           D
Sbjct: 446 D 446



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 101/219 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  Y +++ G C   + E++  LL E    GL  + V  TT++    +AG 
Sbjct: 228 MVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGR 287

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P  A  L   +        ++T+ VL+DGLCK G + EA   F  M    + PN+ +YT 
Sbjct: 288 PLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTI 347

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   I+  + LF  +    + P+   YTAL+    K     EA  L  +M E G
Sbjct: 348 LIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDG 407

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              D  AY  ++ G  +      AR L  EM+ RG   D
Sbjct: 408 CTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSAD 446



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 116/243 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++ ++  Y  II  L    K  ++   L +M++ G   N V  +TL+D Y   G+  E
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDE 220

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+ D M+       V T+  L++G CK   + EA+         GL P++  +T +I 
Sbjct: 221 ARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIIS 280

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC+      A+ LF  +      P+   Y  L+DG  KH + +EA  L   M    V  
Sbjct: 281 GLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKP 340

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +L  YT L+  L +CG +++ + LF  +I  G+ P+     +L+    + G + EA +L 
Sbjct: 341 NLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLF 400

Query: 244 NEM 246
            +M
Sbjct: 401 RKM 403



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 101/204 (49%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           + L  +  + G     + L  E+    IE  + +  +LI+  C    V   +    ++  
Sbjct: 66  SKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILK 125

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            GL P++  +T L++GLC +  +++   L+D+M  R + P+   Y  +I+   K     E
Sbjct: 126 LGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANE 185

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           AL    +M +VG   ++  Y++L+ G    G + EAR +F  M+ +G  P+     SL+ 
Sbjct: 186 ALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMN 245

Query: 229 KHYERGNMDEAIELQNEMMGRGLL 252
            + +   ++EA++L +E + +GL+
Sbjct: 246 GYCKIERIEEAVQLLDETLRKGLV 269



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 69/146 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG ++ GLC     E++  L  EM+ + +  N VI T L+D+  K G+  +   L   ++
Sbjct: 310 YGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLI 369

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  ++  V T+  L+  LCK GL+ EA   F +M + G  P+   Y  +I G  +     
Sbjct: 370 DEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPS 429

Query: 133 RARNLFDEMPKRDMIPDTTAYTALID 158
            AR L +EM  R    D      L D
Sbjct: 430 MARQLVEEMVNRGFSADAATRALLND 455


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 118/250 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK D  +Y  ++ GLC E K E+++LL  +M +  +  N V   TL++   KA  
Sbjct: 35  MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWR 94

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EM       T V++  LIDG CK   +  A D F +M      PNV  YT 
Sbjct: 95  IETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTT 154

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGL K   ++ A  + D M K+ + P+   Y+ LIDG+ K     EA  L  +M   G
Sbjct: 155 LIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQG 214

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  L+  L R   L++A  LF  M  R   P  +   +LL+       +D A 
Sbjct: 215 IAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAH 274

Query: 241 ELQNEMMGRG 250
            L  EM+ +G
Sbjct: 275 RLYAEMIAKG 284



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 117/241 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   YG I+  LC   + +D+   + EM   G+  +  I   ++    +  +  EA  L 
Sbjct: 8   DALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLF 67

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M+  RI   VVT+  LI+GLCK+  +  A + F  M   G  P    Y  LIDG CKK
Sbjct: 68  EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 127

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A+++FD+M + + +P+   YT LIDG  K    + A  + + M + GV  ++  Y
Sbjct: 128 KDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATY 187

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + L+ G  +   + EA  L  +M+ +GI P  +    LL        +++A +L   M  
Sbjct: 188 SCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQ 247

Query: 249 R 249
           R
Sbjct: 248 R 248



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 115/246 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T+I GLC   + E +  L  EM   G     V   TL+D + K  +
Sbjct: 70  MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 129

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + D+M+ S     VVT+  LIDGL KSG V+ A +    M   G+ PNVA Y+ 
Sbjct: 130 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 189

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   ++ A  L ++M  + + P    Y  L++   + +  ++A  L   M +  
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 249

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  Y +L+  L     L  A  L+ EMI +G  PD I   +L       G + EA 
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 309

Query: 241 ELQNEM 246
           EL  +M
Sbjct: 310 ELMEKM 315



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 99/189 (52%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL+ ++EM    I+     +  ++ GLC+   V EA   F +M    ++PNV  Y  LI
Sbjct: 27  DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLI 86

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +GLCK   IE A  LF EM  +  +P   +Y  LIDG+ K +    A ++ ++M      
Sbjct: 87  NGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV 146

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  YT+L+ GLS+ G +Q A  +   M+ +G+ P+      L+    +   +DEA +L
Sbjct: 147 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 206

Query: 243 QNEMMGRGL 251
             +M+ +G+
Sbjct: 207 LEQMVTQGI 215



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 87/171 (50%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           +T+  +++ LCK+  + +A+     M   G+ P+  +Y  ++ GLC++  +E AR LF++
Sbjct: 10  LTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 69

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M K+ + P+   Y  LI+G  K    + A  L   M   G      +Y +L+ G  +   
Sbjct: 70  MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 129

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L  A+ +F +M+    +P+ +   +L+    + G +  A E+ + M+ +G+
Sbjct: 130 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 71/135 (52%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P+   Y  +++ LCK   I+ A    +EM  R + PD   Y  ++ G  + E  +EA  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
             +M +  ++ ++  Y +L+ GL +   ++ A  LF EM G+G +P E+   +L+    +
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 233 RGNMDEAIELQNEMM 247
           + ++  A ++ ++M+
Sbjct: 127 KKDLVAAKDVFDKMV 141



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 52/105 (49%)

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
           PD   Y  +++   K +   +AL     M   G+  D   Y  ++ GL +   ++EAR+L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           F +M+ + I P+ +   +L+    +   ++ A EL  EM G+G +
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYV 111


>gi|260780468|gb|ACX50780.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780484|gb|ACX50788.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 199

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 101/192 (52%), Gaps = 1/192 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+     +  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKRIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGN 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVTF V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID + KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSL 191
           G D  +  YT L
Sbjct: 188 GCDQTVYTYTIL 199



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 91/182 (50%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM + RI+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKRIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   ++ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 86/180 (47%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E  +       + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKRIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  ++ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+   ++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 183



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 70/134 (52%)

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            ++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K  + ++A+ L +RM
Sbjct: 19  AFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRM 78

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            + G   D+  ++ +V GL + G ++EA   F      G+  + +   SL+    + G +
Sbjct: 79  IDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRI 138

Query: 237 DEAIELQNEMMGRG 250
           DEA  L  EM  +G
Sbjct: 139 DEAERLFEEMSEKG 152



 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 54/119 (45%)

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           L+ EM ++ +     A++ +I G  K     E   +   M   G   ++  YT L+ G +
Sbjct: 4   LYQEMDEKRIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           + G++++A  L H MI  G  PD +    ++    + G ++EA++        GL   S
Sbjct: 64  KSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINS 122


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D+  Y  ++ GLC   K +D+  L  E K +GL +N      +M+ Y KA  
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +  +L +E+L  ++E+  + + ++I   C++G V  A+     M   G+ PN A Y++
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G+C    +E A++L DEM K   +P+   YTALI GY K      A +    M    
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 705

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT ++ G  + G++++A  L  +M   GI+PD +    L     +  +MD A 
Sbjct: 706 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAF 765

Query: 241 ELQNEMMGRGL 251
           ++ ++M   GL
Sbjct: 766 KVCDQMATEGL 776



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 113/227 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            K   + +++  YG ++ G C  ++ ED + L +E+    +  N+++   ++ A+ + G 
Sbjct: 561 FKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGN 620

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + AL LL+ M    I     T+  LI G+C  GLV +A      M   G  PNV  YTA
Sbjct: 621 VAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTA 680

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++ A + + EM   ++ P+   YT +IDGY K  + ++A NL  +M E G
Sbjct: 681 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 740

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +  D+  Y  L  G  +   +  A  +  +M   G+  DEI   +L+
Sbjct: 741 IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 113/233 (48%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            +I GLC   K  ++  ++ EM E GL  + +    L+  +   G+      L +EM   
Sbjct: 470 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 529

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            I+  + T+  L+ GLC  G + +AI  +      GL  N+  Y  +++G CK N IE  
Sbjct: 530 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            NLF+E+  + M  ++  Y  +I  + ++ +   AL L   M   G+  +   Y+SL+ G
Sbjct: 590 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 649

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +   G +++A+ L  EM   G +P+ +   +L+  + + G MD A     EM+
Sbjct: 650 VCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMI 702



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 89/191 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K ++ +  +Y  II   C       +  LL  MK  G+  N    ++L+      G   +
Sbjct: 599 KKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVED 658

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L+DEM        VV +  LI G CK G +  A   +  M  F +HPN   YT +ID
Sbjct: 659 AKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMID 718

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +E+A NL  +M +  ++PD   Y  L +G+ K      A  + ++M   G+ +
Sbjct: 719 GYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPV 778

Query: 184 DLNAYTSLVWG 194
           D   YT+LV G
Sbjct: 779 DEITYTTLVHG 789



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 82/160 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  +   Y ++I G+C     ED+K L+ EM++ G   N V  T L+  Y K G+
Sbjct: 631 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQ 690

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A S   EM+   I     T+ V+IDG CK G + +A +   +M + G+ P+V  Y  
Sbjct: 691 MDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNV 750

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           L +G CK N ++ A  + D+M    +  D   YT L+ G+
Sbjct: 751 LTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 109/253 (43%), Gaps = 4/253 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ +L  YG +I GL   + F+    +L EM   G   N V+   L+D Y K G 
Sbjct: 281 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGN 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGL--HPNVAVY 118
              AL + D M+   I  T VT   L+ G CKS  +  A +    +   GL  HP+    
Sbjct: 341 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY- 399

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            +++  LCKK     A      M  R+  P     T L+ G  K     EA  L  R+ E
Sbjct: 400 -SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLE 458

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G         +L+ GL   G L EA  +  EM+ RG+  D I   +L+      G ++ 
Sbjct: 459 KGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG 518

Query: 239 AIELQNEMMGRGL 251
              L+ EM  RG+
Sbjct: 519 CFRLREEMTKRGI 531



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 114/252 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N +    L   ++ GLC + K  ++  L   + E G  A+ V    L+     AG+
Sbjct: 421 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 480

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  ++ EML+  + +  +T+  LI G C  G V         M   G+ P++  Y  
Sbjct: 481 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 540

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    ++ A  L+DE     +I +   Y  +++GY K    ++  NL N +    
Sbjct: 541 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 600

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++L+   Y  ++    + G++  A  L   M  +GILP+     SL+      G +++A 
Sbjct: 601 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 660

Query: 241 ELQNEMMGRGLL 252
            L +EM   G +
Sbjct: 661 HLIDEMRKEGFV 672



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 5/230 (2%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           ++FE    +   M E G   +    T +++A  K G+   A+ L  +M    I   VVT+
Sbjct: 200 NEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTY 258

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             +I+GLC++G +  A +   +M   G+ PN+  Y ALI+GL K N  ++  ++ DEM  
Sbjct: 259 NCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIG 318

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               P+   +  LIDGY K  + + AL +K+ M    +        SL+ G  +   ++ 
Sbjct: 319 AGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEH 378

Query: 204 ARVLFHEMIGRG--ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A     E++  G  I PD   C S++    ++     A      M+ R  
Sbjct: 379 AENALEEILSSGLSIHPDN--CYSVVHWLCKKFRYHSAFRFTKMMLSRNF 426



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  + W LC + ++  +      M       + ++ T L+    K G+  EA  L   +L
Sbjct: 399 YSVVHW-LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 457

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +     + VT   LI GLC +G + EA      M + GL  +   Y ALI G C +  +E
Sbjct: 458 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 517

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L +EM KR + PD   Y  L+ G        +A+ L +     G+  +++ Y  ++
Sbjct: 518 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 577

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   +++   LF+E++ + +  + I+   ++K H + GN+  A++L   M  +G+L
Sbjct: 578 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL 637



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 100/204 (49%), Gaps = 1/204 (0%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C   + +  KA E  +   +   M +      V +F  +I+ LCK G +  AI+ F +M 
Sbjct: 189 CNFXLSSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVINALCKGGKMENAIELFMKME 247

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             G+ PNV  Y  +I+GLC+   ++ A  L ++M  + + P+   Y ALI+G +K   F 
Sbjct: 248 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 307

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +  ++ + M   G + ++  + +L+ G  + G+++ A  +   MI + I P  +   SL+
Sbjct: 308 KVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLM 367

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
           +   +   ++ A     E++  GL
Sbjct: 368 QGFCKSDQIEHAENALEEILSSGL 391



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 108/242 (44%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +  +I  LC   K E++  L  +M++ G++ N V    +++   + G    A  L 
Sbjct: 219 DVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELK 278

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M    ++  + T+  LI+GL K     +       M   G +PNV V+  LIDG CK 
Sbjct: 279 EKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKM 338

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             IE A  + D M  +++ P +    +L+ G+ K +  + A N    +   G+ +  +  
Sbjct: 339 GNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC 398

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            S+V  L +      A      M+ R   P ++L   L+    + G   EA EL   ++ 
Sbjct: 399 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLE 458

Query: 249 RG 250
           +G
Sbjct: 459 KG 460



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI        +++ G C   + E ++  L E+  +GL+ +   C +++    K   
Sbjct: 351 MISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFR 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A      ML      + +   +L+ GLCK G   EA + + R+ + G   +     A
Sbjct: 411 YHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNA 470

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    +  A  +  EM +R +  D   Y ALI G+      +    L+  MT+ G
Sbjct: 471 LIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 530

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  L+ GL   G L +A  L+ E    G++ + I    ++ + Y + N  E +
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN-IHTYGIMMEGYCKANRIEDV 589

Query: 241 E-LQNEMMGRGL 251
           E L NE++ + +
Sbjct: 590 ENLFNELLSKKM 601


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 36/283 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M     + DL  Y  +  GLC   K +++  L  EM+  G L  + V   TL DA FK  
Sbjct: 300 MTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCR 359

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             S+AL LL+EM +  ++ T+VT  ++I GLCK G +  A+    +M D GL P+V  Y 
Sbjct: 360 CSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYN 419

Query: 120 ALIDGLCKKNCIERARNLFDEM-----------------------------------PKR 144
            LI   CK   I +A  L DEM                                   P+R
Sbjct: 420 TLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQR 479

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
             +PD  +Y  ++  Y K  + + AL L + M E  +   ++ Y +L+ GLSR G L+EA
Sbjct: 480 GFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEA 539

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
               +E++ +G++PD+     ++  + + G+++ A +  N+M+
Sbjct: 540 IDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMV 582



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 124/255 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K D     T+++ LC E ++E+++ LL    + G   + V   T+M AYFK   
Sbjct: 441 MVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L DEM++ ++  ++ T+  LI GL + G ++EAID    + + GL P+   Y  
Sbjct: 501 SEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNI 560

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   CK+  +E A    ++M +    PD      L++G   +    +AL L     E G
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKG 620

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +D+  Y +L+  + + G +  A   F +M  RG+ PD      +L    E G  +EA 
Sbjct: 621 KKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQ 680

Query: 241 ELQNEMMGRGLLSGS 255
            + +++   G LS S
Sbjct: 681 NMLHKLAESGTLSQS 695



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 123/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +KA L  +  +I GLC + + E +   L++M ++GL  + +   TL+ A+ KAG 
Sbjct: 371 MREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGN 430

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A +L+DEM+   +++   T   ++  LCK     EA       P  G  P+   Y  
Sbjct: 431 IAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGT 490

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    K+   E A  L+DEM ++ + P  + Y  LI G  +    KEA++  N + E G
Sbjct: 491 VMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKG 550

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  ++    + G L+ A    ++M+     PD + C +L+      G +D+A+
Sbjct: 551 LVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKAL 610

Query: 241 ELQNEMMGRG 250
           +L    + +G
Sbjct: 611 KLFESWVEKG 620



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 114/240 (47%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++   C +    D+   LS M+  GL+ + V   TL++A+ + G   EA +LL  M 
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 266

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  T  T+  L+    + G +++A      M   G  P++  Y  L  GLC+   ++
Sbjct: 267 KDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVD 326

Query: 133 RARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            A  L DEM +   ++PD   Y  L D   K     +AL L   M E GV   L  +  +
Sbjct: 327 EAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIV 386

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL + G L+ A    ++M   G+ PD I   +L+  H + GN+ +A  L +EM+ RGL
Sbjct: 387 IKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGL 446



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 36/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G  +  D   Y T++   C +    +++ LL+ MK++G+        TL+ AY + G 
Sbjct: 230 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGW 289

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYT 119
             +A  +++ M  +  E  + T+ VL  GLC++G V EA      M   G L P+V  Y 
Sbjct: 290 IKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYN 349

Query: 120 ALID-----------------------------------GLCKKNCIERARNLFDEMPKR 144
            L D                                   GLCK   +E A    ++M   
Sbjct: 350 TLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADD 409

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   Y  LI  + K  +  +A  L + M   G+ LD     ++++ L +    +EA
Sbjct: 410 GLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEA 469

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + L      RG +PDE+   +++  +++  N + A+ L +EM+ + L
Sbjct: 470 QGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKL 516



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 10/235 (4%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  D   Y  II   C E   E++    ++M EN    + V C TLM+     G+  +
Sbjct: 549 KGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDK 608

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L +  ++   +V V+T+  LI  +CK G V  A+ +F  M   GL P+   Y  ++ 
Sbjct: 609 ALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLS 668

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV-- 181
            L +    E A+N+  ++ +       T   +     LK  S  EA + K+  TE     
Sbjct: 669 ALSEAGRTEEAQNMLHKLAE-----SGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVE 723

Query: 182 ---DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
              D    AYT LV GL   G  +EA+ +  EM+ +G+  D    I+L++   +R
Sbjct: 724 NPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKR 778



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 1/199 (0%)

Query: 54  AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
           A   +  P  +L     ++  R+     TF +L+   C  G + +A+     M  FGL P
Sbjct: 178 ARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSP 237

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           +   Y  L++  C+K  +  AR L   M K  + P    Y  L+  Y +    K+A  + 
Sbjct: 238 DAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVV 297

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG-ILPDEILCISLLKKHYE 232
             MT  G + DL  Y  L  GL + G + EA  L  EM   G +LPD +   +L    ++
Sbjct: 298 EAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFK 357

Query: 233 RGNMDEAIELQNEMMGRGL 251
                +A+ L  EM  +G+
Sbjct: 358 CRCSSDALRLLEEMREKGV 376



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 35/199 (17%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   + K D+    T++ GLC+  K + +  L     E G   + +   TL+    K G+
Sbjct: 581 MVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGD 640

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG---------- 110
              AL    +M    ++    T+ V++  L ++G   EA +   ++ + G          
Sbjct: 641 VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPL 700

Query: 111 LHPNVA-------------------------VYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L P+                            YT L++GLC     + A+ + DEM ++ 
Sbjct: 701 LKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKG 760

Query: 146 MIPDTTAYTALIDGYLKHE 164
           M  D++ Y  L++G +K +
Sbjct: 761 MSVDSSTYITLMEGLVKRQ 779


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  + +II  LC     ++++LLL +M +NG+  N V  T+++  Y   G 
Sbjct: 142 MMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGR 201

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +  EM    +   +V++   +D LCK G  +EA + F  M   G  PN+  Y  
Sbjct: 202 WEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGI 261

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   + C     + F+ M    ++ +   +T LID Y K     EA+ + + M   G
Sbjct: 262 LLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQG 321

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y++L+  L R G L +A   F++MIG G+ P+ ++  SL++     G++ +A 
Sbjct: 322 LSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAK 381

Query: 241 ELQNEMMGRGL 251
           EL  EMM  G+
Sbjct: 382 ELVYEMMNNGI 392



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + ++  YG ++ G   E  F D     + MK +G+ AN ++ T L+DAY K G 
Sbjct: 247 MAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGM 306

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +L EM    +   V T+  LI  LC+ G + +A+D F +M   G+ PN  VY +
Sbjct: 307 MDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHS 366

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI G C    + +A+ L  EM    +  P+   + +++    K     +A ++ + + ++
Sbjct: 367 LIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDI 426

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  + +L+ G    G + +A  +   MI  GI PD     +L+  +++ G +D+ 
Sbjct: 427 GERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDG 486

Query: 240 IELQNEM 246
           + L  EM
Sbjct: 487 LNLFREM 493



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 122/241 (50%), Gaps = 2/241 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVIC-TTLMDAYFKAGEPSEALSLLDE 70
           Y  ++  LC +++ + +  LL  M KE G+ +  V+   T++  +FK G+  +A +L  E
Sbjct: 82  YAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHE 141

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M+       VVT   +I+ LCK+  V  A     +M D G+ PN   YT++I G      
Sbjct: 142 MMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGR 201

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
            E A  +F EM  R +IPD  ++ + +D   KH   KEA  +   M   G   ++  Y  
Sbjct: 202 WEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGI 261

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ G +  G   +    F+ M G GI+ + ++   L+  + +RG MDEA+ + +EM G+G
Sbjct: 262 LLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQG 321

Query: 251 L 251
           L
Sbjct: 322 L 322



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 114/243 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G   E K   +  L  EM + G   + V   ++++A  KA     A  LL
Sbjct: 115 DVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLL 174

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+D+ +    VT+  +I G    G   EA   F  M   GL P++  + + +D LCK 
Sbjct: 175 RQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKH 234

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + A  +F  M  +   P+   Y  L+ GY     F + ++  N M   G+  +   +
Sbjct: 235 GRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVF 294

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T L+   ++ G + EA ++  EM G+G+ PD     +L+      G + +A++  N+M+G
Sbjct: 295 TILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIG 354

Query: 249 RGL 251
            G+
Sbjct: 355 TGV 357



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 124/245 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           ++D+ ++ T+I G C+  +   +  +L  M   G+  +T    TL++ YFK+G   + L+
Sbjct: 429 RSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLN 488

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM D +I+ T VT+ +++DGL ++G    A      M   G   ++  Y  ++ GLC
Sbjct: 489 LFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLC 548

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           + NC + A  +F ++   ++  + T    +I+     +  +EA +L + +++ G+  + +
Sbjct: 549 RNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNAS 608

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y  ++  L + G ++EA  +F  M   G  P   L    ++   E+G + +A    +++
Sbjct: 609 TYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKV 668

Query: 247 MGRGL 251
            G+ +
Sbjct: 669 DGKSI 673



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 3/251 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +KAD     T++  LC   + +D+ K+LL  M E G   +      ++          +A
Sbjct: 39  LKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQA 98

Query: 65  LSLLDEML--DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           L LL  M   +      VVT+  +I G  K G + +A + +  M   G  P+V  + ++I
Sbjct: 99  LDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSII 158

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LCK   ++ A  L  +M    + P+   YT++I GY     ++EA  +   MT  G+ 
Sbjct: 159 NALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLI 218

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ ++ S +  L + G  +EA  +F+ M  +G  P+ +    LL  +   G   + +  
Sbjct: 219 PDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSF 278

Query: 243 QNEMMGRGLLS 253
            N M G G+++
Sbjct: 279 FNTMKGDGIVA 289



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 111/256 (43%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLT-ANTVICTTLMDAYFKAG 59
           M G  ++ +  +Y ++I G C       +K L+ EM  NG+   N     +++ +  K G
Sbjct: 352 MIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEG 411

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              +A  + D + D      ++ F  LIDG C  G + +A      M   G+ P+   Y 
Sbjct: 412 RVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYN 471

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L++G  K   I+   NLF EM  + + P T  Y  ++DG  +      A  + + M   
Sbjct: 472 TLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGC 531

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G  + L  Y  ++ GL R     EA V+F ++    +  +     +++   Y     +EA
Sbjct: 532 GTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEA 591

Query: 240 IELQNEMMGRGLLSGS 255
            +L + +   GL+  +
Sbjct: 592 KDLFSAISDSGLVPNA 607



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/250 (20%), Positives = 117/250 (46%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + +I+  +C E +  D+  +   +K+ G  ++ ++  TL+D Y   GE  +A S
Sbjct: 394 RPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFS 453

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +LD M+ + I     T+  L++G  KSG + + ++ F  M D  + P    Y  ++DGL 
Sbjct: 454 VLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLF 513

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +      A+ +  EM           Y  ++ G  ++    EA+ +  ++  + V  ++ 
Sbjct: 514 RAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNIT 573

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
              +++  +      +EA+ LF  +   G++P+      +++   + G+++EA  + + M
Sbjct: 574 TLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSM 633

Query: 247 MGRGLLSGSK 256
              G    S+
Sbjct: 634 EKSGCAPCSR 643



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 114/252 (45%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ +  D+  + + +  LC   + +++  +   M   G   N V    L+  Y   G 
Sbjct: 212 MTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGC 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++ +S  + M    I    + F +LID   K G++ EA+     M   GL P+V  Y+ 
Sbjct: 272 FADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYST 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC+   +  A + F++M    + P+T  Y +LI G+  H    +A  L   M   G
Sbjct: 332 LISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNG 391

Query: 181 VDL-DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           +   ++  + S+V  + + G + +A  +F  +   G   D I+  +L+  +   G M +A
Sbjct: 392 IPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKA 451

Query: 240 IELQNEMMGRGL 251
             + + M+  G+
Sbjct: 452 FSVLDAMISAGI 463



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 105/242 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D   Y T++ G     + +D   L  EM +  +   TV    ++D  F+AG 
Sbjct: 458 MISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGR 517

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +L EM+     V++ T+ +++ GLC++    EAI  F ++    +  N+     
Sbjct: 518 TVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNT 577

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ +      E A++LF  +    ++P+ + Y  +I   LK  S +EA N+ + M + G
Sbjct: 578 MINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSG 637

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                      +  L   G + +A     ++ G+ I  +      LL     +GN  E I
Sbjct: 638 CAPCSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSISLEASTSSLLLSLFSGKGNYREQI 697

Query: 241 EL 242
           +L
Sbjct: 698 QL 699



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 38/212 (17%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFG---------------------------------- 104
           T+ T+ V+++G C++      + +FG                                  
Sbjct: 7   TIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVL 66

Query: 105 --RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGY 160
             RM + G  P+   Y  ++  LC  N  ++A +L   M K + +  PD   Y  +I G+
Sbjct: 67  LRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGF 126

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K     +A NL + M + G   D+  + S++  L +   +  A +L  +M+  G+ P++
Sbjct: 127 FKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNK 186

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +   S++  +   G  +EA ++  EM GRGL+
Sbjct: 187 VTYTSMIHGYSTLGRWEEATKMFREMTGRGLI 218


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 138/270 (51%), Gaps = 21/270 (7%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KNIK D+  +  ++ GLC E + + ++ +L+ M +  +  + +   +LMD YF   + ++
Sbjct: 183 KNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENK 242

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  + + M    +   V ++ V+I+GLCK+ +V EA++    M    + PN   Y++LID
Sbjct: 243 ATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLID 302

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K   I  A +L +EM  R    D   Y +L+D   K+    +A+ L  ++ + G+  
Sbjct: 303 GLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQP 362

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL--CISLLKKH----------- 230
           D+  YT LV GL + G L++A+ ++  ++ +G   D +    +SLL K            
Sbjct: 363 DIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVT 422

Query: 231 --------YERGNMDEAIELQNEMMGRGLL 252
                   +E    D+A+EL  EM+ RGLL
Sbjct: 423 FEILIRALFENDMNDKAVELLREMIARGLL 452



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 128/246 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++ +Y TII+ LC +    D+  L S+M    ++ + +   TLM      G   EA+
Sbjct: 115 VQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAV 174

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L ++ML   I+  + TF +L+DGLCK G +++A +    M    + P+V  Y +L+DG 
Sbjct: 175 GLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGY 234

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
                  +A  +F+ M +R + PD  +Y+ +I+G  K +   EA+NL   M    +  + 
Sbjct: 235 FLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNT 294

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+SL+ GL + G + +A  L +EM  RG   D I   SLL    +   +D+AI L  +
Sbjct: 295 VTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTK 354

Query: 246 MMGRGL 251
           +  +G+
Sbjct: 355 IKDQGI 360



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 126/238 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  +L  +    +  N V+ +T++ +  K     +A  L  +ML
Sbjct: 87  YGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQML 146

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             RI   V+T+  L+ G    G ++EA+  F +M    + P++  +  L+DGLCK+  ++
Sbjct: 147 LKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMK 206

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +ARN+   M K+ + PD   Y +L+DGY   +   +A  + N M   GV  D+++Y+ ++
Sbjct: 207 KARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMI 266

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL +   + EA  L  EM  + + P+ +   SL+   ++ G + +A +L NEM  RG
Sbjct: 267 NGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRG 324



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 14/217 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y  +I GLC     +++  LL EM    +  NTV  ++L+D   K+G 
Sbjct: 250 MARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGR 309

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L++EM +      V+T+  L+D LCK+  V +AI    ++ D G+ P++  YT 
Sbjct: 310 IFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTI 369

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   ++ A+ ++  +              LI GY     F +AL+L ++M + G
Sbjct: 370 LVDGLCKNGRLKDAQEVYQIL--------------LIKGYHLDSLFDKALSLLSKMEDNG 415

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
              +   +  L+  L       +A  L  EMI RG+L
Sbjct: 416 CTPNPVTFEILIRALFENDMNDKAVELLREMIARGLL 452


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D+  Y  ++ GLC   K +D+  L  E K +GL +N      +M+ Y KA  
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 608

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +  +L +E+L  ++E+  + + ++I   C++G V  A+     M   G+ PN A Y++
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G+C    +E A++L DEM K   +P+   YTALI GY K      A +    M    
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 728

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT ++ G  + G++++A  L  +M   GI+PD +    L     +  +MD A 
Sbjct: 729 IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAF 788

Query: 241 ELQNEMMGRGL 251
           ++ ++M   GL
Sbjct: 789 KVCDQMATEGL 799



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 113/227 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            K   + +++  YG ++ G C  ++ ED + L +E+    +  N+++   ++ A+ + G 
Sbjct: 584 FKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGN 643

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + AL LL+ M    I     T+  LI G+C  GLV +A      M   G  PNV  YTA
Sbjct: 644 VAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTA 703

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++ A + + EM   ++ P+   YT +IDGY K  + ++A NL  +M E G
Sbjct: 704 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 763

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +  D+  Y  L  G  +   +  A  +  +M   G+  DEI   +L+
Sbjct: 764 IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 810



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 113/234 (48%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            +I GLC   K  ++  ++ EM E GL  + +    L+  +   G+      L +EM   
Sbjct: 493 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 552

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            I+  + T+  L+ GLC  G + +AI  +      GL  N+  Y  +++G CK N IE  
Sbjct: 553 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 612

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            NLF+E+  + M  ++  Y  +I  + ++ +   AL L   M   G+  +   Y+SL+ G
Sbjct: 613 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHG 672

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           +   G +++A+ L  EM   G +P+ +   +L+  + + G MD A     EM+ 
Sbjct: 673 VCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 726



 Score = 98.6 bits (244), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 89/192 (46%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K ++ +  +Y  II   C       +  LL  MK  G+  N    ++L+      G   
Sbjct: 621 SKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVE 680

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L+DEM        VV +  LI G CK G +  A   +  M  F +HPN   YT +I
Sbjct: 681 DAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMI 740

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG CK   +E+A NL  +M +  ++PD   Y  L +G+ K      A  + ++M   G+ 
Sbjct: 741 DGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLP 800

Query: 183 LDLNAYTSLVWG 194
           +D   YT+LV G
Sbjct: 801 VDEITYTTLVHG 812



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 82/160 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  +   Y ++I G+C     ED+K L+ EM++ G   N V  T L+  Y K G+
Sbjct: 654 MKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQ 713

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A S   EM+   I     T+ V+IDG CK G + +A +   +M + G+ P+V  Y  
Sbjct: 714 MDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNV 773

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           L +G CK N ++ A  + D+M    +  D   YT L+ G+
Sbjct: 774 LTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 110/253 (43%), Gaps = 4/253 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ +L  YG +I GL   + F+    +L EM  +G   N V+   L+D Y K G 
Sbjct: 304 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGN 363

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGL--HPNVAVY 118
              AL + D M+   I  T VT   L+ G CKS  +  A +    +   GL  HP+    
Sbjct: 364 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCY- 422

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            +++  LCKK     A      M  R+  P     T L+ G  K     EA  L  R+ E
Sbjct: 423 -SVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLE 481

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G         +L+ GL   G L EA  +  EM+ RG+  D I   +L+      G ++ 
Sbjct: 482 KGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEG 541

Query: 239 AIELQNEMMGRGL 251
              L+ EM  RG+
Sbjct: 542 CFRLREEMTKRGI 554



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 114/252 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N +    L   ++ GLC + K  ++  L   + E G  A+ V    L+     AG+
Sbjct: 444 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 503

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  ++ EML+  + +  +T+  LI G C  G V         M   G+ P++  Y  
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    ++ A  L+DE     +I +   Y  +++GY K    ++  NL N +    
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 623

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++L+   Y  ++    + G++  A  L   M  +GILP+     SL+      G +++A 
Sbjct: 624 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 683

Query: 241 ELQNEMMGRGLL 252
            L +EM   G +
Sbjct: 684 HLIDEMRKEGFV 695



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 1/204 (0%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  L+ +  KA E  +   +   M +      V +F  +I+ LCK G +  AI+ F +M 
Sbjct: 212 CNFLLSSLVKANEFEKCCEVFRVMSEGACP-DVFSFTNVINALCKGGKMENAIELFMKME 270

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             G+ PNV  Y  +I+GLC+   ++ A  L ++M  + + P+   Y ALI+G +K   F 
Sbjct: 271 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFD 330

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +  ++ + M   G + ++  + +L+ G  + G+++ A  +   MI + I P  +   SL+
Sbjct: 331 KVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLM 390

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
           +   +   ++ A     E++  GL
Sbjct: 391 QGFCKSDQIEHAENALEEILSSGL 414



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 5/230 (2%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           ++FE    +   M E G   +    T +++A  K G+   A+ L  +M    I   VVT+
Sbjct: 223 NEFEKCCEVFRVMSE-GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTY 281

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             +I+GLC++G +  A +   +M   G+ PN+  Y ALI+GL K N  ++  ++ DEM  
Sbjct: 282 NCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIG 341

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               P+   +  LIDGY K  + + AL +K+ M    +        SL+ G  +   ++ 
Sbjct: 342 SGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEH 401

Query: 204 ARVLFHEMIGRG--ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A     E++  G  I PD   C S++    ++     A      M+ R  
Sbjct: 402 AENALEEILSSGLSIHPDN--CYSVVHWLCKKFRYHSAFRFTKMMLSRNF 449



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 111/240 (46%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  + W LC + ++  +      M       + ++ T L+    K G+  EA  L   +L
Sbjct: 422 YSVVHW-LCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 480

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +     + VT   LI GLC +G + EA      M + GL  +   Y ALI G C +  +E
Sbjct: 481 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 540

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L +EM KR + PD   Y  L+ G        +A+ L +     G+  +++ Y  ++
Sbjct: 541 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMM 600

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   +++   LF+E++ + +  + I+   ++K H + GN+  A++L   M  +G+L
Sbjct: 601 EGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGIL 660



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 108/242 (44%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +  +I  LC   K E++  L  +M++ G++ N V    +++   + G    A  L 
Sbjct: 242 DVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELK 301

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M    ++  + T+  LI+GL K     +       M   G +PNV V+  LIDG CK 
Sbjct: 302 EKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKM 361

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             IE A  + D M  +++ P +    +L+ G+ K +  + A N    +   G+ +  +  
Sbjct: 362 GNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNC 421

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            S+V  L +      A      M+ R   P ++L   L+    + G   EA EL   ++ 
Sbjct: 422 YSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLE 481

Query: 249 RG 250
           +G
Sbjct: 482 KG 483



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI        +++ G C   + E ++  L E+  +GL+ +   C +++    K   
Sbjct: 374 MISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFR 433

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A      ML      + +   +L+ GLCK G   EA + + R+ + G   +     A
Sbjct: 434 YHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNA 493

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    +  A  +  EM +R +  D   Y ALI G+      +    L+  MT+ G
Sbjct: 494 LIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRG 553

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  L+ GL   G L +A  L+ E    G++ + I    ++ + Y + N  E +
Sbjct: 554 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN-IHTYGIMMEGYCKANRIEDV 612

Query: 241 E-LQNEMMGRGL 251
           E L NE++ + +
Sbjct: 613 ENLFNELLSKKM 624


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 124/252 (49%), Gaps = 5/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    K D+  + T+I GLC   + ++++ +L EM+ +G  AN V   TL++    AG 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD-FGLHPNVAVYT 119
             EA+ ++  M  +       T+  +I G CKSG +  A  +   M    G  P+   Y+
Sbjct: 140 SGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 120 ALIDGLCKKNCIERARNLFDEM-PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            LI+GLCK + + +A  L  EM  ++D      A+  L+DGY K +    A  L + M E
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G   D+  Y++++ GL RCG + +   L  +M+ RG  PD +    L+    + G M E
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 239 AIELQNEMMGRG 250
           A  L   M+  G
Sbjct: 317 ACRLVKRMLEDG 328



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 6/240 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAG 59
           M+G     D   Y  II G C   + + +   L EMK+  G + +T   + L++   K+ 
Sbjct: 147 MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206

Query: 60  EPSEALSLLDEMLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
              +A  LL EM+  +    +VV F  L+DG CK+  +  A +    M + G  P+V  Y
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +IDGLC+   +++   L ++M  R   PD   YT L+ G  K     EA  L  RM E
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERG 234
            G   +   Y+ +  GL +   L  A  L   +  +G + D    E L +S+ K+  +R 
Sbjct: 327 DGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKRLLDRA 386



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 5/201 (2%)

Query: 51  LMDAYFKAGEPSEALSLLDEM-LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           L+ A+  AGE   A+ LL EM     +  T   +   +  LCKSG V EA++    M D 
Sbjct: 24  LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
              P+V  +  LI GLCK   ++ A+ + DEM +     +   Y  LI+G        EA
Sbjct: 84  ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLLK 228
           + +   MT      D   Y +++ G  + G +  A     EM  R G  PD      L+ 
Sbjct: 144 VLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 229 KHYERGNMDEAIELQNEMMGR 249
              +  N+ +A EL  EM+GR
Sbjct: 201 GLCKSSNLRKADELLQEMIGR 221


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  128 bits (321), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+  + ++  YGT++ GLC + +  ++  L SEM   G++ +     +L+ A     E
Sbjct: 152 MVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCE 211

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL+EM+ S+I   VV+  +++D LCK G V EA D    M   G+ P+V  Y A
Sbjct: 212 WKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAA 271

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A  +FD M +   + +  +Y  LI+GY K +   +A+ L   M    
Sbjct: 272 LMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQE 331

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y++L+ GL   G LQ+A  LF+EM+  G +P+ +    LL    +   + EA+
Sbjct: 332 LIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAM 391

Query: 241 ELQNEMMGRGL 251
            L   + G  L
Sbjct: 392 ALLKAIEGSNL 402



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 134/287 (46%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  Y ++I  LC   +++    LL+EM ++ +  N V    ++DA  K G+
Sbjct: 187 MIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGK 246

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  ++D M+   +E  VVT+  L+DG C    + EA+  F  M   G   NV  Y  
Sbjct: 247 VTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNT 306

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   I++A  LF+EM ++++IP+T  Y+ LI G       ++A+ L N M   G
Sbjct: 307 LINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACG 366

Query: 181 -----------------------------------VDLDLNAYTSLVWGLSRCGHLQEAR 205
                                              +D D+  Y   + G+ R G L+ AR
Sbjct: 367 QIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAAR 426

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            LF  +  RG+ PD      +++   +RG +DEA +L  EM   G L
Sbjct: 427 DLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCL 473



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 117/246 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  Y  ++ G C+ S+ +++  +   M  NG   N V   TL++ Y K     +A+
Sbjct: 262 VEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAM 321

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +EM    +    +T+  LI GLC  G +++AI  F  M   G  PN+  Y+ L+D L
Sbjct: 322 YLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYL 381

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK + +  A  L   +   ++ PD   Y   IDG  +    + A +L + +   G+  D+
Sbjct: 382 CKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDV 441

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +  ++ GL + G L EA  LF EM   G L +     ++ +   +      AI+L  E
Sbjct: 442 WTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEE 501

Query: 246 MMGRGL 251
           M+ RG 
Sbjct: 502 MLARGF 507



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 115/244 (47%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T++ GLC+  K  ++  +  +M   G   N V   TLM+   K  + +EAL+
Sbjct: 123 QPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALN 182

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM+   I   + T+  LI  LC     +        M    + PNV     ++D LC
Sbjct: 183 LFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALC 242

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+  +  A ++ D M +  + PD   Y AL+DG+       EA+ + + M   G   ++ 
Sbjct: 243 KEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVV 302

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +Y +L+ G  +   + +A  LF EM  + ++P+ +   +L+      G + +AI L NEM
Sbjct: 303 SYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEM 362

Query: 247 MGRG 250
           +  G
Sbjct: 363 VACG 366



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 106/219 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M   G+  +    T +++++        ALS+L ++L    +    TF  L+ GLC
Sbjct: 78  LSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLC 137

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + EA+D F +M   G  PNV  Y  L++GLCK   +  A NLF EM  + + PD  
Sbjct: 138 VVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIF 197

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y +LI        +K    L N M +  +  ++ +   +V  L + G + EA  +   M
Sbjct: 198 TYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMM 257

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I  G+ PD +   +L+  H  R  MDEA+++ + M+  G
Sbjct: 258 IQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNG 296



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 1/229 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + + +  L  EM    L  NT+  +TL+      G   +A++L +EM+
Sbjct: 304 YNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMV 363

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+ +L+D LCK+  + EA+     +    L P+V VY   IDG+C+   +E
Sbjct: 364 ACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLE 423

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR+LF  +  R + PD   +  +I G  K     EA  L   M E G   +   Y ++ 
Sbjct: 424 AARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTIT 483

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            GL +      A  L  EM+ RG   D +   +LL K      +D++++
Sbjct: 484 QGLLQNNKTSRAIQLLEEMLARGFSAD-VSTTALLVKMLSDDGLDQSVK 531



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 97/200 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC   + +D+  L +EM   G   N V  + L+D   K    +EA++LL  + 
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE 398

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S ++  V  + + IDG+C++G +  A D F  +   GL P+V  +  +I GLCK+  ++
Sbjct: 399 GSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLD 458

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM +   + +   Y  +  G L++     A+ L   M   G   D++    LV
Sbjct: 459 EASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLV 518

Query: 193 WGLSRCGHLQEARVLFHEMI 212
             LS  G  Q  + +  E +
Sbjct: 519 KMLSDDGLDQSVKQILCEFM 538



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 91/201 (45%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+ +  K    S  LSL  +M    I   V T  ++I+  C    V  A+    ++   G
Sbjct: 62  LLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLG 121

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+ A +T L+ GLC    I  A ++FD+M      P+   Y  L++G  K     EAL
Sbjct: 122 HQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEAL 181

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           NL + M   G+  D+  Y SL+  L      +    L +EM+   I+P+ +    ++   
Sbjct: 182 NLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDAL 241

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + G + EA ++ + M+  G+
Sbjct: 242 CKEGKVTEAHDVVDMMIQGGV 262



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 84/190 (44%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +ALS    ML       +  F  L+  + K       +    +M  FG+ P+V   T +I
Sbjct: 39  DALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVI 98

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C  N ++ A ++  ++ K    PDT  +T L+ G        EAL++ ++M   G  
Sbjct: 99  NSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQ 158

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL +   L EA  LF EMI +GI PD     SL+              L
Sbjct: 159 PNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTL 218

Query: 243 QNEMMGRGLL 252
            NEM+   ++
Sbjct: 219 LNEMVKSKIM 228



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 36/170 (21%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++G N+  D+ +Y   I G+C     E ++ L S +   GL  +                
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPD---------------- 440

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                              V T  ++I GLCK GL+ EA   F  M + G   N   Y  
Sbjct: 441 -------------------VWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNT 481

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           +  GL + N   RA  L +EM  R    D +  TAL+   L  +   +++
Sbjct: 482 ITQGLLQNNKTSRAIQLLEEMLARGFSADVST-TALLVKMLSDDGLDQSV 530


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 126/239 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T I  L    +  +S  LL EM   G+  + V+ TT+MD   K G+  EA  +L   L
Sbjct: 332 YCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHAL 391

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I    VT+ VL+D  C++G +  A     +M +  + PNV  ++++++GL K+ CI 
Sbjct: 392 SDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIA 451

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A     +M    + P+   Y  LIDG+ K +  + AL++   M   GV+ +     SLV
Sbjct: 452 KAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLV 511

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G+++EA  LF +M  RG+L D +   +L+   ++ GNM  A+++  E+M R L
Sbjct: 512 NGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNL 570



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 124/281 (44%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL +Y T++  L  E K E++K +L     + +T N V  T L+DA+ +AG 
Sbjct: 355 MVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGN 414

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +L +M +  +   VVTF  +++GL K G + +A  Y  +M D G+ PNV  Y  
Sbjct: 415 IDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGT 474

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           LID                                   GL K   IE A  LF +M +R 
Sbjct: 475 LIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERG 534

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++ D   Y  L+DG  K  +   AL +   + E  +  D   Y   +  L R G   EA+
Sbjct: 535 LLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAK 594

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
               EM   G+ PD+    +++      GN  +A++L NEM
Sbjct: 595 SFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEM 635



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 110/234 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C       +  ++  M   GL+ + V   TL+  +F +G+   A  + + M 
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +E +VVT   LI   CK   + EA   +  M   G+ P+V   +AL+DGLC+     
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFS 311

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM K  + P+   Y   ID   K +   E+L L   M   GV +DL  YT+++
Sbjct: 312 EAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVM 371

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             L + G ++EA+ +    +   I P+ +    L+  H   GN+D A ++  +M
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQM 425



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 126/286 (44%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++A+  +  +++ GL      E+++ L  +M E GL  + V   TLMD  FK G 
Sbjct: 495 MLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGN 554

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  E+++  +    V + V I+ LC+ G   EA  +   M + GL P+ A Y  
Sbjct: 555 MPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNT 614

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   C++    +A  L +EM    + P+   YT L+ G L+    ++A  L N M   G
Sbjct: 615 MISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAG 674

Query: 181 -----------------------------------VDLDLNAYTSLVWGLSRCGHLQEAR 205
                                              +  D+  Y +LV  L   G  ++A 
Sbjct: 675 FTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKAT 734

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           ++  EM+GRGI PD I   +L+  H +  ++D A     +M+ +GL
Sbjct: 735 IVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGL 780



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 131/324 (40%), Gaps = 70/324 (21%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N+  D  +Y   I  LC   KF ++K  L EM+  GL  +     T++ A  + G  S+
Sbjct: 568 RNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSK 627

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA------------------------ 99
           AL LL+EM  S I+  ++T+  L+ GL ++G+V +A                        
Sbjct: 628 ALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQ 687

Query: 100 -----------IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                      ++    M   GLH ++ VY  L+  LC      +A  + DEM  R + P
Sbjct: 688 ACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAP 747

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV-- 206
           DT  + ALI G+ K      A     +M   G+  ++  + +L+ GL   G + EA    
Sbjct: 748 DTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVI 807

Query: 207 ---------------------------------LFHEMIGRGILPDEILCISLLKKHYER 233
                                            L+ EM+ +G +P      SL+    + 
Sbjct: 808 CEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKA 867

Query: 234 GNMDEAIELQNEMMGRGLLSGSKN 257
           G M++A EL +EM  RG+L  S  
Sbjct: 868 GMMNQAKELFSEMKRRGVLHTSST 891



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K++  ++  + +I+ GL        +   + +MK++G+  N V   TL+D +FK   
Sbjct: 425 MEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQG 484

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +ML   +E        L++GL K+G + EA   F  M + GL  +   Y  
Sbjct: 485 QEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYAT 544

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGL K   +  A  +  E+ +R++ PD   Y   I+   +   F EA +    M   G
Sbjct: 545 LMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTG 604

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y +++    R G+  +A  L +EM    I P+ I   +L+    E G +++A 
Sbjct: 605 LEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAK 664

Query: 241 ELQNEMMGRGL 251
            L NEM   G 
Sbjct: 665 YLLNEMASAGF 675



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 115/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  ++  YGT+I G       E +  +  +M   G+ AN  I  +L++   K G 
Sbjct: 460 MKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGN 519

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +L  +M +  + +  V +  L+DGL K+G +  A+     + +  L P+  VY  
Sbjct: 520 IEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNV 579

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+ LC+      A++   EM    + PD   Y  +I    +  +  +AL L N M    
Sbjct: 580 FINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSS 639

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +L  YT+LV GL   G +++A+ L +EM   G  P  +    +L+      +    +
Sbjct: 640 IKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVIL 699

Query: 241 ELQNEMMGRGL 251
           E+   MMG GL
Sbjct: 700 EVHELMMGAGL 710



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 124/287 (43%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   ++  +  + T+I   C   + E++  L   M  +G+  + V  + L+D   + G 
Sbjct: 250 MKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGR 309

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG---------- 110
            SEA +L  EM    +    VT+C  ID L K   V E++   G M   G          
Sbjct: 310 FSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTT 369

Query: 111 -------------------------LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                    + PN   YT L+D  C+   I+ A  +  +M ++ 
Sbjct: 370 VMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKS 429

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+   ++++++G +K     +A     +M + G+  ++  Y +L+ G  +C   + A 
Sbjct: 430 VSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAAL 489

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            ++ +M+  G+  +  +  SL+    + GN++EA  L  +M  RGLL
Sbjct: 490 DVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLL 536



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 110/251 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y T++ G       + +  +   MK +G+  + V  TTL+  Y K   
Sbjct: 215 MTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKR 274

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +L + M+ S +   VVT   L+DGLC+ G   EA   F  M   G+ PN   Y  
Sbjct: 275 IEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCT 334

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            ID L K   +  +  L  EM  R +  D   YT ++D   K    +EA ++        
Sbjct: 335 FIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDN 394

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT LV    R G++  A  +  +M  + + P+ +   S+L    +RG + +A 
Sbjct: 395 ITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAA 454

Query: 241 ELQNEMMGRGL 251
               +M   G+
Sbjct: 455 GYMRKMKDSGI 465



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 106/242 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  + AD+ +Y T++  LC       + ++L EM   G+  +T+    L+  + K+  
Sbjct: 705 MMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSH 764

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +   +ML   +   + TF  L+ GL  +G + EA      M   GL PN   Y  
Sbjct: 765 LDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDI 824

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G  KK+    A  L+ EM  +  IP  + Y +LI  + K     +A  L + M   G
Sbjct: 825 LVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRG 884

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V    + Y  L+ G S+  +  E R+L  +M   G  P +    S+ +   + G   EA 
Sbjct: 885 VLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEAR 944

Query: 241 EL 242
            L
Sbjct: 945 RL 946



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 2/249 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
            + AD   Y   + GL  +     +  +LSEM + G+  + V  +T +    + G   EA
Sbjct: 112 QVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEA 171

Query: 65  LSLLDEMLDSR-IE-VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            +L + ++  R I+ + VV +  LIDG CK   +  A+    RM   GL  +V  Y  L+
Sbjct: 172 AALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLV 231

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G       + A  + + M    + P    +T LI  Y K +  +EA  L   M   GV 
Sbjct: 232 AGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVL 291

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+   ++LV GL R G   EA  LF EM   G+ P+ +   + +    +   ++E++ L
Sbjct: 292 PDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGL 351

Query: 243 QNEMMGRGL 251
             EM+ RG+
Sbjct: 352 LGEMVSRGV 360



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 6/194 (3%)

Query: 64  ALSLLDEMLDSRIEVTV--VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH-PNVAVYTA 120
           ALSLL      + +V    V++ + + GL + G  R A      M   G+    V + TA
Sbjct: 99  ALSLLRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTA 158

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD--TTAYTALIDGYLKHESFKEALNLKNRMTE 178
           L+ GL +   +  A  L + + +   I       + ALIDGY K +    AL +  RMT 
Sbjct: 159 LV-GLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTT 217

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G+ LD+  Y +LV G    G    A  +   M   G+ P  +   +L+ ++ +   ++E
Sbjct: 218 QGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEE 277

Query: 239 AIELQNEMMGRGLL 252
           A  L   M+  G+L
Sbjct: 278 AFTLYEGMVRSGVL 291



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 75/179 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  + T++ GL    +  ++  ++ EMK+ GL  N +    L+  Y K   
Sbjct: 775 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSN 834

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L  EM+         T+  LI    K+G++ +A + F  M   G+    + Y  
Sbjct: 835 KVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDI 894

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L++G  K       R L  +M +    P     +++   + K     EA  L   + +V
Sbjct: 895 LLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFKV 953


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 124/252 (49%), Gaps = 5/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    K D+  + T+I GLC   + ++++ +L EM+ +G  AN V   TL++    AG 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD-FGLHPNVAVYT 119
             EA+ ++  M  +       T+  +I G CKSG +  A  +   M    G  P+   Y+
Sbjct: 140 SGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 120 ALIDGLCKKNCIERARNLFDEM-PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            LI+GLCK + + +A  L  EM  ++D      A+  L+DGY K +    A  L + M E
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G   D+  Y++++ GL RCG + +   L  +M+ RG  PD +    L+    + G M E
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 239 AIELQNEMMGRG 250
           A  L   M+  G
Sbjct: 317 ACRLVKRMLEDG 328



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 6/240 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAG 59
           M+G     D   Y  II G C   + + +   L EMK+  G + +T   + L++   K+ 
Sbjct: 147 MQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206

Query: 60  EPSEALSLLDEMLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
              +A  LL EM+  +    +VV F  L+DG CK+  +  A +    M + G  P+V  Y
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +IDGLC+   +++   L ++M  R   PD   YT L+ G  K     EA  L  RM E
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERG 234
            G   +   Y+ +  GL +   L  A  L   +  +G + D    E L +S+ K+  +R 
Sbjct: 327 DGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRLLDRA 386



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 5/201 (2%)

Query: 51  LMDAYFKAGEPSEALSLLDEM-LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           L+ A+  AGE   A+ LL EM     +  T   +   +  LCKSG V EA++    M D 
Sbjct: 24  LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
              P+V  +  LI GLCK   ++ A+ + DEM +     +   Y  LI+G        EA
Sbjct: 84  ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLLK 228
           + +   MT      D   Y +++ G  + G +  A     EM  R G  PD      L+ 
Sbjct: 144 VLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 229 KHYERGNMDEAIELQNEMMGR 249
              +  N+ +A EL  EM+GR
Sbjct: 201 GLCKSSNLRKADELLQEMIGR 221


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + DL  YG ++ GLC     + + +LL++M++  L    +I TT++D   K   
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKH 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  EM    I   VVT+  LI  LC  G   +A      M +  ++P+V  ++A
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+  +  A  L+DEM KR + P    Y++LI+G+  H+   EA  +   M    
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ +Y++L+ G  +   + E   LF EM  RG++ + +   +L++  ++ G+ D A 
Sbjct: 392 CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQ 451

Query: 241 ELQNEMMGRGL 251
           E+  EM+  G+
Sbjct: 452 EIFKEMVSDGV 462



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 125/243 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GL + +K  ++  L+  M   G   + V    +++   K G+   A  LL++M 
Sbjct: 189 FNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKME 248

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             ++E  V+ +  +IDGLCK+  + +A++ F  M   G+ PNV  Y++LI  LC      
Sbjct: 249 QGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  +M +R + PD   ++ALID ++K     EA  L + M +  +D  +  Y+SL+
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G      L EA+ +F  M+ +   PD +   +L+K   +   +DE +EL  EM  RGL+
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLV 428

Query: 253 SGS 255
             +
Sbjct: 429 GNT 431



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 126/240 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++  + +Y TII GLC     +D+  L  EM+  G+  N V  ++L+      G 
Sbjct: 247 MEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL +M++ +I   V TF  LID   K G + EA   +  M    + P++  Y++
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C  + ++ A+ +F+ M  +   PD  +Y+ LI G+ K +   E + L   M++ G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRG 426

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+L+ GL + G    A+ +F EM+  G+ P+ +   +LL    + G +++A+
Sbjct: 427 LVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 108/208 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ ++  Y ++I  LC   ++ D+  LLS+M E  +  +    + L+DA+ K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEM+   I+ ++VT+  LI+G C    + EA   F  M      P+V  Y+ 
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYST 401

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++    LF EM +R ++ +T  YT LI G  +      A  +   M   G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  ++  Y +L+ GL + G L++A V+F
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVF 489



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I   +  Y ++I G C+  + +++K +   M       + V  +TL+  + KA  
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L  EM    +    VT+  LI GL ++G    A + F  M   G+ PN+  Y  
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +E+A  +F+ + +  M P    Y  +I+G  K    ++  +L   ++  G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+ AY +++ G  R G  +EA  LF EM   G LP+     +L++     G+ + + 
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591

Query: 241 ELQNEMMGRGL 251
           EL  EM   G 
Sbjct: 592 ELIKEMRSCGF 602



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 120/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C  S+   +  +L +M + G   N V  ++L++ Y  +   SEA++L+D+M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  +   VTF  LI GL       EA+    RM   G  P++  Y  +++GLCK+   +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L ++M +  + P    YT +IDG  K++   +ALNL   M   G+  ++  Y+SL+
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L   G   +A  L  +MI R I PD     +L+    + G + EA +L +EM+ R +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 115/240 (47%), Gaps = 1/240 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   D+  Y T+I G C   + ++   L  EM + GL  NTV  TTL+   F+AG+
Sbjct: 387 MVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGD 446

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  EM+   +   ++T+  L+DGLCK+G + +A+  F  +    + P +  Y  
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   +E   +LF  +  + + PD  AY  +I G+ +  S +EA  L   M E G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y +L+    R G  + +  L  EM   G   D    I L+      G +D++ 
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS-TIGLVTNMLHDGRLDKSF 625



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 112/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  +   +KF+    L  +M+  G+  N    + L++ + +  +   AL++L +M+
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E  +VT   L++G C S  + EA+    +M   G  PN   +  LI GL   N   
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L D M  +   PD   Y  +++G  K      A  L N+M +  ++  +  YT+++
Sbjct: 204 EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTII 263

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +  H+ +A  LF EM  +GI P+ +   SL+      G   +A  L ++M+ R +
Sbjct: 264 DGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 108/229 (47%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E K +D+  L  EM ++    + +  + L+ A  K  +    +SL ++M +  +     T
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYT 118

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           + +LI+  C+   +  A+   G+M   G  PN+   ++L++G C    I  A  L D+M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
                P+T  +  LI G   H    EA+ L +RM   G   DL  Y  +V GL + G   
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            A +L ++M    + P  ++  +++    +  +MD+A+ L  EM  +G+
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGI 287


>gi|341605737|gb|AEK82971.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605739|gb|AEK82972.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605741|gb|AEK82973.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 183



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|341606829|gb|AEK83517.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 208

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 5   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 65  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSS 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRMEEEE 184

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 185 GCDQTVYTYTILISGMFK 202



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 87/180 (48%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++  
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSM 120

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +BEA+ L   M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRM 180



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 1   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 61  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSM 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRM 180



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 2   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 62  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMF 121

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 122 YSSLIDGLGKAGRIDEAERLFEEMSEKG 149


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 127/263 (48%), Gaps = 16/263 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     D   Y  +I  LC  S+ E++  L  EMK  G+  +    T L+D + KAG 
Sbjct: 480 MMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGI 539

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A + LDEM+    E TVVT+  LI    K+  V  A + F  M   G  PNV  YTA
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599

Query: 121 LIDGLCKKNCIERARNLFDEM------PKRDMI----------PDTTAYTALIDGYLKHE 164
           LIDG CK   IE+A  ++  M      P  DM           P+   Y AL+DG  K  
Sbjct: 600 LIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH 659

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             K+A +L   M   G + +   Y +L+ G  +   L EA+ +FH+M+ RG  P+     
Sbjct: 660 KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYS 719

Query: 225 SLLKKHYERGNMDEAIELQNEMM 247
           SL+ + ++   +D  +++ ++M+
Sbjct: 720 SLIDRLFKDKRLDLVLKVLSKML 742



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 16/254 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM- 71
           Y T+I       K   +  L   M   G   N +  T L+D Y K+G   +A  +   M 
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621

Query: 72  -------LDSRIEV--------TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
                  +D   ++         VVT+  L+DGLCK+  V++A D    M   G  PN  
Sbjct: 622 GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTI 681

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           VY ALIDG CK   ++ A+ +F +M +R   P+   Y++LID   K +     L + ++M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E     ++  YT ++ GLS+     EA  L   M  +G  P+ +   +++    + G +
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 237 DEAIELQNEMMGRG 250
           D+ +EL  EM  +G
Sbjct: 802 DKCLELFREMGSKG 815



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 16/247 (6%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           LC   KFE +  ++ EM  NG   +T   + ++     A     A  L  EM  + +   
Sbjct: 464 LCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPD 523

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V T+ +LID   K+G++++A ++   M   G  P V  YT LI    K   +  A  LF+
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM----------------TEVGVDL 183
            M  +   P+   YTALIDGY K  + ++A  +  RM                  V    
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKP 643

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y +LV GL +   +++AR L   M   G  P+ I+  +L+    +   +DEA E+ 
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 244 NEMMGRG 250
           ++M+ RG
Sbjct: 704 HKMVERG 710



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 98/205 (47%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  YG ++ GLC   K +D++ LL  M  +G   NT++   L+D + KA +  EA  
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +  +M++      V T+  LID L K   +   +    +M +    PN+ +YT +IDGL 
Sbjct: 702 VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K    + A  L   M ++   P+   YTA+IDG+ K     + L L   M   G   +  
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEM 211
            YT L+      GHL EA  L  EM
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEM 846



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 98/203 (48%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           N V    L+D   KA +  +A  LL+ M     E   + +  LIDG CK+  + EA + F
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            +M + G +PNV  Y++LID L K   ++    +  +M +    P+   YT +IDG  K 
Sbjct: 704 HKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               EA  L   M E G   ++  YT+++ G  + G + +   LF EM  +G  P+ +  
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 823

Query: 224 ISLLKKHYERGNMDEAIELQNEM 246
             L+      G++DEA  L  EM
Sbjct: 824 TVLINHCCATGHLDEAYALLEEM 846



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 3/247 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C  +K ++++ +  +M E G   N    ++L+D  FK       L +L +M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L++     +V +  +IDGL K     EA      M + G  PNV  YTA+IDG  K   +
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           ++   LF EM  +   P+   YT LI+         EA  L   M +      +++Y  +
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G  R   L     L  E+   G  P  +L   L+    + G ++ A+EL  E++   +
Sbjct: 862 IEGYKREFILSLG--LLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASM 919

Query: 252 -LSGSKN 257
            ++  KN
Sbjct: 920 SMTAKKN 926



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 4/240 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y  +I GL   +K +++  L+  M+E G   N V  T ++D + KAG+  + L L 
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELF 808

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM         VT+ VLI+  C +G + EA      M       +V+ Y  +I+G  ++
Sbjct: 809 REMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE 868

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL--N 186
             +  +  L +E+ K    P    Y  LID ++K    + AL L   +    + +    N
Sbjct: 869 FIL--SLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKN 926

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YTSL++  S    +  A  LF++MI  G++PD    + LL         +EA++L + +
Sbjct: 927 LYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 6/243 (2%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL---- 67
           ++ +++   C    F  +  LL +M++       V+   L+ +    GE    ++     
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439

Query: 68  --LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              +EML +   +  V        LC  G   +A      M   G  P+ + Y+ +I  L
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  + +E A  LF EM    ++PD   YT LID + K    K+A N  + M   G +  +
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+    +   +  A  LF  MI +G  P+ I   +L+  + + GN+++A ++   
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619

Query: 246 MMG 248
           M G
Sbjct: 620 MRG 622



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 9/246 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++       K + ++L+  EM E GL+ +         A  K G+  EALSL+++  
Sbjct: 244 YNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK-- 301

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   + +  +I GLC++    EA+D+  RM      PNV  Y  L+ G   K  + 
Sbjct: 302 -EDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLG 360

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           R + +   M      P  T + +L+  Y K + F  A  L  +M +         Y  L+
Sbjct: 361 RCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILI 420

Query: 193 WGLSRCGHL------QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             +   G L      + A   ++EM+  G + +++  +S  +     G  ++A ++ +EM
Sbjct: 421 GSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM 480

Query: 247 MGRGLL 252
           MG G +
Sbjct: 481 MGNGFV 486



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 87/194 (44%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           FE ++   +EM   G   N V   +        G+  +A  ++ EM+ +       T+  
Sbjct: 435 FELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSE 494

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I  LC +  V  A   F  M   G+ P+V  YT LID   K   I++A N  DEM +  
Sbjct: 495 VIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDG 554

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P    YT LI  YLK +    A  L   M   G   ++  YT+L+ G  + G++++A 
Sbjct: 555 CEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKAC 614

Query: 206 VLFHEMIGRGILPD 219
            ++  M G   +PD
Sbjct: 615 QIYARMRGDADIPD 628



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 92/249 (36%), Gaps = 32/249 (12%)

Query: 30  KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG 89
           K  L   ++ G      +   L+D + +          L E+     EV      VLI  
Sbjct: 156 KFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRK 215

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP------- 142
            C++GL   A++  GR+ DFG  P    Y AL+    + + ++ A+ +  EM        
Sbjct: 216 CCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMD 275

Query: 143 -------------------------KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
                                    K D +P+T  Y  +I G  +   F+EA++  NRM 
Sbjct: 276 EFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMR 335

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
                 ++  Y  L+ G      L   + +   MI  G  P   +  SL+  + +  +  
Sbjct: 336 STSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFS 395

Query: 238 EAIELQNEM 246
            A +L  +M
Sbjct: 396 YAYKLLKKM 404



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 84/209 (40%), Gaps = 10/209 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K ++  Y  +I G     K +    L  EM   G   N V  T L++     G 
Sbjct: 776 MEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGH 835

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF---GLHPNVAV 117
             EA +LL+EM  +     V ++C +I+     G  RE I   G + +    G  P + +
Sbjct: 836 LDEAYALLEEMKQTYWPKHVSSYCKVIE-----GYKREFILSLGLLEEVEKNGSAPTILL 890

Query: 118 YTALIDGLCKKNCIERARNLFDEM--PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
           Y  LID   K   +E A  L  E+      M      YT+LI  +        A  L   
Sbjct: 891 YKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYD 950

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           M   GV  DL  +  L+ GL R    +EA
Sbjct: 951 MIRDGVIPDLGTFVHLLMGLIRVRRWEEA 979


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 122/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++  Y  +I G C E     +  LLS M E+GL  +    +  +D   K G 
Sbjct: 440 MLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGL 499

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SL + + +  I+   V +  LIDG CK G V +      +M   G  PN   Y +
Sbjct: 500 VEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNS 559

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+   + AR L D M KRD+ P    YT LID  LK + F +A ++ ++M   G
Sbjct: 560 LIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTG 619

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YT+ +      G L++A VL  +M  +GI+PD +L    +  +   G++D A 
Sbjct: 620 SHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAF 679

Query: 241 ELQNEMMGRG 250
            +   M   G
Sbjct: 680 GILKRMHEVG 689



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 120/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N   +   Y  +I G C       +  LL +M E  L  N V    L+    K G+
Sbjct: 405 MESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGD 464

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL  M +S +     T+ V ID LCK GLV EA   F  + + G+  N  +Y+ 
Sbjct: 465 LGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYST 524

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +   R L D+M     +P++  Y +LIDGY K ++FKEA  L + M +  
Sbjct: 525 LIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRD 584

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++   + YT L+  L +     +A  +F +M+  G  PD  +  + +  +   G + +A 
Sbjct: 585 IEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAE 644

Query: 241 ELQNEMMGRGLL 252
            L  +M  +G++
Sbjct: 645 VLICKMNAKGIM 656



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+ + ++  Y  +I  LC +S F+D+K +L+ M E GL  + V    L+D Y K G 
Sbjct: 335 MTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGL 394

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + AL +L  M  +       T+  LI G C+   + +A+    +M +  L PNV  Y  
Sbjct: 395 SASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNI 454

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+  +  A  L   M +  ++PD   Y+  ID   K    +EA +L   + E G
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG 514

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y++L+ G  + G + + R L  +M+  G +P+ I   SL+  + +  N  EA 
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574

Query: 241 ELQNEMMGRGL 251
            L + M+ R +
Sbjct: 575 LLVDIMIKRDI 585



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 98/196 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K IKA+  +Y T+I G C   K  D + LL +M   G   N++   +L+D Y K   
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+D M+   IE    T+ +LID L K     +A D F +M   G HP+V +YTA
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTA 629

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I   C    ++ A  L  +M  + ++PDT  YT  ID Y +  S   A  +  RM EVG
Sbjct: 630 FIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689

Query: 181 VDLDLNAYTSLVWGLS 196
            +     Y+ L+  LS
Sbjct: 690 CEPSYYTYSCLIKHLS 705



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 4/254 (1%)

Query: 3   GKNIKADLPL----YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
            K ++A L L    Y ++I G C     + +  +   M   G   N V  T L+  + +A
Sbjct: 228 SKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEA 287

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
               EAL L  +M +     TV T+ V+I  LC+ G   EA++ F  M +    PNV  Y
Sbjct: 288 RRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTY 347

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           T LI  LC+ +  + A+ + + M ++ +IP    Y ALIDGY K      AL + + M  
Sbjct: 348 TVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMES 407

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
                +   Y  L+ G  R  ++ +A  L H+M+ R + P+ +    L+    + G++  
Sbjct: 408 NNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGS 467

Query: 239 AIELQNEMMGRGLL 252
           A +L + M   GL+
Sbjct: 468 AYKLLSLMNESGLV 481



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 101/227 (44%), Gaps = 1/227 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y   I  LC     E+++ L   +KE G+ AN VI +TL+D Y K G+ S+   LLD+ML
Sbjct: 487 YSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKML 546

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +      +T+  LIDG CK    +EA      M    + P    YT LID L K +  +
Sbjct: 547 SAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFD 606

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A ++FD+M      PD   YTA I  Y  H   K+A  L  +M   G+  D   YT  +
Sbjct: 607 QAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFI 666

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
               R G +  A  +   M   G  P      S L KH       E 
Sbjct: 667 DAYGRFGSIDGAFGILKRMHEVGCEP-SYYTYSCLIKHLSNAKPKEV 712



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 118/255 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N    +  Y  II+ LC   +  ++  +  EM E     N    T L+ +  +   
Sbjct: 300 MHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSN 359

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +L+ ML+  +  +VVT+  LIDG CK GL   A++    M      PN   Y  
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNE 419

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   I +A +L  +M +R + P+   Y  LI G  K      A  L + M E G
Sbjct: 420 LILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESG 479

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y+  +  L + G ++EAR LF  +  +GI  +E++  +L+  + + G + +  
Sbjct: 480 LVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGR 539

Query: 241 ELQNEMMGRGLLSGS 255
            L ++M+  G +  S
Sbjct: 540 FLLDKMLSAGCVPNS 554



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 113/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C   + +++  L S+M E+         T ++ A  + G  +EAL++  EM 
Sbjct: 277 YTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMT 336

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +  V T+ VLI  LC+     +A      M + GL P+V  Y ALIDG CKK    
Sbjct: 337 EKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSA 396

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +   M   +  P+   Y  LI G+ + ++  +A++L ++M E  +  ++  Y  L+
Sbjct: 397 SALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILI 456

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G L  A  L   M   G++PDE      +    +RG ++EA  L   +  +G+
Sbjct: 457 HGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 94/190 (49%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           E  S+  EMLD  +   + T   +++G CK G V EA  Y  ++   GL  +   YT+LI
Sbjct: 187 EMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLI 246

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C+   ++ A  +F  MP +  + +  +YT LI G+ +     EAL L ++M E    
Sbjct: 247 LGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCW 306

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             +  YT +++ L + G   EA  +F EM  +   P+      L+    E  N D+A ++
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKI 366

Query: 243 QNEMMGRGLL 252
            N M+ +GL+
Sbjct: 367 LNGMLEKGLI 376



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 108/220 (49%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           ++ K +  EM ++ +T N     T+++ Y K G   EA   + +++ + + +   T+  L
Sbjct: 186 DEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSL 245

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I G C++  V  A   F  MP+ G   N   YT LI G C+   ++ A  LF +M + + 
Sbjct: 246 ILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNC 305

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P    YT +I    +     EALN+   MTE     +++ YT L+  L    +  +A+ 
Sbjct: 306 WPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKK 365

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           + + M+ +G++P  +   +L+  + ++G    A+E+ + M
Sbjct: 366 ILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 116/271 (42%), Gaps = 29/271 (10%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +Y   I   C   + +D+++L+ +M   G+  +T++ T  +DAY + G    A  +L
Sbjct: 623 DVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGIL 682

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKS----------------GLVRE-------------A 99
             M +   E +  T+  LI  L  +                G+                 
Sbjct: 683 KRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFT 742

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +D FG+M + G  PN   Y   I GLCK  C+E A  LFD M ++   P+   Y +L+  
Sbjct: 743 LDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGC 802

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             +   + EA+   + M E      L++   L+ GL   G+ ++A+ +F   +      D
Sbjct: 803 SCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYD 862

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           E++   L+    ++G  D+  +L   M  +G
Sbjct: 863 EMVWKVLIDGLLKKGLSDKCSDLFGIMETQG 893



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 70/142 (49%)

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
           R+  F     +  Y  L+  L +   I+  ++++ EM    + P+      +++GY K  
Sbjct: 159 RVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLG 218

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
           +  EA    +++ + G+ LD   YTSL+ G  R  ++  A  +F  M  +G L +E+   
Sbjct: 219 NVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYT 278

Query: 225 SLLKKHYERGNMDEAIELQNEM 246
           +L+    E   +DEA++L ++M
Sbjct: 279 NLIHGFCEARRVDEALKLFSQM 300



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 67/148 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG  I GLC     E +  L   MKE G + N  I  +L+    + G   EA+  LD M+
Sbjct: 761 YGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMI 820

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++R    + +  +L+ GL   G   +A   F        + +  V+  LIDGL KK   +
Sbjct: 821 ENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSD 880

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGY 160
           +  +LF  M  +        Y+ LI+G+
Sbjct: 881 KCSDLFGIMETQGCQIHPKTYSMLIEGF 908


>gi|341605773|gb|AEK82989.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 87/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L + G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMTLFKRM 183



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   +   
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 127/252 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      ++  Y  +I GLC + K  ++  +  ++    L  + V   TL+    K  E
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQE 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L ++DEML  R   +      L++GL K G V EA++   R+ +FG+ PN+ VY A
Sbjct: 313 FEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNA 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK    + A  LFD M K  + P+   Y+ LID + +      AL+    M ++G
Sbjct: 373 LIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMG 432

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y SL+ G  + G +  A  L  EMI + + P  +   SL+  +  +G +++A+
Sbjct: 433 LKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492

Query: 241 ELQNEMMGRGLL 252
            L +EM G+G++
Sbjct: 493 RLYHEMTGKGIV 504



 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 125/238 (52%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +++ GL    K E++  L+  + E G++ N  +   L+D+  K     EA  L D M   
Sbjct: 337 SLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKI 396

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +    VT+ +LID  C+ G +  A+ + G M D GL P+V  Y +LI+G CK   I  A
Sbjct: 397 GLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAA 456

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            +L  EM  + + P    YT+L+ GY       +AL L + MT  G+   +  +T+L+ G
Sbjct: 457 ESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSG 516

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           L R G +++A  LF EM    + P+ +    +++ + E GNM +A E  NEM+ +G++
Sbjct: 517 LFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIV 574



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 122/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           + GK +K D+  Y T++ GLC   +FE    ++ EM     + +    ++L++   K G+
Sbjct: 288 LAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGK 347

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL+L+  + +  +   +  +  LID LCK     EA   F RM   GL PN   Y+ 
Sbjct: 348 VEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSI 407

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  C++  ++ A +   EM    + P    Y +LI+G+ K      A +L   M    
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++  +  YTSL+ G    G + +A  L+HEM G+GI+P      +LL   +  G + +A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 241 ELQNEM 246
           +L  EM
Sbjct: 528 KLFTEM 533



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 110/214 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  ++ +Y  +I  LC    F++++LL   M + GL  N V  + L+D + + G+   AL
Sbjct: 363 VSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTAL 422

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S L EM+D  ++ +V  +  LI+G CK G +  A      M +  L P V  YT+L+ G 
Sbjct: 423 SFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGY 482

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C K  I +A  L+ EM  + ++P    +T L+ G  +    ++A+ L   M E  V  + 
Sbjct: 483 CSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNR 542

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             Y  ++ G    G++ +A    +EMI +GI+PD
Sbjct: 543 VTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPD 576



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C   K + +   L EM + GL  +     +L++ + K G+ S A SL+ EM+
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMI 464

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + ++E TVVT+  L+ G C  G + +A+  +  M   G+ P++  +T L+ GL +   I 
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIR 524

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM + ++ P+   Y  +I+GY +  +  +A    N M E G+  D  +Y  L+
Sbjct: 525 DAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLI 584

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL   G   EA+V    +       +EI    LL      G ++EA+ +  +M  RG+
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV 643



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 35/280 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K  +  Y ++I G C       ++ L++EM    L    V  T+LM  Y   G+ ++AL
Sbjct: 433 LKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM    I  ++ TF  L+ GL ++GL+R+A+  F  M ++ + PN   Y  +I+G 
Sbjct: 493 RLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGY 552

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTA--------------------------------- 152
           C++  + +A    +EM ++ ++PDT +                                 
Sbjct: 553 CEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612

Query: 153 --YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             YT L+ G+ +    +EAL++   M   GVDLDL  Y  L+ G  +    +    L  E
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKE 672

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           M  RG+ PD+++  S++    + G+  EA  + + M+  G
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 129/252 (51%), Gaps = 8/252 (3%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKL---LLSEMKENGLTANTVICTTLMDAYFKAGE 60
           + +  DL  YG +I G     K +D K+   LL EM + GL  + VI T+++DA  K G+
Sbjct: 641 RGVDLDLVCYGVLIDG---SLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGD 697

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + D M++       VT+  +I+GLCK+G V EA     +M      PN   Y  
Sbjct: 698 FKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGC 757

Query: 121 LIDGLCKK-NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +D L K    +++A  L + + K  ++ +T  Y  LI G+ +    +EA  L  RM   
Sbjct: 758 FLDILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGD 816

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV  D   YT+++  L R   +++A  L++ M  +GI PD +   +L+      G M +A
Sbjct: 817 GVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876

Query: 240 IELQNEMMGRGL 251
            EL+NEM+ +GL
Sbjct: 877 TELRNEMLRQGL 888



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 109/220 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M   G+  +  I T ++ +  +  + S A  ++ +M  +  +V +V + VLIDGLC
Sbjct: 214 LFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLC 273

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K   V EA+     +    L P+V  Y  L+ GLCK    E    + DEM +    P   
Sbjct: 274 KKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEA 333

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           A ++L++G  K    +EALNL  R+ E GV  ++  Y +L+  L +  +  EA +LF  M
Sbjct: 334 AVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRM 393

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              G+ P+++    L+     RG +D A+    EM+  GL
Sbjct: 394 GKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGL 433



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 120/246 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I   +  + T++ GL       D+  L +EM E  +  N V    +++ Y + G 
Sbjct: 498 MTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGN 557

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A   L+EM++  I     ++  LI GLC +G   EA  +   +       N   YT 
Sbjct: 558 MSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C++  +E A ++  +M  R +  D   Y  LIDG LKH+  K  L L   M + G
Sbjct: 618 LLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRG 677

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YTS++   S+ G  +EA  ++  MI  G +P+E+   +++    + G ++EA 
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737

Query: 241 ELQNEM 246
            L ++M
Sbjct: 738 ILCSKM 743



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 6/254 (2%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+K +   Y  +I G C E     +   L+EM E G+  +T     L+      G+ SEA
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
              +D +     E+  + +  L+ G C+ G + EA+     M   G+  ++  Y  LIDG
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDG 656

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K    +    L  EM  R + PD   YT++ID   K   FKEA  + + M   G   +
Sbjct: 657 SLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL--C-ISLLKKHYERGNMDEAIE 241
              YT+++ GL + G + EA +L  +M     +P+++   C + +L K    G+M +A+E
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGV--GDMKKAVE 774

Query: 242 LQNEMMGRGLLSGS 255
           L N ++ +GLL+ +
Sbjct: 775 LHNAIL-KGLLANT 787



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 77/163 (47%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V T   L+ GL K      A++ F  M + G+ P+V +YT +I  LC+   + RA+ +  
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIV 251

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           +M       +   Y  LIDG  K +   EA+ +K  +    +  D+  Y +LV GL +  
Sbjct: 252 QMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQ 311

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             +    +  EM+     P E    SL++   +RG ++EA+ L
Sbjct: 312 EFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNL 354



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 56/111 (50%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           GL ANT     L+  + + G   EA  L+  M+   +    +T+  +I  LC+   V++A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA 841

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           I+ +  M + G+ P+   Y  LI G C    + +A  L +EM ++ + P+T
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNT 892



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 1/189 (0%)

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVY 118
           +PSE    L    +     +  +F +LI    +S  V + +  F  M     L P V   
Sbjct: 136 KPSEVFDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTL 195

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           +AL+ GL K      A  LFD+M    + PD   YT +I    + +    A  +  +M  
Sbjct: 196 SALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEA 255

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G D+++  Y  L+ GL +   + EA  +  ++ G+ + PD +   +L+    +    + 
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEV 315

Query: 239 AIELQNEMM 247
            +E+ +EM+
Sbjct: 316 GLEMIDEML 324



 Score = 38.5 bits (88), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 19/173 (10%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           +  +FC+LI  L ++ L   A      +    L P+  V+ AL    C + C   + + F
Sbjct: 103 STASFCILIHALVQANLFWPASSLLQTLLLRALKPS-EVFDALFS--CYEKCKLSSSSSF 159

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEA-LNLKNRMTEVGVDLDLNAYTSLVWGLSR 197
           D                LI  Y++     +  L  K  MT+V +  ++   ++L+ GL +
Sbjct: 160 D---------------LLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVK 204

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             H   A  LF +MI  GI PD  +   +++   E  ++  A E+  +M   G
Sbjct: 205 FRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATG 257


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 126/243 (51%), Gaps = 35/243 (14%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           L +Y  +I  LC + KF++++LL  EM E GL AN V  + L+D++ + G+   A+  L 
Sbjct: 366 LFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLG 425

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           +M+ + I++TV  +  LI+G CK G +  A+ +F  M D GL P V  YT+LI G C K 
Sbjct: 426 KMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKG 485

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +  A  L+ EM  + + P+T  +T LI           AL   NRMT            
Sbjct: 486 KLHEAFRLYHEMTGKGIAPNTYTFTTLI----------SALFRANRMT------------ 523

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
                        +A  LF EM+ + ++P+E+    +++ H + GN  +A EL N+M+ +
Sbjct: 524 -------------DAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQK 570

Query: 250 GLL 252
           GL+
Sbjct: 571 GLV 573



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 123/243 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y  +I GLC   +  ++  + + + + GLTA+ V   TL+    K  E      ++
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVM 319

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM++     T      L++GL + G V +A D   R+   G  P++ VY ALI+ LCK 
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + A  LF EM ++ +  +   Y+ LID + +      A++   +M   G+ + +  Y
Sbjct: 380 GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPY 439

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SL+ G  + G+L  A   F EMI +G+ P  +   SL+  +  +G + EA  L +EM G
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499

Query: 249 RGL 251
           +G+
Sbjct: 500 KGI 502



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 123/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K  +  Y ++I G C + K  ++  L  EM   G+  NT   TTL+ A F+A  
Sbjct: 462 MIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANR 521

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L DEML+  +    VT+ V+I+G CK G   +A +   +M   GL P+   Y  
Sbjct: 522 MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRP 581

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC    +  A+   D++ +     +   Y+AL+ GY K    ++AL +   M + G
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           VD+DL  Y  L+ G  +         L   M  + + PD+++  S++  + + G++ +A 
Sbjct: 642 VDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAF 701

Query: 241 ELQNEMMGRG 250
            + + M+  G
Sbjct: 702 GIWDIMIDEG 711



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 125/255 (49%), Gaps = 1/255 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  +   Y  +I G C E     +  LL++M + GL  +T     L+ +    G 
Sbjct: 532 MLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGR 591

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   +D++     ++  + +  L+ G CK G +R+A+     M   G+  ++  Y  
Sbjct: 592 VCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAV 651

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K+        L   M  + + PD   YT++IDGY K  S K+A  + + M + G
Sbjct: 652 LIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEG 711

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YT+L+  L + G + +A +L+ EM+     P+ +     L      G+M++A+
Sbjct: 712 CTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAV 771

Query: 241 ELQNEMMGRGLLSGS 255
           +L N+M+ +GLL+ +
Sbjct: 772 QLHNDML-KGLLANT 785



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 121/249 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K + A    Y T++ GLC   +FE    ++ EM E G        ++L++   + G+  +
Sbjct: 290 KGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVD 349

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L++ +       ++  +  LI+ LCK G   EA   F  M + GL  N   Y+ LID
Sbjct: 350 AFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILID 409

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             C++  ++ A +   +M    +      Y +LI+G+ K  +   A++  + M + G+  
Sbjct: 410 SFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKP 469

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            + +YTSL+ G    G L EA  L+HEM G+GI P+     +L+   +    M +A  L 
Sbjct: 470 TVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLF 529

Query: 244 NEMMGRGLL 252
           +EM+ + ++
Sbjct: 530 DEMLEQNMM 538



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL  Y  +I G   E        LL  M +  L  + VI T+++D Y KAG 
Sbjct: 637 MVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGS 696

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + D M+D      +VT+  LI+ LCK+GL+ +A   +  M      PN   Y  
Sbjct: 697 VKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCC 756

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +D L ++  +E+A  L ++M K  ++ +T +Y  L+ G+ K    +EA  L + M +  
Sbjct: 757 FLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNA 815

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y+++++   R G+L  A   +  M+ +G+ PD +    L+      G + +A 
Sbjct: 816 IFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAF 875

Query: 241 ELQNEMMGRGL 251
           EL+++M+ RG+
Sbjct: 876 ELRDDMIRRGV 886



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 116/238 (48%), Gaps = 2/238 (0%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G ++ GL    + +   +L  E+   G+  +  I   ++ ++ +    ++A  ++  M  
Sbjct: 197 GEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMES 256

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
           S  ++ VV + VLI GLCK+  V EA++    +   GL  +   Y  L+ GLCK    E 
Sbjct: 257 S--DLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEV 314

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
              + DEM +   +P   A ++L++G  +     +A +L NR+ +VG    L  Y +L+ 
Sbjct: 315 GAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALIN 374

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L + G   EA +LF EM  +G+  +++    L+     RG +D AI    +M+  G+
Sbjct: 375 SLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGI 432



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 1/185 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I  LC     + ++LL  EM  +  T N V     +D   + G   +A+ L ++ML
Sbjct: 719 YTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML 778

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  TV ++ +L+ G CK G V EA      M D  + P+   Y+ +I   C++  ++
Sbjct: 779 KGLLANTV-SYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLD 837

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   +D M  + + PDT AY  LI G        +A  L++ M   GV  +   + SL 
Sbjct: 838 GAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLS 897

Query: 193 WGLSR 197
            G SR
Sbjct: 898 HGASR 902



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 2/202 (0%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+ +Y +     +++ +   M    +   V T   +++GL K   V   +  FG +   G
Sbjct: 164 LIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMG 223

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P++ +Y A+I   C+     +A+ +   M   D+  +   Y  LI G  K++   EA+
Sbjct: 224 IRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAV 281

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            +KN + + G+      Y +LV GL +    +    +  EMI  G +P E    SL++  
Sbjct: 282 EIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGL 341

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
             +G + +A +L N +   G +
Sbjct: 342 RRKGKVVDAFDLVNRVKKVGAM 363



 Score = 51.6 bits (122), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 9/190 (4%)

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +P E    L +  +    ++ + F +LI    +   + +++  F  M    L P V    
Sbjct: 138 DPREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLG 197

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +++GL K   ++    LF E+    + PD   Y A+I  + + ++F +A  +  RM   
Sbjct: 198 EVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRME-- 255

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI----LCISLLK-KHYERG 234
             DL++  Y  L+ GL +   + EA  + + +I +G+   E+    L + L K + +E G
Sbjct: 256 SSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVG 315

Query: 235 N--MDEAIEL 242
              MDE IEL
Sbjct: 316 AGVMDEMIEL 325



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 61/128 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K + A+   Y  ++ G C   + E++  LL EM +N +  + +  +T++    + G    
Sbjct: 779 KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDG 838

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+   D ML+  ++   + +  LI G C +G + +A +    M   G+ PN A + +L  
Sbjct: 839 AIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSH 898

Query: 124 GLCKKNCI 131
           G  +K  I
Sbjct: 899 GASRKFSI 906


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 1/239 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KGK I+AD+ +Y TII  LC      D+  L +EM   G+  N V   +L+      G  
Sbjct: 248 KGK-IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S+A  LL +M++ +I   VVTF  LID   K G + EA   +  M    + P++  Y++L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+G C  + ++ A+++F+ M  +D  P+   Y  LI G+ K +  +E + L   M++ G+
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +   Y +L+ GL + G    A+ +F +M+  G+ PD I    LL    + G +++A+
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485



 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 133/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + DL  YGT++ GLC     + +  LL +M++  + A+ VI TT++DA      
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++AL+L  EM +  I   VVT+  LI  LC  G   +A      M +  ++PNV  ++A
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+  +  A  L+DEM KR + PD   Y++LI+G+  H+   EA ++   M    
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y +L+ G  +   ++E   LF EM  RG++ + +   +L++  ++ G+ D A 
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450

Query: 241 ELQNEMMGRGL 251
           ++  +M+  G+
Sbjct: 451 KIFKKMVSDGV 461



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 124/243 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GL + +K  ++  L+  M   G   +     T+++   K G+   ALSLL +M 
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             +IE  VV +  +ID LC    V +A++ F  M + G+ PNV  Y +LI  LC      
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  +M +R + P+   ++ALID ++K     EA  L + M +  +D D+  Y+SL+
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G      L EA+ +F  MI +   P+ +   +L+K   +   ++E +EL  EM  RGL+
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427

Query: 253 SGS 255
             +
Sbjct: 428 GNT 430



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 109/219 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ ++  Y ++I  LC   ++ D+  LLS+M E  +  N V  + L+DA+ K G+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEM+   I+  + T+  LI+G C    + EA   F  M      PNV  Y  
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E    LF EM +R ++ +T  Y  LI G  +      A  +  +M   G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  D+  Y+ L+ GL + G L++A V+F  +    + PD
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  DL  Y  +I   C  S+   +  +L +M + G   + V  ++L++ Y     
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA++L+D+M     +   VTF  LI GL       EA+    RM   G  P++  Y  
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK+  I+ A +L  +M K  +  D   YT +ID    +++  +ALNL   M   G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y SL+  L   G   +A  L  +MI R I P+ +   +L+    + G + EA 
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345

Query: 241 ELQNEMMGRGL 251
           +L +EM+ R +
Sbjct: 346 KLYDEMIKRSI 356



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 122/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  D+  Y ++I G C+  + +++K +   M       N V   TL+  + KA  
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L  EM    +    VT+  LI GL ++G    A   F +M   G+ P++  Y+ 
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +E+A  +F+ + K  M PD   Y  +I+G  K    ++  +L   ++  G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YT+++ G  R G  +EA  LF EM   G LP+     +L++     G+   + 
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590

Query: 241 ELQNEMMGRGLL 252
           EL  EM   G +
Sbjct: 591 ELIKEMRSCGFV 602



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 106/219 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   ++  Y T+I G C   + E+   L  EM + GL  NTV   TL+   F+AG+
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+   +   ++T+ +L+DGLCK G + +A+  F  +    + P++  Y  
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   +E   +LF  +  + + P+   YT +I G+ +    +EA  L   M E G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              +   Y +L+    R G    +  L  EM   G + D
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +D+  L  EM ++    + V    L+ A  K  +    +SL + M + RI   + ++ 
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI+  C+   +  A+   G+M   G  P++   ++L++G C    I  A  L D+M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           +  P+T  +  LI G   H    EA+ L +RM   G   DL  Y ++V GL + G +  A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L  +M    I  D ++  +++       N+++A+ L  EM  +G+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286


>gi|399107188|gb|AFP20358.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 70  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +BEA+ L  
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSM 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVBEAMTLFKRM 185



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 67  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I   L  Y  II GL    + E ++L  +EM+  GL  + +   ++++ Y KAG 
Sbjct: 340 MENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGN 399

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL ++  + +  TV+T+  LIDG C+ G + EA      M + G  P+V  YT 
Sbjct: 400 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTI 459

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G  K   +  AR  FDEM  + + PD  AY   I   L      +A  L+  M   G
Sbjct: 460 LMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKG 519

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  ++ GL + G+L++A+ L  +M+  G+ PD I    L+  H ERG + EA 
Sbjct: 520 IYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEAR 579

Query: 241 ELQNEMMGRGL 251
           +L N M+  GL
Sbjct: 580 KLLNGMVSDGL 590



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 1/201 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  D   Y  II GLC     +D+K L  +M  +GL  + +  T L+ A+ + G  SE
Sbjct: 518 KGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSE 577

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+ M+   ++ +VVT+ +LI   C+ G +  A  +F +M D G+ PN   Y  LI 
Sbjct: 578 ARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 637

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LC+      A + F EM +R + P+   YT LIDG  +  ++ +A+ L   M + G+  
Sbjct: 638 ALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPP 697

Query: 184 DLNAYTSLVWGLSRCGHLQEA 204
           D   + +L  G  + GH+  A
Sbjct: 698 DYCTHNALFKGFDK-GHMYHA 717



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 118/274 (43%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C     E+++ L  EM E G   +    T LM+   K      A    DEML
Sbjct: 422 YNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEML 481

Query: 73  -----------DSRI----------------EVTV--------VTFCVLIDGLCKSGLVR 97
                      ++RI                EV +        VT+ V+IDGLCK+G ++
Sbjct: 482 SKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLK 541

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +A D   +M   GL P+   YT LI   C++  +  AR L + M    + P    YT LI
Sbjct: 542 DAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILI 601

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
               +  +   A     +M +VG++ +   Y  L+  L R G    A   FHEM+ RG+ 
Sbjct: 602 HTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLA 661

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P++     L+  +   GN  +AI L  EM   G+
Sbjct: 662 PNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI 695



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 121/248 (48%), Gaps = 3/248 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKEN--GLTANTVICTTLMDAYFKAGEPSE 63
           I+  +  Y T++     E + +++ +LL EM+    G   N V    ++    + G    
Sbjct: 239 IEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLEN 298

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L+D M  S+ + +  T+  LI  L + G V++       M + G+ P +  Y A+I 
Sbjct: 299 AAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIH 357

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K   +E A+  F EM    ++PD   Y ++++GY K  + KEAL L   +   G+  
Sbjct: 358 GLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAP 417

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +  Y +L+ G  R G L+EAR L  EM+ +G  PD      L+   ++  N+  A E  
Sbjct: 418 TVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFF 477

Query: 244 NEMMGRGL 251
           +EM+ +GL
Sbjct: 478 DEMLSKGL 485



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 111/249 (44%), Gaps = 2/249 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y T I    I      +  L   M   G+  +TV    ++D   K G 
Sbjct: 480 MLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 539

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  +M+   ++   +T+  LI   C+ GL+ EA      M   GL P+V  YT 
Sbjct: 540 LKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTI 599

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C++  +  A   F +M    + P+   Y  LI    +      A +  + M E G
Sbjct: 600 LIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERG 659

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT L+ G  R G+  +A  L+ EM   GI PD     +L K  +++G+M  AI
Sbjct: 660 LAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG-FDKGHMYHAI 718

Query: 241 E-LQNEMMG 248
           E L+N ++G
Sbjct: 719 EYLENIVLG 727



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 3/215 (1%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           +G+  +   C  ++     A    +  ++  EML   IE T+VT+  L+D   K G   E
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDE 261

Query: 99  AIDYFGRMPDF--GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
           A      M     G   N   Y  +I  L ++  +E A  L D M +      +  Y  L
Sbjct: 262 ASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPL 320

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           I   L+    ++   L+  M   G+   L  Y +++ GL +   ++ A++ F EM   G+
Sbjct: 321 ITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGL 380

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           LPD I   S+L  + + GN+ EA+ L  ++   GL
Sbjct: 381 LPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGL 415


>gi|399107200|gb|AFP20364.1| At1g03560-like protein, partial [Capsella grandiflora]
          Length = 212

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 10  MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 69

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 70  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSS 129

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 130 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 189

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 190 GCDQTVYTYTILISGMFK 207



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 4   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 63

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 64  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAIN 123

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 124 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 183

Query: 245 EM 246
            M
Sbjct: 184 RM 185



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 6   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 65

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 66  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSM 125

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 126 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 185



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 7   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 66

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 67  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMF 126

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 127 YSSLIDGLGKAGRIDEAERLFEEMSEKG 154


>gi|341605797|gb|AEK83001.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605799|gb|AEK83002.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605801|gb|AEK83003.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   +   
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|341605693|gb|AEK82949.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 103/196 (52%), Gaps = 1/196 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGL 195
           G D  +  YT L+ G+
Sbjct: 188 GCDQTVYTYTILISGM 203



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   +   
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++    K ++  Y  +I G C E K   +++LLS M+E GL  NT   TTL+D + K G 
Sbjct: 356 VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGN 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+D M        + T+  +IDGLCK G + EA     ++   GL  +   YT 
Sbjct: 416 FVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTI 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C++    R+   F++M K    PD  +YT LI  + + +  KE+  L      +G
Sbjct: 476 LMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLG 535

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTS++ G  R G+   A  LF  M   G  PD I   +L+    +   +D+A 
Sbjct: 536 LIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDAR 595

Query: 241 ELQNEMMGRGL 251
            L + MM +GL
Sbjct: 596 NLYDAMMDKGL 606



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   +  ++   C   +  +++  L+ M E G   +   CT ++DA+ + G 
Sbjct: 215 MCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGY 274

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +  +    +M++  +   V+ F  LI+GLCK G +++A +    M   G  PNV  +T 
Sbjct: 275 VNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334

Query: 121 LIDGLCKKNCIERARNLFDEMPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LIDGLCKK   E+A  LF ++ + D   P+   YTA+I+GY K +    A  L +RM E 
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  + N YT+L+ G  + G+   A  L   M   G  P+     +++    ++G++DEA
Sbjct: 395 GLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA 454

Query: 240 IELQNEMMGRGL 251
             L N++   GL
Sbjct: 455 YRLLNKVSVHGL 466



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M  +  K ++  + T+I GLC +   E + +L L  ++ +G   N    T +++ Y K  
Sbjct: 320 MVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED 379

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           + + A  LL  M +  +     T+  LIDG CK G    A +    M   G  PN+  Y 
Sbjct: 380 KLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYN 439

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+IDGLCKK  ++ A  L +++    +  D   YT L+  + +      +L   N+M +V
Sbjct: 440 AIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKV 499

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+++YT+L+    R   ++E+  LF E +  G++P +    S++  +   GN   A
Sbjct: 500 GFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLA 559

Query: 240 IELQNEMMGRG 250
           ++L   M   G
Sbjct: 560 VKLFQRMSNHG 570



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 111/245 (45%), Gaps = 1/245 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC +   + +  LL EM   G   N    TTL+D   K G   +A  L  +++
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLV 356

Query: 73  DSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            S   +  V T+  +I+G CK   +  A     RM + GL PN   YT LIDG CK    
Sbjct: 357 RSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNF 416

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            RA  L D M K    P+   Y A+IDG  K  S  EA  L N+++  G+  D   YT L
Sbjct: 417 VRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    R      + V F++M+  G  PD     +L+     +  M E+  L  E +  GL
Sbjct: 477 MSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGL 536

Query: 252 LSGSK 256
           +   K
Sbjct: 537 IPTKK 541



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 115/226 (50%), Gaps = 1/226 (0%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E ++ +  EM + G++ + V    ++ A    G   EA   L+ M++    V   T  ++
Sbjct: 206 EIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLI 265

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           ID  C+ G V   + YF +M + GL PNV  +TALI+GLCK+  I++A  L +EM +R  
Sbjct: 266 IDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGW 325

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEV-GVDLDLNAYTSLVWGLSRCGHLQEAR 205
            P+   +T LIDG  K    ++A  L  ++    G   +++ YT+++ G  +   L  A 
Sbjct: 326 KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAE 385

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L   M  +G++P+     +L+  H + GN   A EL + M   G 
Sbjct: 386 MLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGF 431



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 3/241 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++AD   Y  ++   C ++    S +  ++M + G T +    TTL+  + +  +  E+ 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESE 525

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +E +   +  T  T+  +I G C+ G    A+  F RM + G  P+   Y ALI GL
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGL 585

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK++ ++ ARNL+D M  + + P       L   Y K +    A+N+ +R+ +      +
Sbjct: 586 CKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV 645

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
           N   +LV  L   G L  A + FH+++ +    + +  +  + K YE        EL   
Sbjct: 646 N---TLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSER 702

Query: 246 M 246
           +
Sbjct: 703 I 703



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 1/232 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +++  ++ EM+  GL  +T     ++D     G    A ++  EM    +    V+F 
Sbjct: 169 KLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFK 228

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +++   C  G V EA  +   M + G   + A  T +ID  C+K  + R    F +M + 
Sbjct: 229 LMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEM 288

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + P+   +TALI+G  K  S K+A  L   M   G   ++  +T+L+ GL + G  ++A
Sbjct: 289 GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348

Query: 205 RVLFHEMI-GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             LF +++   G  P+     +++  + +   ++ A  L + M  +GL+  +
Sbjct: 349 FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 115/224 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + IK ++  Y  +I G C + K +++  L  EM+  GL  +TV   TL+ A  ++G    
Sbjct: 315 RGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 374

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L  EM      + + T+CVL+DGLCK+G + EAID F  +      PN+ V++ L+D
Sbjct: 375 AQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLD 434

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G+C+   +E A   FDE+ K  + PDT AY  LI+G        EA+ L  +M E G   
Sbjct: 435 GMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 494

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           D   +  ++  L +   + EA  L  EM  R   PDE +   LL
Sbjct: 495 DSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + D+  Y T++ GLC+  + ED+  L   + + G+  N      L++ Y K  +
Sbjct: 277 MHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 336

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L +EM    ++ + VT+  LI  LC+SG VR A   F  M   G    ++ Y  
Sbjct: 337 IDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 396

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +E A +LF  + K +  P+   ++ L+DG  +    +EA    + +++ G
Sbjct: 397 LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 456

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D  AY  L+ GL   G L EA  L  +M  +G LPD I    +++   +   + EAI
Sbjct: 457 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 516

Query: 241 ELQNEMMGRGL 251
           +L  EM  R  
Sbjct: 517 QLLEEMRNRNF 527



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 1/250 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG N K D+  YG II  LC +    ++  + SEM   G+  + V+ ++LMD   + G 
Sbjct: 138 MKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGR 196

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL    EM    I   V T+  LI GL ++GL +E   +   M D G  P+   +T 
Sbjct: 197 LKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI 256

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK+  +  A+ + + M  +   PD   Y  L++G       ++A  L   + + G
Sbjct: 257 LIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 316

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L++ +Y  L+ G  +   + EA  LF EM  +G+ P  +   +L+    + G +  A 
Sbjct: 317 IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 376

Query: 241 ELQNEMMGRG 250
           +L  EM   G
Sbjct: 377 KLFVEMQTCG 386



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 123/252 (48%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G+ I AD+  Y ++I GL     +++    L+ M + G + +    T L+D   K G+
Sbjct: 207 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 266

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L+ M     E  ++T+  L++GLC  G + +A   F  + D G+  NV  Y  
Sbjct: 267 VGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 326

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   I+ A  LF+EM  + + P T  Y  LI    +    + A  L   M   G
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD-EILCISLLKKHYERGNMDEA 239
             L L+ Y  L+ GL + GHL+EA  LF  +      P+ E+  I LL      G ++EA
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI-LLDGMCRAGKLEEA 445

Query: 240 IELQNEMMGRGL 251
            +  +E+   GL
Sbjct: 446 WKQFDEISKNGL 457



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 121/255 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D   +  +I GLC E K  +++ +L  M   G   + +   TLM+     G+
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L + + D  I++ V ++ +LI+G CK   + EA   F  M   GL P+   Y  
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC+   +  A+ LF EM         + Y  L+DG  K+   +EA++L   + +  
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  ++ L+ G+ R G L+EA   F E+   G+ PD I    L+     +G + EA+
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 481

Query: 241 ELQNEMMGRGLLSGS 255
           +L  +M  +G L  S
Sbjct: 482 KLLWQMEEKGCLPDS 496



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 119/251 (47%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   YG +I GLC   K   +  L  +MK N    +      ++D+  K G 
Sbjct: 103 MTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMIIDSLCKDGM 161

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL +  EM+ + I   VV +  L+DGLC+ G ++EA+++F  M   G+  +V  Y +
Sbjct: 162 TTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNS 221

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL +    +      + M  R   PD   +T LIDG  K     EA  +   M   G
Sbjct: 222 LIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKG 281

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+  Y +L+ GL   G L++A  LF  +  RGI  +      L+  + +   +DEA 
Sbjct: 282 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAF 341

Query: 241 ELQNEMMGRGL 251
            L  EM  +GL
Sbjct: 342 RLFEEMRPKGL 352



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 1/213 (0%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           + G   + V  TTL+   +      +A+ L DEM +  +     T+ +LI+GLCK+    
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            AI    +M       +V  Y  +ID LCK      A ++F EM    ++PD   Y++L+
Sbjct: 130 LAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DG  +    KEAL     M   G+  D+  Y SL+ GLSR G  +E     + M+ RG  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           PD      L+    + G + EA ++   M  +G
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKG 281



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 71/142 (50%), Gaps = 1/142 (0%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G  P+    T L+ G+  +N I  A  LFDEM ++ +  D   Y  LI+G  K      A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           + L  +M +     D+  Y  ++  L + G   EA  +F EMIG GILPD ++  SL+  
Sbjct: 132 IKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
               G + EA+E   EM GRG+
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGI 212


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 1/239 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KGK I+AD+ +Y TII  LC      D+  L +EM   G+  N V   +L+      G  
Sbjct: 232 KGK-IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S+A  LL +M++ +I   VVTF  LID   K G + EA   +  M    + P++  Y++L
Sbjct: 291 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 350

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+G C  + ++ A+++F+ M  +D  P+   Y  LI G+ K +  +E + L   M++ G+
Sbjct: 351 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 410

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +   Y +L+ GL + G    A+ +F +M+  G+ PD I    LL    + G +++A+
Sbjct: 411 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 469



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 133/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + DL  YGT++ GLC     + +  LL +M++  + A+ VI TT++DA      
Sbjct: 195 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 254

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++AL+L  EM +  I   VVT+  LI  LC  G   +A      M +  ++PNV  ++A
Sbjct: 255 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 314

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+  +  A  L+DEM KR + PD   Y++LI+G+  H+   EA ++   M    
Sbjct: 315 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 374

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y +L+ G  +   ++E   LF EM  RG++ + +   +L++  ++ G+ D A 
Sbjct: 375 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 434

Query: 241 ELQNEMMGRGL 251
           ++  +M+  G+
Sbjct: 435 KIFKKMVSDGV 445



 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 124/243 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GL + +K  ++  L+  M   G   +     T+++   K G+   ALSLL +M 
Sbjct: 172 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 231

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             +IE  VV +  +ID LC    V +A++ F  M + G+ PNV  Y +LI  LC      
Sbjct: 232 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 291

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  +M +R + P+   ++ALID ++K     EA  L + M +  +D D+  Y+SL+
Sbjct: 292 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 351

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G      L EA+ +F  MI +   P+ +   +L+K   +   ++E +EL  EM  RGL+
Sbjct: 352 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 411

Query: 253 SGS 255
             +
Sbjct: 412 GNT 414



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 109/219 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ ++  Y ++I  LC   ++ D+  LLS+M E  +  N V  + L+DA+ K G+
Sbjct: 265 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 324

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEM+   I+  + T+  LI+G C    + EA   F  M      PNV  Y  
Sbjct: 325 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 384

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E    LF EM +R ++ +T  Y  LI G  +      A  +  +M   G
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  D+  Y+ L+ GL + G L++A V+F  +    + PD
Sbjct: 445 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 483



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  DL  Y  +I   C  S+   +  +L +M + G   + V  ++L++ Y     
Sbjct: 90  MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 149

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA++L+D+M     +   VTF  LI GL       EA+    RM   G  P++  Y  
Sbjct: 150 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 209

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK+  I+ A +L  +M K  +  D   YT +ID    +++  +ALNL   M   G
Sbjct: 210 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 269

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y SL+  L   G   +A  L  +MI R I P+ +   +L+    + G + EA 
Sbjct: 270 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 329

Query: 241 ELQNEMMGRGL 251
           +L +EM+ R +
Sbjct: 330 KLYDEMIKRSI 340



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 122/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  D+  Y ++I G C+  + +++K +   M       N V   TL+  + KA  
Sbjct: 335 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L  EM    +    VT+  LI GL ++G    A   F +M   G+ P++  Y+ 
Sbjct: 395 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 454

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +E+A  +F+ + K  M PD   Y  +I+G  K    ++  +L   ++  G
Sbjct: 455 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 514

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YT+++ G  R G  +EA  LF EM   G LP+     +L++     G+   + 
Sbjct: 515 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 574

Query: 241 ELQNEMMGRGLL 252
           EL  EM   G +
Sbjct: 575 ELIKEMRSCGFV 586



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 106/219 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   ++  Y T+I G C   + E+   L  EM + GL  NTV   TL+   F+AG+
Sbjct: 370 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 429

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+   +   ++T+ +L+DGLCK G + +A+  F  +    + P++  Y  
Sbjct: 430 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 489

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   +E   +LF  +  + + P+   YT +I G+ +    +EA  L   M E G
Sbjct: 490 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 549

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              +   Y +L+    R G    +  L  EM   G + D
Sbjct: 550 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 588



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 107/227 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +D+  L  EM ++    + V    L+ A  K  +    +SL + M + RI   + ++ 
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI+  C+   +  A+   G+M   G  P++   ++L++G C    I  A  L D+M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           +  P+T  +  LI G   H    EA+ L +RM   G   DL  Y ++V GL + G +  A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L  +M    I  D ++  +++       N+++A+ L  EM  +G+
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 270


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 1/239 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KGK I+A++ +Y TII GLC     +D+  L ++M+  G+  +     +L+      G  
Sbjct: 249 KGK-IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S+A  LL +M++ +I   VVTF  LID   K G + EA   F  M    + PN+  Y +L
Sbjct: 308 SDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 367

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+G C  + ++ A+ +F  M  +D +PD   Y  LI G+ K +  +E + L   M++ G+
Sbjct: 368 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 427

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +   Y +L+ GL + G    A+ +F +M+  G+ PD I    LL    + G +++A+
Sbjct: 428 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 486



 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 125/249 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D   + T+I GL + +K  ++  L+  M   G   +     T+++   K G+   ALS
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M   +IE  VV +  +IDGLCK   + +A D F +M   G+ P+V  Y +LI  LC
Sbjct: 243 LLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L  +M +R + P+   + +LID + K     EA  L + M +  +D ++ 
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 362

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y SL+ G      L EA+ +F  M+ +  LPD +   +L+K   +   ++E +EL  EM
Sbjct: 363 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREM 422

Query: 247 MGRGLLSGS 255
             RGL+  +
Sbjct: 423 SQRGLVGNT 431



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 111/219 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K IK D+  Y ++I  LC   ++ D+  LLS+M E  +  N V   +L+DA+ K G+
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK 341

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEM+   I+  +VT+  LI+G C    + EA   F  M      P+V  Y  
Sbjct: 342 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 401

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E    LF EM +R ++ +T  Y  LI G  +      A  +  +M   G
Sbjct: 402 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 461

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  D+  Y+ L+ GL + G L++A V+F  +    + P+
Sbjct: 462 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPN 500



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + DL  YGT++ GLC     + +  LL +M++  + AN VI  T++D   K   
Sbjct: 212 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKH 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L ++M    I+  V T+  LI  LC  G   +A      M +  ++PNV  + +
Sbjct: 272 MDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNS 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+  +  A  LFDEM +R + P+   Y +LI+G+  H+   EA  +   M    
Sbjct: 332 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 391

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +L+ G  +   ++E   LF EM  RG++ + +   +L++  ++ G+ D A 
Sbjct: 392 CLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 451

Query: 241 ELQNEMMGRGL 251
           ++  +M+  G+
Sbjct: 452 KIFKKMVSDGV 462



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 125/244 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+    +++ G C   +  ++  L+ +M E G   +TV   TL+   F   + SEA++L+
Sbjct: 150 DIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALI 209

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+    +  + T+  +++GLCK G +  A+    +M    +  NV +Y  +IDGLCK 
Sbjct: 210 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKY 269

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A +LF++M  + + PD   Y +LI     +  + +A  L + M E  ++ ++  +
Sbjct: 270 KHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 329

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SL+   ++ G L EA  LF EMI R I P+ +   SL+        +DEA ++   M+ 
Sbjct: 330 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 389

Query: 249 RGLL 252
           +  L
Sbjct: 390 KDCL 393



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 123/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  ++  Y ++I G C+  + ++++ + + M       + V   TL+  + KA  
Sbjct: 352 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L  EM    +    VT+  LI GL ++G    A   F +M   G+ P++  Y+ 
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 471

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +E+A  +F+ + K  M P+   Y  +I+G  K    ++  +L   ++  G
Sbjct: 472 LLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YT+++ G  R G  +EA  LF EM   G LPD     +L++     G+   + 
Sbjct: 532 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA 591

Query: 241 ELQNEMMGRGLL 252
           EL  EM   G +
Sbjct: 592 ELIKEMRSCGFV 603



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 121/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++   C  S+   +  +L +M + G   + V  ++L++ Y      SEA++L+D+M+
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +   VTF  LI GL       EA+    RM   G  P++  Y  +++GLCK+  I+
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L  +M K  +  +   Y  +IDG  K++   +A +L N+M   G+  D+  Y SL+
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLI 298

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L   G   +A  L  +MI R I P+ +   SL+    + G + EA +L +EM+ R +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 106/219 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   D+  Y T+I G C   + E+   L  EM + GL  NTV   TL+   F+AG+
Sbjct: 387 MVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 446

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+   +   ++T+ +L+DGLCK G + +A+  F  +    + PN+  Y  
Sbjct: 447 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNI 506

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   +E   +LF  +  + + P+   YT +I G+ +    +EA  L   M E G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 566

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              D   Y +L+    R G    +  L  EM   G + D
Sbjct: 567 TLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 605



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 113/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  +   +KF+    L  +M+  G+  N    + L++ + +  +   AL++L +M+
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMM 143

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E  +VT   L++G C    + EA+    +M + G  P+   +  LI GL   N   
Sbjct: 144 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 203

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L D M  R   PD   Y  +++G  K      AL+L  +M +  ++ ++  Y +++
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII 263

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +  H+ +A  LF++M  +GI PD     SL+      G   +A  L ++M+ R +
Sbjct: 264 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKI 322



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 110/229 (48%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E K +D+  L  EM ++    + +  + L+ A  K  +    +SL ++M +  I     T
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           + +L++  C+   +  A+   G+M   G  P++   ++L++G C    I  A  L D+M 
Sbjct: 119 YSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMV 178

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           +    PDT  +  LI G   H    EA+ L +RM   G   DL  Y ++V GL + G + 
Sbjct: 179 EMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 238

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            A  L  +M    I  + ++  +++    +  +MD+A +L N+M  +G+
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 287


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 133/250 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ DL  +  +I   C   +   +  +L +M + G   + V   +L++ + +    S+A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL+D+M++      +V +  +ID LCK+  V +A+D+F  +   G+ PNV  YTAL++GL
Sbjct: 176 SLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGL 235

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  L  +M KR + P+   Y+AL+D ++K+    EA  +   M  + +D D+
Sbjct: 236 CNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDI 295

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+SL+ GL     + EA  +F  M+ +G  PD +   +L+    +   +++ ++L  +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRK 355

Query: 246 MMGRGLLSGS 255
           M  RGL++ +
Sbjct: 356 MSQRGLVNNT 365



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 128/248 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ ++  Y  ++ GLC   ++ D+  LL +M +  +T N +  + L+DA+ K G+  E
Sbjct: 219 KGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLE 278

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  + +EM+   I+  +VT+  LI+GLC    + EA   F  M   G  P+V  Y  LI+
Sbjct: 279 AKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLIN 338

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +E    LF +M +R ++ +T  Y  LI G+ +     +A    ++M   GV  
Sbjct: 339 GFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP 398

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y  L+ GL   G L++A V+F +M    +  D +   ++++   + G +++A  L 
Sbjct: 399 DIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLF 458

Query: 244 NEMMGRGL 251
             +  +GL
Sbjct: 459 CSLSLKGL 466



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 111/213 (52%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y  II  LC   +  D+     E+   G+  N V  T L++    +G  ++A  
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAAR 246

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M+  +I   V+T+  L+D   K+G V EA + F  M    + P++  Y++LI+GLC
Sbjct: 247 LLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLC 306

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
             + I+ A  +FD M  +   PD  +Y  LI+G+ K +  ++ + L  +M++ G+  +  
Sbjct: 307 LHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTV 366

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            Y +L+ G  + G + +A+  F +M   G+ PD
Sbjct: 367 TYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPD 399



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 123/238 (51%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G+++ G C  ++  D+  L+ +M E G   + V    ++D+  K    ++AL    E+  
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGR 218

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             I   VVT+  L++GLC SG   +A      M    + PNV  Y+AL+D   K   +  
Sbjct: 219 KGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLE 278

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A+ +F+EM +  + PD   Y++LI+G   H+   EA  + + M   G   D+ +Y +L+ 
Sbjct: 279 AKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLIN 338

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  +   +++   LF +M  RG++ + +   +L++  ++ G++D+A E  ++M   G+
Sbjct: 339 GFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGV 396



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 1/221 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +I  D+  Y ++I GLC+  + +++  +   M   G   + V   TL++ + KA    + 
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDG 349

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + L  +M    +    VT+  LI G  + G V +A ++F +M  FG+ P++  Y  L+ G
Sbjct: 350 MKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGG 409

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC    +E+A  +F++M K +M  D   YT +I G  K    ++A  L   ++  G+  D
Sbjct: 410 LCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPD 469

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP-DEILCI 224
           +  YT+++ GL   G   E   L+ +M   G++  D +LC+
Sbjct: 470 IVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSMLCL 510



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 104/223 (46%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  D+  L  EM +     + V    L+ A  K  +    +SL  +M    I   + TF 
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           ++I+  C    V  A+   G+M   G  P+     +L++G C++N +  A +L D+M + 
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PD  AY A+ID   K     +AL+    +   G+  ++  YT+LV GL   G   +A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L  +MI R I P+ I   +LL    + G + EA E+  EM+
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMV 287



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 10/210 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  Y T+I G C   + ED   L  +M + GL  NTV   TL+  +F+ G+
Sbjct: 321 MVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGD 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A     +M    +   + T+ +L+ GLC +GL+ +A+  F  M    +  ++  YT 
Sbjct: 381 VDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTT 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G+CK   +E A  LF  +  + + PD   YT ++ G        E   L  +M + G
Sbjct: 441 VIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEG 500

Query: 181 V----------DLDLNAYTSLVWGLSRCGH 200
           +          D D+     L+  +  CG+
Sbjct: 501 LMKNDSMLCLGDGDITISAELIKKMLSCGY 530



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 91/189 (48%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A++L  EM+ +R   ++V F  L+  + K       I    +M   G+  ++  +  +I
Sbjct: 68  DAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C    +  A ++  +M K    PD     +L++G+ +     +A++L ++M E+G  
Sbjct: 128 NCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYR 187

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ AY +++  L +   + +A   F E+  +GI P+ +   +L+      G  ++A  L
Sbjct: 188 PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARL 247

Query: 243 QNEMMGRGL 251
             +M+ R +
Sbjct: 248 LRDMIKRKI 256


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  127 bits (320), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 126/231 (54%), Gaps = 6/231 (2%)

Query: 21  CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           C+ S F      L ++ + G   +    T+L++ +       EA+S++++M++  I+  V
Sbjct: 123 CLASSF------LGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDV 176

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           V +  +ID LCK+G V  A+  F +M ++G+ P+V +YT+L++GLC       A  L   
Sbjct: 177 VIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRG 236

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M KR + PD   + ALID ++K     +A  L N M ++ +  ++  YTSL+ GL   G 
Sbjct: 237 MMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGR 296

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L EAR +F+ M  +G  PD +   SL+    +   +++A+++  EM  +GL
Sbjct: 297 LDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGL 347



 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 131/244 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK D+ +Y TII  LC     +++  L ++M+  G+  + V+ T+L++    +G   +A 
Sbjct: 172 IKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 231

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL  M+  +I+  V+TF  LID   K G + +A + +  M    + PN+  YT+LI+GL
Sbjct: 232 LLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGL 291

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C +  ++ AR +F  M  +   PD  AYT+LI+G+ K +  ++A+ +   M++ G+  + 
Sbjct: 292 CMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNT 351

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+ G    G    A+ +F  M+ RG+ P+      LL      G +++A+ +  +
Sbjct: 352 ITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFED 411

Query: 246 MMGR 249
           M  R
Sbjct: 412 MQKR 415



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 132/246 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + D+  + ++I G C+ ++ E++  ++++M E G+  + VI TT++D+  K G    AL
Sbjct: 137 FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNAL 196

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL ++M +  I   VV +  L++GLC SG  R+A      M    + P+V  + ALID  
Sbjct: 197 SLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAF 256

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K+  +  A+ L++EM +  + P+   YT+LI+G        EA  +   M   G   D+
Sbjct: 257 VKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDV 316

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            AYTSL+ G  +C  +++A  +F+EM  +G+  + I   +L++     G  + A E+   
Sbjct: 317 VAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGH 376

Query: 246 MMGRGL 251
           M+ RG+
Sbjct: 377 MVSRGV 382



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 114/219 (52%), Gaps = 3/219 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    D+  Y ++I G C   K ED+  +  EM + GLT NT+  TTL+  +   G+
Sbjct: 307 METKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGK 366

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF---GLHPNVAV 117
           P+ A  +   M+   +   + T+ VL+  LC +G V +A+  F  M      G+ PN+  
Sbjct: 367 PNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRT 426

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y  L+ GLC    +E+A  +F +M KRDM      YT +I G  K    K+ALNL   + 
Sbjct: 427 YNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLP 486

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
             GV  ++  YT+++ GL R G + EA VLF +M   G+
Sbjct: 487 SKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 3/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ D+ +Y +++ GLC   ++ D+ LLL  M +  +  + +    L+DA+ K G+
Sbjct: 202 MENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGK 261

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L +EM+   I   + T+  LI+GLC  G + EA   F  M   G  P+V  YT+
Sbjct: 262 LLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTS 321

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +E A  +F EM ++ +  +T  YT LI G+        A  +   M   G
Sbjct: 322 LINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRG 381

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR---GILPDEILCISLLKKHYERGNMD 237
           V  ++  Y  L+  L   G + +A ++F +M  R   G+ P+      LL      G ++
Sbjct: 382 VPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLE 441

Query: 238 EAIELQNEMMGRGL 251
           +A+ +  +M  R +
Sbjct: 442 KALMVFGDMQKRDM 455



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 113/223 (50%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           +F ++  L S M E+    + +  T L++   K  +    ++L   +    +   + T  
Sbjct: 51  QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCN 110

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +L++  C+S     A  + G++   G  P++  +T+LI+G C  N IE A ++ ++M + 
Sbjct: 111 LLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEM 170

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   YT +ID   K+     AL+L N+M   G+  D+  YTSLV GL   G  ++A
Sbjct: 171 GIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 230

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            +L   M+ R I PD I   +L+    + G + +A EL NEM+
Sbjct: 231 DLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMI 273



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 125/250 (50%), Gaps = 3/250 (1%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +I  ++  Y ++I GLC+E + ++++ +   M+  G   + V  T+L++ + K  +  +A
Sbjct: 276 SIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDA 335

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + +  EM    +    +T+  LI G    G    A + FG M   G+ PN+  Y  L+  
Sbjct: 336 MKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHC 395

Query: 125 LCKKNCIERARNLFDEMPKRDM---IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           LC    + +A  +F++M KR++    P+   Y  L+ G   +   ++AL +   M +  +
Sbjct: 396 LCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDM 455

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           D+ +  YT ++ G+ + G +++A  LF  +  +G+ P+ +   +++   +  G M EA  
Sbjct: 456 DIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHV 515

Query: 242 LQNEMMGRGL 251
           L  +M   G+
Sbjct: 516 LFRKMKEDGV 525



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 94/188 (50%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +EAL L   M++SR   +++ F  L++ + K       I+    +   G+  ++     L
Sbjct: 53  NEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLL 112

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++  C+ +    A +   ++ K    PD   +T+LI+G+      +EA+++ N+M E+G+
Sbjct: 113 MNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGI 172

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D+  YT+++  L + GH+  A  LF++M   GI PD ++  SL+      G   +A  
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 242 LQNEMMGR 249
           L   MM R
Sbjct: 233 LLRGMMKR 240



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 5/176 (2%)

Query: 80  VVTFC----VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           V  FC    +L +GL  S    EA+D F  M +    P++  +T L++ + K    +   
Sbjct: 33  VRAFCNYREILRNGL-HSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVI 91

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
           NL   +    +  D      L++ + +      A +   ++ ++G + D+  +TSL+ G 
Sbjct: 92  NLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGF 151

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                ++EA  + ++M+  GI PD ++  +++    + G++D A+ L N+M   G+
Sbjct: 152 CLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGI 207


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 125/251 (49%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+ K  + D+  Y T++ GLC+  + ED+  L   + + G+  N      L++ Y K  +
Sbjct: 1216 MRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 1275

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA    +EM    ++ + VT+  LI  LC+SG VR A   F  M   G    ++ Y  
Sbjct: 1276 IDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 1335

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L+DGLCK   +E A +LF  + K +  P+   ++ L+DG  +    +EA    + +++ G
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            ++ D  AY  L+ GL   G L EA  L  +M  +G LPD I    +++   +   + EAI
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455

Query: 241  ELQNEMMGRGL 251
            +L  EM  R  
Sbjct: 1456 QLLEEMRNRNF 1466



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 114/224 (50%)

Query: 4    KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            + IK ++  Y  +I G C + K +++     EM+  GL  +TV   TL+ A  ++G    
Sbjct: 1254 RGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRT 1313

Query: 64   ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            A  L  EM      + + T+CVL+DGLCK+G + EA+D F  +      PN+ V++ L+D
Sbjct: 1314 AQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLD 1373

Query: 124  GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            G+C+   +E A   FDE+ K  + PDT AY  LI+G        EA+ L  +M E G   
Sbjct: 1374 GMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 1433

Query: 184  DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            D   +  ++  L +   + EA  L  EM  R   PDE +   LL
Sbjct: 1434 DSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 123/255 (48%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  +    D   +  +I GLC E K  +++ +L  M+  G   + +   TLM+     G+
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              +A  L + + D  I++ V ++ +LI+G CK   + EA  +F  M   GL P+   Y  
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LI  LC+   +  A+ LF EM         + Y  L+DG  K+   +EA++L   + +  
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               ++  ++ L+ G+ R G L+EA   F E+   G+ PD I    L+     +G + EA+
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 1420

Query: 241  ELQNEMMGRGLLSGS 255
            +L  +M  +G L  S
Sbjct: 1421 KLLWQMEEKGCLPDS 1435



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 121/250 (48%), Gaps = 1/250 (0%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            MKG N K D+  YG II  LC +    ++  + SEM   G+  + V+ ++LMD   + G 
Sbjct: 1077 MKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGR 1135

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EAL    EM    I   V T+  LI GL ++GL +E   +   M D G  P+   +T 
Sbjct: 1136 LKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI 1195

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LIDGLCK+  +  A+ + + M  +   PD   Y  L++G       ++A  L   + + G
Sbjct: 1196 LIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG 1255

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + L++ +Y  L+ G  +   + EA   F EM  +G+ P  +   +L+    + G +  A 
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315

Query: 241  ELQNEMMGRG 250
            +L  EM   G
Sbjct: 1316 KLFVEMQTCG 1325



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 122/252 (48%), Gaps = 2/252 (0%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+G+ I AD+  Y ++I GL     +++    L+ M + G + +    T L+D   K G+
Sbjct: 1146 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 1205

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA  +L+ M     E  ++T+  L++GLC  G + +A   F  + D G+  NV  Y  
Sbjct: 1206 VGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 1265

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LI+G CK   I+ A   F+EM  + + P T  Y  LI    +    + A  L   M   G
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD-EILCISLLKKHYERGNMDEA 239
              L L+ Y  L+ GL + GHL+EA  LF  +      P+ E+  I LL      G ++EA
Sbjct: 1326 QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSI-LLDGMCRAGKLEEA 1384

Query: 240  IELQNEMMGRGL 251
             +  +E+   GL
Sbjct: 1385 WKQFDEISKNGL 1396



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 118/251 (47%), Gaps = 1/251 (0%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K +  D   YG +I GLC   K   +  L  +MK N    +      ++DA  K G 
Sbjct: 1042 MTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGM 1100

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +EAL +  EM+ + I   VV +  L+DGLC+ G ++EA+++F  M   G+  +V  Y +
Sbjct: 1101 TTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNS 1160

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LI GL +    +      + M  R   PD   +T LIDG  K     EA  +   M   G
Sbjct: 1161 LIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKG 1220

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             + D+  Y +L+ GL   G L++A  LF  +  RGI  +      L+  + +   +DEA 
Sbjct: 1221 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAF 1280

Query: 241  ELQNEMMGRGL 251
                EM  +GL
Sbjct: 1281 RFFEEMRPKGL 1291



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 99/218 (45%), Gaps = 5/218 (2%)

Query: 38   ENGLTANTVICTT----LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS 93
            +  L +  + CT     L+ +  K G  S    +  ++ D  I+  + T  +LI   C  
Sbjct: 935  DRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSL 994

Query: 94   GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
              V      FG     G  P+    T L+ G+  +N I  A  LFDEM K+ ++ D   Y
Sbjct: 995  RAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTY 1054

Query: 154  TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
              LI+G  K      A+ L  +M +     D+  Y  ++  L + G   EA  +F EMIG
Sbjct: 1055 GILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIG 1113

Query: 214  RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             GILPD ++  SL+      G + EA+E   EM GRG+
Sbjct: 1114 AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGI 1151



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 53/124 (42%)

Query: 134  ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
            A  LFD     + +P T  +  L+    K   +     +  ++ +VG+  DL     L+ 
Sbjct: 930  AIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIH 989

Query: 194  GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
                   +     +F   + RG  PD +   +L+K  +    + +A++L +EM  +GLL 
Sbjct: 990  CCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLG 1049

Query: 254  GSKN 257
             +K 
Sbjct: 1050 DAKT 1053


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 2/242 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ GLC   +  ++  LL  M+ +G+ A+ V   TL+     A E   AL LLDEM 
Sbjct: 126 YTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMC 185

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S ++  VV +  L+ G C+SG  ++    F  M   G+ P+V ++T LID LCK+    
Sbjct: 186 GSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTG 245

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + D M +R + P+   Y  LI+   K  S +EAL L+  M + GV  D+  Y +L+
Sbjct: 246 KAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLI 305

Query: 193 WGLSRCGHLQEARVLFHEMI-GRGIL-PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GLS    + EA     EMI G  ++ PD +   S++    + G M +A++++  M  RG
Sbjct: 306 AGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERG 365

Query: 251 LL 252
            +
Sbjct: 366 CM 367



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 2/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++AD+  YGT+I GLC  S+ + +  LL EM  +G+  N V+ + L+  Y ++G 
Sbjct: 149 MQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGR 208

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   + ++M    I+  V+ F  LID LCK G   +A      M   GL PNV  Y  
Sbjct: 209 WQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNV 268

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE-- 178
           LI+ LCK+  +  A  L  EM  + + PD   Y  LI G        EA++    M +  
Sbjct: 269 LINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGD 328

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             V+ D+  + S++ GL + G + +A  +   M  RG + + +    L+        +  
Sbjct: 329 TVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKM 388

Query: 239 AIELQNEMMGRGL 251
           A+ L +E+   GL
Sbjct: 389 AMNLMDELAISGL 401



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 5/240 (2%)

Query: 13  YGTIIWGLCIES--KFEDSKLLLSEMKENGLTA---NTVICTTLMDAYFKAGEPSEALSL 67
           Y T++  LC         ++ LL +M      A   N V  TT+M     +    EA++L
Sbjct: 86  YNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVAL 145

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L  M  S +   VVT+  LI GLC +  +  A++    M   G+ PNV VY+ L+ G C+
Sbjct: 146 LRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCR 205

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
               +    +F++M +R + PD   +T LID   K     +A  +K+ M + G++ ++  
Sbjct: 206 SGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVT 265

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  L+  L + G ++EA  L  EM  +G+ PD +   +L+        MDEA+    EM+
Sbjct: 266 YNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMI 325



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 38/289 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++  Y  +I  LC E    ++  L  EM + G+  + V   TL+       E
Sbjct: 254 MVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLE 313

Query: 61  PSEALSLLDEML--DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
             EA+S L+EM+  D+ +E  VVTF  +I GLCK G + +A+     M + G   N+  Y
Sbjct: 314 MDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTY 373

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY------------------ 160
             LI G  + + ++ A NL DE+    + PD+  Y+ LI+G+                  
Sbjct: 374 NYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQ 433

Query: 161 --LKHESF---------------KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
             +K E F               + A+ L N M +    LD  AY++++ G  + G ++ 
Sbjct: 434 RGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDK-NCGLDAIAYSTMIHGACKSGDMKT 492

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            + L  +M+  G+ PD +    L+  + + G+++EA  +  +M   G +
Sbjct: 493 VKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFV 541



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 1/246 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  + ++I GLC   +   +  +   M E G   N V    L+  + +  +   A+
Sbjct: 331 VEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAM 390

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L+DE+  S +E    T+ +LI+G  K   V  A  +   M   G+   +  Y  L+  +
Sbjct: 391 NLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAM 450

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C++  +ERA  LF+EM K   + D  AY+ +I G  K    K    L   M + G+  D 
Sbjct: 451 CQQGMMERAMGLFNEMDKNCGL-DAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDA 509

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+ L+   ++ G L+EA  +  +M   G +PD  +  SL+K +   G  D+ ++L +E
Sbjct: 510 VTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHE 569

Query: 246 MMGRGL 251
           M  + +
Sbjct: 570 MRAKNV 575



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 8/208 (3%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG-----LVREAIDYF 103
             L++   +    +EA SLL  + D R     V++  ++  LC+ G       R  +   
Sbjct: 55  AALLNRRLRGAPVTEACSLLSALPDVR---DAVSYNTVLAALCRRGGDHLRQARSLLVDM 111

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            R       PN   YT ++ GLC       A  L   M    +  D   Y  LI G    
Sbjct: 112 SREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDA 171

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
                AL L + M   GV  ++  Y+ L+ G  R G  Q+   +F +M  RGI PD I+ 
Sbjct: 172 SELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMF 231

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L+    + G   +A ++++ M+ RGL
Sbjct: 232 TGLIDDLCKEGKTGKAAKVKDMMVQRGL 259



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 85/171 (49%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           V++  ++ GLC S    EA+     M   G+  +V  Y  LI GLC  + ++ A  L DE
Sbjct: 124 VSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDE 183

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M    + P+   Y+ L+ GY +   +++   +   M+  G+  D+  +T L+  L + G 
Sbjct: 184 MCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGK 243

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +A  +   M+ RG+ P+ +    L+    + G++ EA+ L+ EM  +G+
Sbjct: 244 TGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGV 294


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 119/234 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I  LC +        +  EM   G+  N ++ ++L++   + G+  EA++L DEM+
Sbjct: 82  YGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMV 141

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+  V+T+  LI   C+ GL +EA   F +M   G+ P+V  +T LID L KK  ++
Sbjct: 142 SQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQ 201

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F+ M K+   P+   Y +L++G   H     A+ L   M E G+ +D+ +Y +L+
Sbjct: 202 EAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLI 261

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            G    G  +EA  LF +M    + P       LLK  Y+ G +  A EL N M
Sbjct: 262 NGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNM 315



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 126/245 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + +L    T++ G+C E K  D+  L  +M  +G   + ++   L++A  K  +   A+ 
Sbjct: 6   QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L   ML         T+ ++ID LCK GL  + +  F  M + G+ PNV VY++LI+GLC
Sbjct: 66  LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +   +  A NLFDEM  + +  +   Y +LI    +   +KEA    ++M   G+  D+ 
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +T+L+  LS+ G +QEA  +F  MI +G  P+ +   SLL        MD A+ L   M
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVM 245

Query: 247 MGRGL 251
           + RG+
Sbjct: 246 VERGI 250



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 121/238 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++  Y +++ GLC+  + + +  L   M E G+  + +   TL++ Y  +G+  EA++L 
Sbjct: 218 NIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLF 277

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M    +  ++ T+ +L+  L ++G +R A + F  M   G  P++  YT L+DGLCK 
Sbjct: 278 RKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKN 337

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
            CIE A ++F  +      P    Y+ LI G  +   ++ A+ + + +  VG+  ++  Y
Sbjct: 338 GCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTY 397

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             ++ GL + G L EA  LF +M   G   DEI    +++   +   + +A+E    M
Sbjct: 398 NIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRM 455



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 112/227 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK D+  Y T+I G C   K E++  L  +M+   LT +    T L+ A ++ G 
Sbjct: 245 MVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGR 304

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L + M       ++ T+ VL+DGLCK+G + EAID F  +      P++ +Y+ 
Sbjct: 305 IRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSI 364

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G+ +    E A  +FDE+P   ++P+   Y  +I+G  K     EA  L  +M E G
Sbjct: 365 LIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESG 424

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            + D  ++  ++ G  +   +Q+A      M  +   P++ + + L+
Sbjct: 425 CEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLV 471



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 118/237 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  ++ +Y ++I GLC   K  ++  L  EM   G+ AN +   +L+ A  + G   EA 
Sbjct: 110 ICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEAT 169

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
               +M+   I   VVTF  LID L K G V+EA   F  M   G  PN+  Y +L++GL
Sbjct: 170 RTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGL 229

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  + ++ A  LF+ M +R +  D  +Y  LI+GY      +EA+ L  +M    +   +
Sbjct: 230 CLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSI 289

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             YT L+  L + G ++ A+ LF+ M   G  P       LL    + G ++EAI++
Sbjct: 290 TTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDV 346



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 106/213 (49%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           ++G   N V  +TL+      G+  +AL L D+M  S  +  ++ +  LI+ L K+   R
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            A++   RM       N   Y  +ID LCK     +   +F EM    + P+   Y++LI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +G  +    +EA+NL + M   G+  ++  Y SL+    R G  +EA   F +M+G GIL
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           PD +   +L+    ++G + EA ++   M+ +G
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQG 214



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IKA++  Y ++I   C    ++++    S+M   G+  + V  TTL+D   K G+
Sbjct: 140 MVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGK 199

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + + M+       +VT+  L++GLC    +  A+  F  M + G+  +V  Y  
Sbjct: 200 VQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNT 259

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C     E A  LF +M   ++ P  T YT L+    ++   + A  L N M   G
Sbjct: 260 LINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICG 319

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L+ YT L+ GL + G ++EA  +F  +      P   +   L+   ++    + A+
Sbjct: 320 QSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAM 379

Query: 241 ELQNEMMGRGLL 252
           E+ +E+   GL+
Sbjct: 380 EIFDEIPTVGLV 391



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 107/219 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ I  D+  + T+I  L  + K +++  +   M + G   N V   +L++      +
Sbjct: 175 MVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQ 234

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L + M++  I++ V+++  LI+G C SG   EA+  F +M    L P++  YT 
Sbjct: 235 MDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTI 294

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+  L +   I  A+ LF+ M      P    YT L+DG  K+   +EA+++   +  + 
Sbjct: 295 LLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIK 354

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
               +  Y+ L+ G+ +    + A  +F E+   G++P+
Sbjct: 355 YKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPN 393



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 86/181 (47%)

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           + S  +  +VT   L+ G+C  G V +A++ F +M   G   ++ +Y  LI+ L K    
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            RA  L   M       +   Y  +ID   K     + L +   M  +G+  ++  Y+SL
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL R G L+EA  LF EM+ +GI  + I   SL+      G   EA    ++M+G G+
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 252 L 252
           L
Sbjct: 181 L 181



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 72/152 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
            L  Y  ++ GLC     E++  +   +K      +  I + L+   F+A     A+ + 
Sbjct: 323 SLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIF 382

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DE+    +   +VT+ ++I+GLCK G + EA   F +M + G   +   +  +I G  ++
Sbjct: 383 DEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQE 442

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           N +++A      M +++  P+ +    L++ Y
Sbjct: 443 NQVQKAMEFLKRMREKNFSPNDSVTLMLVNLY 474


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 122/253 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I   +  Y T+I GL     ++D+  L   M E G+T N + C T++D +FK G+
Sbjct: 428 MLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGD 487

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  E+L      + V F  +I GLCK G + EA   F RM + GL P+   Y  
Sbjct: 488 SDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRT 547

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L DG CK   ++ A  +   M ++ M      Y +LIDG  K     +  +L   M   G
Sbjct: 548 LSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRG 607

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ G      L +A  L+ EMI RG  P+ ++C  ++   Y    + EA 
Sbjct: 608 LSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEAT 667

Query: 241 ELQNEMMGRGLLS 253
            + ++M+   +L+
Sbjct: 668 VILDKMLDFDILA 680



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++  Y  ++ G      FE  + +L  M E G++ N V CT LM  Y K G+
Sbjct: 252 MVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGK 311

Query: 61  PSEALSLLDEML-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             EA  LL E+  D  + V    + VL+DG C+ G + +A+     M   GL  N+ +  
Sbjct: 312 MDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICN 371

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LI G CK   +  A  +F  M   ++ PD  +Y  L+DGY +     +A  L   M   
Sbjct: 372 TLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGD 431

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+   +  Y +++ GL   G   +A  L+H M+ RG+ P+EI C ++L   ++ G+ D A
Sbjct: 432 GITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRA 491

Query: 240 IELQNEMMGRGL 251
           + L  E++GRG 
Sbjct: 492 MMLWKEILGRGF 503



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 6/254 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  ++  YGT+I G C E K + +  L  EM E G T N V+C+ ++ + ++   
Sbjct: 603 MQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDR 662

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA---IDYFGRMPDFGLHPNVAV 117
            SEA  +LD+MLD  I + V   C   D L K+ L  EA    D   +        N  V
Sbjct: 663 ISEATVILDKMLDFDI-LAVHNKCS--DKLVKNDLTLEAQKIADSLDKSDICNSLSNNIV 719

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y   IDGLCK   ++ AR++   +  R  +PD   Y  LI       +  EA  L++ M 
Sbjct: 720 YNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEML 779

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E G+  ++  Y +L+ GL + G++  A+ LF+++  +G++P+ +    L+  +   G++D
Sbjct: 780 EKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLD 839

Query: 238 EAIELQNEMMGRGL 251
           +A  L+ +M   G+
Sbjct: 840 KASRLREKMTEEGI 853



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 124/285 (43%), Gaps = 35/285 (12%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+        + T+I GLC   K  ++  +   MKE GL+ + +   TL D Y K G   
Sbjct: 500 GRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQ 559

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA  +   M    +  ++  +  LIDGL K   + +  D    M   GL PNV  Y  LI
Sbjct: 560 EAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLI 619

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV- 181
            G C +  +++A +L+ EM +R   P+    + ++    + +   EA  + ++M +  + 
Sbjct: 620 SGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDIL 679

Query: 182 -------------DLDLNA---------------------YTSLVWGLSRCGHLQEARVL 207
                        DL L A                     Y   + GL + G L EAR +
Sbjct: 680 AVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSV 739

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              ++ RG LPD     +L+      GN+DEA +L++EM+ +GL+
Sbjct: 740 LSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLI 784



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 119/248 (47%), Gaps = 1/248 (0%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
            D  +YG ++ G C   + ED+  +  EM   GL  N VIC TL+  Y K G+  EA  +
Sbjct: 330 VDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERV 389

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
              M+D  ++    ++  L+DG C+ G V +A      M   G+ P V  Y  +I GL  
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVD 449

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
               + A +L+  M +R + P+  +   ++D + K      A+ L   +   G      A
Sbjct: 450 VGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVA 509

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + +++ GL + G L EA  +F  M   G+ PDEI   +L   + + GN+ EA +++  +M
Sbjct: 510 FNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKG-VM 568

Query: 248 GRGLLSGS 255
            R  +S S
Sbjct: 569 ERQAMSAS 576



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 113/247 (45%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+K D   Y T++ G C E K   + +L  EM  +G+T   V   T++      G   +A
Sbjct: 397 NLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDA 456

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L L   M++  +    ++ C ++D   K G    A+  +  +   G   +   +  +I G
Sbjct: 457 LHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISG 516

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK   +  A  +FD M +  + PD   Y  L DGY K+ + +EA  +K  M    +   
Sbjct: 517 LCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSAS 576

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y SL+ GL +   L +   L  EM  RG+ P+ +   +L+    +   +D+A  L  
Sbjct: 577 IEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYF 636

Query: 245 EMMGRGL 251
           EM+ RG 
Sbjct: 637 EMIERGF 643



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 112/222 (50%), Gaps = 1/222 (0%)

Query: 31  LLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           ++  ++   G+  +  +C+ +++A+ + G    A+ +L++M+   +E  VVT+  L++G 
Sbjct: 212 MVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGY 271

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM-IPD 149
              G           M + G+  NV   T L+ G CKK  ++ A  L  E+ + ++ + D
Sbjct: 272 VGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVD 331

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  L+DGY +    ++A+ +++ M  VG+ +++    +L+ G  + G + EA  +F 
Sbjct: 332 ERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFV 391

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            M+   + PD     +LL  +   G + +A  L  EM+G G+
Sbjct: 392 GMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGI 433



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 6/258 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + + A + +Y ++I GL    K  D   LL EM+  GL+ N V   TL+  +    +
Sbjct: 568 MERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQK 627

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  EM++      VV    ++  L +   + EA     +M DF +   +AV+  
Sbjct: 628 LDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI---LAVHNK 684

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDM---IPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
             D L K +    A+ + D + K D+   + +   Y   IDG  K     EA ++ + + 
Sbjct: 685 CSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLM 744

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
             G   D   Y +L+   S  G++ EA  L  EM+ +G++P+  +  +L+    + GN+D
Sbjct: 745 SRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNID 804

Query: 238 EAIELQNEMMGRGLLSGS 255
            A  L  ++  +GL+  +
Sbjct: 805 RAQRLFYKLYQKGLVPNA 822



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 77/165 (46%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
            F +L+    + G+ + A+  F  M   G  P +   + L+  L +K     A  +FD++
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
               ++PD    + +++ + +      A+ +  +M + G++ ++  Y  LV G    G  
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDF 277

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +    +   M  RG+  + + C  L++ + ++G MDEA +L  E+
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREV 322



 Score = 45.8 bits (107), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 54/100 (54%)

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +  L+  + +    K AL + + M+ +G    L + + L+  L + G  + A ++F ++
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +G GI+PD  +C  ++  H + G +D A+E+  +M+  GL
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGL 257


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++    K ++  Y  +I G C E K   +++LLS M+E GL  NT   TTL+D + K G 
Sbjct: 356 VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGN 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+D M        + T+  +IDGLCK G + EA     ++   GL  +   YT 
Sbjct: 416 FVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTI 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C++    R+   F++M K    PD  +YT LI  + + +  KE+  L      +G
Sbjct: 476 LMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLG 535

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTS++ G  R G+   A  LF  M   G  PD I   +L+    +   +D+A 
Sbjct: 536 LIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDAR 595

Query: 241 ELQNEMMGRGL 251
            L + MM +GL
Sbjct: 596 NLYDAMMDKGL 606



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 128/252 (50%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   +  ++   C   +  +++  L+ M E G   +   CT ++DA+ + G 
Sbjct: 215 MCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGY 274

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +  +    +M++  +   V+ F  LI+GLCK G +++A +    M   G  PNV  +T 
Sbjct: 275 VNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334

Query: 121 LIDGLCKKNCIERARNLFDEMPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LIDGLCKK   E+A  LF ++ + D   P+   YTA+I+GY K +    A  L +RM E 
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  + N YT+L+ G  + G+   A  L   M   G  P+     +++    ++G++DEA
Sbjct: 395 GLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA 454

Query: 240 IELQNEMMGRGL 251
             L N++   GL
Sbjct: 455 YRLLNKVSVHGL 466



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M  +  K ++  + T+I GLC +   E + +L L  ++ +G   N    T +++ Y K  
Sbjct: 320 MVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED 379

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           + + A  LL  M +  +     T+  LIDG CK G    A +    M   G  PN+  Y 
Sbjct: 380 KLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYN 439

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+IDGLCKK  ++ A  L +++    +  D   YT L+  + +      +L   N+M +V
Sbjct: 440 AIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKV 499

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+++YT+L+    R   ++E+  LF E +  G++P +    S++  +   GN   A
Sbjct: 500 GFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLA 559

Query: 240 IELQNEMMGRG 250
           ++L   M   G
Sbjct: 560 VKLFQRMSNHG 570



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 111/245 (45%), Gaps = 1/245 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC +   + +  LL EM   G   N    TTL+D   K G   +A  L  +++
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLV 356

Query: 73  DSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            S   +  V T+  +I+G CK   +  A     RM + GL PN   YT LIDG CK    
Sbjct: 357 RSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNF 416

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            RA  L D M K    P+   Y A+IDG  K  S  EA  L N+++  G+  D   YT L
Sbjct: 417 VRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    R      + V F++M+  G  PD     +L+     +  M E+  L  E +  GL
Sbjct: 477 MSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGL 536

Query: 252 LSGSK 256
           +   K
Sbjct: 537 IPTKK 541



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 115/226 (50%), Gaps = 1/226 (0%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E ++ +  EM + G++ + V    ++ A    G   EA   L+ M++    V   T  ++
Sbjct: 206 EIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLI 265

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           ID  C+ G V   + YF +M + GL PNV  +TALI+GLCK+  I++A  L +EM +R  
Sbjct: 266 IDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGW 325

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEV-GVDLDLNAYTSLVWGLSRCGHLQEAR 205
            P+   +T LIDG  K    ++A  L  ++    G   +++ YT+++ G  +   L  A 
Sbjct: 326 KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAE 385

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L   M  +G++P+     +L+  H + GN   A EL + M   G 
Sbjct: 386 MLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGF 431



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 3/241 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++AD   Y  ++   C ++    S +  ++M + G T +    TTL+  + +  +  E+ 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESE 525

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +E +   +  T  T+  +I G C+ G    A+  F RM + G  P+   Y ALI GL
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGL 585

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK++ ++ ARNL+D M  + + P       L   Y K +    A+N+ +R+ +      +
Sbjct: 586 CKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTV 645

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
           N   +LV  L   G L  A + FH+++ +    + +  +  + K YE        EL   
Sbjct: 646 N---TLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVSELSER 702

Query: 246 M 246
           +
Sbjct: 703 I 703



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 1/232 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +++  ++ EM+  GL  +T     ++D     G    A ++  EM    +    V+F 
Sbjct: 169 KLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFK 228

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +++   C  G V EA  +   M + G   + A  T +ID  C+K  + R    F +M + 
Sbjct: 229 LMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEM 288

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + P+   +TALI+G  K  S K+A  L   M   G   ++  +T+L+ GL + G  ++A
Sbjct: 289 GLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348

Query: 205 RVLFHEMI-GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             LF +++   G  P+     +++  + +   ++ A  L + M  +GL+  +
Sbjct: 349 FRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     +   YG ++  LC   +FE+++ +   M   G + N    + L+    +  +
Sbjct: 43  MLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+EM+D   +  VVT+  L+ GLCK G ++EA+D F RM   G  P+  VY  
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  KK  +  A  LF+EM ++  IP    Y +L+ G+ +   F    +L   M   G
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  + +L+ G  + G + EA  LF EM   G  PD +   +L++    +G   EA 
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282

Query: 241 ELQNEMMGRGL 251
            L  EM+  G+
Sbjct: 283 RLLREMIRSGV 293



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    ++  Y  +I GLC   K +++  LL+EM + G   N V   +L+    K G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L   M+        V + VLIDG  K G + EA   F  M + G  P V  Y +
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G  +K    R ++LF +M ++  +P+   +  L+DG+ K     EA  L   M  +G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ +Y +L+ G+   G   EA+ L  EMI  G+ PD +    L+  + + G +D AI
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 241 ELQNEMMGRGL 251
           +L  E+   GL
Sbjct: 318 KLFYEIPKSGL 328



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 35/276 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  YG+++ GLC   K +++  L S M   G   + V+   L+D + K G+  EA  
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178

Query: 67  LLDEMLDSRIEVTVVTF---------------------------CV--------LIDGLC 91
           L +EML+     TV T+                           CV        L+DG C
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G + EA   F  M   G  P+V  Y  L+ G+C K     A+ L  EM +  + PD  
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +Y  LIDGY K  +   A+ L   + + G++ D  +Y++++  L R G +  A V+F +M
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           I  G  PD  + I L+        + E+ EL   M+
Sbjct: 359 IANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 100/217 (46%)

Query: 34  SEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS 93
           ++M   G   NT     L+ +  +A    EA S+   M        V ++ +LI GLC+ 
Sbjct: 41  NDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRG 100

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
             V EA +    M D G  PNV  Y +L+ GLCK   ++ A +LF  M  R   PD   Y
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             LIDG+ K     EA  L   M E G    +  Y SL+ G SR G     + LF +M+ 
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +G +P+     +LL    + G+M EA  L  EM   G
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 94/207 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++ G C      ++  L  EM+  G   + V   TLM      G+P EA  LL EM+
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMI 289

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S +   +V++ +LIDG  KSG +  AI  F  +P  GL P+   Y+ +ID LC+   + 
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVG 349

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F +M      PD      L+ G  + E   E+  L   M +      +  Y  L+
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
           + L +     +   +FHE+  RG  PD
Sbjct: 410 YKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 91/200 (45%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L++   K+G         ++ML +       T+  L+  LC++    EA   F  M   G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PNV  Y+ LI GLC+   ++ A  L +EM      P+   Y +L+ G  K    KEA+
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           +L +RM   G   D   Y  L+ G S+ G + EA  LF EM+ +G +P      SLL   
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 231 YERGNMDEAIELQNEMMGRG 250
             +G       L  +M+ +G
Sbjct: 203 SRKGEFGRVQSLFKDMLRQG 222



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 86/173 (49%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
            +++  L++ L KSG        +  M   G  PN   Y  L+  LC+    E AR++F 
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
            M  +   P+  +Y+ LI G  + +   EA  L N M + G   ++  Y SL+ GL + G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L+EA  LF  M+ RG  PD ++   L+    ++G+M EA  L  EM+ +G +
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 92/197 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      D+  Y T++ G+C + K  +++ LL EM  +G+  + V    L+D Y K+G 
Sbjct: 253 MRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  E+  S +E    ++  +ID LC++G V  A   F  M   G  P+ AV   
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+   +  +  LF  M K + +P    Y  L+    K +   +   + + +TE G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 181 VDLDLNAYTSLVWGLSR 197
              D+     ++  L R
Sbjct: 433 FSPDVEISKVILETLRR 449



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 1/164 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y  +I G       + +  L  E+ ++GL  +    +T++D   +AG+   A 
Sbjct: 293 VGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF 352

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M+ +           L+ GLC+   + E+ + F  M  F   P +  Y  L+  L
Sbjct: 353 VVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKL 412

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           CK    +    +F E+ +R   PD      +++  L+    KEA
Sbjct: 413 CKAKRSDDVCEIFHELTERGFSPDVEISKVILET-LRRSDDKEA 455


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 127/249 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GL + +K  ++  L+  M + G   N V    +++   K G+   A +
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL++M  ++IE  VV +  +ID LCK     +A++ F  M + G+ PNV  Y++LI  LC
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L  +M +R + P+   + ALID ++K     EA  L + M +  +D D+ 
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ G      L EA+ +F  MI +   P+ +   +L+    +   +DE +EL  EM
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426

Query: 247 MGRGLLSGS 255
             RGL+  +
Sbjct: 427 SQRGLVGNT 435



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 108/208 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K ++ ++  Y ++I  LC   ++ D+  LLS+M E  +  N V    L+DA+ K G+
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEM+   I+  + T+  LI+G C    + EA   F  M      PNV  Y  
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   I+    LF EM +R ++ +T  YT LI G+ +      A  +  +M   G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  ++  Y +L+ GL + G L++A V+F
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVF 493



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 128/240 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+A++ +Y T+I  LC     +D+  L +EM+  G+  N +  ++L+        
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL +M++ +I   VVTF  LID   K G + EA   +  M    + P++  Y++
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C  + ++ A+++F+ M  +D  P+   Y  LI+G+ K +   E + L   M++ G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+L+ G  +      A+++F +M+  G+ P+ +   +LL    + G +++A+
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + +L  YG ++ GLC     + +  LL++M+   + AN VI +T++D+  K   
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  EM +  +   V+T+  LI  LC      +A      M +  ++PNV  + A
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+  +  A  L+DEM KR + PD   Y++LI+G+  H+   EA ++   M    
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y +L+ G  +   + E   LF EM  RG++ + +   +L+   ++  + D A 
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455

Query: 241 ELQNEMMGRGL 251
            +  +M+  G+
Sbjct: 456 MVFKQMVSDGV 466



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  +L  Y  +I   C  S+   +  LL +M + G   + V  ++L++ Y     
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A++L+D+M++       +TF  LI GL       EA+    RM   G  PN+  Y  
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK+  I+ A NL ++M    +  +   Y+ +ID   K+    +ALNL   M   G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y+SL+  L       +A  L  +MI R I P+ +   +L+    + G + EA 
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350

Query: 241 ELQNEMMGRGL 251
           +L +EM+ R +
Sbjct: 351 KLYDEMIKRSI 361



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 106/220 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  D+  Y ++I G C+  + +++K +   M       N V   TL++ + KA  
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L  EM    +    VT+  LI G  ++     A   F +M   G+HPN+  Y  
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +E+A  +F+ + +  M P    Y  +I+G  K    ++  +L   ++  G
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           V  D+  Y +++ G  R G  +EA  LF +M   G LPD 
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 19/257 (7%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLS---------------EMKENGLTANTVICTTLMDAYF 56
           L+G ++    + S FE +KLL +               +M+  G++ N      L++ + 
Sbjct: 72  LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           +  + S AL+LL +M+    E ++VT   L++G C    + +A+    +M + G  P+  
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +T LI GL   N    A  L D M +R   P+   Y  +++G  K      A NL N+M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK--KHYERG 234
               ++ ++  Y++++  L +  H  +A  LF EM  +G+ P+ I   SL+    +YER 
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER- 310

Query: 235 NMDEAIELQNEMMGRGL 251
              +A  L ++M+ R +
Sbjct: 311 -WSDASRLLSDMIERKI 326



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 86/184 (46%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ L   M+ SR   ++  F  L+  + K       I    +M   G+  N+  Y  LI
Sbjct: 68  DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C+++ I  A  L  +M K    P     ++L++GY   +   +A+ L ++M E+G  
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   +T+L+ GL       EA  L   M+ RG  P+ +    ++    +RG++D A  L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247

Query: 243 QNEM 246
            N+M
Sbjct: 248 LNKM 251



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 68/153 (44%)

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +AI  FG M      P++  +  L+  + K    +   +L ++M +  +  +   Y  LI
Sbjct: 68  DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           + + +      AL L  +M ++G +  +   +SL+ G      + +A  L  +M+  G  
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           PD I   +L+   +      EA+ L + M+ RG
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 122/251 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           ++++  +  + T+I G+C     +    L  EM + G+  +      L+  + + G    
Sbjct: 214 RSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMEN 273

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ + +EM D+ +    V F  LID  CK G V   +D +  M   G+ P++  Y AL++
Sbjct: 274 AVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVN 333

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC+   ++ A ++ +EM    + PD   YT LIDG  K      A+++K +M E  V L
Sbjct: 334 GLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSL 393

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D   YT+L+ GLS+ G   +A  +  EM+   + PD      ++     +G++    +L 
Sbjct: 394 DEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLL 453

Query: 244 NEMMGRGLLSG 254
            EM  +G   G
Sbjct: 454 KEMQNKGKKPG 464



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 127/279 (45%), Gaps = 35/279 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K D+  YG +I G C   + E++  + +EM++ G+  N V+ TTL+DA+ K G 
Sbjct: 246 MSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGN 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +  + L  +M    +   +V +  L++GLC++  ++ A      M + GL P+   YT 
Sbjct: 306 VNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTT 365

Query: 121 LIDGLCKKNCIERARNLFDEMPK------------------------------RDMI--- 147
           LIDG CK   ++ A ++  +M +                              R+M+   
Sbjct: 366 LIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAA 425

Query: 148 --PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             PD T YT +ID + +    K    L   M   G    +  Y  ++ GL + G ++ A 
Sbjct: 426 LEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNAD 485

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +L H M+  G+ PD+I    LL    + G +  + EL++
Sbjct: 486 MLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELES 524



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 80/155 (51%), Gaps = 1/155 (0%)

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           EA  ++ ++ D G+ P   ++  L+    +   +  AR +FDEM +R + P    +  LI
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEM-RRSVQPTVVTFNTLI 227

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G  +         L   M++VGV  D+  Y +L+ G  R G ++ A  +F+EM   G+ 
Sbjct: 228 SGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVN 287

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           P+ ++  +L+  H + GN++  ++L  +M  RG++
Sbjct: 288 PNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVM 322



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 3/167 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D   Y  +I GL    +  D++ +L EM E  L  +    T ++DA+ + G+
Sbjct: 386 MAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGD 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 LL EM +   +  VVT+ V+++GLCK G ++ A      M + G+ P+   Y  
Sbjct: 446 VKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNI 505

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           L+DG CK   +  +  L      + M+PD   YT+LI    K +  K
Sbjct: 506 LLDGQCKHGKVANSEELESS---KGMVPDFAVYTSLISELAKKKPAK 549


>gi|341605743|gb|AEK82974.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605753|gb|AEK82979.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605831|gb|AEK83018.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1188

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 132/254 (51%), Gaps = 1/254 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I  +L  + ++++G C E K  ++K +L +MKE GL  + V+ T L+  Y  AG+ ++
Sbjct: 233 EKIPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMAD 292

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKS-GLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           A  LL++M     E     + VLI  LC++   + EA+  F  M  +G   ++  YTALI
Sbjct: 293 AYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALI 352

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G CK   I++  ++ D+M K+ ++P    Y  ++  + K E F+E L L  +M ++G  
Sbjct: 353 SGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCH 412

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            DL  Y  ++        ++EA  L++EM   G+ P   + + ++     +G + EA   
Sbjct: 413 PDLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSH 472

Query: 243 QNEMMGRGLLSGSK 256
             EM+ RG+ S  +
Sbjct: 473 FKEMVSRGIFSAPQ 486



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 109/220 (49%), Gaps = 2/220 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L EM + G   +  +   L+DA  K G   +A  + ++M + +I   +  F  L+ G C
Sbjct: 192 VLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMRE-KIPPNLRYFTSLLYGWC 250

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G + EA +   +M + GL P++ V+T L+ G      +  A +L ++M KR   P+  
Sbjct: 251 REGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNAN 310

Query: 152 AYTALIDGYLKHES-FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            YT LI    + E    EA+ +   M   G + D+  YT+L+ G  + G + +   +  +
Sbjct: 311 CYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDD 370

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           M  +G++P ++  + +L  H ++   +E +EL  +M   G
Sbjct: 371 MRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIG 410



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 7/225 (3%)

Query: 30  KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIE-VTVVTFCVLID 88
           +  L   K+ G   +  +C +++    K  +      L++EM     E +    F VLI 
Sbjct: 119 RFFLWATKQPGYCHSYEVCKSMVKILSKMRQFGAVWGLIEEMRKENPELIEPELFVVLIR 178

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
               + +V++A++    MP +G  P+  V+  L+D LCK   ++ A  +F++M  R+ IP
Sbjct: 179 RFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDM--REKIP 236

Query: 149 DTTAY-TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
               Y T+L+ G+ +     EA  +  +M E G++ D+  +T+L+ G +  G + +A  L
Sbjct: 237 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 296

Query: 208 FHEMIGRGILPDEILCISLLKKHYER--GNMDEAIELQNEMMGRG 250
            ++M  RG  P+   C ++L +   R    MDEA+ +  EM   G
Sbjct: 297 LNDMRKRGYEPN-ANCYTVLIQALCRTEKRMDEAMRVFVEMERYG 340



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 114/247 (46%), Gaps = 8/247 (3%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +AD+  Y  +I G C     +    +L +M++ G+  + V    ++ A+ K  +  E L 
Sbjct: 342 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLE 401

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L+++M        ++ + V+I   C    V+EA+  +  M   GL P   ++  +I+G  
Sbjct: 402 LIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFT 461

Query: 127 KKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFKEALN----LKNRMTEVG 180
            +  +  A + F EM  R +   P      +L++  L+ +  + A +    + N+ +   
Sbjct: 462 SQGYLIEACSHFKEMVSRGIFSAPQYGTLKSLLNTLLRDDKLEMAKDVWSCISNKTS--S 519

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +L+++A+T  +  L   GH++EA     +M+   ++P     + L+K   +  N   A 
Sbjct: 520 CELNVSAWTIWIHALFAKGHVKEACSYCLDMMEMDLMPQPNTYVKLMKGLNKLYNRTIAA 579

Query: 241 ELQNEMM 247
           E+  ++M
Sbjct: 580 EITEKVM 586


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 120/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG ++  LC   +FE+++ +   M   G + N    + L+    +  +  EA  LL+EM+
Sbjct: 55  YGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI 114

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D   +  VVT+  L+ GLCK G ++EA+D F RM   G  P+  VY  LIDG  KK  + 
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMG 174

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM ++  IP    Y +L+ G+ +   F    +L   M   G   ++  + +L+
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLL 234

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G + EA  LF EM   G  PD +   +L++    +G   EA  L  EM+  G+
Sbjct: 235 DGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGV 293



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    ++  Y  +I GLC   K +++  LL+EM + G   N V   +L+    K G+
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L   M+        V + VLIDG  K G + EA   F  M + G  P V  Y +
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G  +K    R ++LF +M ++  +P+   +  L+DG+ K     EA  L   M  +G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ +Y +L+ G+   G   EA+ L  EMI  G+ PD +    L+  + + G +D AI
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 241 ELQNEMMGRGL 251
           +L  E+   GL
Sbjct: 318 KLFYEIPKSGL 328



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 124/276 (44%), Gaps = 35/276 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  YG+++ GLC   K +++  L S M   G   + V+   L+D + K G+  EA  
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178

Query: 67  LLDEMLDSRIEVTVVTF---------------------------CV--------LIDGLC 91
           L +EML+     TV T+                           CV        L+DG C
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G + EA   F  M   G  P+V  Y  LI G+C K     A+ L  EM +  + PD  
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +Y  LIDGY K  +   A+ L   + + G++ D  +Y++++  L R G +  A V+F +M
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           I  G  PD  + I L+        + E+ EL   M+
Sbjct: 359 IANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 100/217 (46%)

Query: 34  SEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS 93
           ++M   G   NT     L+ +  +A    EA S+   M        V ++ +LI GLC+ 
Sbjct: 41  NDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRG 100

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
             V EA +    M D G  PNV  Y +L+ GLCK   ++ A +LF  M  R   PD   Y
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             LIDG+ K     EA  L   M E G    +  Y SL+ G SR G     + LF +M+ 
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +G +P+     +LL    + G+M EA  L  EM   G
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 94/207 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++ G C      ++  L  EM+  G   + V   TL+      G+P EA  LL EM+
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMI 289

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S +   +V++ +LIDG  KSG +  AI  F  +P  GL P+   Y+ +ID LC+   + 
Sbjct: 290 RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVG 349

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F +M      PD      L+ G  + E   E+  L   M +      +  Y  L+
Sbjct: 350 AAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLM 409

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
           + L +     +   +FHE+  RG  PD
Sbjct: 410 YKLCKAKRSDDVCEIFHELTERGFSPD 436



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 91/200 (45%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L++   K+G         ++ML +       T+  L+  LC++    EA   F  M   G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PNV  Y+ LI GLC+   ++ A  L +EM      P+   Y +L+ G  K    KEA+
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           +L +RM   G   D   Y  L+ G S+ G + EA  LF EM+ +G +P      SLL   
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 231 YERGNMDEAIELQNEMMGRG 250
             +G       L  +M+ +G
Sbjct: 203 SRKGEFGRVQSLFKDMLRQG 222



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 86/173 (49%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
            +++  L++ L KSG        +  M   G  PN   Y  L+  LC+    E AR++F 
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
            M  +   P+  +Y+ LI G  + +   EA  L N M + G   ++  Y SL+ GL + G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L+EA  LF  M+ RG  PD ++   L+    ++G+M EA  L  EM+ +G +
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 92/197 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      D+  Y T+I G+C + K  +++ LL EM  +G+  + V    L+D Y K+G 
Sbjct: 253 MRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGA 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  E+  S +E    ++  +ID LC++G V  A   F  M   G  P+ AV   
Sbjct: 313 LDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+   +  +  LF  M K + +P    Y  L+    K +   +   + + +TE G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432

Query: 181 VDLDLNAYTSLVWGLSR 197
              D+     ++  L R
Sbjct: 433 FSPDVEISKVILETLRR 449


>gi|341605699|gb|AEK82952.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/196 (37%), Positives = 103/196 (52%), Gaps = 1/196 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGXAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGL 195
           G D  +  YT L+ G+
Sbjct: 188 GCDQTVYTYTILISGM 203



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGXAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGXAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 183



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGXAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 129/245 (52%), Gaps = 3/245 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  +  +I GLC E + +++++LLS M+  G + N +   TL+    +AG+
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS---GLVREAIDYFGRMPDFGLHPNVAV 117
             +A++   EML   ++ TVVT+ +L+DGLCK+   G ++EAI  F  M + G  P+V  
Sbjct: 414 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 473

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y+ALIDGL K   ++ AR L   M  +  IP+   Y +LI G    +   EAL L   M 
Sbjct: 474 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMV 533

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E G   D   Y +++  L +   + +A  LF   +  G++P   +  SL+        +D
Sbjct: 534 EKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVD 593

Query: 238 EAIEL 242
           EA++L
Sbjct: 594 EALKL 598



 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 4/251 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIE-SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           K    ++  Y T+I GLC E  + E ++ LL +M  NG   + V    L+    +    S
Sbjct: 216 KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVS 275

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL L   +L    E  V T+ +LIDGL K   V EA + F  +   GL P+   YT  I
Sbjct: 276 EALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI 335

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK   +E A  +  +M ++  +PD  ++ A+I+G  K +   EA  L + M   G  
Sbjct: 336 DGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI---LCISLLKKHYERGNMDEA 239
            +  ++ +L+ G  R G  ++A   F EM+ RG+ P  +   + +  L K  + G + EA
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455

Query: 240 IELQNEMMGRG 250
           I L + M+ +G
Sbjct: 456 ITLFDAMIEKG 466



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 3/253 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D   Y   I GLC   + ED+ L+L +M E G   + V    +++   K     EA 
Sbjct: 324 LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE 383

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL  M         ++F  LI G C++G  ++A+  F  M   G+ P V  Y  L+DGL
Sbjct: 384 VLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 443

Query: 126 CK---KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           CK   +  I+ A  LFD M ++  +PD   Y+ALIDG  K     +A  L   M   G  
Sbjct: 444 CKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCI 503

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y SL+ GL     + EA  LF  M+ +G +PD I   +++    ++  +D+A+ L
Sbjct: 504 PNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALAL 563

Query: 243 QNEMMGRGLLSGS 255
            +  +  G++  S
Sbjct: 564 FDGSLEAGVVPTS 576



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 119/243 (48%), Gaps = 4/243 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +   I GLC  S+  D++ +   M+++G   N +    L+      G  S+A +L 
Sbjct: 49  DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M+ +     VVT+  L+ G CK G + EA+  F      G  P+V  Y ALI+G CK 
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A+ +   M    ++PD   Y +L++G  K+    EA  L   + + G   ++  Y
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITY 225

Query: 189 TSLVWGLSR-CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           ++L+ GL R    L+ AR L  +M+  G  PD +   +L+        + EA++L   ++
Sbjct: 226 STLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL 285

Query: 248 GRG 250
            +G
Sbjct: 286 RQG 288



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 4/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +++  D+  Y +++ GLC   + +++++L+ +    G + N +  +TL+    +   
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELR 237

Query: 61  PSE-ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             E A  LL++M+ +  +  +V++  LI GL +   V EA+  FG +   G  P V  Y 
Sbjct: 238 RLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYN 297

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LIDGL K++ +  A  LF  + K  + PD   YT  IDG  K    ++AL +   M E 
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+ ++ +++ GL +   + EA VL   M  +G  P+ I   +L+      G   +A
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKA 417

Query: 240 IELQNEMMGRGL 251
           +    EM+ RG+
Sbjct: 418 MTTFKEMLKRGV 429



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 1/171 (0%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           T  +L+  L KSG + +A  +  ++   GL  +++ +   I GLC+ + I  A+ +FD M
Sbjct: 18  TVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTVFDGM 76

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            K    P+   Y AL+ G        +A  L  RM + G   D+  Y +L+ G  + G L
Sbjct: 77  RKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKL 136

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            EA  +F   + RG +PD +   +L+    +   +DEA  +   M+   L+
Sbjct: 137 DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLV 187


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 125/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+AD+ ++ TII  LC     +D+  L  EM+  G+  N V  ++L+      G 
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL +M++ +I   +VTF  LID   K G   EA      M    + P++  Y +
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C  + +++A+ +F+ M  +D  PD   Y  LI G+ K +  ++   L   M+  G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT+L+ GL   G    A+ +F +M+  G+ PD +    LL      G +++A+
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415

Query: 241 ELQNEM 246
           E+ + M
Sbjct: 416 EVFDYM 421



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 125/246 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GL + +K  ++  L+  M + G   N V    +++   K G+   A +
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL++M  ++IE  VV F  +ID LCK   V +A++ F  M   G+ PNV  Y++LI  LC
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L  +M ++ + P+   + ALID ++K   F EA  L + M +  +D D+ 
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y SL+ G      L +A+ +F  M+ +   PD     +L+K   +   +++  EL  EM
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351

Query: 247 MGRGLL 252
             RGL+
Sbjct: 352 SHRGLV 357



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + +L  YG ++ GLC     + +  LL++M+   + A+ VI  T++D+  K   
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  EM    I   VVT+  LI  LC  G   +A      M +  ++PN+  + A
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+     A  L D+M KR + PD   Y +LI+G+  H+   +A  +   M    
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL+ Y +L+ G  +   +++   LF EM  RG++ D +   +L++  +  G+ D A 
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380

Query: 241 ELQNEMMGRGL 251
           ++  +M+  G+
Sbjct: 381 KVFKQMVSDGV 391



 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 117/242 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ ++  Y ++I  LC   ++ D+  LLS+M E  +  N V    L+DA+ K G+
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D+M+   I+  + T+  LI+G C    + +A   F  M      P++  Y  
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E    LF EM  R ++ DT  YT LI G         A  +  +M   G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y+ L+ GL   G L++A  +F  M    I  D  +  ++++   + G +D+  
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450

Query: 241 EL 242
           +L
Sbjct: 451 DL 452



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  +L  Y  +I   C  S+   +  LL +M + G   + V  ++L++ Y     
Sbjct: 36  MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A++L+D+M++       +TF  LI GL       EA+    RM   G  PN+  Y  
Sbjct: 96  ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK+  I+ A NL ++M    +  D   +  +ID   K+    +ALNL   M   G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y+SL+  L   G   +A  L  +MI + I P+ +   +L+    + G   EA 
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275

Query: 241 ELQNEMMGRGL 251
           +L ++M+ R +
Sbjct: 276 KLHDDMIKRSI 286



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 101/211 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   DL  Y T+I G C   + ED   L  EM   GL  +TV  TTL+   F  G+
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+   +   ++T+ +L+DGLC +G + +A++ F  M    +  ++ +YT 
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   ++   +LF  +  + + P+   Y  +I G       +EA  L  +M E G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
              D   Y +L+    R G    +  L  EM
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 113/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  D+  Y ++I G C+  + + +K +   M       +     TL+  + K+  
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L  EM    +    VT+  LI GL   G    A   F +M   G+ P++  Y+ 
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +E+A  +FD M K ++  D   YT +I+G  K     +  +L   ++  G
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y +++ GL     LQEA  L  +M   G LPD     +L++ H   G+   + 
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 520

Query: 241 ELQNEM 246
           EL  EM
Sbjct: 521 ELIREM 526



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 115/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  +    KF+    L  +M+  G++ N      L++ + +  + S AL+LL +M+
Sbjct: 13  FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E ++VT   L++G C    + +A+    +M + G  P+   +T LI GL   N   
Sbjct: 73  KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L D M +R   P+   Y  +++G  K      A NL N+M    ++ D+  + +++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L +  H+ +A  LF EM  +GI P+ +   SL+      G   +A +L ++M+ + +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 82/176 (46%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M+ SR   ++  F  L+  + K       I    +M   G+  N+  Y  LI+  C+++ 
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           I  A  L  +M K    P     ++L++GY   +   +A+ L ++M E+G   D   +T+
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L+ GL       EA  L   M+ RG  P+ +    ++    +RG++D A  L N+M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 62/138 (44%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P++  +  L+  + K    +   +L ++M +  +  +   Y  LI+ + +      AL L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
             +M ++G +  +   +SL+ G      + +A  L  +M+  G  PD I   +L+   + 
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 233 RGNMDEAIELQNEMMGRG 250
                EA+ L + M+ RG
Sbjct: 128 HNKASEAVALVDRMVQRG 145



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 41/73 (56%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K ++  Y T+I GLC +   +++  LL +MKE+G   ++    TL+ A+ + G+ + 
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518

Query: 64  ALSLLDEMLDSRI 76
           +  L+ EM   R 
Sbjct: 519 SAELIREMRSCRF 531


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 118/266 (44%), Gaps = 35/266 (13%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  LC + K E     LSE++E G+  + V   TL+ AY   G   EA  L+  M    
Sbjct: 231 MVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKG 290

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
               V T+  +I+GLCK G    A + F  M   GL P+   Y +L+   CKK       
Sbjct: 291 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETE 350

Query: 136 NLFDEMPKRD-----------------------------------MIPDTTAYTALIDGY 160
           N+F +M  RD                                   +IPD   YT LI GY
Sbjct: 351 NIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 410

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            +     EA+NL+N M + G  +D+  Y +++ GL +   L EA  LF+EM  RG+ PD 
Sbjct: 411 CRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDS 470

Query: 221 ILCISLLKKHYERGNMDEAIELQNEM 246
                L+  H + GN+  A+EL  +M
Sbjct: 471 YTLTILIDGHCKLGNLQNAMELFKKM 496



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 138/286 (48%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANT--------------- 45
           M  K     +  Y T+I GLC   K+E +K + +EM  +GL+ ++               
Sbjct: 286 MPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 345

Query: 46  -------------------VIC-TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                              ++C +++M  + ++G   +AL   + + ++ +    V + +
Sbjct: 346 AVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 405

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G C+ G++ EA++    M   G   +V  Y  ++ GLCK+  +  A  LF+EM +R 
Sbjct: 406 LIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERG 465

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD+   T LIDG+ K  + + A+ L  +M E  + LD+  Y +L+ G  + G +  A+
Sbjct: 466 LFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAK 525

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++ +M+ + ILP  I    L+     +G++ EA  + +EM+ + +
Sbjct: 526 EIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSI 571



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 122/280 (43%), Gaps = 37/280 (13%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y TI+ GLC      ++  L +EM E GL  ++   T L+D + K G    A+ L 
Sbjct: 434 DVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELF 493

Query: 69  DEMLDSRIEVTVVT-----------------------------------FCVLIDGLCKS 93
            +M + RI++ VVT                                   F +L++ LC  
Sbjct: 494 KKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSK 553

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G + EA   +  M    + P V +  ++I G C+           ++M     +PD  +Y
Sbjct: 554 GHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISY 613

Query: 154 TALIDGYLKHESFKEALNLKNRMTEV--GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             LI G++K E+  +A  L  +M E   G+  D+  Y S++ G  R   ++EA  +  +M
Sbjct: 614 NTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKM 673

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I RG+ PD     SL+     + N+ EA    +EM+ RG 
Sbjct: 674 IERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGF 713



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 114/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  E+  +G+  N      +++A  K G+  +  + L E+ +  +   +VT+  LI    
Sbjct: 212 IYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYS 271

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             GL+ EA +    MP  G  P V  Y  +I+GLCK    ERA+ +F EM +  + PD+T
Sbjct: 272 SQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 331

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y +L+    K     E  N+ + M    V  DL  ++S++   +R G+L +A + F+ +
Sbjct: 332 TYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 391

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              G++PD ++   L++ +  +G + EA+ L+NEM+ +G
Sbjct: 392 KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQG 430



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 2/222 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K IK D+  Y T++ G       + +K + ++M    +    +  + L++A    G 
Sbjct: 496 MKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGH 555

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  + DEM+   I+ TV+    +I G C+SG   +   +  +M   G  P+   Y  
Sbjct: 556 LSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNT 615

Query: 121 LIDGLCKKNCIERARNLFDEMPKRD--MIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           LI G  K+  + +A  L  +M ++   ++PD   Y +++ G+ +    KEA  +  +M E
Sbjct: 616 LIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIE 675

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            GV+ D + YTSL+ G     +L EA     EM+ RG  PD+
Sbjct: 676 RGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 124/281 (44%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +++  DL  + +++         + + +  + +KE GL  + VI T L+  Y + G 
Sbjct: 356 MRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTF-----------------------------------CV 85
            SEA++L +EML     + VVT+                                    +
Sbjct: 416 ISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTI 475

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LIDG CK G ++ A++ F +M +  +  +V  Y  L+DG  K   I+ A+ ++ +M  ++
Sbjct: 476 LIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P   +++ L++         EA  + + M    +   +    S++ G  R G+  +  
Sbjct: 536 ILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGE 595

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +   +MI  G +PD I   +L+    +  NM +A  L  +M
Sbjct: 596 IFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKM 636



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 92/210 (43%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +N  +   L+  + +A +  EA      +      V++     LI  L + G V  A   
Sbjct: 153 SNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRI 212

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  +   G+  NV     +++ LCK   +E+      E+ ++ + PD   Y  LI  Y  
Sbjct: 213 YQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSS 272

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               +EA  L + M   G    +  Y +++ GL + G  + A+ +F EM+  G+ PD   
Sbjct: 273 QGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 332

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             SLL +  ++G+  E   + ++M  R ++
Sbjct: 333 YRSLLMEACKKGDAVETENIFSDMRSRDVV 362



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 61/141 (43%)

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           N +V+  LI    +   +  A   F  +  +       A  ALI   ++    + A  + 
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
             ++  GV +++     +V  L + G +++      E+  +G+ PD +   +L+  +  +
Sbjct: 214 QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273

Query: 234 GNMDEAIELQNEMMGRGLLSG 254
           G M+EA EL + M  +G   G
Sbjct: 274 GLMEEAFELMHAMPSKGFSPG 294


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  127 bits (319), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 1/230 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC+E + +++  L  +MK++         T L+ A   +   SEAL+L+ EM 
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME 350

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I+  + T+ VLID LC    + +A +  G+M + GL PNV  Y ALI+G CK+  IE
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A ++ + M  R++ P+T  Y  LI GY K    K A+ + N+M E  V  D+  Y SL+
Sbjct: 411 DALDVVELMESRNLRPNTRTYNELIKGYCKRNVHK-AMGVLNKMLERKVLPDVVTYNSLI 469

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            G  R G+   A  L   M  RG++PD     S++    +   ++EA +L
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDL 519



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 136/288 (47%), Gaps = 42/288 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG- 59
           M+ K IK ++  Y  +I  LC + K E ++ LL +M E GL  N +    L++ Y K G 
Sbjct: 349 MEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408

Query: 60  ----------------EPS-----------------EALSLLDEMLDSRIEVTVVTFCVL 86
                            P+                 +A+ +L++ML+ ++   VVT+  L
Sbjct: 409 IEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSL 468

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           IDG C+SG    A      M D GL P+   YT++ID LCK   +E A +LFD + ++D+
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDV 528

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           IP+   YTALIDGY K     EA  +  +M       +   + +L+ GL   G L+EA +
Sbjct: 529 IPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATL 588

Query: 207 LFHEMIGRGILP----DEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L  +M+   + P    D IL   LLK     G+ D A     +M+  G
Sbjct: 589 LEEKMVKIDLQPTVSTDTILIHRLLKD----GDFDHAYRRFQQMLSSG 632



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 133/255 (52%), Gaps = 1/255 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  +    +  Y  +I  LC   +  ++  L+ EM+E G+  N    T L+D+     +
Sbjct: 314 MKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCK 373

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL +ML+  +   V+T+  LI+G CK G++ +A+D    M    L PN   Y  
Sbjct: 374 LEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNE 433

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+N + +A  + ++M +R ++PD   Y +LIDG  +  +F  A  L + M + G
Sbjct: 434 LIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YTS++  L +   ++EA  LF  +  + ++P+ ++  +L+  + + G ++EA 
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552

Query: 241 ELQNEMMGRGLLSGS 255
            +  +M+ +  L  S
Sbjct: 553 LMLEKMLSKNCLPNS 567



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 120/247 (48%), Gaps = 1/247 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   Y ++I G C     + +  +  EM   G   N V  T L+          EA+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAM 308

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  +M D     TV T+ VLI  LC S    EA++    M + G+ PN+  YT LID L
Sbjct: 309 DLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSL 368

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C +  +E+AR L  +M ++ ++P+   Y ALI+GY K    ++AL++   M    +  + 
Sbjct: 369 CSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNT 428

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ G  +  ++ +A  + ++M+ R +LPD +   SL+      GN D A  L + 
Sbjct: 429 RTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487

Query: 246 MMGRGLL 252
           M  RGL+
Sbjct: 488 MNDRGLV 494



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 114/250 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y ++I G C    F+ +  LLS M + GL  +    T+++D+  K+  
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKR 512

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D +    +   VV +  LIDG CK+G V EA     +M      PN   + A
Sbjct: 513 VEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    ++ A  L ++M K D+ P  +  T LI   LK   F  A     +M   G
Sbjct: 573 LIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG 632

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D + YT+ +    R G LQ+A  +  +M   G+ PD     SL+K + + G  + A 
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAF 692

Query: 241 ELQNEMMGRG 250
            +   M   G
Sbjct: 693 VVLKRMHDTG 702



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 122/251 (48%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N++ +   Y  +I G C +     +  +L++M E  +  + V   +L+D   ++G 
Sbjct: 419 MESRNLRPNTRTYNELIKGYC-KRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL  M D  +     T+  +ID LCKS  V EA D F  +    + PNV +YTA
Sbjct: 478 FDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTA 537

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +  A  + ++M  ++ +P++  + ALI G       KEA  L+ +M ++ 
Sbjct: 538 LIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKID 597

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   ++  T L+  L + G    A   F +M+  G  PD     + ++ +   G + +A 
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAE 657

Query: 241 ELQNEMMGRGL 251
           ++  +M   G+
Sbjct: 658 DMVAKMKENGV 668



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 119/244 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++  L      ++ K +  EM E+ +  N      +++ Y K G   EA   +  ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ ++    T+  LI G C+   +  A   F  MP  G   N   YT LI GLC +  I+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +LF +M   D  P    YT LI      E   EALNL   M E G+  +++ YT L+
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L     L++AR L  +M+ +G++P+ I   +L+  + +RG +++A+++   M  R L 
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425

Query: 253 SGSK 256
             ++
Sbjct: 426 PNTR 429



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 107/228 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y ++I  LC   + E++  L   +++  +  N V+ T L+D Y KAG+
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  +L++ML        +TF  LI GLC  G ++EA     +M    L P V+  T 
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTI 607

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L K    + A   F +M      PD   YT  I  Y +    ++A ++  +M E G
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           V  DL  Y+SL+ G    G    A V+   M   G  P +   +SL+K
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIK 715



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 19/275 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K D   Y T I   C E + +D++ ++++MKENG++ +    ++L+  Y   G 
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGR 687

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLID---------------GLCKSGLVRE---AIDY 102
            + A  +L  M D+  E +  TF  LI                G+C    + E    ++ 
Sbjct: 688 TNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVEL 747

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYL 161
             +M + G+ PN   Y  L+ G+C+   +  A  +FD M +++ I P    + AL+    
Sbjct: 748 LEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCC 807

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           K E   EA  + + M  VG    L +   L+  L + G  +    +F  ++  G   DE+
Sbjct: 808 KLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDEL 867

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
               ++    ++G ++   EL N M   G    S+
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQ 902



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 80/183 (43%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DE  + + ++ +  +  L++ L + GLV E    +  M +  + PN+  Y  +++G CK 
Sbjct: 172 DESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKV 231

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A      + +  + PD   YT+LI GY + +    A  +   M   G   +  AY
Sbjct: 232 GNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAY 291

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T L+ GL     + EA  LF +M      P       L+K         EA+ L  EM  
Sbjct: 292 THLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEE 351

Query: 249 RGL 251
           +G+
Sbjct: 352 KGI 354



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 1/148 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y  ++ G+C       ++ +   M++  G++ + ++   L+    K  + +EA  ++D+M
Sbjct: 763 YEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDM 822

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +       + +  +LI  L K G        F  +   G + +   +  +IDG+ K+  +
Sbjct: 823 ICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLV 882

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDG 159
           E    LF+ M K      +  Y+ LI+G
Sbjct: 883 EAFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 133/252 (52%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++K D+     +I GLC E +  D+  + S M E GL  N V    L++ Y  A +  EA
Sbjct: 392 HVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEA 451

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L L    ++S      +T+ V+I+GLCK  ++  A   F +M D G+ P V  Y AL+  
Sbjct: 452 LKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTS 511

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC+++ +E+AR+LF EM   +   D  ++  +IDG LK    K A  L + M  + +  D
Sbjct: 512 LCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPD 571

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              ++ L+   S+ G L EA  L+ +M+  G +P  ++  SLLK +  +G  ++ I L +
Sbjct: 572 AVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLH 631

Query: 245 EMMGRGLLSGSK 256
           +M  + ++  SK
Sbjct: 632 QMADKDVVLDSK 643



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 2/252 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KG + + +L  Y  +I   C   +  +   LL EM+  GL A+  + ++L+ A+   G+ 
Sbjct: 177 KGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDI 236

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
                L DEML  ++   VVT+  L+ GL ++G  REA +    M   G+ P+V  YT L
Sbjct: 237 ETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVL 296

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            DGLCK      A  + D M ++   P T  Y  +++G  K +   +A  +   M + G 
Sbjct: 297 ADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGK 356

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG--ILPDEILCISLLKKHYERGNMDEA 239
             D   Y +L+ GL   G + EA  L+  ++     + PD   C +L++   + G + +A
Sbjct: 357 KPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDA 416

Query: 240 IELQNEMMGRGL 251
             + + M+  GL
Sbjct: 417 ARIHSSMVEMGL 428



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 2/244 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +KAD+ +Y ++I   C E   E  + L  EM    ++ N V  + LM    + G 
Sbjct: 211 MEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGR 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L +M    +   VV + VL DGLCK+G   +AI     M   G  P    Y  
Sbjct: 271 WREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNV 330

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK++ ++ A  + + M K+   PD   Y  L+ G        EA++L   +    
Sbjct: 331 VVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEK 390

Query: 181 VDLDLNAYT--SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             +  + +T  +L+ GL + G + +A  +   M+  G+  + +    L++ +     + E
Sbjct: 391 FHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIE 450

Query: 239 AIEL 242
           A++L
Sbjct: 451 ALKL 454



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 2/248 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y  +  GLC   +  D+  +L  M + G    T+    +++   K   
Sbjct: 281 MTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDR 340

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--PDFGLHPNVAVY 118
             +A  +++ M+    +   VT+  L+ GLC +G + EA+D +  +    F + P+V   
Sbjct: 341 MDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTC 400

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             LI GLCK+  +  A  +   M +  +  +   Y  LI+GYL      EAL L     E
Sbjct: 401 NNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVE 460

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G   +   Y+ ++ GL +   L  AR LF +M   GI P  I   +L+       ++++
Sbjct: 461 SGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQ 520

Query: 239 AIELQNEM 246
           A  L  EM
Sbjct: 521 ARSLFQEM 528



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 100/242 (41%), Gaps = 38/242 (15%)

Query: 48  CTTLMDAYFKAGE-----------------------------------PSEALSLLDEML 72
           C+TL+D   KA +                                   PS A S+L  M 
Sbjct: 45  CSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMT 104

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF--GLHPNVAVYTALIDGLCKKNC 130
                V V    +++ G C+SG   +A+  F +M      + P+   Y  L++G CK   
Sbjct: 105 KRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKR 164

Query: 131 IERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
           +  AR LF+ M K  D  P+   Y+ LID Y K     E L L   M   G+  D+  Y+
Sbjct: 165 LAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYS 224

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           SL+      G ++  R LF EM+ R + P+ +    L++     G   EA E+  +M  R
Sbjct: 225 SLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTAR 284

Query: 250 GL 251
           G+
Sbjct: 285 GV 286



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 75/157 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I+  +  Y  ++  LC E   E ++ L  EM+      + V    ++D   KAG+
Sbjct: 493 MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGD 552

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM    +    VTF +LI+   K G++ EA+  + +M   G  P V V+ +
Sbjct: 553 VKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDS 612

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           L+ G   K   E+  +L  +M  +D++ D+   + ++
Sbjct: 613 LLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTIL 649


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 125/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+AD+ ++ TII  LC     +D+  L  EM+  G+  N V  ++L+      G 
Sbjct: 175 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 234

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL +M++ +I   +VTF  LID   K G   EA      M    + P++  Y +
Sbjct: 235 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 294

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C  + +++A+ +F+ M  +D  PD   Y  LI G+ K +  ++   L   M+  G
Sbjct: 295 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 354

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT+L+ GL   G    A+ +F +M+  G+ PD +    LL      G +++A+
Sbjct: 355 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 414

Query: 241 ELQNEM 246
           E+ + M
Sbjct: 415 EVFDYM 420



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 125/246 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GL + +K  ++  L+  M + G   N V    +++   K G+   A +
Sbjct: 111 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 170

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL++M  ++IE  VV F  +ID LCK   V +A++ F  M   G+ PNV  Y++LI  LC
Sbjct: 171 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 230

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L  +M ++ + P+   + ALID ++K   F EA  L + M +  +D D+ 
Sbjct: 231 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 290

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y SL+ G      L +A+ +F  M+ +   PD     +L+K   +   +++  EL  EM
Sbjct: 291 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 350

Query: 247 MGRGLL 252
             RGL+
Sbjct: 351 SHRGLV 356



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + +L  YG ++ GLC     + +  LL++M+   + A+ VI  T++D+  K   
Sbjct: 140 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 199

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  EM    I   VVT+  LI  LC  G   +A      M +  ++PN+  + A
Sbjct: 200 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 259

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+     A  L D+M KR + PD   Y +LI+G+  H+   +A  +   M    
Sbjct: 260 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 319

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL+ Y +L+ G  +   +++   LF EM  RG++ D +   +L++  +  G+ D A 
Sbjct: 320 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 379

Query: 241 ELQNEMMGRGL 251
           ++  +M+  G+
Sbjct: 380 KVFKQMVSDGV 390



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 117/242 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ ++  Y ++I  LC   ++ D+  LLS+M E  +  N V    L+DA+ K G+
Sbjct: 210 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 269

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D+M+   I+  + T+  LI+G C    + +A   F  M      P++  Y  
Sbjct: 270 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 329

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E    LF EM  R ++ DT  YT LI G         A  +  +M   G
Sbjct: 330 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 389

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y+ L+ GL   G L++A  +F  M    I  D  +  ++++   + G +D+  
Sbjct: 390 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 449

Query: 241 EL 242
           +L
Sbjct: 450 DL 451



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 129/268 (48%), Gaps = 19/268 (7%)

Query: 3   GKNIKAD--LPLYGTIIWGLCIESKFEDSKLL-----------------LSEMKENGLTA 43
           GK++K D  + L+G ++    + S FE +KLL                 L +M + G   
Sbjct: 18  GKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEP 77

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           + V  ++L++ Y      S+A++L+D+M++       +TF  LI GL       EA+   
Sbjct: 78  SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 137

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            RM   G  PN+  Y  +++GLCK+  I+ A NL ++M    +  D   +  +ID   K+
Sbjct: 138 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 197

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               +ALNL   M   G+  ++  Y+SL+  L   G   +A  L  +MI + I P+ +  
Sbjct: 198 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 257

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +L+    + G   EA +L ++M+ R +
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSI 285



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 101/211 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   DL  Y T+I G C   + ED   L  EM   GL  +TV  TTL+   F  G+
Sbjct: 315 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 374

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+   +   ++T+ +L+DGLC +G + +A++ F  M    +  ++ +YT 
Sbjct: 375 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 434

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   ++   +LF  +  + + P+   Y  +I G       +EA  L  +M E G
Sbjct: 435 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
              D   Y +L+    R G    +  L  EM
Sbjct: 495 PLPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 113/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  D+  Y ++I G C+  + + +K +   M       +     TL+  + K+  
Sbjct: 280 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 339

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L  EM    +    VT+  LI GL   G    A   F +M   G+ P++  Y+ 
Sbjct: 340 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 399

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +E+A  +FD M K ++  D   YT +I+G  K     +  +L   ++  G
Sbjct: 400 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 459

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y +++ GL     LQEA  L  +M   G LPD     +L++ H   G+   + 
Sbjct: 460 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 519

Query: 241 ELQNEM 246
           EL  EM
Sbjct: 520 ELIREM 525



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 41/73 (56%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K ++  Y T+I GLC +   +++  LL +MKE+G   ++    TL+ A+ + G+ + 
Sbjct: 458 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 517

Query: 64  ALSLLDEMLDSRI 76
           +  L+ EM   R 
Sbjct: 518 SAELIREMRSCRF 530


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 127/254 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ ++IKA +  Y  +I  LC +   +D+  L +EM+  G+ A+ V  ++++      G 
Sbjct: 235 MEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGR 294

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +L EM+   I   VVTF  LID   K G + EA + +  M   G+ P+   Y++
Sbjct: 295 WDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSS 354

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+N +  A  + D M  +   P+   Y+ LI+ Y K +     + L   ++  G
Sbjct: 355 LIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKG 414

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +LV G  + G L  A+ LF EM+ RG+ P  +    LL    + G + +A+
Sbjct: 415 LVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKAL 474

Query: 241 ELQNEMMGRGLLSG 254
           E+  +M    ++ G
Sbjct: 475 EIFEKMQKSRMILG 488



 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 114/212 (53%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   NT+  +TL++ +   G  SEA++L+D M++ +    VVT   LI+GLC  G V EA
Sbjct: 134 GFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEA 193

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    RM  +G   N   Y  +++ +CK      A +LF +M +R +      Y+ +ID 
Sbjct: 194 LVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDS 253

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K  +  +AL+L N M   G+  D+ AY+S++ GL   G   +   +  EMIGR I+P+
Sbjct: 254 LCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPN 313

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   +L+    + G + EA EL NEM+ RG+
Sbjct: 314 VVTFSALIDVFVKEGKLLEAKELYNEMVARGI 345



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 125/239 (52%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T+I GLC++ +  ++ +L+  M + G  AN +    +++   K+G  + AL L  +M + 
Sbjct: 179 TLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEER 238

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            I+ +VV + ++ID LCK G + +A+  F  M   G+  +V  Y+++I GLC     +  
Sbjct: 239 SIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDG 298

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             +  EM  R++IP+   ++ALID ++K     EA  L N M   G+  D   Y+SL+ G
Sbjct: 299 AKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDG 358

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
             +   L EA  +   M+ +G  P+ +    L+  + +   +D  + L  E+  +GL++
Sbjct: 359 FCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVA 417



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 124/238 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C+E +  ++  L+  M E     N V   TL++     G  +EAL L+D M+
Sbjct: 142 FSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV 201

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E   +T+  +++ +CKSG    A+D F +M +  +  +V  Y+ +ID LCK   ++
Sbjct: 202 KYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLD 261

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +LF+EM  + +  D  AY+++I G      + +   +   M    +  ++  +++L+
Sbjct: 262 DALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALI 321

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               + G L EA+ L++EM+ RGI PD I   SL+    +   + EA ++ + M+ +G
Sbjct: 322 DVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I G C E++  ++  +L  M   G   N V  + L+++Y KA  
Sbjct: 340 MVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKR 399

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + L  E+    +    VT+  L+ G C+SG +  A + F  M   G+ P+V  Y  
Sbjct: 400 VDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGI 459

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +++A  +F++M K  MI     Y  +I G        +A +L   ++  G
Sbjct: 460 LLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKG 519

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y  ++ GL + G L EA +LF +M   G  P +     L++ H     +  ++
Sbjct: 520 VKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSV 579

Query: 241 ELQNEMMGRGL 251
           EL  EM  RG 
Sbjct: 580 ELIEEMKMRGF 590



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 88/196 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K + AD   Y T++ G C   K   +K L  EM   G+  + V    L+D     GE
Sbjct: 410 ISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 469

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + ++M  SR+ + +  + ++I G+C +  V +A   F  +   G+ P+V  Y  
Sbjct: 470 LQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNV 529

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCKK  +  A  LF +M +    P    Y  LI  +L       ++ L   M   G
Sbjct: 530 MIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRG 589

Query: 181 VDLDLNAYTSLVWGLS 196
              D +    +V  LS
Sbjct: 590 FAADASTIKMVVVMLS 605



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 90/203 (44%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           + L  A  +  E    L    EM  + IE  + T  ++I+  C+   +  A    GR   
Sbjct: 73  SKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALK 132

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
           FG  PN   ++ LI+G C +  +  A  L D M +    P+      LI+G        E
Sbjct: 133 FGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTE 192

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           AL L +RM + G + +   Y  ++  + + G+   A  LF +M  R I    +    ++ 
Sbjct: 193 ALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVID 252

Query: 229 KHYERGNMDEAIELQNEMMGRGL 251
              + GN+D+A+ L NEM  +G+
Sbjct: 253 SLCKDGNLDDALSLFNEMEMKGI 275


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 128/257 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ +L  Y  +I   C   +FE ++ L  EM   G+  N V   TL+    + G+
Sbjct: 99  MRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGK 158

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LLD M       +++TF +L+DG  K+G +  A+ +F +M   G  P+   Y  
Sbjct: 159 LWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNM 218

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   + RA     +M +R + P    YT LID + +     +A  +   M + G
Sbjct: 219 LIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAG 278

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +++D + Y  LV  L   G++++AR LF  M  +G+ P  ++   ++  +   G+  +A+
Sbjct: 279 LEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKAL 338

Query: 241 ELQNEMMGRGLLSGSKN 257
           +L  EM  +GL+  S +
Sbjct: 339 KLIMEMRQKGLIPNSAS 355



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 102/250 (40%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K  +   D+     ++ G C      +++ +  EM   GL  N V  T LM  YF  G+ 
Sbjct: 30  KSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQR 89

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +  +L +EM    +E  + T+  LI   C++G    A   F  MP  G+  NV  Y  L
Sbjct: 90  EKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTL 149

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I GLC+   +  A  L D M      P    +  L+DGY K      AL   N+M   G 
Sbjct: 150 IAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGF 209

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
                 Y  L+ G  R   +  A     +M  RG+ P ++    L+       +M +A E
Sbjct: 210 QPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFE 269

Query: 242 LQNEMMGRGL 251
           +   M   GL
Sbjct: 270 ILAGMEKAGL 279



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 9/244 (3%)

Query: 17  IWG--------LCIESKFEDSKLLLSEMKENGLTA-NTVICTTLMDAYFKAGEPSEALSL 67
           +WG        LC       +  +L+   ++G  A +   CT L++   K G+ +EA  +
Sbjct: 1   MWGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRV 60

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            DEM    +    VT+  L+ G    G   +    F  M   G+ PN+  Y  LI   C+
Sbjct: 61  FDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR 120

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
               ERAR+LFDEMP R ++ +  +Y  LI G  +H    +A  L + M   G    +  
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +  LV G  + G +  A   F++M   G  P  +    L+       +M  A    ++M 
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240

Query: 248 GRGL 251
            RGL
Sbjct: 241 ERGL 244



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 35/262 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T+I GLC   K  D+  LL  M+  G   + +    L+D Y KAG+
Sbjct: 134 MPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGK 193

Query: 61  PSEALSL-----------------------------------LDEMLDSRIEVTVVTFCV 85
            S AL                                     L +M +  +E T VT+ +
Sbjct: 194 MSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTI 253

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LID   +   + +A +    M   GL  +   Y  L+  LC +  ++ AR LF  M ++ 
Sbjct: 254 LIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P    Y  +I GY +  S  +AL L   M + G+  +  +Y   +  L +    QEA 
Sbjct: 314 VEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAE 373

Query: 206 VLFHEMIGRGILPDEILCISLL 227
            L  +M+  G+   E +C +LL
Sbjct: 374 ALLDDMVRAGLQTSESICQALL 395



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 74/193 (38%), Gaps = 35/193 (18%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    +     Y  +I G C       +   LS+MKE GL    V  T L+D++ +   
Sbjct: 204 MKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENH 263

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF----------------- 103
             +A  +L  M  + +EV   T+ VL+  LC  G +++A   F                 
Sbjct: 264 MGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDM 323

Query: 104 -----GR-------------MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                GR             M   GL PN A Y   I  LCK +  + A  L D+M +  
Sbjct: 324 MIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAG 383

Query: 146 MIPDTTAYTALID 158
           +    +   AL+D
Sbjct: 384 LQTSESICQALLD 396



 Score = 43.1 bits (100), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 1/135 (0%)

Query: 119 TALIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
            A +  LC    +  A  +     K  D   D TA TAL++G  K     EA  + + M 
Sbjct: 6   AAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMP 65

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
            +G+  +   YT+L+ G    G  ++   LF EM   G+ P+      L+ +    G  +
Sbjct: 66  LLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFE 125

Query: 238 EAIELQNEMMGRGLL 252
            A  L +EM  RG++
Sbjct: 126 RARSLFDEMPVRGIV 140


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 128/257 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ +L  Y  +I   C   +FE ++ L  EM   G+  N V   TL+    + G+
Sbjct: 99  MRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGK 158

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LLD M       +++TF +L+DG  K+G +  A+ +F +M   G  P+   Y  
Sbjct: 159 LWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNM 218

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   + RA     +M +R + P    YT LID + +     +A  +   M + G
Sbjct: 219 LIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAG 278

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +++D + Y  LV  L   G++++AR LF  M  +G+ P  ++   ++  +   G+  +A+
Sbjct: 279 LEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKAL 338

Query: 241 ELQNEMMGRGLLSGSKN 257
           +L  EM  +GL+  S +
Sbjct: 339 KLIMEMRQKGLIPNSAS 355



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 100/243 (41%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+     ++ G C      +++ +  EM   GL  N V  T LM  YF  G+  +  +L 
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM    +E  + T+  LI   C++G    A   F  MP  G+  NV  Y  LI GLC+ 
Sbjct: 97  EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  L D M      P    +  L+DGY K      AL   N+M   G       Y
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+ G  R   +  A     +M  RG+ P ++    L+       +M +A E+   M  
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276

Query: 249 RGL 251
            GL
Sbjct: 277 AGL 279



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 9/244 (3%)

Query: 17  IWG--------LCIESKFEDSKLLLSEMKENGLTA-NTVICTTLMDAYFKAGEPSEALSL 67
           +WG        LC       +  +L+   ++G  A +   CT L++   K G+ +EA  +
Sbjct: 1   MWGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRV 60

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            DEM    +    VT+  L+ G    G   +    F  M   G+ PN+  Y  LI   C+
Sbjct: 61  FDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR 120

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
               ERAR+LFDEMP R ++ +  +Y  LI G  +H    +A  L + M   G    +  
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +  LV G  + G +  A   F++M   G  P  +    L+       +M  A    ++M 
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240

Query: 248 GRGL 251
            RGL
Sbjct: 241 ERGL 244



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 35/246 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T+I GLC   K  D+  LL  M+  G   + +    L+D Y KAG+
Sbjct: 134 MPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGK 193

Query: 61  PSEALSL-----------------------------------LDEMLDSRIEVTVVTFCV 85
            S AL                                     L +M +  +E T VT+ +
Sbjct: 194 MSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTI 253

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LID   +   + +A +    M   GL  +   Y  L+  LC +  ++ AR LF  M ++ 
Sbjct: 254 LIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P    Y  +I GY +  S  +AL L   M + G+  +  +Y   +  L +    QEA 
Sbjct: 314 VEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAE 373

Query: 206 VLFHEM 211
            L  +M
Sbjct: 374 ALLDDM 379



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 84/179 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    +     Y  +I G C       +   LS+MKE GL    V  T L+D++ +   
Sbjct: 204 MKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENH 263

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +L  M  + +EV   T+ VL+  LC  G +++A   F  M + G+ P+  +Y  
Sbjct: 264 MGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDM 323

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +I G  ++    +A  L  EM ++ +IP++ +Y   I    K +  +EA  L + M  +
Sbjct: 324 MIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETI 382



 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 1/135 (0%)

Query: 119 TALIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
            A +  LC    +  A  +     K  D   D TA TAL++G  K     EA  + + M 
Sbjct: 6   AAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMP 65

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
            +G+  +   YT+L+ G    G  ++   LF EM   G+ P+      L+ +    G  +
Sbjct: 66  LLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFE 125

Query: 238 EAIELQNEMMGRGLL 252
            A  L +EM  RG++
Sbjct: 126 RARSLFDEMPVRGIV 140


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 127/244 (52%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++ D+ +Y TII G+C +    D+    SEM    +    V   TL+      G+  
Sbjct: 202 GKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLK 261

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ LL +M+   I  TV TF +L+D  CK G V+EA + F  M    + PN+  Y +L+
Sbjct: 262 DAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLM 321

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +G C  N + +A ++F+ M +  + PD  +Y+ +I G+ K +   EA+ L   M    + 
Sbjct: 322 NGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIF 381

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y SL+ GL + G +  A  L  EM  RG  P+ I   SLL    +  ++D+AIEL
Sbjct: 382 PDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIEL 441

Query: 243 QNEM 246
             ++
Sbjct: 442 LTKL 445



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 127/238 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC   + + +  +L  +    +  + V+  T++D   K    ++A     EM+
Sbjct: 177 YRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMV 236

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             RI  TVVT+  LI GLC  G +++AI    +M    ++P V  ++ L+D  CK+  ++
Sbjct: 237 AKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVK 296

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+N+F  M K+D+ P+   Y +L++GY       +A ++ N M ++GV  D+++Y+ ++
Sbjct: 297 EAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMI 356

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + EA  LF EM  + I PD +   SL+    + G +  A++L  EM  RG
Sbjct: 357 SGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG 414



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 106/219 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   +  Y T+I GLCI  + +D+  LL +M    +       + L+DA+ K G+
Sbjct: 235 MVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGK 294

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++   M+   ++  +VT+  L++G C    V +A   F  M   G+ P+V  Y+ 
Sbjct: 295 VKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSI 354

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G CK   ++ A  LF+EM  + + PD   Y +LIDG  K      AL L   M + G
Sbjct: 355 MISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG 414

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              ++  Y SL+  L +  H+ +A  L  ++    I P 
Sbjct: 415 QPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPS 453



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 104/199 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K++K ++  Y +++ G C+ ++   ++ + + M + G+  +    + ++  + K   
Sbjct: 305 MMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKM 364

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L +EM   +I   VVT+  LIDGLCKSG +  A+   G M D G  PN+  Y +
Sbjct: 365 VDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNS 424

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK + +++A  L  ++   ++ P    Y  LI+G  K    K+A  +   +   G
Sbjct: 425 LLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNG 484

Query: 181 VDLDLNAYTSLVWGLSRCG 199
            ++D+  Y +++ G  + G
Sbjct: 485 YNIDVYTYNTMIKGFCKKG 503



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 113/231 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +NI   +  +  ++   C E K +++K +   M +  +  N V   +LM+ Y    E ++
Sbjct: 273 ENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNK 332

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S+ + M    +   V ++ ++I G CK  +V EA+  F  M    + P+V  Y +LID
Sbjct: 333 AESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLID 392

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   I  A  L  EM  R   P+   Y +L+D   K+    +A+ L  ++ +  +  
Sbjct: 393 GLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQP 452

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            +  Y  L+ GL + G L++A+ +F +++  G   D     +++K   ++G
Sbjct: 453 SVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 110/249 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  KN    +  +G I+  L   + +     L  +M+ NG+ +N V  + L++ + + G 
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S + S+   +L    E   +T   LI GLC  G + +A+ +  ++   G   N   Y  
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK    + A  +   +  + +  D   Y  +IDG  K +   +A +  + M    
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +L+ GL   G L++A  L H+MI   I P       L+    + G + EA 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 241 ELQNEMMGR 249
            +   MM +
Sbjct: 300 NVFVVMMKK 308



 Score = 83.6 bits (205), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 108/220 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           + S + + G   + +  TTL+      G+  +AL   D++L    ++  V++  LI+GLC
Sbjct: 126 VFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLC 185

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G  + A++   R+    +  +V +Y  +IDG+CK   +  A + + EM  + + P   
Sbjct: 186 KVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVV 245

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  LI G       K+A+ L ++M    ++  +  ++ LV    + G ++EA+ +F  M
Sbjct: 246 TYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVM 305

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + + + P+ +   SL+  +     +++A  + N M   G+
Sbjct: 306 MKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGV 345


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 128/257 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ +L  Y  +I   C   +FE ++ L  EM   G+  N V   TL+    + G+
Sbjct: 99  MRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGK 158

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LLD M       +++TF +L+DG  K+G +  A+ +F +M   G  P+   Y  
Sbjct: 159 LWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNM 218

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   + RA     +M +R + P    YT LID + +     +A  +   M + G
Sbjct: 219 LIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAG 278

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +++D + Y  LV  L   G++++AR LF  M  +G+ P  ++   ++  +   G+  +A+
Sbjct: 279 LEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKAL 338

Query: 241 ELQNEMMGRGLLSGSKN 257
           +L  EM  +GL+  S +
Sbjct: 339 KLIMEMRQKGLIPNSAS 355



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 100/243 (41%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+     ++ G C      +++ +  EM   GL  N V  T LM  YF  G+  +  +L 
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM    +E  + T+  LI   C++G    A   F  MP  G+  NV  Y  LI GLC+ 
Sbjct: 97  EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  L D M      P    +  L+DGY K      AL   N+M   G       Y
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+ G  R   +  A     +M  RG+ P ++    L+       +M +A E+   M  
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276

Query: 249 RGL 251
            GL
Sbjct: 277 AGL 279



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 9/244 (3%)

Query: 17  IWG--------LCIESKFEDSKLLLSEMKENGLTA-NTVICTTLMDAYFKAGEPSEALSL 67
           +WG        LC       +  +L+   ++G  A +   CT L++   K G+ +EA  +
Sbjct: 1   MWGTTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRV 60

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            DEM    +    VT+  L+ G    G   +    F  M   G+ PN+  Y  LI   C+
Sbjct: 61  FDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR 120

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
               ERAR+LFDEMP R ++ +  +Y  LI G  +H    +A  L + M   G    +  
Sbjct: 121 TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIIT 180

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +  LV G  + G +  A   F++M   G  P  +    L+       +M  A    ++M 
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240

Query: 248 GRGL 251
            RGL
Sbjct: 241 ERGL 244



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 2/225 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    +     Y  +I G C       +   LS+MKE GL    V  T L+D++ +   
Sbjct: 204 MKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENH 263

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +L  M  + +EV   T+ VL+  LC  G +++A   F  M + G+ P+  +Y  
Sbjct: 264 MGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDM 323

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G  ++    +A  L  EM ++ +IP++ +Y   I    K +  +EA  L + M    
Sbjct: 324 MIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMET-- 381

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
           +      + + +   S      E +   H +  +G+L   IL IS
Sbjct: 382 IRSFAGHHQNFIASKSDSQQKDEDKCTEHFLQNKGLLSLSILPIS 426



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 35/246 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T+I GLC   K  D+  LL  M+  G   + +    L+D Y KAG+
Sbjct: 134 MPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGK 193

Query: 61  PSEALSL-----------------------------------LDEMLDSRIEVTVVTFCV 85
            S AL                                     L +M +  +E T VT+ +
Sbjct: 194 MSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTI 253

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LID   +   + +A +    M   GL  +   Y  L+  LC +  ++ AR LF  M ++ 
Sbjct: 254 LIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKG 313

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P    Y  +I GY +  S  +AL L   M + G+  +  +Y   +  L +    QEA 
Sbjct: 314 VEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAE 373

Query: 206 VLFHEM 211
            L  +M
Sbjct: 374 ALLDDM 379



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 1/135 (0%)

Query: 119 TALIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
            A +  LC    +  A  +     K  D   D TA TAL++G  K     EA  + + M 
Sbjct: 6   AAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMP 65

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
            +G+  +   YT+L+ G    G  ++   LF EM   G+ P+      L+ +    G  +
Sbjct: 66  LLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFE 125

Query: 238 EAIELQNEMMGRGLL 252
            A  L +EM  RG++
Sbjct: 126 RARSLFDEMPVRGIV 140


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 118/236 (50%), Gaps = 2/236 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y T+I G C   + +    ++ EM+E  G+  +     T++  + K G+  +A  + DEM
Sbjct: 150 YNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEM 209

Query: 72  L-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           L + ++E   V +  LI G C  G +  A+ Y G M D G+   VA Y   +  L  +  
Sbjct: 210 LTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGR 269

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A  L +EM ++ + PD   Y  LI+GY K    K+A+ +   M   G+   +  YTS
Sbjct: 270 AAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTS 329

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L+  LS  G +QE   LF++ + RGI PD  +  +L+  H   G+MD A E+  EM
Sbjct: 330 LIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEM 385



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 122/246 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ +  +Y  +I G C +   E +     EM + G++         +   F  G  +EA 
Sbjct: 215 VEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAH 274

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L++EM +  +     T+ +LI+G CK G  ++A+  F  M   G+   V  YT+LI  L
Sbjct: 275 ALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHAL 334

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
             K  ++    LF++  +R + PD   Y ALI+ +        A  +   M +  +  D 
Sbjct: 335 SMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDD 394

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL   G L EAR L  EM  RGI PD +   +L+  +  +G++ +A+++++E
Sbjct: 395 VTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDE 454

Query: 246 MMGRGL 251
           MMG+G 
Sbjct: 455 MMGKGF 460



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   +  Y   +  L +E +  ++  L+ EM E GL  +      L++ Y K G+
Sbjct: 245 MVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGK 304

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + + M+   I  TVVT+  LI  L   G+V+E    F      G+ P++ +Y A
Sbjct: 305 EKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNA 364

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  C    ++RA  +  EM K+ + PD   Y  L+ G        EA  L   MT+ G
Sbjct: 365 LINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRG 424

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL +Y +L+ G S  G +++A  +  EM+G+G  P  +   +++K     G   +A 
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAE 484

Query: 241 ELQNEMMGRGL 251
           +L  EM+G G+
Sbjct: 485 DLVKEMVGNGI 495



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 92/196 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I+A +  Y ++I  L ++   +++  L ++    G+  +  +   L++++   G+
Sbjct: 315 MVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGD 374

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  ++ EM   RI    VT+  L+ GLC  G + EA      M   G+ P++  Y  
Sbjct: 375 MDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNT 434

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G   K  I+ A  + DEM  +   P    Y A+I G   +    +A +L   M   G
Sbjct: 435 LISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNG 494

Query: 181 VDLDLNAYTSLVWGLS 196
           +  D + Y SL+ GL+
Sbjct: 495 ITPDDSTYISLIEGLT 510



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 97/238 (40%), Gaps = 33/238 (13%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           I T  +     +  P+ A  L  ++   R+ ++  TF +++  LC +G    A++   +M
Sbjct: 83  IPTASLHPLLSSLPPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQM 142

Query: 107 PDF--------------------------------GLHPNVAVYTALIDGLCKKNCIERA 134
           P                                  G+ P+   Y  +I G CK   +E A
Sbjct: 143 PSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDA 202

Query: 135 RNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
             +FDEM     + P+   Y ALI GY    + + AL  +  M + GV + +  Y   V 
Sbjct: 203 TKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVH 262

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L   G   EA  L  EM  +G+ PD      L+  + + G   +A+++   M+G+G+
Sbjct: 263 TLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGI 320


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 35/261 (13%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            ++  N K ++  Y  +I G C E K   +++L   MKE GL  NT   TTL+D + KAG 
Sbjct: 963  IRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGN 1022

Query: 61   PS-----------------------------------EALSLLDEMLDSRIEVTVVTFCV 85
             S                                   EA  LL+    ++IE   VT+ +
Sbjct: 1023 FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTI 1082

Query: 86   LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
            LI   CK   + +A+ +  +M   G  P++ +YT LI   C++N ++ +  LFDE+ K  
Sbjct: 1083 LISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLG 1142

Query: 146  MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            + P    YT++I GY + +    A+    +M++ G   D  +Y +L+ GL +   L EAR
Sbjct: 1143 LAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEAR 1202

Query: 206  VLFHEMIGRGILPDEILCISL 226
             L+  MI +G+ P E+  ++L
Sbjct: 1203 QLYDTMIDKGLSPCEVTRVTL 1223



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 1/245 (0%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  + +  D   Y  II G C      ++   + EM E G   +    T ++ A+ +   
Sbjct: 822  MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 881

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + A+    ++    +   ++ +  +I GLCK G V++A +    M   G  PNV  +T+
Sbjct: 882  VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 941

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LI GLCKK   ERA  LF ++ + D   P+   YTA+I GY K E    A  L  RM E 
Sbjct: 942  LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 1001

Query: 180  GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            G+  + N YT+L+ G  + G+  +A  L   M   G  P+     S++    +RG  +EA
Sbjct: 1002 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEA 1061

Query: 240  IELQN 244
             +L N
Sbjct: 1062 FKLLN 1066



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 1/247 (0%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            +  +L  Y ++I GLC     + +  LL EM +NG   N    T+L+    K G    A 
Sbjct: 897  LSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAF 956

Query: 66   SLLDEMLDS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             L  +++ S   +  V T+  +I G CK   +  A   F RM + GL PN   YT LIDG
Sbjct: 957  RLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDG 1016

Query: 125  LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             CK     +A  L + M      P+T  Y +++DG  K    +EA  L N   +  ++ D
Sbjct: 1017 HCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEAD 1076

Query: 185  LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
               YT L+    +   + +A V  ++M   G  PD  L  +L+     +  M ++ +L +
Sbjct: 1077 GVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFD 1136

Query: 245  EMMGRGL 251
            E++  GL
Sbjct: 1137 EVIKLGL 1143



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 1/245 (0%)

Query: 7    KADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K ++  + ++I GLC +   E + +L L  ++ +    N    T ++  Y K  + S A 
Sbjct: 933  KPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAE 992

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             L + M +  +     T+  LIDG CK+G   +A +    M + G  PN   Y +++DGL
Sbjct: 993  MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 1052

Query: 126  CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            CK+   E A  L +   +  +  D   YT LI    K     +AL   N+M +VG   D+
Sbjct: 1053 CKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDI 1112

Query: 186  NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            + YT+L+    R   ++++  LF E+I  G+ P +    S++  +     +  A++   +
Sbjct: 1113 HLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQK 1172

Query: 246  MMGRG 250
            M   G
Sbjct: 1173 MSDHG 1177



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 1/225 (0%)

Query: 32   LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
            +  EM   G+  ++     ++  Y + G   EA   + EM++    V   T  ++I   C
Sbjct: 818  VFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFC 877

Query: 92   KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
            +  LV  A+ +F ++   GL PN+  Y+++I GLCK+  +++A  L +EM K    P+  
Sbjct: 878  EKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVY 937

Query: 152  AYTALIDGYLKHESFKEALNLKNRMTEV-GVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             +T+LI G  K    + A  L  ++        +++ YT+++ G  +   L  A +LF  
Sbjct: 938  THTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFER 997

Query: 211  MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            M  +G++P+     +L+  H + GN  +A EL   M   G    +
Sbjct: 998  MKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNT 1042



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 3/217 (1%)

Query: 5    NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
             I+AD   Y  +I   C  +    + + L++M + G   +  + TTL+ A+ +     ++
Sbjct: 1072 QIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDS 1131

Query: 65   LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
              L DE++   +  T  T+  +I G C+   V  A+ +F +M D G  P+   Y ALI G
Sbjct: 1132 EKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISG 1191

Query: 125  LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            LCK++ ++ AR L+D M  + + P       L   Y K E F  A+ +  R+ +    L 
Sbjct: 1192 LCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNK---KLW 1248

Query: 185  LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
            +    +L+  L     +  A + FH+++ + +  D +
Sbjct: 1249 IRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRV 1285



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 74/157 (47%)

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G ++EA+D    M + GL     V   +I    +   +E A N+FDEM  R + PD+  Y
Sbjct: 775 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 834

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             +I GY ++ +  EA      M E G  +D    T ++        +  A   FH++  
Sbjct: 835 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 894

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G+ P+ I   S++    +RG++ +A EL  EM+  G
Sbjct: 895 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNG 931



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 91/192 (47%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++  + + G+  EA+ ++ +M +  + +T      +I    +  LV  A + F  M   G
Sbjct: 767 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           ++P+   Y  +I G C+   +  A     EM +R  + D    T +I  + +      A+
Sbjct: 827 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 886

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
              +++T++G+  +L  Y+S++ GL + G +++A  L  EM+  G  P+     SL+   
Sbjct: 887 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 946

Query: 231 YERGNMDEAIEL 242
            ++G  + A  L
Sbjct: 947 CKKGWTERAFRL 958


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 125/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++  +  + TI+ GLC+E     +   +  +K+ G  +++  C  + +   K G  S AL
Sbjct: 149 VEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAAL 208

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S L +M +    + V  +  ++DGLCK G+V EA++ F +M   G+ P++  Y  LI GL
Sbjct: 209 SYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGL 268

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  +  + A  L   M ++ ++PD   +  +   + K      A ++ + M  +G++ D+
Sbjct: 269 CNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDV 328

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YTS++        +++A  +F  MI +G LP+ +   SL+    E  NM++A+    E
Sbjct: 329 VTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGE 388

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 389 MVNNGL 394



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 105/221 (47%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L  M + G+  + V   T+++     G  ++A+  +D + D   E    T   + +GLC
Sbjct: 140 VLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITNGLC 199

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G    A+ Y  +M +   + +V  Y+ ++DGLCK   +  A NLF +M  + + PD  
Sbjct: 200 KVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLF 259

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  LI G    + +KEA  L   M   G+  D+  +  +     + G +  A+ +F  M
Sbjct: 260 TYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFM 319

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  GI  D +   S++  H     M +A+E+ + M+ +G L
Sbjct: 320 VHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCL 360



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 114/246 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ KN   D+  Y  ++ GLC +    ++  L S+M   G+  +      L+        
Sbjct: 214 MEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDR 273

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M+   I   V TF V+     K+G++  A   F  M   G+  +V  YT+
Sbjct: 274 WKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTS 333

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   C  N ++ A  +FD M  +  +P+   YT+LI G+ + ++  +A+     M   G
Sbjct: 334 IIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNG 393

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D ++  +++L+ G+ + G    A+ LF  M   G LP+   C  +L   ++     EA+
Sbjct: 394 LDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAM 453

Query: 241 ELQNEM 246
            L  E+
Sbjct: 454 SLFREL 459



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 94/188 (50%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
             S+L  M    +E ++VTF  +++GLC  G V +AI +   + D G   +     A+ +
Sbjct: 137 GFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDHLKDMGYESDSYTCGAITN 196

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK      A +   +M +++   D TAY+ ++DG  K     EALNL ++MT  G+  
Sbjct: 197 GLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQP 256

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           DL  Y  L+ GL      +EA  L   M+ +GI+PD      +  + ++ G +  A  + 
Sbjct: 257 DLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGMISRAKSIF 316

Query: 244 NEMMGRGL 251
           + M+  G+
Sbjct: 317 SFMVHMGI 324



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I+ DL  Y  +I GLC   +++++  LL+ M   G+  +      +   +FK G 
Sbjct: 249 MTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFFKTGM 308

Query: 61  PSEALSLLDEMLDSRIEVTVVTF---------------------------CV-------- 85
            S A S+   M+   IE  VVT+                           C+        
Sbjct: 309 ISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTS 368

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G C++  + +A+ + G M + GL PNV  ++ LI G+CK      A+ LF  M K  
Sbjct: 369 LIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHG 428

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            +P+      ++DG  K     EA++L   + ++  DL++  Y  ++ G+   G L +A 
Sbjct: 429 QLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDAL 488

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            LF  +  +G+  D +    ++K   + G +D+A +L  +M   G
Sbjct: 489 ELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENG 533



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 108/215 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D+  Y +II   C+ ++ +D+  +   M   G   N V  T+L+  + +    ++A+
Sbjct: 324 IEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMISKGCLPNIVTYTSLIHGWCETKNMNKAM 383

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             L EM+++ ++  VVT+  LI G+CK+G    A + F  M   G  PN+     ++DGL
Sbjct: 384 YFLGEMVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGL 443

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K N    A +LF E+ K +   +   Y  ++DG        +AL L + ++  GV +D+
Sbjct: 444 FKCNFHSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDV 503

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
             Y  ++ GL + G L +A  L  +M   G  P+E
Sbjct: 504 VTYNIMIKGLCKEGLLDDAEDLLMKMEENGCPPNE 538



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 4/198 (2%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           K    + A+SL+  M    ++ TV T  ++I+ LC+           G M   G+ P++ 
Sbjct: 95  KMKHYTTAISLIKHMSYIGVKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIV 154

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT--ALIDGYLKHESFKEALNLKN 174
            +  +++GLC +  + +A    D +  +DM  ++ +YT  A+ +G  K      AL+   
Sbjct: 155 TFNTIVNGLCVEGNVAQAIRFVDHL--KDMGYESDSYTCGAITNGLCKVGHSSAALSYLK 212

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
           +M E   +LD+ AY+ +V GL + G + EA  LF +M G+GI PD      L+       
Sbjct: 213 KMEEKNCNLDVTAYSGVVDGLCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFD 272

Query: 235 NMDEAIELQNEMMGRGLL 252
              EA  L   MM +G++
Sbjct: 273 RWKEAAPLLANMMRKGIM 290



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 88/184 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  + T+I G+C   K   +K L   M ++G   N   C  ++D  FK   
Sbjct: 389 MVNNGLDPNVVTWSTLIGGVCKAGKPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNF 448

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA+SL  E+     ++ ++ + +++DG+C SG + +A++ F  +   G+  +V  Y  
Sbjct: 449 HSEAMSLFRELEKMNWDLNIIIYNIILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNI 508

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK+  ++ A +L  +M +    P+   Y   + G L+     ++      M + G
Sbjct: 509 MIKGLCKEGLLDDAEDLLMKMEENGCPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKG 568

Query: 181 VDLD 184
              D
Sbjct: 569 FQAD 572



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 97/242 (40%), Gaps = 1/242 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  Y ++I G C       +   L EM  NGL  N V  +TL+    KAG+
Sbjct: 354 MISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGK 413

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P  A  L   M        + T  +++DGL K     EA+  F  +       N+ +Y  
Sbjct: 414 PVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNI 473

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG+C    +  A  LF  +  + +  D   Y  +I G  K     +A +L  +M E G
Sbjct: 474 ILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENG 533

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y   V GL R   + ++      M  +G   D       L  ++     + A+
Sbjct: 534 CPPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATT-TKFLINYFSANKENRAL 592

Query: 241 EL 242
           E+
Sbjct: 593 EV 594



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 39/201 (19%), Positives = 80/201 (39%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
            +D+   A     AL    +M+  +    V  F +L   + K      AI     M   G
Sbjct: 54  FLDSMRNAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIG 113

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P V     +I+ LC+ +      ++   M K  + P    +  +++G     +  +A+
Sbjct: 114 VKPTVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAI 173

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
              + + ++G + D     ++  GL + GH   A     +M  +    D      ++   
Sbjct: 174 RFVDHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGL 233

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + G + EA+ L ++M G+G+
Sbjct: 234 CKDGMVFEALNLFSQMTGKGI 254


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 3/236 (1%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  LC+  + +D++ L+ EM   G+ AN +  + L+D   K     EA++L++ M +  
Sbjct: 80  VVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERG 139

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
              TVVT+  +I G C++  V EA  +  +M   G HP++  YTALI G CK   + R  
Sbjct: 140 CAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGL 199

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L  E+ +R   PD   Y+ +IDG  K    ++A+++   M+     +    Y SL+ G 
Sbjct: 200 ELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI---TYNSLIGGY 256

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            R G + EA  L  +M+     PD +   +L+    + G +D+A EL  +M+   L
Sbjct: 257 CRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL 312



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 121/250 (48%), Gaps = 3/250 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + A+   Y  ++ GLC   + +++  L+  M E G     V   +++  + +A  
Sbjct: 100 MLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARR 159

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   +++M+       ++T+  LI G CKS  V   ++  G +   G  P++  Y+ 
Sbjct: 160 VDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYST 219

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   +  A ++F+EM      P    Y +LI GY +     EA+ L  +M +  
Sbjct: 220 VIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YT+L+    + G L +A  LF +M+   + PD +   SL+      G M++A+
Sbjct: 277 CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 336

Query: 241 ELQNEMMGRG 250
           EL  E+  RG
Sbjct: 337 ELLEEITRRG 346



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 5/256 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +    D+  Y T+I GLC   +  D+  +  EM         +   +L+  Y +AG+  E
Sbjct: 208 RGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDE 264

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ LL +M+D +    VVT+  L+   CK G + +A + F +M    L P+V  +T+L+D
Sbjct: 265 AIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVD 324

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC +  +E A  L +E+ +R   P    Y  ++DGY K    ++A  L       G   
Sbjct: 325 GLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVP 384

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLLKKHYER-GNMDEAIE 241
           +   Y  LV G  R G   +A     ++    G  P  +   +++     R G  D+A++
Sbjct: 385 NTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQ 444

Query: 242 LQNEMMGRGLLSGSKN 257
              EM+ RG +  +  
Sbjct: 445 FYEEMIQRGYVPAAAT 460



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 3/239 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y  ++ GL    +  D+  +L EM       +    T ++ +        +A  L+
Sbjct: 38  DFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELV 97

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EML   +    +T+  L+DGLCK   + EA+     M + G  P V  Y ++I G C+ 
Sbjct: 98  EEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRA 157

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A    ++M      PD   YTALI G+ K       L L   +T  G   D+  Y
Sbjct: 158 RRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTY 217

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           ++++ GL + G L++A  +F EM      P  I   SL+  +   G+MDEAI L  +M+
Sbjct: 218 STVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMV 273



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 10/248 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C     +++  LL +M ++    + V  TTLM A+ K G   +A  L  +M+
Sbjct: 249 YNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMV 308

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +++   VVTF  L+DGLC  G + +A++    +   G  P +  Y  ++DG CK N + 
Sbjct: 309 ANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVR 368

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG--VDLDLNAYTS 190
           +A  L  +   R  +P+T  Y  L+ G  +     +AL   +++   G      +  Y  
Sbjct: 369 KAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAI 428

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNMDEAIELQNEM 246
           ++  L R G   +A   + EMI RG +P       +  +L K H  +    +A EL  EM
Sbjct: 429 ILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ----QAHELLEEM 484

Query: 247 MGRGLLSG 254
           +  G   G
Sbjct: 485 IKYGHTPG 492



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 3/243 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G C   + +++   + +M   G   + +  T L+  + K+ +    L LL E+ 
Sbjct: 147 YNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVT 206

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+  +IDGLCK+G +R+A+D F  M      P    Y +LI G C+   ++
Sbjct: 207 RRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMD 263

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  +M      PD   YT L+  + K     +A  L  +M    +  D+  +TSLV
Sbjct: 264 EAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLV 323

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL   G +++A  L  E+  RG  P       ++  + +   + +A EL  +   RG +
Sbjct: 324 DGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFV 383

Query: 253 SGS 255
             +
Sbjct: 384 PNT 386



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 1/211 (0%)

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           +   T++   ++    +AG    AL +  +M D+      +T+  L+ GL K+  +R+A+
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAV 59

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
                M      P+    T ++  LC  + ++ AR L +EM  R M  +   Y+AL+DG 
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K E   EA+ L   M E G    +  Y S++ G  R   + EA     +M+  G  PD 
Sbjct: 120 CKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDI 179

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I   +L+    +  ++   +EL  E+  RG 
Sbjct: 180 ITYTALIGGFCKSRDVGRGLELLGEVTRRGF 210



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 95/213 (44%), Gaps = 2/213 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  + +++ GLC E + ED+  LL E+   G          ++D Y KA +
Sbjct: 307 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQ 366

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG--LHPNVAVY 118
             +A  L+ +          VT+ +L+ G C++G   +A+ Y  ++   G     +VA+Y
Sbjct: 367 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY 426

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             ++D LC+    + A   ++EM +R  +P    +  ++    K    ++A  L   M +
Sbjct: 427 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 486

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            G         ++V    R G +Q+A  L  E+
Sbjct: 487 YGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 1/110 (0%)

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           M P T  +  +I G  +    + AL +  +M +     D   YT LV GLS+   L++A 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPP-DFLTYTKLVHGLSKARRLRDAV 59

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            +  EM+    +PD      +++       +D+A EL  EM+ RG+ + +
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANA 109


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 119/242 (49%), Gaps = 9/242 (3%)

Query: 13  YGTIIWGLCIESKFEDS----KL-----LLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + TII GLC +SK + +    KL     LL  M ++G   + V  +TL+          +
Sbjct: 466 HNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 525

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL++M+  + + TVVT   LI GLCK+G ++EA +    M   G  P+V  Y  L+ 
Sbjct: 526 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 585

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C+    ERAR L  +M  R + P+   YTAL+ G  K     EA  +  +M   G   
Sbjct: 586 GHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAP 645

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +L  YT+L+ G    G +     LF EM+  GI PD ++  +L  +  + G    A+E+ 
Sbjct: 646 NLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 705

Query: 244 NE 245
            E
Sbjct: 706 RE 707



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 126/259 (48%), Gaps = 9/259 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  D   YG +I GL    K  D++ L  ++  +G+T +TV  T+L+     A  
Sbjct: 314 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 373

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  +M       + VT+ V+ID  CK G++ EA D   +M + G  P+V  Y  
Sbjct: 374 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 433

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE---------SFKEALN 171
           ++DGLCK + +E A  LF+EM +    P+  ++  +I G  +              EA  
Sbjct: 434 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFR 493

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
           L  RMT+ G   D+  Y++L+ GL     + +AR L  +M+ R   P  +   +L+    
Sbjct: 494 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 553

Query: 232 ERGNMDEAIELQNEMMGRG 250
           + G + EA E+ + M+  G
Sbjct: 554 KAGRIKEAREVLDAMVSSG 572



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 98/212 (46%), Gaps = 2/212 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC  ++ +D++ LL +M +       V   TL+    KAG   EA  +L
Sbjct: 506 DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVL 565

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+ S     VVT+  L+ G C++G    A +    M   GL PNV  YTAL+ GLCK 
Sbjct: 566 DAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKA 625

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +  A  +F +M      P+   YTALI G+         L L   M   G+  D   Y
Sbjct: 626 NRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 685

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            +L   L + G    A  +  E  GR  L  E
Sbjct: 686 GTLAAELCKSGRSARALEILRE--GRESLRSE 715



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 9/242 (3%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +++ GL    + +++   L   +EN      V    L++ +   G+  +A  LL  M D 
Sbjct: 185 SVLVGLMDSGRIDEA---LQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDE 241

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFG------RMPDFGLHPNVAVYTALIDGLCKK 128
                 V++C ++DGLCK+G V EA+  FG              P++  Y  +I GLC+ 
Sbjct: 242 ECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQN 301

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + I+ A  +F++M +R++ PD+ +Y  LIDG  K     +A NL  ++   GV     AY
Sbjct: 302 DRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAY 361

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           TSL+ GL       +AR LF +M  RG  P  +    ++    +RG ++EA +L  +M+ 
Sbjct: 362 TSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIE 421

Query: 249 RG 250
            G
Sbjct: 422 DG 423



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 9/246 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC   + +++  +  +M E  ++ ++     L+D   KAG+ ++A +L  ++L
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S +  + V +  LI GLC +    +A + F  M   G  P+   Y  +ID  CK+  +E
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L  +M +   +PD   Y  ++DG  K    +EAL L N M  +G   +  ++ +++
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470

Query: 193 WGLSR-------C--GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            GL +       C  G L EA  L   M   G +PD +   +L+        +D+A  L 
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530

Query: 244 NEMMGR 249
            +M+ R
Sbjct: 531 EDMVKR 536



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 110/249 (44%), Gaps = 2/249 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K  +    T+I GLC   + ++++ +L  M  +G + + V   TL+  + +AG+
Sbjct: 533 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 592

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL +M+   +   VVT+  L+ GLCK+  + EA   F +M   G  PN+  YTA
Sbjct: 593 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 652

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL--KNRMTE 178
           LI G C    ++    LF EM    + PD   Y  L     K      AL +  + R + 
Sbjct: 653 LILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL 712

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
                    Y   V GL   G ++ A     +M+  G LP    C SL+    + G   E
Sbjct: 713 RSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGE 772

Query: 239 AIELQNEMM 247
           A  +  E+M
Sbjct: 773 ARAVLEEIM 781



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 10/236 (4%)

Query: 12  LYGTIIWGLC-IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           L+ ++I G C +   FE  K+    + E   +    +   L+D+  K  E      ++  
Sbjct: 12  LFTSVIQGWCNVGRTFEAVKIF--SLMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQV 69

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M+D        TF  ++ GLCK+G + EA      M    + P  A  + L   LC +  
Sbjct: 70  MVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGS 129

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +ERA  L + MP    + +++AY  ++    K     +AL L   M+E  + L   +  S
Sbjct: 130 MERAFQLLEIMP----VANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDS 185

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           ++ GL   G + EA  ++ E       P  +    LL+    RG +D+A EL   M
Sbjct: 186 VLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARELLRAM 238



 Score = 38.1 bits (87), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 1/109 (0%)

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M ++ + P    +T++I G+       EA+ + + M E       + Y  L+  LS+   
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYP-DVYNVLIDSLSKRQE 59

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            +  + +   M+ RG  PD     ++L    + G MDEA  + +EM  R
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSR 108


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  127 bits (318), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 124/252 (49%), Gaps = 3/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++ + D  +Y T+I GLC   K   +  LL  M  NG  A+ V  TTL+D   K+G+
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +LL +M D+     VVT+  LIDGLCK+    +AI    RM   G  P++  Y +
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 121 LIDGLCKKNCIERARNLFDE-MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI GLC  N ++ A  +  E M +   IPD   Y   I G  K     + L +   M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDE 238
           G+  D+  + S++ GL +   + +A  +F  M+ RG +PD  L  S++  +  R N +D 
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDS-LTYSIMLDNLSRANRLDT 239

Query: 239 AIELQNEMMGRG 250
             E+   M+  G
Sbjct: 240 VEEVLEHMVKSG 251



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 102/213 (47%), Gaps = 1/213 (0%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +  I  TL+    KA +P  AL LL  M  +  + +VVT+  LIDGLCKSG +  A    
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            +M D G  PNV  YTALIDGLCK      A      M +    PD   Y +LI G    
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 164 ESFKEA-LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               +A L L+  M E G   D+  Y + + GL + G L +   +  EM   GI PD + 
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             S++    +   +D+A ++   M+ RG +  S
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDS 221



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 119/243 (48%), Gaps = 1/243 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSE-MKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           DL  Y ++I GLC+ ++ +D+ L+L E M E+G   + V   T +    KAG+  + L +
Sbjct: 114 DLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEM 173

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L+EM    I   VVTFC +I GLCK+  + +A   F  M + G  P+   Y+ ++D L +
Sbjct: 174 LEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSR 233

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
            N ++    + + M K      +  Y  LI   ++    + A     +  E G  +++  
Sbjct: 234 ANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYT 293

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + + +  L R G    A+ +   MI  G LP+ +    ++    + GN+D+A +L  +M+
Sbjct: 294 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 353

Query: 248 GRG 250
             G
Sbjct: 354 DSG 356



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 2/247 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+  + +II GLC  ++ +D+  +   M E G   +++  + ++D   +A       
Sbjct: 182 ISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVE 241

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +L+ M+ S       T+  LI  L ++G +  A   + +  + G    V  + A I  L
Sbjct: 242 EVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGAL 301

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG-VDLD 184
           C+      A+N+   M +   +P+  +Y  +IDG  K  +  +A  L  +M + G    D
Sbjct: 302 CRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPD 361

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI-LPDEILCISLLKKHYERGNMDEAIELQ 243
           +  + +L+ G  + G L +A+ L  EM  + I +PD +   +++    + G++ +A  L 
Sbjct: 362 VIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLL 421

Query: 244 NEMMGRG 250
            EM   G
Sbjct: 422 EEMQAVG 428



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 1/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T I GLC   K +    +L EM   G++ + V   +++    KA    +A  + 
Sbjct: 150 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVF 209

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             ML+       +T+ +++D L ++  +    +    M   G +   A Y  LI  L + 
Sbjct: 210 KGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRA 269

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             IE A   +++  +   + +   + A I    +   F  A N+   M E G   +L +Y
Sbjct: 270 GDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSY 329

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGIL-PDEILCISLLKKHYERGNMDEAIELQNEMM 247
             ++ GL + G++ +A  L  +M+  G   PD I   +L+    + G + +A +L  EM 
Sbjct: 330 NFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMK 389

Query: 248 GRGL 251
            + +
Sbjct: 390 AKNI 393


>gi|341606817|gb|AEK83511.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 208

 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 103/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+     +  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 5   MDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGX 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT  V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 65  VEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAXTKHGKVDEAMTLFKRMEEEE 184

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 185 GCDQXVYTYTILISGMFK 202



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 87/180 (48%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  
Sbjct: 1   LYQEMDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +E A  L   M      PD    + +++G  K+   +EAL+        G+ ++  
Sbjct: 61  KSGXVEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 120

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L   M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAXTKHGKVDEAMTLFKRM 180



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 86/180 (47%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+       + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 1   LYQEMDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V   + +++GLCK   +E A + F       +  ++ 
Sbjct: 61  KSGXVEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+   ++ G + EA  LF  M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAXTKHGKVDEAMTLFKRM 180



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 73/148 (49%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+      ++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 2   YQEMDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               ++A+ L +RM + G   D+   + +V GL + G ++EA   F      G+  + + 
Sbjct: 62  SGXVEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMF 121

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 122 YSSLIDGLGKAGRIDEAERLFEEMSEKG 149


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 125/245 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++  +  + T+I GL    KF  +  L  +M   G   +    TT+++   K GE + A 
Sbjct: 41  LQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAA 100

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  +M ++  ++ VVT+  LI  LCK   V EA+D F  M    + P +  YT+LI GL
Sbjct: 101 GLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGL 160

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  +  + A  L +EM   +++P+   +  L+D + K      A  +   MTE+GV+ D+
Sbjct: 161 CNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDV 220

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL++G S    + EAR LF  MI +G  PD      L+  + +   +DEA +L NE
Sbjct: 221 VTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNE 280

Query: 246 MMGRG 250
           M+ +G
Sbjct: 281 MIHQG 285



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 111/234 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I  LC   +  ++  + S MK   ++      T+L+          EA +LL+EM 
Sbjct: 118 YSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMT 177

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   VVTF VL+D  CK G V  A      M + G+ P+V  Y +L+ G      + 
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR LFD M  +   PD  +Y+ LI+GY K +   EA  L N M   G   +  +Y +L+
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL + G L+EA+ LF  M   G LP+      LL    ++G + +A  L   M
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAM 351



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K+I   +  Y ++I GLC  S+++++  LL+EM    +  N V    L+D + K G+
Sbjct: 141 MKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGK 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +L  M +  +E  VVT+  L+ G      V EA   F  M   G  P+V  Y+ 
Sbjct: 201 VLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSI 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   I+ A+ LF+EM  +   P+  +Y  LI G  +    +EA +L   M   G
Sbjct: 261 LINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNG 320

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y  L+ G  + G+L +A  LF  M    + P+ ++   L+    + GN+ +A 
Sbjct: 321 NLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDAR 380

Query: 241 ELQNEMMGRGL 251
           EL +E+   GL
Sbjct: 381 ELFSELFVIGL 391



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 121/248 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  Y ++++G  + ++  +++ L   M   G   +    + L++ Y KA    EA 
Sbjct: 216 VEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAK 275

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +EM+        V++  LI GLC+ G +REA D F  M   G  PN+  Y  L+DG 
Sbjct: 276 QLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGF 335

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  + +A  LF  M    + P+   Y  L++   K  + K+A  L + +  +G+  ++
Sbjct: 336 CKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNV 395

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+++ GL + G L EA   F  M   G  PDE     +++   +  +   A+ L  E
Sbjct: 396 QIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGE 455

Query: 246 MMGRGLLS 253
           M  RG ++
Sbjct: 456 MRDRGFIT 463



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 114/250 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + D   Y TII GLC   +   +  L  +M+E G   N V  +TL+ +  K   
Sbjct: 71  MVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRR 130

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL +   M    I  T+ T+  LI GLC     +EA      M    + PNV  +  
Sbjct: 131 VNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNV 190

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D  CK+  +  A  +   M +  + PD   Y +L+ GY       EA  L + M   G
Sbjct: 191 LVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKG 250

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ +Y+ L+ G  +   + EA+ LF+EMI +G  P+ +   +L+    + G + EA 
Sbjct: 251 CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQ 310

Query: 241 ELQNEMMGRG 250
           +L   M   G
Sbjct: 311 DLFKNMHTNG 320



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 4/221 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  Y  +I G C   + +++K L +EM   G T N V   TL+    + G 
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGR 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L   M  +     + T+ +L+DG CK G + +A   F  M    L PN+ +Y  
Sbjct: 306 LREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNI 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++ +CK   ++ AR LF E+    + P+   YT +I+G  K     EAL     M + G
Sbjct: 366 LVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDG 425

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARV--LFHEMIGRGILPD 219
              D  +Y  ++ G  +  H  E+R   L  EM  RG + D
Sbjct: 426 CPPDEFSYNVIIRGFLQ--HKDESRAVHLIGEMRDRGFITD 464



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 73/165 (44%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           T  +LI+  C+   V        +    GL P +  +T LI+GL K     +A  LFD+M
Sbjct: 12  TLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDM 71

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
             R   PD   YT +I+G  K      A  L  +M E G  L++  Y++L+  L +   +
Sbjct: 72  VARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRV 131

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            EA  +F  M  + I P      SL++         EA  L NEM
Sbjct: 132 NEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEM 176



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 64/140 (45%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           GL PN      LI+  C+   ++   ++  +  K  + P    +T LI+G  K   F +A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           + L + M   G   D   YT+++ GL + G    A  LF +M   G   + +   +L+  
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 230 HYERGNMDEAIELQNEMMGR 249
             +   ++EA+++ + M  +
Sbjct: 125 LCKYRRVNEALDIFSYMKAK 144


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  127 bits (318), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 121/242 (50%), Gaps = 6/242 (2%)

Query: 15  TIIWGLCIESKFEDSKLLLSEM--KENGL-TANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            +I GLC E +  ++  L  EM  +E+G    + V  T L+D + K+G   +A+ +L  M
Sbjct: 156 ALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVM 215

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
              +    VVT+  L+ GLCK+G + +A+D F RM   G  PNV  YT LI GLC  + +
Sbjct: 216 EGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKV 275

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + AR L DEM       DT +Y AL+DGY +    +EA  L   M       D   YT L
Sbjct: 276 DAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCL 335

Query: 192 VWGLSRCGHLQEARVLFHEM-IGRGILPDEILCISLLKKHYERGN-MDEAIELQNEMMGR 249
           V G      L+EAR L   M    GI PD ++  S++   Y R     EA E   EM+ R
Sbjct: 336 VRGFCNASRLEEARFLLENMKTAAGIDPD-VVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 394

Query: 250 GL 251
            +
Sbjct: 395 NV 396



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 122/247 (49%), Gaps = 3/247 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y +++ GLC + K + +  ++ EMK  G+  +    + L+  +  A +  EAL L 
Sbjct: 80  DVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLY 139

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP---DFGLHPNVAVYTALIDGL 125
            E+L S   +  V+   LI GLC+   + EA + F  M    D    P+V  YTALIDG 
Sbjct: 140 KEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGF 199

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +E+A  +   M  R  +P+   Y++L+ G  K     +AL+L  RMT  G   ++
Sbjct: 200 CKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV 259

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+ GL     +  AR+L  EM       D +   +LL  +   G ++EA +L  E
Sbjct: 260 VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKE 319

Query: 246 MMGRGLL 252
           M  +  L
Sbjct: 320 MAAKSCL 326



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 122/248 (49%), Gaps = 4/248 (1%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEP 61
           GK++  DL  Y T+I G C + + + +  +L EM   +G+  + V  T+++D   + G+ 
Sbjct: 38  GKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKM 97

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
             A  ++ EM    +E    TF  LI G C +  V EA+  +  +       +    +AL
Sbjct: 98  DRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSAL 157

Query: 122 IDGLCKKNCIERARNLFDEMPKRD---MIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           I GLC++  I  A  LF EM  R+     PD   YTALIDG+ K  + ++A+ +   M  
Sbjct: 158 ITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG 217

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
                ++  Y+SL+ GL + G L +A  LF  M  +G +P+ +   +L+        +D 
Sbjct: 218 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 277

Query: 239 AIELQNEM 246
           A  L +EM
Sbjct: 278 ARLLMDEM 285



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 120/291 (41%), Gaps = 40/291 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  Y T+I GLC   K + ++LL+ EM      A+TV    L+D Y + G 
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 61  PSEALSLLDEM-----LDSRIEVT-------------------------------VVTFC 84
             EA  L  EM     L  RI  T                               VVT+ 
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +++ G  ++    EA ++   M    + PN   Y++LIDGLCK   +  A  +   + K 
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK- 428

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PD   YT +I+G    +  +EAL L   M    V+  +  + S++  L R G + EA
Sbjct: 429 ---PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             L   M   G+ P  +   +LL+     G M+ A EL   M  +   S S
Sbjct: 486 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSS 536



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 116/286 (40%), Gaps = 32/286 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G+    ++  Y +++ GLC     + +  L   M   G   N V  TTL+     A +
Sbjct: 215 MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHK 274

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+DEM  +      V++  L+DG C+ G + EA   F  M      P+   YT 
Sbjct: 275 VDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTC 334

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L+ G C  + +E AR L + M     I PD   Y+ ++ GY + + F EA      M   
Sbjct: 335 LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 394

Query: 180 GVDLDLNAYTSLVWGLSRCGHL-------------------------------QEARVLF 208
            V  +   Y+SL+ GL + G +                               +EA  L 
Sbjct: 395 NVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLL 454

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
            EM+ + + P      S++      G+MDEA +L   M   GL  G
Sbjct: 455 EEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 500



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 5/204 (2%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           +++   KA   S+A  +L EM D + +   +VT+  +I+G CK G +  A +    M   
Sbjct: 15  VVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTR 74

Query: 110 -GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            G+ P+V  YT+++DGLC+   ++RA  +  EM  + + PD   ++ALI G+       E
Sbjct: 75  DGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDE 134

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR---GILPDEILCIS 225
           AL L   +      LD  + ++L+ GL R   + EA  LF EM  R      PD +   +
Sbjct: 135 ALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTA 194

Query: 226 LLKKHYERGNMDEAIELQNEMMGR 249
           L+    + GN+++A+++   M GR
Sbjct: 195 LIDGFCKSGNLEKAMKMLGVMEGR 218



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 125/295 (42%), Gaps = 49/295 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMK-ENGLTANTVICTTLMDAYFKAG 59
           M  K+   D   Y  ++ G C  S+ E+++ LL  MK   G+  + V  + ++  Y +A 
Sbjct: 320 MAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 379

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA   + EM+   +    VT+  LIDGLCK+G V  A++    +      P+V  YT
Sbjct: 380 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD----KPDVVTYT 435

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDT----------------------------- 150
            +I+GLC  +  E A  L +EM  + + P                               
Sbjct: 436 IVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAH 495

Query: 151 ------TAYTALIDGY-------LKHESFKEALNLKNRMTEVGVDL-DLNAYTSLVWGLS 196
                   YT L++G+       + +E F E +  K + +    +L    A+++L+ GL 
Sbjct: 496 GLEPGMVTYTTLLEGFSRTGRMEIAYELF-EVMRRKAKKSSSAANLVPEQAFSALIRGLC 554

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   + +A  +  E+  R   P E  C++++      G  +EA +L N +   GL
Sbjct: 555 KAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 2/170 (1%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPD-FGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           T+ V+++GLCK+ L  +A +    M D   + P++  Y+ +I+G CK+  ++RA  +  E
Sbjct: 11  TYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILRE 70

Query: 141 MPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           M  RD M PD   YT+++DG  +      A  +   M   GV+ D   +++L+ G     
Sbjct: 71  MVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            + EA  L+ E++      D +   +L+        + EA EL  EM  R
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 3/144 (2%)

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHE 164
           M +F + PN   Y  +++GLCK     +A  +  EM   + + PD   Y+ +I+G+ K  
Sbjct: 1   MREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG 59

Query: 165 SFKEALN-LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               A   L+  +T  G+  D+  YTS+V GL R G +  A  +  EM  +G+ PD+   
Sbjct: 60  EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 119

Query: 224 ISLLKKHYERGNMDEAIELQNEMM 247
            +L+        +DEA++L  E++
Sbjct: 120 SALITGWCNARKVDEALKLYKEIL 143



 Score = 43.5 bits (101), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTE-VGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           P+   Y  +++G  K     +A  +   M +   V  DL  Y++++ G  + G +  A  
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 207 LFHEMIGR-GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  EM+ R G+ PD +   S++      G MD A E+  EM  +G+
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGV 112


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+     +  Y TI++ LC   +  D++  L  M    L  + V   TL+  Y + G 
Sbjct: 303 MLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGN 362

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EAL L  E+    +  +VVT+  LIDG C++G +  A      M   GL P+V  +T 
Sbjct: 363 FAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTI 422

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+   +  A+ LFDEM  R + PD  AYT  I G LK  +  +A  +K  M   G
Sbjct: 423 LVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEG 482

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL  Y  L+ GL + G+  +A  L  +M   GI+PD +   S++  H   G + +A 
Sbjct: 483 FPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAE 542

Query: 241 ELQNEMMGRGL 251
           E+ ++M+ +G+
Sbjct: 543 EVFSDMLKKGI 553



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +++  DL  Y T+I+G      F ++ LL SE++   L  + V   TL+D   + G 
Sbjct: 338 MVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGN 397

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + D+M+   +   VVTF +L+ G C+ G +  A + F  M   GL P+   YT 
Sbjct: 398 LDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTT 457

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  K     +A  + +EM      PD   Y  LI+G  K  +F +A  L  +M   G
Sbjct: 458 RIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEG 517

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YTS++      G L++A  +F +M+ +GI P  +    L+  +  RG +D A 
Sbjct: 518 IVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAK 577

Query: 241 ELQNEMMGRGL 251
           +  +EM  +G+
Sbjct: 578 KYFDEMQDKGV 588



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 105/197 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    DL  Y  +I GLC    F+D+  L+ +M+  G+  + V  T+++ A+  +G 
Sbjct: 478 MKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGL 537

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +  +ML   I  +VVT+ VLI      G +  A  YF  M D G+ PNV  Y A
Sbjct: 538 LRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNA 597

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK+N ++ A NLF EM  + + P+   YT LI+     + +++AL L   M +  
Sbjct: 598 LIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDRE 657

Query: 181 VDLDLNAYTSLVWGLSR 197
           +  D   +++L+  LS+
Sbjct: 658 IKPDSCTHSALMKHLSK 674



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 118/247 (47%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
            I+  +  + T++   C E +   +  +L  M+  G   N V    L++     GE   A
Sbjct: 202 QIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRA 261

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             L+++M    ++V+  T+  LI G CK  +  EA D    M   G  P V  Y  ++  
Sbjct: 262 KELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYS 321

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC+   +  AR   D M   D++PD  +Y  LI GY +  +F EAL L + +    +   
Sbjct: 322 LCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPS 381

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y +L+ G  R G+L  A+ +  +MI  G+ PD +    L++   + GN+  A EL +
Sbjct: 382 VVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFD 441

Query: 245 EMMGRGL 251
           EM+ RGL
Sbjct: 442 EMLSRGL 448



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 115/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GL  + +F+ +K L+ +M   GL  +      L+  + K     EA  L  EML
Sbjct: 245 YNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREML 304

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 TVVT+  ++  LC+ G V +A  Y   M +  L P++  Y  LI G  +     
Sbjct: 305 GRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFA 364

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF E+  ++++P    Y  LIDG  +  +   A  +K+ M + G+  D+  +T LV
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G+L  A+ LF EM+ RG+ PD I   + +    + GN  +A  ++ EM   G 
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGF 483



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 116/252 (46%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+N +  + L   +I     +   E   ++  +M  NGL  +   C  ++         +
Sbjct: 130 GRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVN 189

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           E   +   M+  +I  T+VTF  ++D  CK G V  A++    M  FG  PN   Y  L+
Sbjct: 190 EVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLV 249

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +GL  K   +RA+ L ++M    +      Y  LI G+ K E F+EA +L+  M   G  
Sbjct: 250 NGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGAL 309

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             +  Y ++++ L R G + +AR     M+   ++PD +   +L+  +   GN  EA+ L
Sbjct: 310 PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLL 369

Query: 243 QNEMMGRGLLSG 254
            +E+  + L+  
Sbjct: 370 FSELRSKNLVPS 381



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 115/271 (42%), Gaps = 35/271 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +  ++ G C       +K L  EM   GL  + +  TT +    K G PS+A  + 
Sbjct: 416 DVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMK 475

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCK-----------------------------------S 93
           +EM        ++T+ VLI+GLCK                                   S
Sbjct: 476 EEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLIS 535

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           GL+R+A + F  M   G+HP+V  YT LI     +  ++ A+  FDEM  + + P+   Y
Sbjct: 536 GLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITY 595

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
            ALI G  K      A NL   M   GV  +   YT L+   S   + Q+A  L+ +M+ 
Sbjct: 596 NALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLD 655

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQN 244
           R I PD     +L+K   +   +   + L+N
Sbjct: 656 REIKPDSCTHSALMKHLSKDYKLLAVLRLEN 686


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y +II  LC     + ++L+L +M  NG   N V    ++  Y  +G+
Sbjct: 253 MMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQ 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   +  EM    +   +VT    +  LCK G  +EA ++F  M   G  PN+  Y+ 
Sbjct: 313 WKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSV 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   + C     NLF+ M    ++ D   +  +ID Y K     E + +  +M E G
Sbjct: 373 LLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQG 432

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y  ++   SR G L +A   F++MI  G+ P+ I+  SL++     GN+ +A 
Sbjct: 433 VIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAK 492

Query: 241 ELQNEMMGRGL 251
           EL +EMM RG+
Sbjct: 493 ELVSEMMSRGI 503



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 2/228 (0%)

Query: 31  LLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR--IEVTVVTFCVLID 88
           LLL  M E G+  +T+   T++    +      AL LL  M+         VVT+  +I 
Sbjct: 176 LLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIH 235

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           GL + G V +A + F  M   G+ P+V  YT++ID LCK   +++A  +  +M      P
Sbjct: 236 GLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQP 295

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   Y  +I GY     +KE   +   MT  G+  ++    S +  L + G  +EA   F
Sbjct: 296 NKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFF 355

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
             M  +G  P+ +    LL  +   G   + + L N M G G+++  +
Sbjct: 356 DSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQR 403



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLT-ANTVICTTLMDAYFKAG 59
           M    +K +  +Y ++I G C+      +K L+SEM   G+   N V   +++++  K G
Sbjct: 463 MIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEG 522

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA  + D ++       V+TF  LIDG    G + +A      M   G+ P+V  Y 
Sbjct: 523 RVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYN 582

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LIDG C+   I+    LF EM  + + P T  Y  ++ G         A  + + M E 
Sbjct: 583 TLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G  +D++    ++ GL R     EA  +F ++    +  +  +  +++   Y+    +EA
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702

Query: 240 IELQNEMMGRGLLSGS 255
            EL + +   GL+  +
Sbjct: 703 KELFDSISATGLVPNA 718



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 87/180 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ D+  Y T+I G C   + +D  +L  EM   G+   T+    ++   F  G 
Sbjct: 569 MISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGR 628

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  EM++S   + + T  +++ GLC++    EAI  F ++    +  N+A+   
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINT 688

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID + K    E A+ LFD +    ++P+ + Y  +I   LK  S +EA N+ + M + G
Sbjct: 689 MIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSG 748



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 117/250 (46%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + +II  LC E +  ++  +   +   G   + +   +L+D Y   G+  +A  
Sbjct: 505 RPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFG 564

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +LD M+ + IE  VV++  LIDG C++G + + +  FG M   G+ P    Y  ++ GL 
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLF 624

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A+ +  EM +     D +    ++ G  ++    EA+ +  ++  + V  ++ 
Sbjct: 625 NDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIA 684

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
              +++  + +    +EA+ LF  +   G++P+      ++K   + G+++EA  + + M
Sbjct: 685 IINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLM 744

Query: 247 MGRGLLSGSK 256
              G    S+
Sbjct: 745 EKSGCAPSSR 754



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 98/199 (49%), Gaps = 8/199 (4%)

Query: 61  PSEALSLLDEML--DSRIEV---TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
           PS A++L + +   ++R  V   TV T+ +L+D  C++         FGR    GL  +V
Sbjct: 95  PSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDV 154

Query: 116 AVYTALIDGLCKKNCIERARN-LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
            V + L+  L      +   N L   MP+  + PDT +Y  ++    +    + AL+L +
Sbjct: 155 IVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLH 214

Query: 175 RMTEV--GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            M +   G   ++  Y +++ GL R G + +A  LFHEM+ +G++PD +   S++    +
Sbjct: 215 TMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCK 274

Query: 233 RGNMDEAIELQNEMMGRGL 251
              MD+A  +  +M+  G 
Sbjct: 275 ARAMDKAELVLRQMISNGF 293



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 87/203 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K     YG I+ GL  + +   +K +  EM E+G T +   C  ++    +   
Sbjct: 604 MLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNC 663

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+++  ++    ++  +     +ID + K     EA + F  +   GL PN + Y  
Sbjct: 664 DDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGV 723

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L K+  +E A N+F  M K    P +     +I   L+     +A N   ++    
Sbjct: 724 MIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKR 783

Query: 181 VDLDLNAYTSLVWGLSRCGHLQE 203
           + L+ +  + L+   SR G   E
Sbjct: 784 ISLEASTVSLLMALFSREGKYWE 806


>gi|341606819|gb|AEK83512.1| pentatricopeptide repeat superfamily protein [Capsella rubella]
          Length = 208

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/198 (37%), Positives = 103/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+     +  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 5   MDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGX 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT  V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 65  VEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSS 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 125 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAXTKHGKVDEAMTLFKRMEEEE 184

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 185 GCDQTVYTYTILISGMFK 202



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 87/180 (48%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  
Sbjct: 1   LYQEMDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +E A  L   M      PD    + +++G  K+   +EAL+        G+ ++  
Sbjct: 61  KSGXVEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 120

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L   M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAXTKHGKVDEAMTLFKRM 180



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 86/180 (47%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+       + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 1   LYQEMDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V   + +++GLCK   +E A + F       +  ++ 
Sbjct: 61  KSGXVEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSM 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+   ++ G + EA  LF  M
Sbjct: 121 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAXTKHGKVDEAMTLFKRM 180



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 73/148 (49%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+      ++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 2   YQEMDEKGIQVPPHXFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               ++A+ L +RM + G   D+   + +V GL + G ++EA   F      G+  + + 
Sbjct: 62  SGXVEDAIRLLHRMIDEGFKPDVVTXSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMF 121

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 122 YSSLIDGLGKAGRIDEAERLFEEMSEKG 149


>gi|8778411|gb|AAF79419.1|AC025808_1 F18O14.1 [Arabidopsis thaliana]
          Length = 689

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 125/243 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G  +    E    +L  M E G++ N V  T+L+  Y K G   EA  + + + 
Sbjct: 49  YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 108

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + ++      + VL+DG C++G +R+A+     M + G+  N  +  +LI+G CK   + 
Sbjct: 109 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 168

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F  M    + PD   Y  L+DGY +     EAL L ++M +  V   +  Y  L+
Sbjct: 169 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 228

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G SR G   +   L+  M+ RG+  DEI C +LL+  ++ G+ +EA++L   ++ RGLL
Sbjct: 229 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 288

Query: 253 SGS 255
           + +
Sbjct: 289 TDT 291



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 117/221 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  Y ++I G C +   E+++ +   +KE  L A+  +   LMD Y + G+
Sbjct: 72  MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 131

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + D M++  +         LI+G CKSG + EA   F RM D+ L P+   Y  
Sbjct: 132 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 191

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C+   ++ A  L D+M +++++P    Y  L+ GY +  +F + L+L   M + G
Sbjct: 192 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 251

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           V+ D  + ++L+  L + G   EA  L+  ++ RG+L D I
Sbjct: 252 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTI 292



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 8/261 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ + +   +  YG +I G C     + +     EM E G+T N  IC+ + ++ F+  +
Sbjct: 387 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDK 446

Query: 61  PSEALSLLDEMLDSRIEV----TVVTFCVLIDGLC-KSGLVREAIDYFGRMPDFGLHPNV 115
             EA  LL +++D  + +    ++  F       C K+  + E+++     P   L PN 
Sbjct: 447 IDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVE--NSTPKKLLVPNN 504

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKN 174
            VY   I GLCK   +E AR LF ++   D  IPD   YT LI G        +A  L++
Sbjct: 505 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRD 564

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M   G+  ++  Y +L+ GL + G++  A+ L H++  +GI P+ I   +L+    + G
Sbjct: 565 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 624

Query: 235 NMDEAIELQNEMMGRGLLSGS 255
           N+ EA+ L+ +M+ +GL+ GS
Sbjct: 625 NVAEAMRLKEKMIEKGLVRGS 645



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 113/252 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +   +  Y  ++ G      F D   L   M + G+ A+ + C+TL++A FK G+
Sbjct: 212 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGD 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA+ L + +L   +    +T  V+I GLCK   V EA +    +  F   P V  Y A
Sbjct: 272 FNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQA 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L  G  K   ++ A  + + M ++ + P    Y  LI G  K+    +  +L   +   G
Sbjct: 332 LSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARG 391

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +L+ G    G + +A     EMI +GI  +  +C  +    +    +DEA 
Sbjct: 392 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEAC 451

Query: 241 ELQNEMMGRGLL 252
            L  +++   LL
Sbjct: 452 LLLQKIVDFDLL 463



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICT----------- 49
           +K K + AD  +YG ++ G C   +  D+  +   M E G+  NT IC            
Sbjct: 107 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 166

Query: 50  ------------------------TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                                   TL+D Y +AG   EAL L D+M    +  TV+T+ +
Sbjct: 167 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 226

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+ G  + G   + +  +  M   G++ +    + L++ L K      A  L++ +  R 
Sbjct: 227 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 286

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++ DT     +I G  K E   EA  + + +        +  Y +L  G  + G+L+EA 
Sbjct: 287 LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF 346

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   M  +GI P   +  +L+   ++  ++++  +L  E+  RGL
Sbjct: 347 AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGL 392


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K D+  Y  +I G+C E + +++   L+ M   G   N +    ++ +    G 
Sbjct: 273 MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGR 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A   L EM+      +VVTF +LI+ LC+ GL+  AID   +MP  G  PN   Y  
Sbjct: 333 WMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNP 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+  LCK   +ERA    D M  R   PD   Y  L+    K      A+ + N++   G
Sbjct: 393 LLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG 452

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L  Y +++ GLS+ G   +A  L  EM G+G+ PD I   +L+      G +DEAI
Sbjct: 453 CSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAI 512

Query: 241 ELQNEMMGRGL 251
              +++   G+
Sbjct: 513 AFFHDLEEMGV 523



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 130/282 (46%), Gaps = 35/282 (12%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  Y TI+  LC   K +++  +L    +     + +  T L++A  K     +A
Sbjct: 207 SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQA 266

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN---------- 114
           + LLDEM D   +  VVT+ VLI+G+CK G + EAI +   MP +G  PN          
Sbjct: 267 MKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRS 326

Query: 115 -------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
                                    V  +  LI+ LC+K  I RA ++ ++MP+    P+
Sbjct: 327 MCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPN 386

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
           + +Y  L+    K +  + A+   + M   G   D+  Y +L+  L + G +  A  + +
Sbjct: 387 SLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 446

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           ++  +G  P  I   +++    + G  D+AI+L +EM G+GL
Sbjct: 447 QLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGL 488



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 3/241 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++I GLC   K   +  ++  ++++G   + +    L+  Y K GE   AL LLD M   
Sbjct: 150 SLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM--- 206

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +   VVT+  ++  LC SG ++EA++   R      +P+V  YT LI+  CK++ + +A
Sbjct: 207 SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQA 266

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L DEM  +   PD   Y  LI+G  K     EA+   N M   G   ++  +  ++  
Sbjct: 267 MKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRS 326

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           +   G   +A     EMI +G  P  +    L+     +G +  AI++  +M   G    
Sbjct: 327 MCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPN 386

Query: 255 S 255
           S
Sbjct: 387 S 387



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 116/255 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K     +  +  +I  LC +     +  +L +M ++G T N++    L+ A  K  +
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKK 402

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+  LD M+       +VT+  L+  LCK G V  A++   ++   G  P +  Y  
Sbjct: 403 MERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNT 462

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGL K    + A  L DEM  + + PD   Y+ L+ G  +     EA+   + + E+G
Sbjct: 463 VIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMG 522

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y S++ GL +      A      M+ RG  P E   + L++     G   EA+
Sbjct: 523 VKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEAL 582

Query: 241 ELQNEMMGRGLLSGS 255
           EL NE+  RG++  S
Sbjct: 583 ELLNELCSRGVVKKS 597



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 3/226 (1%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + E+    L +M   G   + + CT+L+    K G+  +A  +++ + DS     V+T+ 
Sbjct: 125 ELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYN 184

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VLI G CK+G +  A+    RM    + P+V  Y  ++  LC    ++ A  + D   +R
Sbjct: 185 VLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQR 241

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           +  PD   YT LI+   K     +A+ L + M + G   D+  Y  L+ G+ + G L EA
Sbjct: 242 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEA 301

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               + M   G  P+ I    +L+     G   +A +   EM+ +G
Sbjct: 302 IRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 85/195 (43%), Gaps = 5/195 (2%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCV-LIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
           + GE  E    L++M+  R ++  +  C  LI GLCK+G   +A      + D G  P+V
Sbjct: 122 RNGELEEGFKFLEDMV-CRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDV 180

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             Y  LI G CK   I  A  L D M    + PD   Y  ++         KEA+ + +R
Sbjct: 181 ITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
             +     D+  YT L+    +   + +A  L  EM  +G  PD +    L+    + G 
Sbjct: 238 QMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGR 297

Query: 236 MDEAIELQNEMMGRG 250
           +DEAI   N M   G
Sbjct: 298 LDEAIRFLNHMPSYG 312



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 73/145 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GL    K +D+  LL EMK  GL  + +  +TL+    + G+  EA++   ++ 
Sbjct: 460 YNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLE 519

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  ++   +T+  ++ GLCK+     AID+   M   G  P    Y  LI+GL  +   +
Sbjct: 520 EMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAK 579

Query: 133 RARNLFDEMPKRDMIPDTTAYTALI 157
            A  L +E+  R ++  ++A   ++
Sbjct: 580 EALELLNELCSRGVVKKSSAEQVVV 604



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 3/161 (1%)

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L ++G + E   +   M   G  P++   T+LI GLCK     +A  + + +     +PD
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  LI GY K      AL L +RM+   V  D+  Y +++  L   G L+EA  +  
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLD 236

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             + R   PD I    L++   +   + +A++L +EM  +G
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKG 277


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 121/229 (52%), Gaps = 2/229 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG  +K D   Y  +I G     K E +  L   M E+G++ N V  T ++D YF   +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  +M++S    +  T+ V+I G  K+  + EA ++ G+M   GL PNV  YT+
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA--LNLKNRMTE 178
            IDGLC+      A  +F EM KR+  P+   Y++LI G  +    ++A   NL  R+T 
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            G + +++ YT+LV GL   G   EA  L   M  +G+ P E +  +LL
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C     + +  +   M ++G   N+V  +TL++     G   EA+ +L+EM+
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              IE TV T+ + +  LC +G   EA++  G+M   G  PN+  +TALI GL +    E
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L+ +M    ++P T  Y ALI+       F+ A  +   M   G       Y  ++
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                 G +Q+A V+F +M+  G  P+ I   +L+  + ++GN++ A+ L   M G GL
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL 478



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 123/279 (44%), Gaps = 35/279 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC E + E++  +L EM + G+       T  + +   AG  SEA+ LL +M 
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC------ 126
                  + TF  LI GL + G    AI  + +M   GL P    Y ALI+ LC      
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394

Query: 127 -------------------------KKNC----IERARNLFDEMPKRDMIPDTTAYTALI 157
                                    K  C    I++A  +FD+M K    P+   Y  LI
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLI 454

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            GY K  +   A+ L   M   G+  D   YT L+ G SR G L+ A  LF+ M+  GI 
Sbjct: 455 YGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGIS 514

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           P+ +   +++  ++    +D+A+ L  +M+  G L  S+
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 111/237 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC+E +FE +  +   M  +G   +T     ++  +   G+  +A+ + D+ML
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +     V+T+  LI G CK G +  A+     M   GL P+   YT LI G  +   +E
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +LF  M +  + P+   YTA+IDGY       +AL L  +M E G       Y  ++
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            G S+   + EA     +M+ +G+LP+ I   S +      G    A ++ +EM  R
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 108/227 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II   C+    + + ++  +M + G + N +   TL+  Y K G  + A+ LL+ M 
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + ++    T+  LI G  + G +  A   F  M + G+ PN   YTA+IDG      ++
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M +   +P +  Y  +I G+ K  S  EA N   +M + G+  ++  YTS +
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            GL R G    A  +FHEM  R   P+     SL+    + G  ++A
Sbjct: 595 DGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 2/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G    +   +++    +M + GL  N +  T+ +D   + G    A  +  EM 
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDY--FGRMPDFGLHPNVAVYTALIDGLCKKNC 130
                  + T+  LI GLC+ G   +A  Y    R+  +G  PNV  YT L+ GLC +  
Sbjct: 615 KRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR 674

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A  L   M K+ + P    Y AL+ G  K+   + ALN+   M  +G  L L+ Y +
Sbjct: 675 CYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKA 734

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           L+  L +   ++EA+ +F  M+ +    DE+    LL    + G  D  ++L + M  R
Sbjct: 735 LICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESR 793



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 113/252 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    ++  +  +I GL  + KFE +  L  +M  +GL   TV    L++     G 
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++   ML      +  T+  +I   C  G +++A+  F +M   G  PNV  Y  
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+  +  A  L + M    + PD   YT LI G+ +    + A +L   M E G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+++ G      + +A  LF +M+  G LP       ++    +  ++ EA 
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 241 ELQNEMMGRGLL 252
               +M+ +GLL
Sbjct: 573 NFCGKMVKQGLL 584



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 5/227 (2%)

Query: 30  KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG 89
           K+L S ++ + LT NT+I     +   K G   EA  ++  +          T+  LI G
Sbjct: 192 KMLNSGIRPSLLTFNTMI-----NILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILG 246

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
            C++  +  A   F RM   G  PN   Y+ LI+GLC +  +E A ++ +EM ++ + P 
Sbjct: 247 HCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPT 306

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              YT  +          EA+ L  +M + G   ++  +T+L+ GLSR G  + A  L+H
Sbjct: 307 VYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYH 366

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           +M+  G++P  +   +L+ +    G  + A  +   M+  G L  ++
Sbjct: 367 KMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ 413



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 2/198 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL--LLSEMKENGLTANTVICTTLMDAYFKA 58
           M+ +N   +L  Y ++I+GLC E + ED+++  LL+ +   G   N    TTL+      
Sbjct: 613 MEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGE 672

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G   EA  L+  M    ++ +   +  L+ G CK+  V  A++ F  M   G   +++ Y
Sbjct: 673 GRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDY 732

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            ALI  LCK+N IE A+ +F  M ++    D  A+T L+DG LK       L L + M  
Sbjct: 733 KALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMES 792

Query: 179 VGVDLDLNAYTSLVWGLS 196
               L+   Y  L   LS
Sbjct: 793 RNCTLNFQTYVMLARELS 810



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 3/194 (1%)

Query: 59  GEPSEALSLLDEMLDSRIEV--TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           GE       L E ++S+ +   T+ +F  L+  L K  +V  A D + +M + G+ P++ 
Sbjct: 145 GEVKRVTQFLSE-INSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLL 203

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +  +I+ LCKK  ++ A+ +   + + D  P+   YT+LI G+ ++ +   A  + +RM
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            + G D +   Y++L+ GL   G L+EA  +  EM+ +GI P        L    + G  
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 237 DEAIELQNEMMGRG 250
            EA+EL  +M  RG
Sbjct: 324 SEAVELLGKMKKRG 337


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 121/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K I  D+  + ++I GLC+ +    +  L  EMK  G   +      L+D+    G 
Sbjct: 412 LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGR 471

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EALSLL EM  S     VVT+  LIDG CK+  + EA + F  M   G+  NV  Y  
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  L D+M    + PD   Y +L+  + +    K+A ++   MT  G
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D   Y +L+ GLS+ G ++ A  L   +  +G++        ++K  +      EA+
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAV 651

Query: 241 ELQNEMMGRG 250
            L  EMM +G
Sbjct: 652 RLFREMMEKG 661



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 115/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   + T++ G   E     +  +  +M   G  ++ V    L+  Y K G 
Sbjct: 237 MGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGR 296

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E LS +DEM +        TF  L++GLC+ G V+ A++    M   G  P++  Y +
Sbjct: 297 IEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNS 356

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK   +E A  + ++M  RD  P+T  Y  LI    K    +EA  L   +T  G
Sbjct: 357 LIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 416

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  + SL+ GL    + + A  LF EM  +G  PDE     L+     RG ++EA+
Sbjct: 417 ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEAL 476

Query: 241 ELQNEMMGRG 250
            L  EM   G
Sbjct: 477 SLLKEMESSG 486



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 120/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y ++I+GLC   + E++  +L++M     + NTV   TL+    K  +
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQ 401

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L   +    I   V TF  LI GLC +   R A++ F  M   G HP+   Y  
Sbjct: 402 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNM 461

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LC +  +E A +L  EM       +   Y  LIDG+ K++  +EA  + + M   G
Sbjct: 462 LIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQG 521

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ GL +   ++EA  L  +M+  G+ PD+    SLL      G++ +A 
Sbjct: 522 ISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAA 581

Query: 241 ELQNEMMGRG 250
           ++   M   G
Sbjct: 582 DIVQTMTSNG 591



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 115/253 (45%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K    D   Y  +I  LC   + E++  LL EM+ +G + N V   TL+D + K   
Sbjct: 447 MKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKR 506

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + DEM    I   VVT+  LIDGLCK+  V EA     +M   GL P+   Y +
Sbjct: 507 IEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C+   I++A ++   M      PD+  Y  LI G  K    + A  L   +   G
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEA 239
           + L    Y  ++  L R     EA  LF EM+ +G  PD +    + +     G  + EA
Sbjct: 627 MVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEA 686

Query: 240 IELQNEMMGRGLL 252
           ++   EM  +G L
Sbjct: 687 VDFLVEMTDKGFL 699



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + D   + +++ GLC     + +  +L  M + G   +     +L+    K GE
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +L++M+        VT+  LI  LCK   V EA +    +   G+ P+V  + +
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC  N    A  LF+EM  +   PD   Y  LID        +EAL+L   M   G
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y +L+ G  +   ++EA  +F EM  +GI  + +   +L+    +   ++EA 
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAA 546

Query: 241 ELQNEMMGRGL 251
           +L ++M+  GL
Sbjct: 547 QLMDQMLMEGL 557



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 108/240 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I  LC E++ E++  L   +   G+  +     +L+           A+ L +EM 
Sbjct: 389 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK 448

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                    T+ +LID LC  G + EA+     M   G   NV  Y  LIDG CK   IE
Sbjct: 449 TKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIE 508

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +FDEM  + +  +   Y  LIDG  K+   +EA  L ++M   G+  D   Y SL+
Sbjct: 509 EAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLL 568

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               R G +++A  +   M   G  PD +   +L+    + G ++ A  L   +  +G++
Sbjct: 569 TYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMV 628



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 108/236 (45%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ G C E + E+    + EM   G   +     +L++   + G    AL +LD ML   
Sbjct: 287 LVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG 346

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
            +  + T+  LI GLCK G V EA++   +M      PN   Y  LI  LCK+N +E A 
Sbjct: 347 FDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT 406

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L   +  + ++PD   + +LI G     + + A+ L   M   G   D   Y  L+  L
Sbjct: 407 ELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSL 466

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              G L+EA  L  EM   G   + +   +L+    +   ++EA E+ +EM  +G+
Sbjct: 467 CSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 115/247 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D   Y  ++  L   +K +  +++ S M   G+  +      L+ A  +A +   A+
Sbjct: 172 LKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAI 231

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +++EM    +     TF  L+ G  + G +  A+    +M   G   +      L+ G 
Sbjct: 232 LMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGY 291

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  IE   +  DEM      PD   + +L++G  +    K AL + + M + G D D+
Sbjct: 292 CKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDI 351

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL++GL + G ++EA  + ++MI R   P+ +   +L+    +   ++EA EL   
Sbjct: 352 FTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARV 411

Query: 246 MMGRGLL 252
           +  +G+L
Sbjct: 412 LTSKGIL 418



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 3/177 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D   YGT+I GL    + E +  LL  ++  G+         ++ A F+   
Sbjct: 587 MTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKR 646

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG-LVREAIDYFGRMPDFGLHPNVAVYT 119
            SEA+ L  EM++       VT+ V+  GLC  G  + EA+D+   M D G  P+ + + 
Sbjct: 647 TSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFL 706

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            L +GLC  +  +    L + + K+    D+    ++I G+LK   F++AL    R+
Sbjct: 707 MLAEGLCALSMEDTLIKLVNRVMKQANFSDSEV--SMIMGFLKIRKFQDALATLGRI 761



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 97/251 (38%), Gaps = 36/251 (14%)

Query: 37  KENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV 96
           K+     ++VI   ++    K G       +L EM  +  E+   TF +LI+   K  L 
Sbjct: 97  KQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELF 156

Query: 97  REAI-------DYFG-----------------------------RMPDFGLHPNVAVYTA 120
            EA+       + FG                             RM   G+ P+V  +  
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNI 216

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC+ + I  A  + +EM    + PD   +T L+ G+++  +   AL ++ +M   G
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG 276

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                     LV G  + G ++E      EM   G  PD     SL+      G++  A+
Sbjct: 277 CPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHAL 336

Query: 241 ELQNEMMGRGL 251
           E+ + M+  G 
Sbjct: 337 EILDVMLQEGF 347



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 11/163 (6%)

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +D+  + P+F   P+  +Y  ++  L K       R +  EM           +  LI+ 
Sbjct: 92  LDWASKQPNF--VPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIES 149

Query: 160 YLKHESFKEALNLKNRMTE-VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           Y K E F EA+ + + M E  G+ LD   Y  L+  L     L+   ++   M+ RGI P
Sbjct: 150 YAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKP 209

Query: 219 D----EILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
           D     IL  +L + H  R     AI +  EM   GL    K 
Sbjct: 210 DVTTFNILIKALCRAHQIR----PAILMMEEMGSYGLSPDEKT 248


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +++ +L +Y  +I GLC +    D+  L S++ E G+  + V   +L+D     G 
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LL +M+   ++    TF +LID LCK G + EA      M   G  P++  Y A
Sbjct: 246 WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G C +  +  AR LF+ M KR + PD   Y  LIDGY K +   EA+ L   +    
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   + +Y SL+ GL   G +   + L  EM G    PD +    L+    + G + EA+
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425

Query: 241 ELQNEMMGRGL 251
            +   MM +G+
Sbjct: 426 GVLVMMMKKGV 436



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 119/247 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y  +I G C     +++ +L  E+    L        +L+D    +G 
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S    LLDEM  S     VVT+ +LID LCK G + EA+     M   G+ PN+  Y A
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG C +N +  A+++F+ M K  + PD   Y  LI+GY K E   EA+ L   M    
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ +Y SL+ GL   G +   + L  EM   G  PD I    LL    +    D+AI
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAI 565

Query: 241 ELQNEMM 247
            L  +++
Sbjct: 566 SLFRQIV 572



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 125/253 (49%), Gaps = 2/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  D   +  +I  LC E +  +++ +L+ M + G   + V    LM+ Y     
Sbjct: 256 MVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L + M+   +E  V+ + VLIDG CK+ +V EA+  F  + +  L P +A Y +
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC    I   + L DEM      PD   Y  LID   K     EAL +   M + G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM-DEA 239
           V  ++  Y +++ G     ++  A+ +F+ M+  G+ PD IL  ++L   Y +  M DEA
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPD-ILNYNVLINGYCKTEMVDEA 494

Query: 240 IELQNEMMGRGLL 252
           I L  EM  + L+
Sbjct: 495 IVLFKEMRHKNLI 507



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GL    + + +  LL EM+++ +  N V+ + L+D   K G  S+AL L  ++ 
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I +  VT+  LIDG C  G  +E      +M    + P+   +  LID LCK+  I 
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +   M KR   PD   Y AL++GY   E+  EA  L NRM + G++ D+  Y  L+
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + EA VLF E+  + ++P      SL+      G +    +L +EM G  
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA 400



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 117/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ G C      +++ L + M + GL  + +    L+D Y K   
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  E+ +  +  T+ ++  LIDGLC SG +         M      P+V  Y  
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK+  I  A  +   M K+ + P+   Y A++DGY    +   A ++ NRM + G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  Y  L+ G  +   + EA VLF EM  + ++PD     SL+      G +    
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 241 ELQNEMMGRG 250
           EL +EM   G
Sbjct: 531 ELLDEMCDSG 540



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 127/290 (43%), Gaps = 34/290 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     D+  Y  +I  LC E +  ++  +L  M + G+  N V    +MD Y     
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  + + M+ S +E  ++ + VLI+G CK+ +V EAI  F  M    L P++A Y +
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE-- 178
           LIDGLC    I   + L DEM      PD   Y  L+D + K + F +A++L  ++ E  
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGI 575

Query: 179 --------------------------------VGVDLDLNAYTSLVWGLSRCGHLQEARV 206
                                            G   ++  YT L+  L + G   EA +
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           L  +M      PD I    ++    +R   D+A +L+ EM+ RGL++  K
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEK 685



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 119/247 (48%), Gaps = 2/247 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + +L  + TII G CI      +      +   G   +     TL++   K G+   AL 
Sbjct: 122 QPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALH 181

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL EM  S ++  +V +  LIDGLCK G V +A+    ++ + G+  +   Y +LIDG C
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    L  +M + ++ PD   +  LID   K     EA  +   M++ G   D+ 
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV 301

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM-DEAIELQNE 245
            Y +L+ G     ++ EAR LF+ M+ RG+ PD +L  ++L   Y +  M DEA+ L  E
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPD-VLNYNVLIDGYCKTKMVDEAMVLFKE 360

Query: 246 MMGRGLL 252
           +  + L+
Sbjct: 361 LCNKNLV 367



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 35/255 (13%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++++  G++ +    T L++ YF     + A SLL  +L S  +  +VTF  +I+G C
Sbjct: 77  LFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC 136

Query: 92  KSGLVREAIDY-----------------------------------FGRMPDFGLHPNVA 116
            +G++ +A+D+                                      M    + PN+ 
Sbjct: 137 INGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV 196

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +Y+ALIDGLCK   +  A  L  ++ +R ++ D   Y +LIDG      ++E   L  +M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
               VD D   +  L+  L + G + EA+ +   M  RG  PD +   +L++ +  R N+
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENV 316

Query: 237 DEAIELQNEMMGRGL 251
            EA EL N M+ RGL
Sbjct: 317 HEARELFNRMVKRGL 331



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 89/190 (46%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A++  + M+          F  L+  + + G    AI  F ++   G+ P++A +T LI
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +    ++    A +L   + K    P+   +  +I+G+  +    +AL+    +   G  
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   Y +L+ GLS+ G ++ A  L  EM    + P+ ++  +L+    + G + +A+ L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 243 QNEMMGRGLL 252
            +++  RG+L
Sbjct: 218 CSQIGERGIL 227



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/156 (21%), Positives = 67/156 (42%)

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           C+   V +A+  F RM      P  +V+  L+  + +      A +LF ++  + + P  
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             +T LI+ Y        A +L   + + G   +L  + +++ G    G + +A      
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           ++ +G L D+    +L+    + G +  A+ L  EM
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186


>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
          Length = 1184

 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 130/249 (52%), Gaps = 1/249 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  + ++++G C E K  ++K +L +MKE GL  + V+ T L+  Y  AG+ ++A  L+
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKS-GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           ++M     E  V  + VLI  LC++   + EA+  F  M  +G   ++  YTALI G CK
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              I++  ++ D+M K+ ++P    Y  ++  + K E F+E L L  +M   G   DL  
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  ++    + G ++EA  L++EM   G+ P     + ++     +G + EA     EM+
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474

Query: 248 GRGLLSGSK 256
            RG+ S  +
Sbjct: 475 SRGIFSAPQ 483



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 2/255 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D  ++G ++  LC     +++  +  +M+E     N    T+L+  + + G+
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGK 251

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L +M ++ +E  +V F  L+ G   +G + +A D    M   G  PNV  YT 
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311

Query: 121 LIDGLCK-KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI  LC+ +  ++ A  +F EM +     D   YTALI G+ K     +  ++ + M + 
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV      Y  ++    +    +E   L  +M  RG  PD ++   +++   + G + EA
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEA 431

Query: 240 IELQNEMMGRGLLSG 254
           + L NEM   GL  G
Sbjct: 432 VRLWNEMEANGLSPG 446



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 13/240 (5%)

Query: 17  IWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           +WGL  E +  + +L+  E+              LM  +  A    +A+ +LDEM    +
Sbjct: 150 VWGLIEEMRKTNPELIEPEL-----------FVVLMRRFASANMVKKAVEVLDEMPKYGL 198

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
           E     F  L+D LCK+G V+EA   F  M +    PN+  +T+L+ G C++  +  A+ 
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKE 257

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           +  +M +  + PD   +T L+ GY       +A +L N M + G + ++N YT L+  L 
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317

Query: 197 RC-GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           R    + EA  +F EM   G   D +   +L+    + G +D+   + ++M  +G++   
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 107/228 (46%), Gaps = 8/228 (3%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +AD+  Y  +I G C     +    +L +M++ G+  + V    +M A+ K  +  E L 
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L+++M        ++ + V+I   CK G V+EA+  +  M   GL P V  +  +I+G  
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458

Query: 127 KKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFKEALN----LKNRMTEVG 180
            +  +  A N F EM  R +   P      +L++  ++ +  + A +    + N+ +   
Sbjct: 459 SQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTS--S 516

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
            +L+++A+T  +  L   GH++EA     +M+   ++P       L+K
Sbjct: 517 CELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMK 564


>gi|341605721|gb|AEK82963.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
 gi|341605821|gb|AEK83013.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LI GL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LI G  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIXGLGKAGRIDEAERLFEEMSEKG 152


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 121/229 (52%), Gaps = 2/229 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG  +K D   Y  +I G     K E +  L   M E+G++ N V  T ++D YF   +
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  +M++S    +  T+ V+I G  K+  + EA ++ G+M   GL PNV  YT+
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA--LNLKNRMTE 178
            IDGLC+      A  +F EM KR+  P+   Y++LI G  +    ++A   NL  R+T 
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            G + +++ YT+LV GL   G   EA  L   M  +G+ P E +  +LL
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALL 701



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C     + +  +   M ++G   N+V  +TL++     G   EA+ +L+EM+
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              IE TV T+ + +  LC +G   EA++  G+M   G  PN+  +TALI GL +    E
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L+ +M    ++P T  Y ALI+       F+ A  +   M   G       Y  ++
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                 G +Q+A V+F +M+  G  P+ I   +L+  + ++GN++ A+ L   M G GL
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL 478



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 123/279 (44%), Gaps = 35/279 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC E + E++  +L EM + G+       T  + +   AG  SEA+ LL +M 
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMK 334

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC------ 126
                  + TF  LI GL + G    AI  + +M   GL P    Y ALI+ LC      
Sbjct: 335 KRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFE 394

Query: 127 -------------------------KKNC----IERARNLFDEMPKRDMIPDTTAYTALI 157
                                    K  C    I++A  +FD+M K    P+   Y  LI
Sbjct: 395 TAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLI 454

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            GY K  +   A+ L   M   G+  D   YT L+ G SR G L+ A  LF+ M+  GI 
Sbjct: 455 YGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGIS 514

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           P+ +   +++  ++    +D+A+ L  +M+  G L  S+
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 111/237 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC+E +FE +  +   M  +G   +T     ++  +   G+  +A+ + D+ML
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +     V+T+  LI G CK G +  A+     M   GL P+   YT LI G  +   +E
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +LF  M +  + P+   YTA+IDGY       +AL L  +M E G       Y  ++
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            G S+   + EA     +M+ +G+LP+ I   S +      G    A ++ +EM  R
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 108/227 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II   C+    + + ++  +M + G + N +   TL+  Y K G  + A+ LL+ M 
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + ++    T+  LI G  + G +  A   F  M + G+ PN   YTA+IDG      ++
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF +M +   +P +  Y  +I G+ K  S  EA N   +M + G+  ++  YTS +
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            GL R G    A  +FHEM  R   P+     SL+    + G  ++A
Sbjct: 595 DGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 2/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G    +   +++    +M + GL  N +  T+ +D   + G    A  +  EM 
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDY--FGRMPDFGLHPNVAVYTALIDGLCKKNC 130
                  + T+  LI GLC+ G   +A  Y    R+  +G  PNV  YT L+ GLC +  
Sbjct: 615 KRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR 674

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A  L   M K+ + P    Y AL+ G  K+   + ALN+   M  +G  L L+ Y +
Sbjct: 675 CYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKA 734

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           L+  L +   ++EA+ +F  M+ +    DE++   LL    + G  D  ++L + M  R
Sbjct: 735 LICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESR 793



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 113/252 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    ++  +  +I GL  + KFE +  L  +M  +GL   TV    L++     G 
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++   ML      +  T+  +I   C  G +++A+  F +M   G  PNV  Y  
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+  +  A  L + M    + PD   YT LI G+ +    + A +L   M E G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+++ G      + +A  LF +M+  G LP       ++    +  ++ EA 
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572

Query: 241 ELQNEMMGRGLL 252
               +M+ +GLL
Sbjct: 573 NFCGKMVKQGLL 584



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 5/227 (2%)

Query: 30  KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG 89
           K+L S ++ + LT NT+I     +   K G   EA  ++  +          T+  LI G
Sbjct: 192 KMLNSGIRPSLLTFNTMI-----NILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILG 246

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
            C++  +  A   F RM   G  PN   Y+ LI+GLC +  +E A ++ +EM ++ + P 
Sbjct: 247 HCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPT 306

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              YT  +          EA+ L  +M + G   ++  +T+L+ GLSR G  + A  L+H
Sbjct: 307 VYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYH 366

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           +M+  G++P  +   +L+ +    G  + A  +   M+  G L  ++
Sbjct: 367 KMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQ 413



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 2/198 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL--LLSEMKENGLTANTVICTTLMDAYFKA 58
           M+ +N   +L  Y ++I+GLC E + ED+++  LL+ +   G   N    TTL+      
Sbjct: 613 MEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGE 672

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G   EA  L+  M    ++ +   +  L+ G CK+  V  A++ F  M   G   +++ Y
Sbjct: 673 GRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDY 732

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            ALI  LCK+N IE A+ +F  M ++    D   +T L+DG LK       L L + M  
Sbjct: 733 KALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMES 792

Query: 179 VGVDLDLNAYTSLVWGLS 196
               L+   Y  L   LS
Sbjct: 793 RNCTLNFQTYVMLARELS 810



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 3/194 (1%)

Query: 59  GEPSEALSLLDEMLDSRIEV--TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           GE       L E ++S+ +   T+ +F  L+  L K  +V  A D + +M + G+ P++ 
Sbjct: 145 GEVKRVTQFLSE-INSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLL 203

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +  +I+ LCKK  ++ A+ +   + + D  P+   YT+LI G+ ++ +   A  + +RM
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            + G D +   Y++L+ GL   G L+EA  +  EM+ +GI P        L    + G  
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 237 DEAIELQNEMMGRG 250
            EA+EL  +M  RG
Sbjct: 324 SEAVELLGKMKKRG 337


>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
          Length = 581

 Score =  126 bits (317), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D      ++  L        ++ +  EM   GL A T +   ++    KAG+
Sbjct: 134 MRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAATTHVYNAMLHVCLKAGD 193

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A +++  M  + + +   ++  +I   C+ G+  EA+    RM   G+ P+   + +
Sbjct: 194 AAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNS 253

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I GLCK+  ++ A  LF EM      PD   YT LIDGY +  + +EA+ L+ RM   G
Sbjct: 254 SIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAG 313

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +++  L   G+++E   L HEM GR +  D + C +L+  + +RG+M  A 
Sbjct: 314 MLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSAC 373

Query: 241 ELQNEMMGRGL 251
           +++ +MM  GL
Sbjct: 374 KVKKKMMESGL 384



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 115/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   Y T+I   C +    ++      M + G+  +TV   + +    K G 
Sbjct: 204 MDAAGVTLDRFSYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGR 263

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM+ ++     VT+  LIDG C++G V EA+   GRM   G+ P VA Y A
Sbjct: 264 VKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNA 323

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LC+   ++    L  EM  R +  D      LI+ Y K      A  +K +M E G
Sbjct: 324 ILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESG 383

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   Y +L+ G  +   L  A+  F +M+  G  P+  +   L+    ++ N D  +
Sbjct: 384 LQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVL 443

Query: 241 ELQNEMMGRGL 251
            + +E+M RGL
Sbjct: 444 AIPDELMKRGL 454



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 124/281 (44%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D   + + I GLC E + +++  L +EM     T + V  TTL+D Y +AG 
Sbjct: 239 MDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGN 298

Query: 61  PSEALSL-----------------------------------LDEMLDSRIEVTVVTFCV 85
             EA+ L                                   L EM   +++   VT   
Sbjct: 299 VEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNT 358

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+  CK G +  A     +M + GL  N   Y ALI G CK   ++ A+  F +M    
Sbjct: 359 LINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAG 418

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+ + ++ L+DG+ K  +    L + + + + G+  D   Y SL+  L R G + +A+
Sbjct: 419 FSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQ 478

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +F +M  +G++ D ++  +L   +  +GN   A+   + M
Sbjct: 479 RVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGM 519



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 102/234 (43%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  L   ++  D+  +   M+  GL  +   CT L+ A  +A   + A  + DEM  + 
Sbjct: 114 LVLVLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAG 173

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           +  T   +  ++    K+G   +A     RM   G+  +   Y  +I   C+K     A 
Sbjct: 174 LAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKGMGYEAM 233

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
              D M K  + PDT  + + I G  K    KEA  L   M       D   YT+L+ G 
Sbjct: 234 CARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGY 293

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            R G+++EA  L   M   G+LP      ++L+K  E GNM E   L +EM GR
Sbjct: 294 CRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGR 347



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 37/210 (17%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V ++ VL+  L +S    +A+  F  M   GL P+    TAL+  L +      AR +FD
Sbjct: 110 VPSWLVLV--LAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRVFD 167

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV------- 192
           EM +  +   T  Y A++   LK     +A  +  RM   GV LD  +Y +++       
Sbjct: 168 EMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCRKG 227

Query: 193 -----------------------W-----GLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
                                  W     GL + G ++EA  LF EM+     PD +   
Sbjct: 228 MGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYT 287

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           +L+  +   GN++EA++L+  M   G+L G
Sbjct: 288 TLIDGYCRAGNVEEAVKLRGRMEAAGMLPG 317



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 3/160 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C   + + +K    +M + G + N  + + L+D + K       L++ DE++
Sbjct: 391 YKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELM 450

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +      +  LI  LC+ GLV +A   F +M   GL  +  VY  L      K    
Sbjct: 451 KRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPT 510

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
            A N  D M K  +      Y  L   Y      KE LN+
Sbjct: 511 AALNTLDGMTKNQLYITPQIYNCLCTSYADE---KETLNM 547


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 102/200 (51%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y   I GLC   K +D++   S +   G   +     TL+  Y  AG   EA  L DEM
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L   +   +VT+  LI+GLCKS  V  A   F ++   GL PNV  Y  LIDG CK   +
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 835

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A  L D+M +  + P    Y+ALI+G  KH   + ++ L N+M + GVD  L  Y +L
Sbjct: 836 DAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTL 895

Query: 192 VWGLSRCGHLQEARVLFHEM 211
           V G  R G +Q+   L+  M
Sbjct: 896 VQGYIRSGEMQKIHKLYDMM 915



 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 118/234 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I G C   K +D+  LL EM   GL  N  IC +L++ Y K GE  EA  ++  M+
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  ++    ++  L+DG C+ G   EA +   +M   G+ P V  Y  L+ GLC+    +
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  ++  M KR + PD   Y+ L+DG  K E+F+ A  L   +   G       + +++
Sbjct: 455 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 514

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL + G + EA  +F +M   G  PD I   +L+  + +  N+ +A +++  M
Sbjct: 515 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 7/255 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ ++  Y ++I G       E +K +L  M E G++ N V  T L+  Y K  +
Sbjct: 252 MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCK 311

Query: 61  PSEALSLLDEMLDSRIEVTVV----TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
             EA  +L  M +   E  +V     + VLIDG C++G + +A+     M   GL  N+ 
Sbjct: 312 MDEAEKVLRGMQE---EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 368

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +  +LI+G CK+  I  A  +   M   ++ PD+ +Y  L+DGY +     EA NL ++M
Sbjct: 369 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 428

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            + G++  +  Y +L+ GL R G   +A  ++H M+ RG+ PDE+   +LL   ++  N 
Sbjct: 429 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENF 488

Query: 237 DEAIELQNEMMGRGL 251
           + A  L  +++ RG 
Sbjct: 489 EGASTLWKDILARGF 503



 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 141/315 (44%), Gaps = 67/315 (21%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  ++  YG +I G C E   + +     EM ENGL+AN +IC+T++   ++ G   E
Sbjct: 606 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665

Query: 64  ALSLLDEMLD------------SRIEVTVV--------------------TFCVLIDGLC 91
           A  L+ +M+D            S I    +                     + + I GLC
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 725

Query: 92  KSGLVREAIDYF------GRMPD-----------------------------FGLHPNVA 116
           K+G V +A  +F      G +PD                              GL PN+ 
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y ALI+GLCK   ++RA+ LF ++ ++ + P+   Y  LIDGY K  +   A  LK++M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G+   +  Y++L+ GL + G ++ +  L ++MI  G+    I   +L++ +   G M
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEM 905

Query: 237 DEAIELQNEMMGRGL 251
            +  +L + M  R L
Sbjct: 906 QKIHKLYDMMHIRCL 920



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+  +  Y T++ GLC    F+D+  +   M + G+  + V  +TL+D  FK   
Sbjct: 428 MLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMEN 487

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L  ++L      + +TF  +I GLCK G + EA + F +M D G  P+   Y  
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK + + +A  +   M +  + P    Y +LI G  K     E  +L   M   G
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 607

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ G  + G L +A   + EM   G+  + I+C +++   Y  G +DEA 
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 667

Query: 241 ELQNEMMGRGLL 252
            L  +M+  G  
Sbjct: 668 LLMQKMVDHGFF 679



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M  K +  ++  Y  +I G C + K ++++ +L  M+E   L  +      L+D Y + G
Sbjct: 287 MSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTG 346

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  +A+ LLDEML   ++  +     LI+G CK G + EA     RM D+ L P+   Y 
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 406

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+DG C++     A NL D+M +  + P    Y  L+ G  +  +F +AL + + M + 
Sbjct: 407 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 466

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV  D   Y++L+ GL +  + + A  L+ +++ RG     I   +++    + G M EA
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 240 IELQNEMMGRG 250
            E+ ++M   G
Sbjct: 527 EEIFDKMKDLG 537



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +L +  ++I G C   +  +++ +++ M +  L  ++    TL+D Y + G  SEA 
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 422

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID-- 123
           +L D+ML   IE TV+T+  L+ GLC+ G   +A+  +  M   G+ P+   Y+ L+D  
Sbjct: 423 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 482

Query: 124 ---------------------------------GLCKKNCIERARNLFDEMPKRDMIPDT 150
                                            GLCK   +  A  +FD+M      PD 
Sbjct: 483 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 542

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LIDGY K  +  +A  +K  M    +   +  Y SL+ GL +   L E   L  E
Sbjct: 543 ITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTE 602

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  RG+ P+ +   +L+    + G +D+A     EM   GL
Sbjct: 603 MGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 106/220 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y T++ GL     FE +  L  ++   G T + +   T++    K G+
Sbjct: 463 MMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGK 522

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + D+M D       +T+  LIDG CK+  V +A    G M    + P++ +Y +
Sbjct: 523 MVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNS 582

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL K   +    +L  EM  R + P+   Y ALIDG+ K     +A +    MTE G
Sbjct: 583 LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 642

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  ++   +++V GL R G + EA +L  +M+  G  PD 
Sbjct: 643 LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 32/272 (11%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GLC   K  +++ +  +MK+ G + + +   TL+D Y KA    +A  +   M 
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  ++  +  LI GL KS  + E  D    M   GL PN+  Y ALIDG CK+  ++
Sbjct: 570 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV----------D 182
           +A + + EM +  +  +    + ++ G  +     EA  L  +M + G           D
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 689

Query: 183 LDLNA----------------------YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +   A                      Y   + GL + G + +AR  F  +  +G +PD 
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               +L+  +   GN+DEA  L++EM+ RGL+
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 23/249 (9%)

Query: 14  GTIIW----GLCIESKFEDS--KLLLSEMKENGLTANTVI----------------CTTL 51
           G +IW    G+  E  F  +   ++L    E GLT N +                 C +L
Sbjct: 138 GNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSL 197

Query: 52  MDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGL 111
           ++   K GE   A  +  +M+   I   V    ++++  CK G V EA  +  +M + G+
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
            PN+  Y +LI+G      +E A+ +   M ++ +  +   YT LI GY K     EA  
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 317

Query: 172 -LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L+    E  +  D  AY  L+ G  R G + +A  L  EM+  G+  +  +C SL+  +
Sbjct: 318 VLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 377

Query: 231 YERGNMDEA 239
            +RG + EA
Sbjct: 378 CKRGEIHEA 386



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 71/144 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  Y  +I GLC     + ++ L  ++ + GL  N V   TL+D Y K G 
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L D+M++  I  +VVT+  LI+GLCK G +  ++    +M   G+   +  Y  
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894

Query: 121 LIDGLCKKNCIERARNLFDEMPKR 144
           L+ G  +   +++   L+D M  R
Sbjct: 895 LVQGYIRSGEMQKIHKLYDMMHIR 918



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 2/148 (1%)

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
           G   +F   P   V+  ++    +K   + A  +FD M K   IP   +  +L++  +K+
Sbjct: 147 GVYREFAFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKN 204

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
                A  +  +M  VG+  D+   + +V    + G + EA     +M   G+ P+ +  
Sbjct: 205 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 264

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
            SL+  +   G+++ A  +   M  +G+
Sbjct: 265 HSLINGYVSLGDVEAAKGVLKFMSEKGV 292


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 125/247 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+AD+  Y   I  LC   +   + LLL +M++  ++ N V   TL++ + K G+   
Sbjct: 297 KGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGV 356

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  + +EM    +    VT+  LI G C  G   EA+     M   GL  N   Y  L++
Sbjct: 357 AAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLN 416

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK    E A+ L + M   DM+    AYT LIDG  K+    EA+ L   M + GV+ 
Sbjct: 417 GLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNP 476

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y+SL+ G  R G+++ A+ +   M   G++ ++I+  +L+    + GN+ EA+++ 
Sbjct: 477 DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVY 536

Query: 244 NEMMGRG 250
             M   G
Sbjct: 537 AVMNCNG 543



 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  +  +I GLC+E   + +  LL +M+ENG     V   TL++ Y K G 
Sbjct: 224 MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L+D M+   IE  V T+ V ID LC +    +A     +M    + PN   Y  
Sbjct: 284 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G  K+  I  A  +F+EM K D+ P+   Y ALI G+     F+EAL L + M   G
Sbjct: 344 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   Y +L+ GL +    + A+ L   M    ++   I    L+    + G +DEA+
Sbjct: 404 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 463

Query: 241 ELQNEMMGRGL 251
           +L   M   G+
Sbjct: 464 QLVGNMYKDGV 474



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 125/289 (43%), Gaps = 36/289 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLL-SEMKENGLTANTVICTTLMDAYFKAG 59
           M   N+  D   Y +++ GLC + K   +  L  + M    L  N V+ T L+D   KAG
Sbjct: 679 MVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAG 738

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
            P  A    +EM+        V F  +ID   + G + +A D+F  M  +G+ PN+A Y 
Sbjct: 739 HPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN 798

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG-------------------- 159
            L+ G  KK  + R  +L+  M +  + PD   + +LI G                    
Sbjct: 799 ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 858

Query: 160 ---------------YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
                          Y +    ++A +L N M  +GV  D + Y  +  GL++    +E+
Sbjct: 859 GTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRES 918

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
            V+ HEM+  G++P     I+L+      G++  A +L++EM   G  S
Sbjct: 919 TVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGS 967



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 120/242 (49%), Gaps = 1/242 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG+++ GLC      ++K  L+ +       ++V+  TL+    K+G   EA++L D+M+
Sbjct: 621 YGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 680

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDGLCKKNCI 131
            + +     T+  L+ GLC+ G    A+  FG     G L PN  +YT L+DGL K    
Sbjct: 681 QNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHP 740

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A   F+EM K+   PDT A+ A+ID   +     +A +  + M   GV  +L  Y  L
Sbjct: 741 KAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNIL 800

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G S+   L     L+  M+  GI PD++   SL+    + G  D  ++L  +M+  G 
Sbjct: 801 LHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGT 860

Query: 252 LS 253
           L+
Sbjct: 861 LA 862



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 116/238 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C    FE++  LL  M+  GL  N V   TL++   K  +   A  LL+ M 
Sbjct: 376 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 435

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + + V  + + VLIDGLCK+G++ EA+   G M   G++P+V  Y++LI+G C+   I+
Sbjct: 436 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 495

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +   M +  ++ +   Y+ LI  + +H +  EA+ +   M   G   D      LV
Sbjct: 496 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLV 555

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             L R G L EA      M   G++P+ I    ++  +   G+   A    ++M+  G
Sbjct: 556 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCG 613



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  +   Y T+I G   E K   +  + +EM +  L+ N V    L+  +   G+
Sbjct: 329 MRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGD 388

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LLD M  + + +  VT+  L++GLCK      A     RM    +      YT 
Sbjct: 389 FEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTV 448

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   ++ A  L   M K  + PD   Y++LI+G+ +  + K A  +  RM   G
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   Y++L++   + G++ EA  ++  M   G   D   C  L+      G + EA 
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568

Query: 241 ELQNEMMGRGLLSGS 255
           +    M   GL+  S
Sbjct: 569 KFLCHMSRIGLVPNS 583



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 113/252 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y ++I G C     + +K ++  M  +GL  N +I +TL+  + + G 
Sbjct: 469 MYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN 528

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA+ +   M  +       T  VL+  LC+ G + EA  +   M   GL PN   Y  
Sbjct: 529 VTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDC 588

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G         A + FD+M K    P    Y +L+ G  K  +  EA    NR+  + 
Sbjct: 589 IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIP 648

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +D   Y +L+    + G+L EA  LF +M+   +LPD     SLL     +G    A+
Sbjct: 649 GAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV 708

Query: 241 ELQNEMMGRGLL 252
            L    MGRG L
Sbjct: 709 CLFGTAMGRGTL 720



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 35/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ +   YGT++ GLC   KFE +K LL  M+ N +    +  T L+D   K G 
Sbjct: 399 MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 458

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L+  M    +   V+T+  LI+G C+ G ++ A +   RM   GL  N  +Y+ 
Sbjct: 459 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYST 518

Query: 121 LIDGLCKK-------------NC----------------------IERARNLFDEMPKRD 145
           LI   C+              NC                      +  A      M +  
Sbjct: 519 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG 578

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P++  Y  +I+GY        A +  + M + G       Y SL+ GL + G+L EA+
Sbjct: 579 LVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAK 638

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
              + +       D ++  +LL +  + GN+ EA+ L ++M+   +L  S
Sbjct: 639 KFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 688



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 1/240 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y T+I+  C      ++  + + M  NG  A+   C  L+ +  + G+  EA   L  M
Sbjct: 515 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 574

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               +    +T+  +I+G    G    A  +F  M   G HP+   Y +L+ GLCK   +
Sbjct: 575 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 634

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A+   + +       D+  Y  L+    K  +  EA+ L ++M +  V  D   Y+SL
Sbjct: 635 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 694

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGIL-PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + GL R G    A  LF   +GRG L P+ ++   L+    + G+   A     EMM +G
Sbjct: 695 LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 754



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 110/246 (44%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+   +  +L  Y  ++ G   +        L S M   G+  + +   +L+    K+G 
Sbjct: 785  MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 844

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            P   + LL +M+         TF +LI+   +SG +R+A D    M   G+ P+   Y  
Sbjct: 845  PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 904

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            + +GL KK+    +  +  EM +  +IP    Y  LI+G  +    + A  LK+ M  +G
Sbjct: 905  IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 964

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                  A +++V GL  CG  ++A ++   M+   +LP      +L+ +      + EA+
Sbjct: 965  FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEAL 1024

Query: 241  ELQNEM 246
            +L+  M
Sbjct: 1025 KLKGVM 1030



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 95/212 (44%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   +   C  ++ +  K        SL  EM D  I   V TF +LI+GLC  G +++A
Sbjct: 193 GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 252

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
            +   +M + G  P +  Y  L++  CKK   + A  L D M  + +  D   Y   ID 
Sbjct: 253 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDN 312

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              +    +A  L  +M +  +  +   Y +L+ G  + G +  A  +F+EM    + P+
Sbjct: 313 LCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPN 372

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   +L+  H   G+ +EA+ L + M   GL
Sbjct: 373 CVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 10/221 (4%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM + G+  N      L++     G   +A +LL +M ++    T+VT+  L++  C
Sbjct: 220 LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 279

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G  + AI+    M   G+  +V  Y   ID LC  +   +A  L  +M K  + P+  
Sbjct: 280 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 339

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  LI+G++K      A  + N M++  +  +   Y +L+ G    G  +EA  L   M
Sbjct: 340 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 399

Query: 212 IGRGILPDEILCISLLK---KHYERGNMDEAIELQNEMMGR 249
              G+  +E+   +LL    KH       E  EL   ++ R
Sbjct: 400 EAAGLRLNEVTYGTLLNGLCKH-------EKFELAKRLLER 433



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y T+I G+C     + +  L  EM+  G  ++ V  + ++      G+  +A+ +LD ML
Sbjct: 937  YITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHML 996

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              R+  T+ TF  L+   C+   + EA+   G M   GL  +V  Y  LI G+C      
Sbjct: 997  RMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSA 1056

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDG 159
             A  L++EM  RD+ P+ T Y  L+D 
Sbjct: 1057 AAFELYEEMRHRDLCPNITTYAVLVDA 1083



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%)

Query: 63   EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            E+  +L EML++ +      +  LI+G+C+ G ++ A      M   G   +    +A++
Sbjct: 917  ESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMV 976

Query: 123  DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
             GL      E A  + D M +  ++P    +T L+  + +     EAL LK  M   G+ 
Sbjct: 977  RGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLK 1036

Query: 183  LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            LD+ AY  L+ G+   G    A  L+ EM  R + P+      L+       N+ +  +L
Sbjct: 1037 LDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 1096

Query: 243  QNEMMGRGLLS 253
              ++  RGL+S
Sbjct: 1097 LTDLQERGLIS 1107



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 35/200 (17%)

Query: 82  TFCVLIDGLCKSGLVREAID-----------------------------------YFGRM 106
            F +LI    K G++  A++                                    F  M
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            D G+ PNV  +  LI+GLC +  +++A NL  +M +   +P    Y  L++ Y K   +
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           K A+ L + M   G++ D+  Y   +  L       +A +L  +M    I P+E+   +L
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344

Query: 227 LKKHYERGNMDEAIELQNEM 246
           +    + G +  A ++ NEM
Sbjct: 345 INGFVKEGKIGVAAQVFNEM 364



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%)

Query: 15   TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
             ++ GL    K ED+ L+L  M    L       TTLM  + +  + +EAL L   M   
Sbjct: 974  AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELC 1033

Query: 75   RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
             +++ VV + VLI G+C +G    A + +  M    L PN+  Y  L+D +   N + + 
Sbjct: 1034 GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQG 1093

Query: 135  RNLFDEMPKRDMI 147
              L  ++ +R +I
Sbjct: 1094 EKLLTDLQERGLI 1106


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  126 bits (317), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 118/234 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I G C   K +D+  LL EM   GL  N  IC +L++ Y K GE  EA  ++  M+
Sbjct: 301 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 360

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  ++    ++  L+DG C+ G   EA +   +M   G+ P V  Y  L+ GLC+    +
Sbjct: 361 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 420

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  ++  M KR + PD   Y+ L+DG  K E+F+ A  L   +   G       + +++
Sbjct: 421 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 480

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL + G + EA  +F +M   G  PD I   +L+  + +  N+ +A +++  M
Sbjct: 481 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 131/255 (51%), Gaps = 7/255 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ ++  Y ++I G       E +K +L  M E G++ N V  T L+  Y K  +
Sbjct: 218 MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCK 277

Query: 61  PSEALSLLDEMLDSRIEVTVV----TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
             EA  +L  M +   E  +V     + VLIDG C++G + +A+     M   GL  N+ 
Sbjct: 278 MDEAEKVLRGMQE---EAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLF 334

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +  +LI+G CK+  I  A  +   M   ++ PD+ +Y  L+DGY +     EA NL ++M
Sbjct: 335 ICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKM 394

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            + G++  +  Y +L+ GL R G   +A  ++H M+ RG+ PDE+   +LL   ++  N 
Sbjct: 395 LQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENF 454

Query: 237 DEAIELQNEMMGRGL 251
           + A  L  +++ RG 
Sbjct: 455 EGASTLWKDILARGF 469



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 3/248 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  ++  YG +I G C E   + +     EM ENGL+AN +IC+T++   ++ G   E
Sbjct: 572 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 631

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L+ +M+D         F   +    +   +++  D         L PN  VY   I 
Sbjct: 632 ANLLMQKMVDHGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIA 688

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   ++ AR  F  +  +  +PD   Y  LI GY    +  EA  L++ M   G+  
Sbjct: 689 GLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVP 748

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y +L+ GL +  ++  A+ LFH++  +G+ P+ +   +L+  + + GNMD A +L+
Sbjct: 749 NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLK 808

Query: 244 NEMMGRGL 251
           ++M+  G+
Sbjct: 809 DKMIEEGI 816



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+  +  Y T++ GLC    F+D+  +   M + G+  + V  +TL+D  FK   
Sbjct: 394 MLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMEN 453

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L  ++L      + +TF  +I GLCK G + EA + F +M D G  P+   Y  
Sbjct: 454 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 513

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK + + +A  +   M +  + P    Y +LI G  K     E  +L   M   G
Sbjct: 514 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 573

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ G  + G L +A   + EM   G+  + I+C +++   Y  G +DEA 
Sbjct: 574 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 633

Query: 241 ELQNEMMGRGLL 252
            L  +M+  G  
Sbjct: 634 LLMQKMVDHGFF 645



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M  K +  ++  Y  +I G C + K ++++ +L  M+E   L  +      L+D Y + G
Sbjct: 253 MSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTG 312

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  +A+ LLDEML   ++  +     LI+G CK G + EA     RM D+ L P+   Y 
Sbjct: 313 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 372

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+DG C++     A NL D+M +  + P    Y  L+ G  +  +F +AL + + M + 
Sbjct: 373 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKR 432

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV  D   Y++L+ GL +  + + A  L+ +++ RG     I   +++    + G M EA
Sbjct: 433 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 492

Query: 240 IELQNEMMGRG 250
            E+ ++M   G
Sbjct: 493 EEIFDKMKDLG 503



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +L +  ++I G C   +  +++ +++ M +  L  ++    TL+D Y + G  SEA 
Sbjct: 329 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 388

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID-- 123
           +L D+ML   IE TV+T+  L+ GLC+ G   +A+  +  M   G+ P+   Y+ L+D  
Sbjct: 389 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 448

Query: 124 ---------------------------------GLCKKNCIERARNLFDEMPKRDMIPDT 150
                                            GLCK   +  A  +FD+M      PD 
Sbjct: 449 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 508

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LIDGY K  +  +A  +K  M    +   +  Y SL+ GL +   L E   L  E
Sbjct: 509 ITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTE 568

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  RG+ P+ +   +L+    + G +D+A     EM   GL
Sbjct: 569 MGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 609



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 106/220 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y T++ GL     FE +  L  ++   G T + +   T++    K G+
Sbjct: 429 MMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGK 488

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + D+M D       +T+  LIDG CK+  V +A    G M    + P++ +Y +
Sbjct: 489 MVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNS 548

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL K   +    +L  EM  R + P+   Y ALIDG+ K     +A +    MTE G
Sbjct: 549 LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 608

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  ++   +++V GL R G + EA +L  +M+  G  PD 
Sbjct: 609 LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 648



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 32/272 (11%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GLC   K  +++ +  +MK+ G + + +   TL+D Y KA    +A  +   M 
Sbjct: 476 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 535

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  ++  +  LI GL KS  + E  D    M   GL PN+  Y ALIDG CK+  ++
Sbjct: 536 REPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 595

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV----------D 182
           +A + + EM +  +  +    + ++ G  +     EA  L  +M + G           D
Sbjct: 596 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 655

Query: 183 LDLNA----------------------YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +   A                      Y   + GL + G + +AR  F  +  +G +PD 
Sbjct: 656 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 715

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               +L+  +   GN+DEA  L++EM+ RGL+
Sbjct: 716 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 747



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 23/249 (9%)

Query: 14  GTIIW----GLCIESKFEDS--KLLLSEMKENGLTANTVI----------------CTTL 51
           G +IW    G+  E  F  +   ++L    E GLT N +                 C +L
Sbjct: 104 GNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSL 163

Query: 52  MDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGL 111
           ++   K GE   A  +  +M+   I   V    ++++  CK G V EA  +  +M + G+
Sbjct: 164 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 223

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
            PN+  Y +LI+G      +E A+ +   M ++ +  +   YT LI GY K     EA  
Sbjct: 224 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 283

Query: 172 -LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L+    E  +  D  AY  L+ G  R G + +A  L  EM+  G+  +  +C SL+  +
Sbjct: 284 VLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 343

Query: 231 YERGNMDEA 239
            +RG + EA
Sbjct: 344 CKRGEIHEA 352



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 68/137 (49%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y   I GLC   K +D++   S +   G   +     TL+  Y  AG   EA  L DEM
Sbjct: 682 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 741

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L   +   +VT+  LI+GLCKS  V  A   F ++   GL PNV  Y  LIDG CK   +
Sbjct: 742 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 801

Query: 132 ERARNLFDEMPKRDMIP 148
           + A  L D+M +  + P
Sbjct: 802 DAAFKLKDKMIEEGISP 818



 Score = 43.9 bits (102), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 46/103 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G       +++  L  EM   GL  N V    L++   K+     A  L  ++ 
Sbjct: 718 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLH 777

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
              +   VVT+  LIDG CK G +  A     +M + G+ P++
Sbjct: 778 QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820



 Score = 42.4 bits (98), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 39/80 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  Y  +I GLC     + ++ L  ++ + GL  N V   TL+D Y K G 
Sbjct: 741 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 800

Query: 61  PSEALSLLDEMLDSRIEVTV 80
              A  L D+M++  I  ++
Sbjct: 801 MDAAFKLKDKMIEEGISPSI 820



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 2/148 (1%)

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
           G   +F   P   V+  ++    +K   + A  +FD M K   IP   +  +L++  +K+
Sbjct: 113 GVYREFAFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKN 170

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
                A  +  +M  VG+  D+   + +V    + G + EA     +M   G+ P+ +  
Sbjct: 171 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 230

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
            SL+  +   G+++ A  +   M  +G+
Sbjct: 231 HSLINGYVSLGDVEAAKGVLKFMSEKGV 258


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 125/243 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G  +    E    +L  M E G++ N V  T+L+  Y K G   EA  + + + 
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + ++      + VL+DG C++G +R+A+     M + G+  N  +  +LI+G CK   + 
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F  M    + PD   Y  L+DGY +     EAL L ++M +  V   +  Y  L+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G SR G   +   L+  M+ RG+  DEI C +LL+  ++ G+ +EA++L   ++ RGLL
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503

Query: 253 SGS 255
           + +
Sbjct: 504 TDT 506



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 117/221 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  Y ++I G C +   E+++ +   +KE  L A+  +   LMD Y + G+
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + D M++  +         LI+G CKSG + EA   F RM D+ L P+   Y  
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C+   ++ A  L D+M +++++P    Y  L+ GY +  +F + L+L   M + G
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           V+ D  + ++L+  L + G   EA  L+  ++ RG+L D I
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTI 507



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 8/261 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ + +   +  YG +I G C     + +     EM E G+T N  IC+ + ++ F+  +
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDK 661

Query: 61  PSEALSLLDEMLDSRIEV----TVVTFCVLIDGLC-KSGLVREAIDYFGRMPDFGLHPNV 115
             EA  LL +++D  + +    ++  F       C K+  + E+++     P   L PN 
Sbjct: 662 IDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVE--NSTPKKLLVPNN 719

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKN 174
            VY   I GLCK   +E AR LF ++   D  IPD   YT LI G        +A  L++
Sbjct: 720 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRD 779

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M   G+  ++  Y +L+ GL + G++  A+ L H++  +GI P+ I   +L+    + G
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839

Query: 235 NMDEAIELQNEMMGRGLLSGS 255
           N+ EA+ L+ +M+ +GL+ GS
Sbjct: 840 NVAEAMRLKEKMIEKGLVRGS 860



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 113/252 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +   +  Y  ++ G      F D   L   M + G+ A+ + C+TL++A FK G+
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGD 486

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA+ L + +L   +    +T  V+I GLCK   V EA +    +  F   P V  Y A
Sbjct: 487 FNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQA 546

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L  G  K   ++ A  + + M ++ + P    Y  LI G  K+    +  +L   +   G
Sbjct: 547 LSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARG 606

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +L+ G    G + +A     EMI +GI  +  +C  +    +    +DEA 
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEAC 666

Query: 241 ELQNEMMGRGLL 252
            L  +++   LL
Sbjct: 667 LLLQKIVDFDLL 678



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 58/291 (19%)

Query: 14  GTIIWGLCI----ESKFEDS--KLLLSEMKENGLTANTVICTTLMDAY------------ 55
           G ++WG  +    E  F  +   ++L    E GL  N +     M  Y            
Sbjct: 137 GFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSL 196

Query: 56  ----FKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR------ 105
                + GE   AL + D+M+   +   V T  ++++  C+SG V +A+ +         
Sbjct: 197 LSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLG 256

Query: 106 ------------------------------MPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
                                         M + G+  NV  YT+LI G CKK  +E A 
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
           ++F+ + ++ ++ D   Y  L+DGY +    ++A+ + + M E+GV  +     SL+ G 
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + G L EA  +F  M    + PD     +L+  +   G +DEA++L ++M
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICT----------- 49
           +K K + AD  +YG ++ G C   +  D+  +   M E G+  NT IC            
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381

Query: 50  ------------------------TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                                   TL+D Y +AG   EAL L D+M    +  TV+T+ +
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+ G  + G   + +  +  M   G++ +    + L++ L K      A  L++ +  R 
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++ DT     +I G  K E   EA  + + +        +  Y +L  G  + G+L+EA 
Sbjct: 502 LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF 561

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   M  +GI P   +  +L+   ++  ++++  +L  E+  RGL
Sbjct: 562 AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGL 607


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 126/250 (50%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K I+AD+  Y   I  LC   +   + LLL +M++  ++ N V   TL++ + K G+
Sbjct: 1045 MICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGK 1104

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               A  + +EM    +    VT+  LI G C  G   EA+     M   GL  N   Y  
Sbjct: 1105 IGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT 1164

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L++GLCK    E A+ L + M   DM+    AYT LIDG  K+    EA+ L   M + G
Sbjct: 1165 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 1224

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            V+ D+  Y+SL+ G  R G+++ A+ +   M   G++ ++I+  +L+    + GN+ EA+
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 1284

Query: 241  ELQNEMMGRG 250
            ++   M   G
Sbjct: 1285 KVYAVMNCNG 1294



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 122/251 (48%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K I  ++  +  +I GLC+E   + +  LL +M+ENG     V   TL++ Y K G 
Sbjct: 975  MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGR 1034

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               A+ L+D M+   IE  V T+ V ID LC +    +A     +M    + PN   Y  
Sbjct: 1035 YKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNT 1094

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LI+G  K+  I  A  +F+EM K D+ P+   Y ALI G+     F+EAL L + M   G
Sbjct: 1095 LINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG 1154

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + L+   Y +L+ GL +    + A+ L   M    ++   I    L+    + G +DEA+
Sbjct: 1155 LRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAV 1214

Query: 241  ELQNEMMGRGL 251
            +L   M   G+
Sbjct: 1215 QLVGNMYKDGV 1225



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 124/287 (43%), Gaps = 36/287 (12%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLL-SEMKENGLTANTVICTTLMDAYFKAG 59
            M   N+  D   Y +++ GLC + K   +  L  + M    L  N V+ T L+D   KAG
Sbjct: 1430 MVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAG 1489

Query: 60   EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             P  A    +EM+        V F  +ID   + G + +A D+F  M  +G+ PN+A Y 
Sbjct: 1490 HPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYN 1549

Query: 120  ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG-------------------- 159
             L+ G  KK  + R  +L+  M +  + PD   + +LI G                    
Sbjct: 1550 ILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIME 1609

Query: 160  ---------------YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
                           Y +    ++A +L N M  +GV  D + Y  +  GL++    +E+
Sbjct: 1610 GTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRES 1669

Query: 205  RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             V+ HEM+  G++P     I+L+      G++  A +L++EM   G 
Sbjct: 1670 TVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 120/242 (49%), Gaps = 1/242 (0%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            YG+++ GLC      ++K  L+ +       ++V+  TL+    K+G   EA++L D+M+
Sbjct: 1372 YGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 1431

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDGLCKKNCI 131
             + +     T+  L+ GLC+ G    A+  FG     G L PN  +YT L+DGL K    
Sbjct: 1432 QNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHP 1491

Query: 132  ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            + A   F+EM K+   PDT A+ A+ID   +     +A +  + M   GV  +L  Y  L
Sbjct: 1492 KAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNIL 1551

Query: 192  VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + G S+   L     L+  M+  GI PD++   SL+    + G  D  ++L  +M+  G 
Sbjct: 1552 LHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGT 1611

Query: 252  LS 253
            L+
Sbjct: 1612 LA 1613



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 116/238 (48%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y  +I G C    FE++  LL  M+  GL  N V   TL++   K  +   A  LL+ M 
Sbjct: 1127 YNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR 1186

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             + + V  + + VLIDGLCK+G++ EA+   G M   G++P+V  Y++LI+G C+   I+
Sbjct: 1187 VNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIK 1246

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             A+ +   M +  ++ +   Y+ LI  + +H +  EA+ +   M   G   D      LV
Sbjct: 1247 SAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLV 1306

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              L R G L EA      M   G++P+ I    ++  +   G+   A    ++M+  G
Sbjct: 1307 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCG 1364



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 113/252 (44%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M    +  D+  Y ++I G C     + +K ++  M  +GL  N +I +TL+  + + G 
Sbjct: 1220 MYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN 1279

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +EA+ +   M  +       T  VL+  LC+ G + EA  +   M   GL PN   Y  
Sbjct: 1280 VTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDC 1339

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +I+G         A + FD+M K    P    Y +L+ G  K  +  EA    NR+  + 
Sbjct: 1340 IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIP 1399

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +D   Y +L+    + G+L EA  LF +M+   +LPD     SLL     +G    A+
Sbjct: 1400 GAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV 1459

Query: 241  ELQNEMMGRGLL 252
             L    MGRG L
Sbjct: 1460 CLFGTAMGRGTL 1471



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+ + I  +   Y T+I G   E K   +  + +EM +  L+ N V    L+  +   G+
Sbjct: 1080 MRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGD 1139

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EAL LLD M  + + +  VT+  L++GLCK      A     RM    +      YT 
Sbjct: 1140 FEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTV 1199

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LIDGLCK   ++ A  L   M K  + PD   Y++LI+G+ +  + K A  +  RM   G
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + L+   Y++L++   + G++ EA  ++  M   G   D   C  L+      G + EA 
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319

Query: 241  ELQNEMMGRGLLSGS 255
            +    M   GL+  S
Sbjct: 1320 KFLCHMSRIGLVPNS 1334



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 35/290 (12%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+   ++ +   YGT++ GLC   KFE +K LL  M+ N +    +  T L+D   K G 
Sbjct: 1150 MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGM 1209

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA+ L+  M    +   V+T+  LI+G C+ G ++ A +   RM   GL  N  +Y+ 
Sbjct: 1210 LDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYST 1269

Query: 121  LIDGLCKK-------------NC----------------------IERARNLFDEMPKRD 145
            LI   C+              NC                      +  A      M +  
Sbjct: 1270 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG 1329

Query: 146  MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            ++P++  Y  +I+GY        A +  + M + G       Y SL+ GL + G+L EA+
Sbjct: 1330 LVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAK 1389

Query: 206  VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
               + +       D ++  +LL +  + GN+ EA+ L ++M+   +L  S
Sbjct: 1390 KFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 1439



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 1/240 (0%)

Query: 12   LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            +Y T+I+  C      ++  + + M  NG  A+   C  L+ +  + G+  EA   L  M
Sbjct: 1266 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 1325

Query: 72   LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
                +    +T+  +I+G    G    A  +F  M   G HP+   Y +L+ GLCK   +
Sbjct: 1326 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 1385

Query: 132  ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
              A+   + +       D+  Y  L+    K  +  EA+ L ++M +  V  D   Y+SL
Sbjct: 1386 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 1445

Query: 192  VWGLSRCGHLQEARVLFHEMIGRGIL-PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            + GL R G    A  LF   +GRG L P+ ++   L+    + G+   A     EMM +G
Sbjct: 1446 LTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKG 1505



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 112/251 (44%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+   +  +L  Y  ++ G   +        L S M   G+  + +   +L+    K+G 
Sbjct: 1536 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 1595

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            P   + LL +M+         TF +LI+   +SG +R+A D    M   G+ P+   Y  
Sbjct: 1596 PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 1655

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            + +GL KK+    +  +  EM +  +IP    Y  LI+G  +    + A  LK+ M  +G
Sbjct: 1656 IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALG 1715

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                  A +++V GL  CG  ++A ++   M+   +LP      +L+ +      + EA+
Sbjct: 1716 FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEAL 1775

Query: 241  ELQNEMMGRGL 251
            +L+  M   GL
Sbjct: 1776 KLKGVMELCGL 1786



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 95/212 (44%)

Query: 40   GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
            G   +   C  ++ +  K        SL  EM D  I   V TF +LI+GLC  G +++A
Sbjct: 944  GFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKA 1003

Query: 100  IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
             +   +M + G  P +  Y  L++  CKK   + A  L D M  + +  D   Y   ID 
Sbjct: 1004 GNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDN 1063

Query: 160  YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
               +    +A  L  +M +  +  +   Y +L+ G  + G +  A  +F+EM    + P+
Sbjct: 1064 LCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPN 1123

Query: 220  EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +   +L+  H   G+ +EA+ L + M   GL
Sbjct: 1124 CVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 1155



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 10/221 (4%)

Query: 32   LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
            L  EM + G+  N      L++     G   +A +LL +M ++    T+VT+  L++  C
Sbjct: 971  LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 1030

Query: 92   KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
            K G  + AI+    M   G+  +V  Y   ID LC  +   +A  L  +M K  + P+  
Sbjct: 1031 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 1090

Query: 152  AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             Y  LI+G++K      A  + N M++  +  +   Y +L+ G    G  +EA  L   M
Sbjct: 1091 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 1150

Query: 212  IGRGILPDEILCISLLK---KHYERGNMDEAIELQNEMMGR 249
               G+  +E+   +LL    KH       E  EL   ++ R
Sbjct: 1151 EAAGLRLNEVTYGTLLNGLCKH-------EKFELAKRLLER 1184



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y T+I G+C     + +  L  EM+  G  ++ V  + ++      G+  +A+ +LD ML
Sbjct: 1688 YITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHML 1747

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              R+  T+ TF  L+   C+   + EA+   G M   GL  +V  Y  LI G+C      
Sbjct: 1748 RMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSA 1807

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDG 159
             A  L++EM  RD+ P+ T Y  L+D 
Sbjct: 1808 AAFELYEEMRHRDLCPNITTYAVLVDA 1834



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%)

Query: 63   EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            E+  +L EML++ +      +  LI+G+C+ G ++ A      M   G   +    +A++
Sbjct: 1668 ESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMV 1727

Query: 123  DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
             GL      E A  + D M +  ++P    +T L+  + +     EAL LK  M   G+ 
Sbjct: 1728 RGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLK 1787

Query: 183  LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            LD+ AY  L+ G+   G    A  L+ EM  R + P+      L+       N+ +  +L
Sbjct: 1788 LDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKL 1847

Query: 243  QNEMMGRGLLS 253
              ++  RGL+S
Sbjct: 1848 LTDLQERGLIS 1858



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 35/200 (17%)

Query: 82   TFCVLIDGLCKSGLVREAID-----------------------------------YFGRM 106
             F +LI    K G++  A++                                    F  M
Sbjct: 916  VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 107  PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
             D G+ PNV  +  LI+GLC +  +++A NL  +M +   +P    Y  L++ Y K   +
Sbjct: 976  SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035

Query: 167  KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
            K A+ L + M   G++ D+  Y   +  L       +A +L  +M    I P+E+   +L
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 1095

Query: 227  LKKHYERGNMDEAIELQNEM 246
            +    + G +  A ++ NEM
Sbjct: 1096 INGFVKEGKIGVAAQVFNEM 1115



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%)

Query: 14   GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
              ++ GL    K ED+ L+L  M    L       TTLM  + +  + +EAL L   M  
Sbjct: 1724 SAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMEL 1783

Query: 74   SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
              +++ VV + VLI G+C +G    A + +  M    L PN+  Y  L+D +   N + +
Sbjct: 1784 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQ 1843

Query: 134  ARNLFDEMPKRDMI 147
               L  ++ +R +I
Sbjct: 1844 GEKLLTDLQERGLI 1857


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 131/247 (53%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  ++      ++ L    +  ++K + + ++ENGL  ++V    +M  Y K G+
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++LL EM+ +  E  V+    LID L K+G V EA   F RM D  L P V  Y  
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GL K+  +++A  LF+ M ++   P+T ++  L+D + K++  + AL + ++MT + 
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y ++++GL +   +  A   FH++  + + PD +   +LL    + G + +AI
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAI 701

Query: 241 ELQNEMM 247
            +  + M
Sbjct: 702 SIARDFM 708



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 116/242 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL  Y  +I  LC   + E++K L  +MK NG   + VI  TL+D +   G+        
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M        VVTF +L+D LCK+    EA   F  M   G+ PN+  Y  LI GL + 
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             IE A  L   M    + P    Y   ID + K     +A+    +M   G+  ++ A 
Sbjct: 416 GRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            + ++ L+  G L+EA+ +F+ +   G+ PD +    ++K + + G +DEA+ L +EM+ 
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535

Query: 249 RG 250
            G
Sbjct: 536 NG 537



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            I   L  Y  +I  L      E +  L  +MK  G   +      L+  + K+G+ +E  
Sbjct: 784  ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELF 843

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             L  EM+  R +   +T+ ++I  L KS  + +A+D+F  +      P    Y  LIDGL
Sbjct: 844  ELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGL 903

Query: 126  CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
             K   +E A  LF+EM      P+   +  LI+GY K    + A  L  RM   G+  DL
Sbjct: 904  AKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDL 963

Query: 186  NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +YT LV  L   G + EA   F+E+   G+ PD I    ++    +   M+EA+ L NE
Sbjct: 964  KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNE 1023

Query: 246  MMGRGLL 252
            M  RG++
Sbjct: 1024 MRNRGIV 1030



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 111/231 (48%), Gaps = 6/231 (2%)

Query: 22   IESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
            I   FE  K ++S   K + +T N VI +       K+    +AL    +++ S    T 
Sbjct: 839  ITELFELYKEMISRRCKPDAITYNIVISSLA-----KSNNLDKALDFFYDLVSSDFRPTP 893

Query: 81   VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
             T+  LIDGL K G + EA+  F  M D+G  PN A++  LI+G  K    E A  LF  
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 141  MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
            M    + PD  +YT L+D         EAL   N +   G+D D  AY  ++ GL +   
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 201  LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++EA  L++EM  RGI+PD     SL+      G +++A  +  E+   GL
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGL 1064



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 113/250 (45%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  +  K D   Y  +I  L   +  + +     ++  +           L+D   K G 
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA+ L +EM D   +     F +LI+G  K G    A   F RM + G+ P++  YT 
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L+D LC    ++ A   F+E+    + PD  AY  +I+G  K +  +EAL L N M   G
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +  DL  Y SL+  L   G +++A+ ++ E+   G+ PD     +L++ +    N + A 
Sbjct: 1029 IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAY 1088

Query: 241  ELQNEMMGRG 250
             +   MM  G
Sbjct: 1089 TVYKNMMVDG 1098



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 112/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    K D  +Y T++         +  K   S+M+ +G   + V  T L+D   KA +
Sbjct: 323 MKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARD 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +  D M    I   + T+  LI GL ++G + +A+   G M   G+ P    Y  
Sbjct: 383 FDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNI 442

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            ID   K     +A   F++M  + ++P+  A  A +    +    +EA  + N + E G
Sbjct: 443 FIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENG 502

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  ++   S+ G + EA  L  EMI  G  PD I+  SL+   Y+ G +DEA 
Sbjct: 503 LAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAW 562

Query: 241 ELQNEM 246
           ++ + M
Sbjct: 563 QMFDRM 568



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 114/252 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K  L  Y  ++  L  +   E   +LL EM++ GL  N    T  +    +AG+
Sbjct: 218 MVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGK 277

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +   M D      +VT+ VLID LC +G +  A + F +M   G  P+  +Y  
Sbjct: 278 IDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYIT 337

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D       ++  +  + +M     +PD   +T L+D   K   F EA    + M + G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +L+ Y +L+ GL R G +++A  L   M   G+ P        +    + G   +A+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAV 457

Query: 241 ELQNEMMGRGLL 252
           E   +M  +G++
Sbjct: 458 ETFEKMKAKGIV 469



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 115/249 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      D+  +  ++  LC    F+++      M++ G+  N     TL+    +AG 
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL LL  M    ++ T  T+ + ID   KSG   +A++ F +M   G+ PN+    A
Sbjct: 418 IEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +  L +   +  A+ +F+ + +  + PD+  Y  ++  Y K     EA+NL + M   G
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+    SL+  L + G + EA  +F  M    + P  +   +LL    + G + +AI
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597

Query: 241 ELQNEMMGR 249
           EL   M+ +
Sbjct: 598 ELFESMIEK 606



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 115/246 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  +L  Y T+I GL    + ED+  LL  M+  G+          +D + K+GE
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGE 452

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+   ++M    I   +V     +  L + G +REA   F  + + GL P+   Y  
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    K   ++ A NL  EM +    PD     +LID   K     EA  + +RM ++ 
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +L+ GL + G +Q+A  LF  MI +   P+ I   +LL    +   ++ A+
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELAL 632

Query: 241 ELQNEM 246
           ++ ++M
Sbjct: 633 KMFSKM 638



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           L +  K ED   +   M++  +  +     T+  A    G   +  ++L++M  +   + 
Sbjct: 132 LRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLN 191

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
             ++  LI  L +SG   EA++ + RM   GL P++  Y+AL+  L KK   E    L  
Sbjct: 192 AYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLK 251

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM    + P+   +T  I    +     EA  +  RM + G   DL  YT L+  L   G
Sbjct: 252 EMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAG 311

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L+ A+ LF +M   G  PD+++ I+LL K  + G++D   E  ++M   G +
Sbjct: 312 QLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 35/214 (16%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            YG +I GL    + E++  L  EM + G   N  I   L++ Y K G+   A  L   M+
Sbjct: 896  YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN--- 129
            +  I   + ++ +L+D LC +G V EA+ YF  +   GL P+   Y  +I+GL K     
Sbjct: 956  NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015

Query: 130  --------------------------------CIERARNLFDEMPKRDMIPDTTAYTALI 157
                                             +E+A+ +++E+    + PD   Y ALI
Sbjct: 1016 EALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075

Query: 158  DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             GY   E+ + A  +   M   G + ++  Y  L
Sbjct: 1076 RGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 104/252 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ DL  Y TI   L I         +L++M++ G   N      L+    ++G 
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL +   M+   ++ ++ T+  L+  L K       +     M D GL PNV  +T 
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I  L +   I+ A  +F  M      PD   YT LID        + A  L  +M   G
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +L+   +  G L   +  + +M   G +PD +    L+    +  + DEA 
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387

Query: 241 ELQNEMMGRGLL 252
              + M  +G+L
Sbjct: 388 ATFDVMRKQGIL 399


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 124/261 (47%), Gaps = 35/261 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  N K ++  Y  +I G C E K   +++L   MKE GL  NT   TTL+D + KAG 
Sbjct: 376 IRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGN 435

Query: 61  PS-----------------------------------EALSLLDEMLDSRIEVTVVTFCV 85
            S                                   EA  LL+    ++IE   VT+ +
Sbjct: 436 FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTI 495

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI   CK   + +A+ +  +M   G  P++ +YT LI   C++N ++ +  LFDE+ K  
Sbjct: 496 LISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLG 555

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P    YT++I GY + +    A+    +M++ G   D  +Y +L+ GL +   L EAR
Sbjct: 556 LAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEAR 615

Query: 206 VLFHEMIGRGILPDEILCISL 226
            L+  MI +G+ P E+  ++L
Sbjct: 616 QLYDTMIDKGLSPCEVTRVTL 636



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 116/245 (47%), Gaps = 1/245 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  II G C      ++   + EM E G   +    T ++ A+ +   
Sbjct: 235 MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 294

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+    ++    +   ++ +  +I GLCK G V++A +    M   G  PNV  +T+
Sbjct: 295 VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 354

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI GLCKK   ERA  LF ++ + D   P+   YTA+I GY K E    A  L  RM E 
Sbjct: 355 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 414

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  + N YT+L+ G  + G+  +A  L   M   G  P+     S++    +RG  +EA
Sbjct: 415 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEA 474

Query: 240 IELQN 244
            +L N
Sbjct: 475 FKLLN 479



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 111/240 (46%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I GLC     + +  LL EM +NG   N    T+L+    K G    A  L  +++
Sbjct: 317 YSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLI 376

Query: 73  DS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            S   +  V T+  +I G CK   +  A   F RM + GL PN   YT LIDG CK    
Sbjct: 377 RSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNF 436

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            +A  L + M      P+T  Y +++DG  K    +EA  L N   +  ++ D   YT L
Sbjct: 437 SKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTIL 496

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    +   + +A V  ++M   G  PD  L  +L+     +  M ++ +L +E++  GL
Sbjct: 497 ISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGL 556



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 1/245 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           K ++  + ++I GLC +   E + +L L  ++ +    N    T ++  Y K  + S A 
Sbjct: 346 KPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAE 405

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L + M +  +     T+  LIDG CK+G   +A +    M + G  PN   Y +++DGL
Sbjct: 406 MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGL 465

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+   E A  L +   +  +  D   YT LI    K     +AL   N+M +VG   D+
Sbjct: 466 CKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDI 525

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
           + YT+L+    R   ++++  LF E+I  G+ P +    S++  +     +  A++   +
Sbjct: 526 HLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQK 585

Query: 246 MMGRG 250
           M   G
Sbjct: 586 MSDHG 590



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 1/225 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  EM   G+  ++     ++  Y + G   EA   + EM++    V   T  ++I   C
Sbjct: 231 VFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFC 290

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           +  LV  A+ +F ++   GL PN+  Y+++I GLCK+  +++A  L +EM K    P+  
Sbjct: 291 EKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVY 350

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEV-GVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            +T+LI G  K    + A  L  ++        +++ YT+++ G  +   L  A +LF  
Sbjct: 351 THTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFER 410

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           M  +G++P+     +L+  H + GN  +A EL   M   G    +
Sbjct: 411 MKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNT 455



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 3/217 (1%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
            I+AD   Y  +I   C  +    + + L++M + G   +  + TTL+ A+ +     ++
Sbjct: 485 QIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDS 544

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             L DE++   +  T  T+  +I G C+   V  A+ +F +M D G  P+   Y ALI G
Sbjct: 545 EKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISG 604

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK++ ++ AR L+D M  + + P       L   Y K E F  A+ +  R+ +    L 
Sbjct: 605 LCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNK---KLW 661

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +    +L+  L     +  A + FH+++ + +  D +
Sbjct: 662 IRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRV 698



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 74/157 (47%)

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G ++EA+D    M + GL     V   +I    +   +E A N+FDEM  R + PD+  Y
Sbjct: 188 GKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTY 247

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             +I GY ++ +  EA      M E G  +D    T ++        +  A   FH++  
Sbjct: 248 KYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK 307

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G+ P+ I   S++    +RG++ +A EL  EM+  G
Sbjct: 308 MGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNG 344



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 91/192 (47%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++  + + G+  EA+ ++ +M +  + +T      +I    +  LV  A + F  M   G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           ++P+   Y  +I G C+   +  A     EM +R  + D    T +I  + +      A+
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
              +++T++G+  +L  Y+S++ GL + G +++A  L  EM+  G  P+     SL+   
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 359

Query: 231 YERGNMDEAIEL 242
            ++G  + A  L
Sbjct: 360 CKKGWTERAFRL 371


>gi|260780430|gb|ACX50761.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780496|gb|ACX50794.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 188

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 95/178 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+     +  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGN 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVTF V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID + KH    EA+ L  RM E
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 185



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   ++ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 87/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+       + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  ++ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+   ++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 183



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+      ++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             + ++A+ L +RM + G   D+  ++ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGNVEDAIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G    A+   Y  II GLC+    E + +L  +M + G     V   TL++ Y   G 
Sbjct: 399 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 458

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  LLD M ++  E    T+  L+ G  K G +  A  YF  M + GL+PN   YTA
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   ++ A +L   M +    P+  +Y A+I+G  K   F EA  + ++M E G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  YT+L+ GL R G  Q A  +FH+M  R  LP+     SL+    + G  DEA 
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 638

Query: 241 ELQNEMMGRGL 251
            L  EM  +GL
Sbjct: 639 ILLKEMERKGL 649



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G   +    ++  LL  MKENG   +      L+  + K G+   A     EM+
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +    V++  LIDG  K G V  A+    RM + G +PNV  Y A+I+GL K+N   
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + D+M ++ ++P+   YT LIDG  ++   + A  + + M +     +L  Y+SL+
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +GL + G   EA +L  EM  +G+ PDE+   SL+      G +D A  L   M+  G
Sbjct: 626 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMG 683



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  Y ++I G C     + +  +   M + G   N+V  +TL++     G   EA
Sbjct: 228 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 287

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L +L+EM++  IE TV T+ + I  LC      EAI+   RM   G  PNV  YTALI G
Sbjct: 288 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 347

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L +   +E A  L+ +M K  ++P+T  Y ALI+       F  AL + + M   G   +
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 407

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y  ++ GL   G +++A VLF +M+  G LP  +   +L+  +  +GN++ A  L +
Sbjct: 408 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 467

Query: 245 EMMGRG 250
            M   G
Sbjct: 468 LMKENG 473



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 113/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+  +  Y   I  LC     E++  L++ MK+ G   N    T L+    + G+
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  +ML   +    VT+  LI+ LC  G    A+  F  M   G   N   Y  
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLC    IE+A  LF++M K   +P    Y  LI+GYL   +   A  L + M E G
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D   Y  LV G S+ G L+ A   F EM+  G+ P+ +   +L+  H + G +D A+
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533

Query: 241 ELQNEM 246
            L   M
Sbjct: 534 SLLKRM 539



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 102/219 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + D   Y  ++ G     K E +     EM E GL  N V  T L+D + K G+
Sbjct: 469 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGK 528

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              ALSLL  M +      V ++  +I+GL K     EA     +M + GL PNV  YT 
Sbjct: 529 VDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTT 588

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC+    + A  +F +M KR  +P+   Y++LI G  +     EA  L   M   G
Sbjct: 589 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 648

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  D   +TSL+ G    G +  A +L   M+  G  P+
Sbjct: 649 LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPN 687



 Score =  104 bits (260), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 117/240 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC+  +F  +  +   M+ +G  ANT     ++      G+  +A+ L ++ML
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 TVVT+  LI+G    G V  A      M + G  P+   Y  L+ G  K   +E
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F EM +  + P+  +YTALIDG+ K      AL+L  RM E+G + ++ +Y +++
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GLS+     EA  +  +M+ +G+LP+ I   +L+      G    A ++ ++M  R  L
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 615



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 120/230 (52%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E ++ L  +M  +G+  + +   TL++   K G+  EA  +L ++    +   V T+  L
Sbjct: 180 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 239

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I G C++  +  A   F RM   G  PN   Y+ LI+GLC +  ++ A ++ +EM ++ +
Sbjct: 240 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 299

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P    YT  I      E  +EA+ L  RM + G   ++  YT+L+ GLSR G L+ A  
Sbjct: 300 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 359

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           L+H+M+  G++P+ +   +L+ +    G    A+++ + M G G L+ ++
Sbjct: 360 LYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 1/188 (0%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL-VREAIDYFGRMPDFGLHPNVAVYTALID 123
           +S+L+ ++  R+        +L+   C++   +R   D+   +   G   ++     L+ 
Sbjct: 112 ISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLI 171

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            L K   +E ARNL+ +M    + P    +  LI+   K    +EA  + +++ +  +  
Sbjct: 172 QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP 231

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  YTSL+ G  R  +L  A  +F  M+  G  P+ +   +L+      G +DEA+++ 
Sbjct: 232 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 291

Query: 244 NEMMGRGL 251
            EM+ +G+
Sbjct: 292 EEMIEKGI 299



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 6/132 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    +L  Y ++I+GLC E K +++++LL EM+  GL  + V  T+L+D +   G 
Sbjct: 609 MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGR 668

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE------AIDYFGRMPDFGLHPN 114
              A  LL  M+D   +    T+ VL+ GL K  L+ E        +YF       LH  
Sbjct: 669 IDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEKIFPLVDNYFLGCNPLQLHRP 728

Query: 115 VAVYTALIDGLC 126
           + V +   + +C
Sbjct: 729 INVVSPHKETIC 740


>gi|341605723|gb|AEK82964.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LI GL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LI G  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIXGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRM 183



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIXGLGKAGRIDEAERLFEEMSEKG 152


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 129/264 (48%), Gaps = 17/264 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y  +I  LC  SK E +  L  EMK NG+  +  + TTL+D++ KAG 
Sbjct: 213 MMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGF 272

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +  DEM        VVT+  LI    KS  V +A + +  M   G  PN+  YTA
Sbjct: 273 IEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTA 332

Query: 121 LIDGLCKKNCIERARNLFD-------EMPKRDMI----------PDTTAYTALIDGYLKH 163
           LIDGLCK   IE+A  ++        E+P  DM           P+   Y AL+DG  K 
Sbjct: 333 LIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKA 392

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
              KEA +L   M+  G + +   Y +L+ G  + G L EA+ +F  M+  G  P+    
Sbjct: 393 YQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTY 452

Query: 224 ISLLKKHYERGNMDEAIELQNEMM 247
            SL+ + ++   +D A+++ ++M+
Sbjct: 453 SSLIDRLFKDKRLDLALKVLSKML 476



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 128/302 (42%), Gaps = 52/302 (17%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  D+ +Y T+I   C     E ++    EM+ +G   N V  T L+ AY K+ +
Sbjct: 248 MKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRK 307

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-------PDFGLH- 112
            S+A  + + ML       +VT+  LIDGLCK+G + +A   +  M       PD  +H 
Sbjct: 308 VSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHF 367

Query: 113 --------------------------------------------PNVAVYTALIDGLCKK 128
                                                       PN  VY ALIDG CK 
Sbjct: 368 RVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKA 427

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A+ +F  M +    P+   Y++LID   K +    AL + ++M E     ++  Y
Sbjct: 428 GKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIY 487

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T ++ GL + G   EA  L   M  +G  P+ +   +++    + G +++ +EL  +M  
Sbjct: 488 TEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSS 547

Query: 249 RG 250
           +G
Sbjct: 548 KG 549



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 10/216 (4%)

Query: 12  LYGTIIWGLCIESKFEDSKLLL-------SEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +Y  +I G+C  S  E  K +L        EM E G+  N V  +         G+  +A
Sbjct: 149 VYNILIGGIC--SSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKA 206

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
            +++ EM+         T+  +I  LC +  V +A   F  M   G+ P+V VYT LID 
Sbjct: 207 YNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK   IE+ARN FDEM +    P+   YTALI  YLK     +A  +   M   G   +
Sbjct: 267 FCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPN 326

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI-LPD 219
           +  YT+L+ GL + G +++A  ++  M    + +PD
Sbjct: 327 IVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPD 362



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 101/209 (48%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G + + ++  YG ++ GLC   + ++++ LL  M   G   N V+   L+D   KAG+  
Sbjct: 372 GASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLD 431

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA  +   ML+   +  V T+  LID L K   +  A+    +M +    PNV +YT +I
Sbjct: 432 EAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMI 491

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK    + A  L   M ++   P+   YTA+IDG+ K    ++ L L  +M+  G  
Sbjct: 492 DGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCA 551

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +   Y  L+      G L EA  L  EM
Sbjct: 552 PNFVTYRVLINHCCSTGLLDEAHKLLEEM 580



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 115/263 (43%), Gaps = 17/263 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLT-----------------A 43
           M  K    ++  Y  +I GLC   K E +  +   MK+  +                   
Sbjct: 318 MLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEP 377

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           N      L+D   KA +  EA  LL  M     E   V +  LIDG CK+G + EA + F
Sbjct: 378 NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVF 437

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
             M + G  PNV  Y++LID L K   ++ A  +  +M +    P+   YT +IDG  K 
Sbjct: 438 TTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKV 497

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               EA  L   M E G + ++  YT+++ G  + G +++   L  +M  +G  P+ +  
Sbjct: 498 GKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTY 557

Query: 224 ISLLKKHYERGNMDEAIELQNEM 246
             L+      G +DEA +L  EM
Sbjct: 558 RVLINHCCSTGLLDEAHKLLEEM 580



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 2/246 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K ++++ + + M E G   N    ++L+D  FK      AL +L +M
Sbjct: 416 VYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKM 475

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L++     VV +  +IDGLCK G   EA      M + G +PNV  YTA+IDG  K   +
Sbjct: 476 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRV 535

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E+   L  +M  +   P+   Y  LI+         EA  L   M +      +  Y  +
Sbjct: 536 EKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKV 595

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G +R      +  L  E+     +P   +   L+    + G ++ A+EL  E+     
Sbjct: 596 IEGFNR--EFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSP 653

Query: 252 LSGSKN 257
            S +  
Sbjct: 654 FSAANQ 659



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 7/256 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +   ++  Y  ++ G   + K    K +LS M   G   +  I  +L+ AY ++G+
Sbjct: 68  MRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGD 127

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS-----GLVREAIDYFGRMPDFGLHPNV 115
            + A  LL +M+    +   V + +LI G+C S      ++  A   +G M + G+  N 
Sbjct: 128 YAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNK 187

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES-FKEALNLKN 174
              +     LC     E+A N+  EM  +  IPDT+ Y+ +I GYL + S  ++A  L  
Sbjct: 188 VNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVI-GYLCNASKVEKAFQLFQ 246

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M   G+  D+  YT+L+    + G +++AR  F EM   G  P+ +   +L+  + +  
Sbjct: 247 EMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSR 306

Query: 235 NMDEAIELQNEMMGRG 250
            + +A E+   M+ +G
Sbjct: 307 KVSKANEVYEMMLSKG 322



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 110/261 (42%), Gaps = 40/261 (15%)

Query: 22  IESKFEDSKL-----LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           I+  F+D +L     +LS+M EN    N VI T ++D   K G+  EA  L+  M +   
Sbjct: 456 IDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGC 515

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
              VVT+  +IDG  KSG V + ++   +M   G  PN   Y  LI+  C    ++ A  
Sbjct: 516 NPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHK 575

Query: 137 LFDEMPK---------------------------------RDMIPDTTAYTALIDGYLKH 163
           L +EM +                                  D +P    Y  LID ++K 
Sbjct: 576 LLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKA 635

Query: 164 ESFKEALNLKNRMTEVG--VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
              + AL L   ++        + N + +L+  LS      +A  L+ +MI RG +P+  
Sbjct: 636 GRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELS 695

Query: 222 LCISLLKKHYERGNMDEAIEL 242
           + + L+K        +EA++L
Sbjct: 696 ILVHLIKGLLRVNRWEEALQL 716



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 8/201 (3%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           K+G+  EALSLL++          V +  +I GLC++ L  EA+D+  RM      PNV 
Sbjct: 22  KSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVL 78

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y  L+ G   K  + R + +   M      P    + +L+  Y +   +  A  L  +M
Sbjct: 79  TYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKM 138

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGH-----LQEARVLFHEMIGRGILPDEILCISLLKKHY 231
            + G       Y  L+ G+          L  A   + EM+  G++ +++   +  +   
Sbjct: 139 VQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLC 198

Query: 232 ERGNMDEAIELQNEMMGRGLL 252
             G  ++A  +  EMM +G +
Sbjct: 199 GIGKFEKAYNVIREMMSKGFI 219



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 86/234 (36%), Gaps = 70/234 (29%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y  +I GLC   K +++  L+  M+E G   N V  T ++D + K+G   + L LL
Sbjct: 483 NVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELL 542

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLV----------------------REAIDYFGRM 106
            +M         VT+ VLI+  C +GL+                      R+ I+ F R 
Sbjct: 543 QQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNRE 602

Query: 107 PDFGLH-----------PNVAVYTALIDGLCKKNCIE----------------------- 132
               L+           P   VY  LID   K   +E                       
Sbjct: 603 FIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIH 662

Query: 133 --------------RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
                         +A  L+ +M  R  IP+ +    LI G L+   ++EAL L
Sbjct: 663 ITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQL 716



 Score = 44.3 bits (103), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 3/131 (2%)

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK     + R     + K + +PDT  YT +I G  +   F+EA++   RM       
Sbjct: 19  SLCKSG---KWREALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLP 75

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y  L+ G      L   + +   MI  G  P   +  SL+  +   G+   A +L 
Sbjct: 76  NVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLL 135

Query: 244 NEMMGRGLLSG 254
            +M+  G   G
Sbjct: 136 KKMVQCGCQPG 146


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +++ +L +Y  +I GLC +    D+  L S++ E G+  + V   +L+D     G 
Sbjct: 186 MEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LL +M+   ++    TF +LID LCK G + EA      M   G  P++  Y A
Sbjct: 246 WQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G C +  +  AR LF+ M KR + PD   Y  LIDGY K +   EA+ L   +    
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   + +Y SL+ GL   G +   + L  EM G    PD +    L+    + G + EA+
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425

Query: 241 ELQNEMMGRGL 251
            +   MM +G+
Sbjct: 426 GVLVMMMKKGV 436



 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 119/247 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y  +I G C     +++ +L  E+    L        +L+D    +G 
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S    LLDEM  S     VVT+ +LID LCK G + EA+     M   G+ PN+  Y A
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG C +N +  A+++F+ M K  + PD   Y  LI+GY K E   EA+ L   M    
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ +Y SL+ GL   G +   + L  EM   G  PD I    LL    +    D+AI
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAI 565

Query: 241 ELQNEMM 247
            L  +++
Sbjct: 566 SLFRQIV 572



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 125/253 (49%), Gaps = 2/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  D   +  +I  LC E +  +++ +L+ M + G   + V    LM+ Y     
Sbjct: 256 MVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L + M+   +E  V+ + VLIDG CK+ +V EA+  F  + +  L P +A Y +
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNS 375

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC    I   + L DEM      PD   Y  LID   K     EAL +   M + G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM-DEA 239
           V  ++  Y +++ G     ++  A+ +F+ M+  G+ PD IL  ++L   Y +  M DEA
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPD-ILNYNVLINGYCKTEMVDEA 494

Query: 240 IELQNEMMGRGLL 252
           I L  EM  + L+
Sbjct: 495 IVLFKEMRHKNLI 507



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GL    + + +  LL EM+++ +  N V+ + L+D   K G  S+AL L  ++ 
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I +  VT+  LIDG C  G  +E      +M    + P+   +  LID LCK+  I 
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +   M KR   PD   Y AL++GY   E+  EA  L NRM + G++ D+  Y  L+
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + EA VLF E+  + ++P      SL+      G +    +L +EM G  
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSA 400



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 117/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ G C      +++ L + M + GL  + +    L+D Y K   
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  E+ +  +  T+ ++  LIDGLC SG +         M      P+V  Y  
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK+  I  A  +   M K+ + P+   Y A++DGY    +   A ++ NRM + G
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  Y  L+ G  +   + EA VLF EM  + ++PD     SL+      G +    
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530

Query: 241 ELQNEMMGRG 250
           EL +EM   G
Sbjct: 531 ELLDEMCDSG 540



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 34/291 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     D+  Y  +I  LC E +  ++  +L  M + G+  N V    +MD Y     
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  + + M+ S +E  ++ + VLI+G CK+ +V EAI  F  M    L P++A Y +
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE-- 178
           LIDGLC    I   + L DEM      PD   Y  L+D + K + F +A++L  ++ E  
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGI 575

Query: 179 --------------------------------VGVDLDLNAYTSLVWGLSRCGHLQEARV 206
                                            G   ++  YT L+  L + G   EA +
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
           L  +M      PD I    ++    +R   D+A +L+ EM+ RGL++  K+
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKS 686



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 35/255 (13%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++++  G++ +    T L++ YF     + A SLL  +L S  +  +VTF  +I+G C
Sbjct: 77  LFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC 136

Query: 92  KSGLVREAIDY-----------------------------------FGRMPDFGLHPNVA 116
            +G++ +A+D+                                      M    + PN+ 
Sbjct: 137 INGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV 196

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +Y+ALIDGLCK   +  A  L  ++ +R ++ D   Y +LIDG      ++E   L  +M
Sbjct: 197 MYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM 256

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
               VD D   +  L+  L + G + EA+ +   M  RG  PD +   +L++ +  R N+
Sbjct: 257 VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENV 316

Query: 237 DEAIELQNEMMGRGL 251
            EA EL N M+ RGL
Sbjct: 317 HEARELFNRMVKRGL 331



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 119/247 (48%), Gaps = 2/247 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + +L  + TII G CI      +      +   G   +     TL++   K G+   AL 
Sbjct: 122 QPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALH 181

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL EM  S ++  +V +  LIDGLCK G V +A+    ++ + G+  +   Y +LIDG C
Sbjct: 182 LLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCC 241

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    L  +M + ++ PD   +  LID   K     EA  +   M++ G   D+ 
Sbjct: 242 SVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIV 301

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM-DEAIELQNE 245
            Y +L+ G     ++ EAR LF+ M+ RG+ PD +L  ++L   Y +  M DEA+ L  E
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPD-VLNYNVLIDGYCKTKMVDEAMVLFKE 360

Query: 246 MMGRGLL 252
           +  + L+
Sbjct: 361 LCNKNLV 367



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 89/190 (46%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A++  + M+          F  L+  + + G    AI  F ++   G+ P++A +T LI
Sbjct: 38  DAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILI 97

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +    ++    A +L   + K    P+   +  +I+G+  +    +AL+    +   G  
Sbjct: 98  NCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYL 157

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   Y +L+ GLS+ G ++ A  L  EM    + P+ ++  +L+    + G + +A+ L
Sbjct: 158 FDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGL 217

Query: 243 QNEMMGRGLL 252
            +++  RG+L
Sbjct: 218 CSQIGERGIL 227



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/156 (21%), Positives = 67/156 (42%)

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           C+   V +A+  F RM      P  +V+  L+  + +      A +LF ++  + + P  
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             +T LI+ Y        A +L   + + G   +L  + +++ G    G + +A      
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           ++ +G L D+    +L+    + G +  A+ L  EM
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 125/240 (52%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++  LC + +   +  LL  M++ G+  + V   TL+     A +   A+ LL+EM 
Sbjct: 97  YTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMC 156

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S IE  VV +  L+ G CK+G        F  M   G+ P+V +YTALID LC+   ++
Sbjct: 157 ESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVK 216

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + D M +R + P+   Y  LI+   K  S +EAL+L+  M+E GV  D+  Y +L+
Sbjct: 217 KAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLI 276

Query: 193 WGLSRCGHLQEARVLFHEMIG--RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GLS    + EA  L  EM+     + PD +   S++    + G M +A++++  M   G
Sbjct: 277 TGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENG 336



 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 119/238 (50%), Gaps = 3/238 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTA---NTVICTTLMDAYFKAGEPSEALSLLD 69
           Y T++  LC +   + +  LL  M      A   N +  TTLM A       ++A+ LL 
Sbjct: 59  YNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLR 118

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
            M D  +   VVT+  LI GLC +  V  A++    M + G+ PNV VY+ L+ G CK  
Sbjct: 119 SMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTG 178

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
             E    +F+EM  R + PD   YTALID   +H   K+A  + + MTE G++ ++  Y 
Sbjct: 179 RWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYN 238

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            L+  + + G ++EA  L   M  +G+ PD +   +L+        MDEA+ L  EMM
Sbjct: 239 VLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM 296



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 10/261 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  YGT+I GLC  +  + +  LL+EM E+G+  N V+ + L+  Y K G 
Sbjct: 120 MQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGR 179

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 + +EM    IE  VV +  LID LC+ G V++A      M + GL PNV  Y  
Sbjct: 180 WESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNV 239

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT--E 178
           LI+ +CK+  +  A +L   M ++ + PD   Y  LI G        EA+ L   M   E
Sbjct: 240 LINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGE 299

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG----ILPDEILCISLLKKHYERG 234
             V  DL  + S++ GL + G +++A  +   M   G    ++   +L   LL+ H    
Sbjct: 300 TRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVH---- 355

Query: 235 NMDEAIELQNEMMGRGLLSGS 255
            + +A+EL +EM   GL   S
Sbjct: 356 KVKKAMELMDEMASSGLQPDS 376



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 120/250 (48%), Gaps = 2/250 (0%)

Query: 1   MKGKN-IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M+G+  ++ DL  + ++I GLC       +  + + M ENG   N V    L+    +  
Sbjct: 296 MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVH 355

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  +A+ L+DEM  S ++    T+ +LI+G CK   V  A  Y   M   G+ P    Y 
Sbjct: 356 KVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYI 415

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+  +C +  + +AR+LF+EM  R+   D  AY+ +I G  K    K A      M + 
Sbjct: 416 PLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDE 474

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D   Y+  +   ++ G L  A  +  +M   G +PD  +  SL++ +  +G+ ++ 
Sbjct: 475 GLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKI 534

Query: 240 IELQNEMMGR 249
           +EL  EM  +
Sbjct: 535 LELTREMTAK 544



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 128/288 (44%), Gaps = 36/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++  Y  +I  +C E    ++  L   M E G+  + V   TL+       E
Sbjct: 225 MTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLE 284

Query: 61  PSEALSLLDEML--DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
             EA++LL+EM+  ++R+   ++TF  +I GLCK G +R+A+     M + G   N+  +
Sbjct: 285 MDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAF 344

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             LI GL + + +++A  L DEM    + PD+  Y+ LI+G+ K    + A +  + M  
Sbjct: 345 NLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRH 404

Query: 179 VGVD----------------------------------LDLNAYTSLVWGLSRCGHLQEA 204
            G++                                  LD  AY++++ G  + G  + A
Sbjct: 405 QGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIA 464

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                +MI  G++PD +     +    + G++  A  +  +M   G +
Sbjct: 465 EEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFV 512



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 10/231 (4%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM-----LDSRIEVTV 80
             +S  LLS +       + V   T++ A  + G    AL LL  M     L SR     
Sbjct: 40  LPESPALLSALPS---VRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASR--PNA 94

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           +++  L+  LC      +A+     M D G+ P+V  Y  LI GLC    ++ A  L +E
Sbjct: 95  ISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNE 154

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M +  + P+   Y+ L+ GY K   ++    +   M+  G++ D+  YT+L+  L R G 
Sbjct: 155 MCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGK 214

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +++A  +   M  RG+ P+ +    L+    + G++ EA++L+  M  +G+
Sbjct: 215 VKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGV 265



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 12/237 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D   Y  +I G C   + E ++  LSEM+  G+    V    L+ A    G 
Sbjct: 367 MASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGM 426

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L +EM D   ++    +  +I G  KSG  + A ++   M D GL P+   Y+ 
Sbjct: 427 MGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSI 485

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+   K   +  A  +  +M     +PD   + +LI GY      ++ L L   MT   
Sbjct: 486 PINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKD 545

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVL-----FHEMIGRG--ILPDEILCISLLKKH 230
           V LD    +++V  L     ++  ++L     F   I +G  I P +++  ++L+KH
Sbjct: 546 VALDPKIISTIVTSLG--ASIEGQKLLQSLPGFDTEISKGDVISPHDVM--NMLQKH 598


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 122/246 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K DL  Y  +I GLC     E++  L  EM    +  N+ +C+ ++   F+ G  SEA 
Sbjct: 441 LKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQ 500

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              D +  S +   ++ + ++IDG  K G + EA+  + ++ + G+ P +  + +LI G 
Sbjct: 501 MYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGF 560

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CKK  +  A  L D +    ++P +  YT L++GY +        ++ + M    +    
Sbjct: 561 CKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQ 620

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT +V GL + G L E+  L   M  RG+ PD+I   ++++   +  ++ +A +L N+
Sbjct: 621 ITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQ 680

Query: 246 MMGRGL 251
           M+   L
Sbjct: 681 MLQHSL 686



 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 126/246 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  DL  Y  +I G C     E+S  L  +M   GL  + V  T L+ +  K+G   EA+
Sbjct: 371 LNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAV 430

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL EM    ++  ++T+ VLI GLCK G V EAI+ +  M    ++PN  V +A+I GL
Sbjct: 431 ILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGL 490

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            +K  I  A+  FD + K D+  +   Y  +IDGY K  +  EA+    ++ E G+   +
Sbjct: 491 FEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTI 550

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             + SL++G  + G L EA  L   +   G++P  +   +L+  + E G+M    ++ +E
Sbjct: 551 VTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHE 610

Query: 246 MMGRGL 251
           M  + +
Sbjct: 611 MEAKAI 616



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 129/284 (45%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I   +  + ++I+G C + K  ++  LL  +K +GL   +V  TTLM+ Y + G+   
Sbjct: 544 KGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHS 603

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              +L EM    I+ T +T+ V++ GLCK G + E++     M   GL P+   Y  +I 
Sbjct: 604 MFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQ 663

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             CK + +++A  L ++M +  + P    Y  LI+G   + + K+A  L   + +  + L
Sbjct: 664 SFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRL 723

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGR----------------------------- 214
              AYT+++      G +Q A V FH+M+ R                             
Sbjct: 724 TKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFF 783

Query: 215 ------GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                 GI PD+ +C+ +L   +  G+ +   E+   M+  GLL
Sbjct: 784 CMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLL 827



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 134/255 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +  G  I      +  ++  M  NGL  + V  T L+  + + G 
Sbjct: 331 MENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGN 390

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  L ++ML   +++++VT+ VL+  LCKSG + EA+     M   GL P++  Y+ 
Sbjct: 391 IEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSV 450

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK+  +E A  L++EM  + + P++   +A+I G  +  +  EA    + +T+  
Sbjct: 451 LIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSD 510

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y  ++ G ++ G++ EA   + ++I +GI P  +   SL+    ++G + EA+
Sbjct: 511 VAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAV 570

Query: 241 ELQNEMMGRGLLSGS 255
           +L + +   GL+  S
Sbjct: 571 KLLDTIKVHGLVPTS 585



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 116/240 (48%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I GLC +S+ +D+   L E        + V    LM  + K G    A S    M+   
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           +   V ++ +L+ GLC +G + EA+++   M + G+ P++  Y  L +G      I  A 
Sbjct: 301 LLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAW 360

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            +   M    + PD   YT LI G+ +  + +E+  LK +M   G+ L +  YT L+  L
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            + G + EA +L HEM   G+ PD +    L+    +RG ++EAIEL  EM  + +   S
Sbjct: 421 CKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNS 480



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 113/237 (47%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+     +  +  ++ G C     + +K     M + GL  +      L+     AG   
Sbjct: 263 GEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSME 322

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL   ++M +  +E  +VT+ +L +G    GL+  A     RM   GL+P++  YT LI
Sbjct: 323 EALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILI 382

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C+   IE +  L ++M  + +      YT L+    K     EA+ L + M  +G+ 
Sbjct: 383 CGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLK 442

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            DL  Y+ L+ GL + G ++EA  L+ EM  + I P+  +C +++   +E+G + EA
Sbjct: 443 PDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA 499



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 115/247 (46%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  ++ LY  +I G        ++     ++ E G++   V   +L+  + K G+ +EA
Sbjct: 510 DVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEA 569

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + LLD +    +  T VT+  L++G C+ G +    D    M    + P    YT ++ G
Sbjct: 570 VKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKG 629

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK+  +  +  L   M  R + PD   Y  +I  + K    ++A  L N+M +  +   
Sbjct: 630 LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS 689

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y  L+ GL   G+L++A  L   +  + I   ++   +++K H  +G++  A+   +
Sbjct: 690 PVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFH 749

Query: 245 EMMGRGL 251
           +M+ RG 
Sbjct: 750 QMVERGF 756



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 122/244 (50%), Gaps = 2/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  ++ GLC+    E++    ++M+ +G+  + V    L + +   G  S A  ++
Sbjct: 304 DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVV 363

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             ML + +   +VT+ +LI G C+ G + E+     +M   GL  ++  YT L+  LCK 
Sbjct: 364 QRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKS 423

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I+ A  L  EM    + PD   Y+ LI G  K  + +EA+ L   M    +  +    
Sbjct: 424 GRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVC 483

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER-GNMDEAIELQNEMM 247
           ++++ GL   G + EA++ F + + +  + +EI+  +++   Y + GN+ EA+    +++
Sbjct: 484 SAIISGLFEKGAISEAQMYF-DSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQII 542

Query: 248 GRGL 251
            +G+
Sbjct: 543 EKGI 546


>gi|224576625|gb|ACN56986.1| At1g03560-like protein [Capsella rubella]
 gi|224576631|gb|ACN56989.1| At1g03560-like protein [Capsella rubella]
 gi|224576633|gb|ACN56990.1| At1g03560-like protein [Capsella rubella]
          Length = 196

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 104/195 (53%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      GL  N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRN- 179

Query: 234 GNMDEAIELQNEMMGRGL 251
              +EA++L + M+ +G+
Sbjct: 180 ---EEALKLWDMMIDKGI 194



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 1/179 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        + + +  + +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            L K   +  A  LF  M + +    T   YT LI G  K    +EAL L + M + G+
Sbjct: 136 ALTKHGKVNEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGI 194



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 1/149 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NGL  N++  ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVNEAMTLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            LI G+ K +  E A  L+D M  + + P
Sbjct: 168 ILISGMFKDHRNEEALKLWDMMIDKGITP 196


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 125/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  +   Y T+I GLC+  +  +   +L   +  G     +   ++++ + KAG 
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++  +M    I   +VT+   IDG CK+     A+     +   GL P++A Y +
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C++  +  A  +   M K  ++P+ + Y + I GY   +  +EAL L  +M + G
Sbjct: 602 LIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEG 661

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +DLD   YT+L+ G S+ G++  A  L+ EM+ +G +PD I   +L       G++D+A 
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDAR 721

Query: 241 ELQNEM 246
           +L +EM
Sbjct: 722 KLLDEM 727



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K  +  Y +++   C+    +++  L +EM   G T N V  TTLM  +     
Sbjct: 412 MNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAA 471

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +LL EM  + +     T+  LI+GLC  G V E  +   R    G  P    Y +
Sbjct: 472 FDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G  K   +  A  ++ +M  + + P+   YT+ IDGY K      AL + N +   G
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ AY SL++G  + G++  A  +   M+  G+LP+  +  S +  +     M+EA+
Sbjct: 592 LRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651

Query: 241 ELQNEMMGRGL 251
            L  +M+  G+
Sbjct: 652 RLYEKMIKEGI 662



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 113/240 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G         +  +  +M   G+  N V  T+ +D Y K      AL +L+++ 
Sbjct: 529 YNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVR 588

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   +  +  LI G C+ G +  A+     M   GL PN++VY + I G      +E
Sbjct: 589 CKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMME 648

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L+++M K  +  DT  YT LIDG+ K  +   AL L + M   G   D   +T+L 
Sbjct: 649 EALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALT 708

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL R G + +AR L  EM    I P+ ++   L+  +   G + EA  L +EM+ R ++
Sbjct: 709 HGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIM 768



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 97/192 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ K ++ D+  Y ++I+G C E     +  +L  M ++GL  N  +  + +  Y     
Sbjct: 587 VRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKM 646

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L ++M+   I++   T+  LIDG  K G V  A+  +  M   G  P+   +TA
Sbjct: 647 MEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTA 706

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L  GLC+   I+ AR L DEM + D+ P+   Y  LI+GYL++   +EA  L + M E  
Sbjct: 707 LTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERK 766

Query: 181 VDLDLNAYTSLV 192
           +  D   Y  LV
Sbjct: 767 IMPDDTTYDILV 778



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ D  +    I  LC       + L+L +M++ G         +++D   K G 
Sbjct: 203 MPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGR 262

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL + DE+L +  +++VV    L+ G C    VR+A+D F      GL P    YT 
Sbjct: 263 MEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTV 322

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  ++   E+A  L  +M    ++P T  +  +I G L  + +K+A++L   M + G
Sbjct: 323 LIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG 382

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  L+  L +   ++EA  L+ +M   G+ P  +   SLL  +   G MDEA+
Sbjct: 383 IP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAV 441

Query: 241 ELQNEMMGRGL 251
           +L  EM G+G 
Sbjct: 442 KLYTEMPGKGF 452



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 11/244 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANT-----VICTTLMDAYFKAGEPSEALSL 67
           Y  +I G   E   E +  L  +M+++GL  +T     VI   L D  +K     +A+SL
Sbjct: 320 YTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWK-----DAVSL 374

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             EM DS I     T+ +LI  LC+   +REA++ + +M + G+ P +  Y +L+   C 
Sbjct: 375 FKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCV 433

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
             C++ A  L+ EMP +   P+   YT L+ G++   +F +A  L   M + GV  +   
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y +L+ GL   G + E   +       G +P  +   S++    + G M  A  +  +M 
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553

Query: 248 GRGL 251
            +G+
Sbjct: 554 AKGI 557



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 105/220 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y + I G C  S  + +  +L++++  GL  +     +L+  + + G 
Sbjct: 552 MCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGN 611

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL +L  ML   +   +  +   I G     ++ EA+  + +M   G+  + A YT 
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTT 671

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +  A  L+ EM  +  IPD   +TAL  G  ++    +A  L + M  + 
Sbjct: 672 LIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLD 731

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  ++  Y  L+ G  R G LQEA  L  EM+ R I+PD+
Sbjct: 732 IRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDD 771



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 104/221 (47%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
            M+  G+T +    T L+    ++   ++AL+LL EM      +    F V++    K G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
           +  +A+  F  MP   + P+  V +  I  LCK     RA  +  +M     +P    + 
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +++D  +K    +EAL++K+ +   G  + +   T+L+ G      +++A  +F E +  
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           G++P ++    L++   E G  ++A EL  +M   GLL  +
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPST 352


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  126 bits (316), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 128/244 (52%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I GLC E++   +  +   + E     + V    L+++  KAG+ ++A+ L 
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            ++ DS+I     T+  +IDG CK+G++  A     +M    L P+V  Y  L+  LCK+
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +++A  LF+EM + +  PD  ++  +IDG LK    K A +L   M+  G+  DL  Y
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + L+    + G+L EA   F +M+  G  PD  +C S+LK    +G  D+  EL  +++ 
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662

Query: 249 RGLL 252
           + ++
Sbjct: 663 KDIV 666



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 119/237 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++ GLC   +   +  LL EM+ N L  +     T++  + +  E  +AL L +EM 
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S    ++VT+ +LID  CK+G + EA+ +   M   GL  ++ VYT+LI G C    ++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           R + LFDE+ +R   P    Y  LI G+ K    KEA  +   M E GV  ++  YT L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            GL   G  +EA    + MI +   P+ +    ++ K  + G + +A+E+   M  R
Sbjct: 325 DGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 115/242 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  ++  D+  Y T+I G C   + E +  L +EMK +G + + V    L+DA+ KAG+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+  L EM    +E  +V +  LI G C  G +      F  + + G  P    Y  
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++ A  +F+ M +R + P+   YT LIDG       KEAL   N M E  
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKD 347

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + +   Y  ++  L + G + +A  +   M  R   PD I    LL     +G++DEA 
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 241 EL 242
           +L
Sbjct: 408 KL 409



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 101/212 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG      L  +G +I   C   K +++   L EMK  GL A+ V+ T+L+  +   GE
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +L DE+L+       +T+  LI G CK G ++EA + F  M + G+ PNV  YT 
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC     + A    + M ++D  P+   Y  +I+   K     +A+ +   M +  
Sbjct: 323 LIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
              D   Y  L+ GL   G L EA  L + M+
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLML 414



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 99/217 (45%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +M E     N V  + L++ Y +  +   A  +L  ML       V    +L+ GLC++ 
Sbjct: 97  KMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNL 156

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
              +A+     M    L P+V  Y  +I G C+   +E+A  L +EM           + 
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LID + K     EA+     M  +G++ DL  YTSL+ G   CG L   + LF E++ R
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  P  I   +L++   + G + EA E+   M+ RG+
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 37/271 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + +++  +   M E G+  N    T L+D     G+  EAL  L+ M+
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMI 344

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF--------GL------- 111
           +   E   VT+ ++I+ LCK GLV +A++    M      PD         GL       
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404

Query: 112 ----------------HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
                            P+V  Y ALI GLCK+N + +A +++D + ++    D      
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L++  LK     +A+ L  ++++  +  + + YT+++ G  + G L  A+ L  +M    
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           + P       LL    + G++D+A  L  EM
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 93/216 (43%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+ M + G   N      L+    +  E  +A+SLL EM  + +   V ++  +I G C
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           +   + +A++    M   G   ++  +  LID  CK   ++ A     EM    +  D  
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT+LI G+           L + + E G       Y +L+ G  + G L+EA  +F  M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           I RG+ P+      L+      G   EA++  N M+
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMI 344



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 1/212 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  ++ ++ +  N+   T ++D + K G  + A  LL +M  S ++ +V  +  L+  LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G + +A   F  M      P+V  +  +IDG  K   I+ A +L   M +  + PD  
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ LI+ +LK     EA++  ++M + G + D +   S++      G   +   L  ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660

Query: 212 IGRGILPD-EILCISLLKKHYERGNMDEAIEL 242
           + + I+ D E+ C  +        NMD A  L
Sbjct: 661 VDKDIVLDKELTCTVMDYMCNSSANMDLAKRL 692



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 3/170 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC E   + +  L  EM+ +    + V    ++D   KAG+   A SLL  M 
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + +   + T+  LI+   K G + EAI +F +M D G  P+  +  +++     +   +
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +   L  ++  +D++ D      ++D Y+ + S    ++L  R+  V  D
Sbjct: 652 KLTELVKKLVDKDIVLDKELTCTVMD-YMCNSS--ANMDLAKRLLRVTDD 698



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 1/155 (0%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           ++ A+  F +  D G     A  + L+  L +    E A + + +M + D   +  + + 
Sbjct: 54  LKNAVSVFQQAVDSGSSLAFA-GSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSG 112

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L++ Y++      A  +   M + G   ++  +  L+ GL R     +A  L  EM    
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++PD     ++++   E   +++A+EL NEM G G
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 5/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+GK I  D+  YG +I G       + +  +  EM E GLT N +I   L+  + ++GE
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LLDEM    +    VT+C +IDG CKSG + EA   F  M   GL P+  VYT 
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C+ N +ERA  +F    K+     T  + ALI+   K    +    + NR+ +  
Sbjct: 738 LVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796

Query: 181 VDL----DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            D     +   Y  ++  L + G+L+ A+ LFH+M    ++P  I   SLL  + + G  
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856

Query: 237 DEAIELQNEMMGRGL 251
            E   + +E +  G+
Sbjct: 857 AEMFPVFDEAIAAGI 871



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 132/255 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  D+  Y ++I GL    + ++++  L EM ENGL  N       +  Y +A E
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A   + EM +  +    V    LI+  CK   V EA   +  M D G+  +   YT 
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GL K + ++ A  +F EM  + + PD  +Y  LI+G+ K  + ++A ++ + M E G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y  L+ G  R G +++A+ L  EM  +G+ P+ +   +++  + + G++ EA 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 241 ELQNEMMGRGLLSGS 255
            L +EM  +GL+  S
Sbjct: 718 RLFDEMKLKGLVPDS 732



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +NI      YGT++ G+C     + +  ++ EM  +G   N VI TTL+  + +   
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +L EM +  I   +  +  LI GL K+  + EA  +   M + GL PN   Y A
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  + +    A     EM +  ++P+    T LI+ Y K E   EA +    M + G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQG 587

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT L+ GL +   + +A  +F EM G+GI PD      L+    + GNM +A 
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 241 ELQNEMMGRGL 251
            + +EM+  GL
Sbjct: 648 SIFDEMVEEGL 658



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 123/237 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +   YG  I G    S+F  +   + EM+E G+  N V+CT L++ Y K  +  EA 
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEAC 577

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S    M+D  I     T+ VL++GL K+  V +A + F  M   G+ P+V  Y  LI+G 
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +++A ++FDEM +  + P+   Y  L+ G+ +    ++A  L + M+  G+  + 
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             Y +++ G  + G L EA  LF EM  +G++PD  +  +L+       +++ AI +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + ++ +Y T+I      S+F D+  +L EMKE G+  +     +L+    KA  
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S L EM+++ ++    T+   I G  ++     A  Y   M + G+ PN  + T 
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  CKK  +  A + +  M  + ++ D   YT L++G  K++   +A  +   M   G
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ +Y  L+ G S+ G++Q+A  +F EM+  G+ P+ I+   LL      G +++A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 241 ELQNEMMGRGL 251
           EL +EM  +GL
Sbjct: 683 ELLDEMSVKGL 693



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 120/284 (42%), Gaps = 38/284 (13%)

Query: 7   KADLPL---YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  +PL   Y  +I GLC   + ED+K LL EM   G++ +    + L+D   K      
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L+ EM+   I +    +   I  + K G++ +A   F  M   GL P    Y +LI+
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390

Query: 124 GLCKKNCIERARNLFDEMPKRDMI-----------------------------------P 148
           G C++  + +   L  EM KR+++                                   P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   YT LI  +L++  F +A+ +   M E G+  D+  Y SL+ GLS+   + EAR   
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            EM+  G+ P+     + +  + E      A +   EM   G+L
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL 554



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 2/254 (0%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G NIK    +Y   I  +  E   E +K L   M  +GL        +L++ Y +     
Sbjct: 342 GINIKP--YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +   LL EM    I ++  T+  ++ G+C SG +  A +    M   G  PNV +YT LI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
               + +    A  +  EM ++ + PD   Y +LI G  K +   EA +    M E G+ 
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +   Y + + G         A     EM   G+LP+++LC  L+ ++ ++  + EA   
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSA 579

Query: 243 QNEMMGRGLLSGSK 256
              M+ +G+L  +K
Sbjct: 580 YRSMVDQGILGDAK 593



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 10/238 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +  D  +Y T++ G C  +  E +  +    K+ G  ++T     L++  FK G+
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGK 781

Query: 61  PSEALSLLDEMLDSRIE----VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
                 +L+ ++D   +       VT+ ++ID LCK G +  A + F +M +  L P V 
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            YT+L++G  K         +FDE     + PD   Y+ +I+ +LK     +AL L ++M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901

Query: 177 -----TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
                 + G  L ++   +L+ G ++ G ++ A  +   M+    +PD    I L+ +
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINE 959



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 21/265 (7%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  L+G +  G   +   E++  + S      L      C  L+DA  +         + 
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY-FGRMPDF------------------ 109
             M++  +   V T+ +LI   C++G V+   D  F    +F                  
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 110 --GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             GL P    Y  LIDGLCK   +E A++L  EM    +  D   Y+ LIDG LK  +  
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A  L + M   G+++    Y   +  +S+ G +++A+ LF  MI  G++P      SL+
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
           + +    N+ +  EL  EM  R ++
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIV 414



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 35/223 (15%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L + M+   +     T+ VLIDGLCK   + +A      M   G+  +   Y+ LID
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 124 GL-----------------------------------CKKNCIERARNLFDEMPKRDMIP 148
           GL                                    K+  +E+A+ LFD M    +IP
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
              AY +LI+GY + ++ ++   L   M +  + +    Y ++V G+   G L  A  + 
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EMI  G  P+ ++  +L+K   +     +A+ +  EM  +G+
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 5/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+GK I  D+  YG +I G       + +  +  EM E GLT N +I   L+  + ++GE
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LLDEM    +    VT+C +IDG CKSG + EA   F  M   GL P+  VYT 
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C+ N +ERA  +F    K+     T  + ALI+   K    +    + NR+ +  
Sbjct: 738 LVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796

Query: 181 VDL----DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            D     +   Y  ++  L + G+L+ A+ LFH+M    ++P  I   SLL  + + G  
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856

Query: 237 DEAIELQNEMMGRGL 251
            E   + +E +  G+
Sbjct: 857 AEMFPVFDEAIAAGI 871



 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 133/255 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  D+  Y ++I GL    + ++++  L EM ENGL  N       +  Y +A E
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A   + EM +  +    V    LI+  CK G V EA   +  M D G+  +   YT 
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GL K + ++ A  +F EM  + + PD  +Y  LI+G+ K  + ++A ++ + M E G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y  L+ G  R G +++A+ L  EM  +G+ P+ +   +++  + + G++ EA 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 241 ELQNEMMGRGLLSGS 255
            L +EM  +GL+  S
Sbjct: 718 RLFDEMKLKGLVPDS 732



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 124/237 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +   YG  I G    S+F  +   + EM+E G+  N V+CT L++ Y K G+  EA 
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S    M+D  I     T+ VL++GL K+  V +A + F  M   G+ P+V  Y  LI+G 
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +++A ++FDEM +  + P+   Y  L+ G+ +    ++A  L + M+  G+  + 
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             Y +++ G  + G L EA  LF EM  +G++PD  +  +L+       +++ AI +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +NI      YGT++ G+C     + +  ++ EM  +G   N VI TTL+  + +   
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +L EM +  I   +  +  LI GL K+  + EA  +   M + GL PN   Y A
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  + +    A     EM +  ++P+    T LI+ Y K     EA +    M + G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT L+ GL +   + +A  +F EM G+GI PD      L+    + GNM +A 
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 241 ELQNEMMGRGL 251
            + +EM+  GL
Sbjct: 648 SIFDEMVEEGL 658



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + ++ +Y T+I      S+F D+  +L EMKE G+  +     +L+    KA  
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S L EM+++ ++    T+   I G  ++     A  Y   M + G+ PN  + T 
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  CKK  +  A + +  M  + ++ D   YT L++G  K++   +A  +   M   G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ +Y  L+ G S+ G++Q+A  +F EM+  G+ P+ I+   LL      G +++A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 241 ELQNEMMGRGL 251
           EL +EM  +GL
Sbjct: 683 ELLDEMSVKGL 693



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 132/323 (40%), Gaps = 73/323 (22%)

Query: 7   KADLPL---YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  +PL   Y  +I GLC   + ED+K LL EM   G++ +    + L+D   K      
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L+ EM+   I +    +   I  + K G++ +A   F  M   GL P    Y +LI+
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390

Query: 124 GLCKKNCIERARNLFDEMPKRDMI-----------------------------------P 148
           G C++  + +   L  EM KR+++                                   P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   YT LI  +L++  F +A+ +   M E G+  D+  Y SL+ GLS+   + EAR   
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510

Query: 209 HEMIGR-----------------------------------GILPDEILCISLLKKHYER 233
            EM+                                     G+LP+++LC  L+ ++ ++
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570

Query: 234 GNMDEAIELQNEMMGRGLLSGSK 256
           G + EA      M+ +G+L  +K
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAK 593



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 110/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C E        LL EMK+  +  +     T++     +G+   A +++ EM+
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S     VV +  LI    ++    +A+     M + G+ P++  Y +LI GL K   ++
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR+   EM +  + P+   Y A I GY++   F  A      M E GV  +    T L+
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               + G + EA   +  M+ +GIL D      L+   ++   +D+A E+  EM G+G+
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 10/238 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +  D  +Y T++ G C  +  E +  +    K+ G  ++T     L++  FK G+
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGK 781

Query: 61  PSEALSLLDEMLDSRIE----VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
                 +L+ ++D   +       VT+ ++ID LCK G +  A + F +M +  L P V 
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            YT+L++G  K         +FDE     + PD   Y+ +I+ +LK     +AL L ++M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901

Query: 177 -----TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
                 + G  L ++   +L+ G ++ G ++ A  +   M+    +PD    I L+ +
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINE 959



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 21/265 (7%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  L+G +  G   +   E++  + S      L      C  L+DA  +         + 
Sbjct: 150 DGVLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY-FGRMPDF------------------ 109
             M++  +   V T+ +LI   C++G V+   D  F    +F                  
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 110 --GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             GL P    Y  LIDGLCK   +E A++L  EM    +  D   Y+ LIDG LK  +  
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A  L + M   G+++    Y   +  +S+ G +++A+ LF  MI  G++P      SL+
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
           + +    N+ +  EL  EM  R ++
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIV 414



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 35/223 (15%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L + M+   +     T+ VLIDGLCK   + +A      M   G+  +   Y+ LID
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 124 GL-----------------------------------CKKNCIERARNLFDEMPKRDMIP 148
           GL                                    K+  +E+A+ LFD M    +IP
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
              AY +LI+GY + ++ ++   L   M +  + +    Y ++V G+   G L  A  + 
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EMI  G  P+ ++  +L+K   +     +A+ +  EM  +G+
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 127/244 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+  +  Y T++ GLC    ++D+  L   M + G+T N V   TL+D  FK G+ S 
Sbjct: 271 KGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSR 330

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL+L D++L   I  ++  F  +I+GLCK G +  A + F RM + G  P+   Y  L D
Sbjct: 331 ALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSD 390

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +E A  + ++M K ++ P    Y +LI G    +   + ++L   M   G+  
Sbjct: 391 GYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSP 450

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y +L+ G    G L +A   + EMIG+G  P+ I+C  ++   Y  G +DEA  L 
Sbjct: 451 NVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLL 510

Query: 244 NEMM 247
            +M+
Sbjct: 511 QKMV 514



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM- 71
           Y +++ G       E +K +L  M E G+  N V  T L+  Y K  +  EA  +L EM 
Sbjct: 104 YNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREME 163

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +  + V    +  LIDG CK G + +AI     M   GL  N+ V  +LI+G CK   +
Sbjct: 164 KEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQV 223

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
                L   M K D+ PD+ +Y  L+DGY +     +A N+ ++M   G++  +  Y +L
Sbjct: 224 HEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTL 283

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL R G  ++A  L+H M+ RG+ P+E+   +LL   ++ G+   A+ L ++++ RG+
Sbjct: 284 LKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGI 343



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 116/239 (48%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K   +  D   YG +I G C   K  D+  +  EM + GL  N  +C +L++ Y K G+ 
Sbjct: 164 KEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQV 223

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            E   LL  M    ++    ++C L+DG C+ GL  +A +   +M   G+ P V  Y  L
Sbjct: 224 HEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTL 283

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           + GLC+    + A  L+  M +R + P+   Y  L+DG  K   F  AL L + +   G+
Sbjct: 284 LKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGI 343

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  + A+ +++ GL + G +  A+  F  M   G  PD I   +L   + + GN++EA 
Sbjct: 344 NKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAF 402



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 6   IKADLP---LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           IK  LP   +Y   + GLC   K  D++     +     T +     TL+  +  AG  +
Sbjct: 550 IKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVN 609

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA +L DEM++  +   + T+  L++GLCKSG +  A   F ++   GL PNV  Y  LI
Sbjct: 610 EAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILI 669

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG CK      A +L  +M K  + P    Y++LI+G+ K    +EA+ L N M    VD
Sbjct: 670 DGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVD 729

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             +  ++ LV G  + G +++   L + M
Sbjct: 730 QTIATFSKLVEGCIQHGDVKKMSKLHNMM 758



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 70/316 (22%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  YG +I G C + + + +     EM   G   N +IC+ ++ + ++ G 
Sbjct: 443 MDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGR 502

Query: 61  PSEALSLLDEMLD--------------------------------SRIEVTV---VTFCV 85
             EA  LL +M+D                                S I+ ++   V + +
Sbjct: 503 IDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNI 562

Query: 86  LIDGLCKSGLVREAIDYF-----------------------------------GRMPDFG 110
            + GLCKSG V +A  +F                                     M + G
Sbjct: 563 AMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKG 622

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           L PN+  Y AL++GLCK   ++RAR LFD++  + +IP+   Y  LIDGY K  S +EAL
Sbjct: 623 LVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREAL 682

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           +L+ +M + G+   +  Y+SL+ G  +   ++EA  L +EM    +         L++  
Sbjct: 683 DLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGC 742

Query: 231 YERGNMDEAIELQNEM 246
            + G++ +  +L N M
Sbjct: 743 IQHGDVKKMSKLHNMM 758



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 127/281 (45%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +L +  ++I G C   +  + + LL  M++  L  ++    TL+D Y + G  S+A 
Sbjct: 203 LKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAF 262

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           ++ D+ML   IE TVVT+  L+ GLC+ G  ++A+  +  M   G+ PN   Y  L+DGL
Sbjct: 263 NVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGL 322

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K     RA  L+D++  R +     A+  +I+G  K      A     RM E+G   D 
Sbjct: 323 FKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDG 382

Query: 186 NAYTSLVWGLSRCGHLQEARV-----------------------------------LFHE 210
             Y +L  G  + G+++EA                                     L  E
Sbjct: 383 ITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAE 442

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  RG+ P+ +   +L+    ++G +D+A     EM+G+G 
Sbjct: 443 MDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGF 483



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 1/222 (0%)

Query: 31  LLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           L+  +M+   +  +   C  +++AY KAG+   A+  + EM     E+  V++  L+DG 
Sbjct: 52  LVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGY 111

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD-MIPD 149
              G +  A      M + G+  N    T LI G CK+  +E A  +  EM K D ++ D
Sbjct: 112 VSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVD 171

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
             AY ALIDGY K     +A+ +++ M +VG+ ++L    SL+ G  + G + E   L  
Sbjct: 172 EYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLM 231

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            M    + PD     +L+  +   G   +A  + ++M+ +G+
Sbjct: 232 CMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGI 273



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 116/285 (40%), Gaps = 35/285 (12%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            + I   +  + T+I GLC   + + +K     M+E G   + +   TL D Y K G   
Sbjct: 340 ARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVE 399

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA  + ++M    I  ++  +  LI GL  S  + + ID    M   GL PNV  Y ALI
Sbjct: 400 EAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALI 459

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C +  +++A + + EM  +   P+    + ++    +     EA  L  +M +  + 
Sbjct: 460 AGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLV 519

Query: 183 LD-------LNA----------------------------YTSLVWGLSRCGHLQEARVL 207
           LD        NA                            Y   + GL + G + +AR  
Sbjct: 520 LDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRF 579

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           F  +      PD     +L+      G ++EA  L++EM+ +GL+
Sbjct: 580 FLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLV 624



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 81/155 (52%)

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G+V+ A+  F  M  +G  P++    +L+  L K+     A  ++D+M + D++PD  
Sbjct: 8   EKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVF 67

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
               +++ Y K    + A+     M ++G +L+  +Y SLV G    G ++ A+ +   M
Sbjct: 68  TCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFM 127

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             +G++ +++    L+K + ++  ++EA ++  EM
Sbjct: 128 SEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREM 162



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 102/243 (41%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           + +Y ++I GL    K      LL+EM   GL+ N V    L+  +   G   +A S   
Sbjct: 417 IEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYF 476

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM+       V+    ++  L + G + EA     +M DF L  +        +   +K 
Sbjct: 477 EMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKL 536

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
              +  +  DE   +  +P+   Y   + G  K     +A      ++      D   Y 
Sbjct: 537 DCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYC 596

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +L+ G S  G++ EA  L  EM+ +G++P+     +LL    + G +D A  L +++  +
Sbjct: 597 TLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLK 656

Query: 250 GLL 252
           GL+
Sbjct: 657 GLI 659


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 128/244 (52%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I GLC E++   +  +   + E     + V    L+++  KAG+ ++A+ L 
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            ++ DS+I     T+  +IDG CK+G++  A     +M    L P+V  Y  L+  LCK+
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +++A  LF+EM + +  PD  ++  +IDG LK    K A +L   M+  G+  DL  Y
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + L+    + G+L EA   F +M+  G  PD  +C S+LK    +G  D+  EL  +++ 
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662

Query: 249 RGLL 252
           + ++
Sbjct: 663 KDIV 666



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 120/237 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++ GLC   +   +  LL EM+ N L  +     T++  + +  E  +AL L +EM 
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S    ++VT+ +LID  CK+G + EA+ +   M   GL  ++ VYT+LI G C    ++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           R + LFDE+ +R   P    Y  LI G+ K    KEA  +   M E GV  ++  YT L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            GL   G  +EA  L + MI +   P+ +    ++ K  + G + +A+E+   M  R
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 116/242 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  ++  D+  Y T+I G C   + E +  L +EMK +G + + V    L+DA+ KAG+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+  L EM    +E  +V +  LI G C  G +      F  + + G  P    Y  
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++ A  +F+ M +R + P+   YT LIDG       KEAL L N M E  
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + +   Y  ++  L + G + +A  +   M  R   PD I    LL     +G++DEA 
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407

Query: 241 EL 242
           +L
Sbjct: 408 KL 409



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 102/212 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG      L  +G +I   C   K +++   L EMK  GL A+ V+ T+L+  +   GE
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +L DE+L+       +T+  LI G CK G ++EA + F  M + G+ PNV  YT 
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC     + A  L + M ++D  P+   Y  +I+   K     +A+ +   M +  
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
              D   Y  L+ GL   G L EA  L + M+
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLML 414



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 99/217 (45%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +M E     N V  + L++ Y +  +   A  +L  ML       V    +L+ GLC++ 
Sbjct: 97  KMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNL 156

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
              +A+     M    L P+V  Y  +I G C+   +E+A  L +EM           + 
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LID + K     EA+     M  +G++ DL  YTSL+ G   CG L   + LF E++ R
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  P  I   +L++   + G + EA E+   M+ RG+
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 37/271 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + +++  +   M E G+  N    T L+D     G+  EAL LL+ M+
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF--------GL------- 111
           +   E   VT+ ++I+ LCK GLV +A++    M      PD         GL       
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404

Query: 112 ----------------HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
                            P+V  Y ALI GLCK+N + +A +++D + ++    D      
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L++  LK     +A+ L  ++++  +  + + YT+++ G  + G L  A+ L  +M    
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           + P       LL    + G++D+A  L  EM
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 94/216 (43%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+ M + G   N      L+    +  E  +A+SLL EM  + +   V ++  +I G C
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           +   + +A++    M   G   ++  +  LID  CK   ++ A     EM    +  D  
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT+LI G+           L + + E G       Y +L+ G  + G L+EA  +F  M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           I RG+ P+      L+      G   EA++L N M+
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 1/212 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  ++ ++ +  N+   T ++D + K G  + A  LL +M  S ++ +V  +  L+  LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G + +A   F  M      P+V  +  +IDG  K   I+ A +L   M +  + PD  
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ LI+ +LK     EA++  ++M + G + D +   S++      G   +   L  ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660

Query: 212 IGRGILPD-EILCISLLKKHYERGNMDEAIEL 242
           + + I+ D E+ C  +        NMD A  L
Sbjct: 661 VDKDIVLDKELTCTVMDYMCNSSANMDLAKRL 692



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 3/170 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC E   + +  L  EM+ +    + V    ++D   KAG+   A SLL  M 
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + +   + T+  LI+   K G + EAI +F +M D G  P+  +  +++     +   +
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +   L  ++  +D++ D      ++D Y+ + S    ++L  R+  V  D
Sbjct: 652 KLTELVKKLVDKDIVLDKELTCTVMD-YMCNSS--ANMDLAKRLLRVTDD 698



 Score = 40.0 bits (92), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 1/155 (0%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           ++ A+  F +  D G     A    L+  L +    E A + + +M + D   +  + + 
Sbjct: 54  LKNAVSVFQQAVDSGSSLAFA-GNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSG 112

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L++ Y++      A  +   M + G   ++  +  L+ GL R     +A  L  EM    
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++PD     ++++   E   +++A+EL NEM G G
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 126/250 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +      Y  +I GLC +     +  L  EM  NG++ N    TTL+  + K G 
Sbjct: 431 MVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGN 490

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D+M+DS +    VTF V+I+G C+ G VR+A   + +M D GL P+   Y +
Sbjct: 491 MDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRS 550

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC      +A+   D++    ++ ++ + T L+ G+ K     E  ++ + M   G
Sbjct: 551 LISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARG 610

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V LDL ++T +V+   +    ++  VLF EM  +G+ PD +    ++  H +  N+ +A+
Sbjct: 611 VKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQAL 670

Query: 241 ELQNEMMGRG 250
              ++M+  G
Sbjct: 671 NCWDKMIADG 680



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 116/220 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L   + E G+  N   C  L+D   K     EA  L   M +  +E   VT+ +LI  LC
Sbjct: 322 LACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLC 381

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G++ +A+  F RM + G+   V  Y +LI+G C+ +   +AR L +EM ++ + P   
Sbjct: 382 KRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAA 441

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +Y+ LI G  +      A+ L   M   GV  ++  +T+L+ G  + G++ EA  LF +M
Sbjct: 442 SYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKM 501

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I   ++P+E+    +++ +   GN+ +A +L ++M+ RGL
Sbjct: 502 IDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGL 541



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K     Y  +++GLC  ++  ++  + + M E G+ A+ V   TL+  + +  E
Sbjct: 221 MESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEE 280

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL + D+ML      +V +   ++DGL K G + +A      + + G+ PN+    A
Sbjct: 281 LEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNA 340

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK      A  LF  M  R + P+   Y  LI    K     +AL + +RM E G
Sbjct: 341 LIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKG 400

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + + +  Y SL+ G  +  +  +AR L +EM+ +G+ P       L+     +G++  A+
Sbjct: 401 IRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAM 460

Query: 241 ELQNEMMGRGL 251
           EL  EM   G+
Sbjct: 461 ELHREMARNGV 471



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 8/220 (3%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            +I  LC + +F +++ L   M   GL  N V    L+ +  K G   +AL + D M + 
Sbjct: 340 ALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREK 399

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            I VTV  +  LI+G C+     +A      M + GL P+ A Y+ LI GLC+K  +  A
Sbjct: 400 GIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASA 459

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L  EM +  +  +   +T LI G+ K  +  EA  L ++M +  V  +   +  ++ G
Sbjct: 460 MELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEG 519

Query: 195 LSRCGHLQEARVLFHEMIGRGILPD--------EILCISL 226
             R G++++A  L+ +M+ RG+ PD         +LC++L
Sbjct: 520 YCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTL 559



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ +   Y  +I  LC     +D+  +   M+E G+        +L++ Y +   
Sbjct: 361 MANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDN 420

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL+EM++  +  +  ++  LI GLC+ G +  A++    M   G+  NV  +T 
Sbjct: 421 FHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTT 480

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++ A  LFD+M    ++P+   +  +I+GY +  + ++A  L ++M + G
Sbjct: 481 LISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRG 540

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y SL+  L       +A+    ++    ++ +     +L+    + G + E  
Sbjct: 541 LTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETY 600

Query: 241 ELQNEMMGRGL 251
            + +EM  RG+
Sbjct: 601 HIWDEMRARGV 611



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +K DL  +  I++        E   +L  EMKE G+  + V  T ++D + K   
Sbjct: 606 MRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEEN 665

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+  D+M+       VVT+ VLI+ LCKSG +  A      M      PN   Y  
Sbjct: 666 IVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNC 725

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +D L  +  +E+A+ L   + +   + +T  +  LI G+ K    + A++L    TE G
Sbjct: 726 FLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESG 784

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D  +Y++++  L + G + +A  L++EM+ +G+ PD +    L++     G  D+ +
Sbjct: 785 FFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGL 844

Query: 241 ELQNEMM 247
            + ++M+
Sbjct: 845 GIYSDMV 851



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 113/236 (47%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I++ L    +F  ++ L  EM +     +  + T  + AY +      A  LL  M    
Sbjct: 166 ILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKG 225

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++ + V + VL+ GLC++  V EA++    M + G+  +   Y  L+ G C+   +E A 
Sbjct: 226 VKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMAL 285

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            + D+M     +P   + + ++DG  K     +A  L   + E+G+  +L A  +L+  L
Sbjct: 286 EMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKL 345

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +    +EA  LF  M  RG+ P+E+    L+    +RG MD+A+ + + M  +G+
Sbjct: 346 CKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGI 401



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 114/237 (48%), Gaps = 1/237 (0%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T+++G C E +  ++  +  EM+  G+  + +  T ++ A  K  +  +   L  EM + 
Sbjct: 585 TLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEK 644

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            ++   V    +ID   K   + +A++ + +M   G  PNV  YT LI+ LCK   +  A
Sbjct: 645 GVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSA 704

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
           + L +EM     +P++  Y   +D +L +E   E   + +     G   +   + +L+ G
Sbjct: 705 QILCEEMLVGRFLPNSFTYNCFLD-FLANEGELEKAKVLHATILEGCLANTVTFNTLIKG 763

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             + G +Q A  L       G  PD I   +++ +  + G++++A +L NEM+ +GL
Sbjct: 764 FCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGL 820



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 122/282 (43%), Gaps = 35/282 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  + T+I G C +   +++  L  +M ++ +  N V    +++ Y + G 
Sbjct: 466 MARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGN 525

Query: 61  PSEALSLLDEMLD-----------SRIEVTVVTF---------------CVLID------ 88
             +A  L D+M+D           S I V  +T                CV+++      
Sbjct: 526 VRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTT 585

Query: 89  ---GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
              G CK G + E    +  M   G+  ++  +T ++    K +  E+   LF EM ++ 
Sbjct: 586 LMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKG 645

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   +T +ID + K E+  +ALN  ++M   G   ++  YT L+  L + G+L  A+
Sbjct: 646 VKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQ 705

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +L  EM+    LP+       L      G +++A  L   ++
Sbjct: 706 ILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL 747



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 1/167 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC       +++L  EM       N+      +D     GE  +A  L   +L
Sbjct: 688 YTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL 747

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +  TV TF  LI G CK+G ++ AID      + G  P+   Y+ +I+ LCK   I 
Sbjct: 748 EGCLANTV-TFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDIN 806

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +A  L++EM  + + PD  AY  LI     H  F + L + + M  +
Sbjct: 807 KAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNL 853



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 81/189 (42%)

Query: 54  AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
           +Y +     +A  +L   L S I +   T   ++  L K      A D F  M       
Sbjct: 134 SYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPL 193

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           +  VYTA I   C+   ++ AR L   M  + +      Y  L+ G  ++    EA+ +K
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVK 253

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
           N M E G+  D   Y +LV+G  R   L+ A  +  +M+    +P    C  ++    +R
Sbjct: 254 NSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKR 313

Query: 234 GNMDEAIEL 242
           G++D+A  L
Sbjct: 314 GHIDKAFRL 322



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 2/132 (1%)

Query: 118 YTA--LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
           YTA  ++  L K      AR+LFDEM +     D   YTA I  Y +  +   A  L  R
Sbjct: 161 YTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTR 220

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           M   GV      Y  L++GL R   + EA  + + M+ RGI+ DE+   +L+        
Sbjct: 221 MESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEE 280

Query: 236 MDEAIELQNEMM 247
           ++ A+E+ ++M+
Sbjct: 281 LEMALEMTDDML 292


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 5/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+GK I  D+  YG +I G       + +  +  EM E GLT N +I   L+  + ++GE
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LLDEM    +    VT+C +IDG CKSG + EA   F  M   GL P+  VYT 
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C+ N +ERA  +F    K+     T  + ALI+   K    +    + NR+ +  
Sbjct: 738 LVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796

Query: 181 VDL----DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            D     +   Y  ++  L + G+L+ A+ LFH+M    ++P  I   SLL  + + G  
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856

Query: 237 DEAIELQNEMMGRGL 251
            E   + +E +  G+
Sbjct: 857 AEMFPVFDEAIAAGI 871



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 133/255 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  D+  Y ++I GL    + ++++  L EM ENGL  N       +  Y +A E
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A   + EM +  +    V    LI+  CK G V EA   +  M D G+  +   YT 
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GL K + ++ A  +F EM  + + PD  +Y  LI+G+ K  + ++A ++ + M E G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y  L+ G  R G +++A+ L  EM  +G+ P+ +   +++  + + G++ EA 
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717

Query: 241 ELQNEMMGRGLLSGS 255
            L +EM  +GL+  S
Sbjct: 718 RLFDEMKLKGLVPDS 732



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 124/237 (52%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +   YG  I G    S+F  +   + EM+E G+  N V+CT L++ Y K G+  EA 
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S    M+D  I     T+ VL++GL K+  V +A + F  M   G+ P+V  Y  LI+G 
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +++A ++FDEM +  + P+   Y  L+ G+ +    ++A  L + M+  G+  + 
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             Y +++ G  + G L EA  LF EM  +G++PD  +  +L+       +++ AI +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +NI      YGT++ G+C     + +  ++ EM  +G   N VI TTL+  + +   
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +L EM +  I   +  +  LI GL K+  + EA  +   M + GL PN   Y A
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G  + +    A     EM +  ++P+    T LI+ Y K     EA +    M + G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT L+ GL +   + +A  +F EM G+GI PD      L+    + GNM +A 
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 241 ELQNEMMGRGL 251
            + +EM+  GL
Sbjct: 648 SIFDEMVEEGL 658



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + ++ +Y T+I      S+F D+  +L EMKE G+  +     +L+    KA  
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S L EM+++ ++    T+   I G  ++     A  Y   M + G+ PN  + T 
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  CKK  +  A + +  M  + ++ D   YT L++G  K++   +A  +   M   G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ +Y  L+ G S+ G++Q+A  +F EM+  G+ P+ I+   LL      G +++A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 241 ELQNEMMGRGL 251
           EL +EM  +GL
Sbjct: 683 ELLDEMSVKGL 693



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 132/323 (40%), Gaps = 73/323 (22%)

Query: 7   KADLPL---YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  +PL   Y  +I GLC   + ED+K LL EM   G++ +    + L+D   K      
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L+ EM+   I +    +   I  + K G++ +A   F  M   GL P    Y +LI+
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390

Query: 124 GLCKKNCIERARNLFDEMPKRDMI-----------------------------------P 148
           G C++  + +   L  EM KR+++                                   P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   YT LI  +L++  F +A+ +   M E G+  D+  Y SL+ GLS+   + EAR   
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510

Query: 209 HEMIGR-----------------------------------GILPDEILCISLLKKHYER 233
            EM+                                     G+LP+++LC  L+ ++ ++
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570

Query: 234 GNMDEAIELQNEMMGRGLLSGSK 256
           G + EA      M+ +G+L  +K
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAK 593



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 110/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C E        LL EMK+  +  +     T++     +G+   A +++ EM+
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S     VV +  LI    ++    +A+     M + G+ P++  Y +LI GL K   ++
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR+   EM +  + P+   Y A I GY++   F  A      M E GV  +    T L+
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               + G + EA   +  M+ +GIL D      L+   ++   +D+A E+  EM G+G+
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 10/238 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +  D  +Y T++ G C  +  E +  +    K+ G  ++T     L++  FK G+
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGK 781

Query: 61  PSEALSLLDEMLDSRIE----VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
                 +L+ ++D   +       VT+ ++ID LCK G +  A + F +M +  L P V 
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            YT+L++G  K         +FDE     + PD   Y+ +I+ +LK     +AL L ++M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901

Query: 177 -----TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
                 + G  L ++   +L+ G ++ G ++ A  +   M+    +PD    I L+ +
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINE 959



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 21/265 (7%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  L+G +  G   +   E++  + S      L      C  L+DA  +         + 
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY-FGRMPDF------------------ 109
             M++  +   V T+ +LI   C++G V+   D  F    +F                  
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269

Query: 110 --GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             GL P    Y  LIDGLCK   +E A++L  EM    +  D   Y+ LIDG LK  +  
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A  L + M   G+++    Y   +  +S+ G +++A+ LF  MI  G++P      SL+
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
           + +    N+ +  EL  EM  R ++
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIV 414



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 35/223 (15%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L + M+   +     T+ VLIDGLCK   + +A      M   G+  +   Y+ LID
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320

Query: 124 GL-----------------------------------CKKNCIERARNLFDEMPKRDMIP 148
           GL                                    K+  +E+A+ LFD M    +IP
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
              AY +LI+GY + ++ ++   L   M +  + +    Y ++V G+   G L  A  + 
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EMI  G  P+ ++  +L+K   +     +A+ +  EM  +G+
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483


>gi|224576613|gb|ACN56980.1| At1g03560-like protein [Capsella rubella]
          Length = 196

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 104/195 (53%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      GL  N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALTKHXKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 81/179 (45%), Gaps = 1/179 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        + + +  + +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            L K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + G+
Sbjct: 136 ALTKHXKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGI 194



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 1/149 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++         NGL  N++  ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K   V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHXKVDEAMXLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            LI G+ K +  E A  L+D M  + + P
Sbjct: 168 ILISGMFKDHRNEEALKLWDMMIDKGITP 196


>gi|260780558|gb|ACX50825.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 176

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 94/175 (53%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+     +  +I GLC E K  +   +   M   G   N  I T L+D Y K+G   +
Sbjct: 1   KGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVED 60

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ LL  M+D   +  VVTF V+++GLCK+G V EA+DYF      GL  N   Y++LID
Sbjct: 61  AIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLID 120

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           GL K   I+ A  LF+EM ++    D+  Y ALID + KH    EA+ L  RM E
Sbjct: 121 GLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 175



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 84/171 (49%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  K   +E A 
Sbjct: 3   IQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAI 62

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L   M      PD   ++ +++G  K+   +EAL+        G+ ++   Y+SL+ GL
Sbjct: 63  RLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGL 122

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + G + EA  LF EM  +G   D     +L+    + G +DEA+ L   M
Sbjct: 123 GKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 78/155 (50%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           K G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V 
Sbjct: 19  KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVV 78

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            ++ +++GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M
Sbjct: 79  TFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 138

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +E G   D   Y +L+   ++ G + EA  LF  M
Sbjct: 139 SEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 72/141 (51%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+      ++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K  + ++A
Sbjct: 2   GIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDA 61

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           + L +RM + G   D+  ++ +V GL + G ++EA   F      G+  + +   SL+  
Sbjct: 62  IRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDG 121

Query: 230 HYERGNMDEAIELQNEMMGRG 250
             + G +DEA  L  EM  +G
Sbjct: 122 LGKAGRIDEAERLFEEMSEKG 142



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 51/108 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  +  ++ GLC   + E++       + NGL  N++  ++L+D   KAG 
Sbjct: 68  MIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGR 127

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
             EA  L +EM +         +  LID   K G V EA+  F RM +
Sbjct: 128 IDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 175


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      ++  Y  +I GLC + K  ++  +  ++    L  + V   TL+    K  E
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L ++DEML  R   +      L++GL K G + EA++   R+ DFG+ PN+ VY A
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK      A  LFD M K  + P+   Y+ LID + +      AL+    M + G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L +  Y SL+ G  + G +  A     EMI + + P  +   SL+  +  +G +++A+
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492

Query: 241 ELQNEMMGRGL 251
            L +EM G+G+
Sbjct: 493 RLYHEMTGKGI 503



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 122/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           + GK++K D+  Y T+++GLC   +FE    ++ EM     + +    ++L++   K G+
Sbjct: 288 LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL+L+  ++D  +   +  +  LID LCK     EA   F RM   GL PN   Y+ 
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  C++  ++ A +   EM    +      Y +LI+G+ K      A      M    
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++  +  YTSL+ G    G + +A  L+HEM G+GI P      +LL   +  G + +A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 241 ELQNEM 246
           +L NEM
Sbjct: 528 KLFNEM 533



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 110/214 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  +L +Y  +I  LC   KF +++LL   M + GL  N V  + L+D + + G+   AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S L EM+D+ ++++V  +  LI+G CK G +  A  +   M +  L P V  YT+L+ G 
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C K  I +A  L+ EM  + + P    +T L+ G  +    ++A+ L N M E  V  + 
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             Y  ++ G    G + +A     EM  +GI+PD
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 133/261 (50%), Gaps = 8/261 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL---LLSEMKENGLTANTVICTTLMDAYFK 57
           M  + +  DL  YG +I G     K +D KL   LL EM + GL  + VI T+++DA  K
Sbjct: 638 MVQRGVDLDLVCYGVLIDG---SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            G+  EA  + D M++       VT+  +I+GLCK+G V EA     +M      PN   
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754

Query: 118 YTALIDGLCKKNC-IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           Y   +D L K    +++A  L + + K  ++ +T  Y  LI G+ +    +EA  L  RM
Sbjct: 755 YGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRM 813

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              GV  D   YT+++  L R   +++A  L++ M  +GI PD +   +L+      G M
Sbjct: 814 IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873

Query: 237 DEAIELQNEMMGRGLLSGSKN 257
            +A EL+NEM+ +GL+  +K 
Sbjct: 874 GKATELRNEMLRQGLIPNNKT 894



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K  +  Y ++I G C       ++  ++EM    L    V  T+LM  Y   G+
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++AL L  EM    I  ++ TF  L+ GL ++GL+R+A+  F  M ++ + PN   Y  
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTA---------------------------- 152
           +I+G C++  + +A     EM ++ ++PDT +                            
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607

Query: 153 -------YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                  YT L+ G+ +    +EAL++   M + GVDLDL  Y  L+ G  +    +   
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            L  EM  RG+ PD+++  S++    + G+  EA  + + M+  G
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 130/281 (46%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++  +  Y +++ G C + K   +  L  EM   G+  +    TTL+   F+AG 
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EM +  ++   VT+ V+I+G C+ G + +A ++   M + G+ P+   Y  
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582

Query: 121 LIDGLC----------------KKNC-------------------IERARNLFDEMPKRD 145
           LI GLC                K NC                   +E A ++  EM +R 
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +  D   Y  LIDG LKH+  K    L   M + G+  D   YTS++   S+ G  +EA 
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            ++  MI  G +P+E+   +++    + G ++EA  L ++M
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 107/220 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++M   G+  +  I T ++ +  +  + S A  ++  M  +  +V +V + VLIDGLC
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K   V EA+     +    L P+V  Y  L+ GLCK    E    + DEM      P   
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           A ++L++G  K    +EALNL  R+ + GV  +L  Y +L+  L +     EA +LF  M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              G+ P+++    L+     RG +D A+    EM+  GL
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 6/254 (2%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+K +   Y  +I G C E     +   L EM E G+  +T     L+      G+ SEA
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
              +D +     E+  + +  L+ G C+ G + EA+     M   G+  ++  Y  LIDG
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K    +    L  EM  R + PD   YT++ID   K   FKEA  + + M   G   +
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL--C-ISLLKKHYERGNMDEAIE 241
              YT+++ GL + G + EA VL  +M     +P+++   C + +L K     +M +A+E
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG--EVDMQKAVE 774

Query: 242 LQNEMMGRGLLSGS 255
           L N ++ +GLL+ +
Sbjct: 775 LHNAIL-KGLLANT 787



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V T   L+ GL K      A++ F  M   G+ P+V +YT +I  LC+   + RA+ +  
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
            M       +   Y  LIDG  K +   EA+ +K  +    +  D+  Y +LV+GL +  
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +    +  EM+     P E    SL++   +RG ++EA+ L   ++  G+
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 130/247 (52%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  ++      ++ L    +  ++K + + ++ENGL  ++V    +M  Y K G+
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++LL EM+ +  E  V+    LID L K+G V EA   F RM D  L P V  Y  
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GL K+  +++A  LF+ M  +   P+T ++  L+D + K++  + AL + ++MT + 
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y ++++GL +   +  A   FH++  + + PD +   +LL    + G + +AI
Sbjct: 643 CKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAI 701

Query: 241 ELQNEMM 247
            +  + M
Sbjct: 702 SIARDFM 708



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 117/242 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL  Y  +I  LC   + E++K L  +MK NG   + VI  TL+D +   G+        
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M        VVTF +L+D LCK+    EA   F  M   G+ PN+  Y  LI GL + 
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             IE A  L D M    + P    Y   ID + K     +A+    +M   G+  ++ A 
Sbjct: 416 GRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            + ++ L+  G L+EA+ +F+ +   G+ PD +    ++K + + G +DEA+ L +EM+ 
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535

Query: 249 RG 250
            G
Sbjct: 536 NG 537



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            I   L  Y  +I  L      E +  L  +MK  G   +      L+  + K+G+ +E  
Sbjct: 784  ISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELF 843

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             L  EM+  R +   +T+ ++I  L KS  + +A+D+F  +      P    Y  LIDGL
Sbjct: 844  ELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGL 903

Query: 126  CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
             K   +E A  LF+EM      P+   +  LI+GY K    + A  L  RM   G+  DL
Sbjct: 904  AKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDL 963

Query: 186  NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +YT LV  L   G + EA   F+E+   G+ PD I    ++    +   M+EA+ L NE
Sbjct: 964  KSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNE 1023

Query: 246  MMGRGLL 252
            M  RG++
Sbjct: 1024 MRNRGIV 1030



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 111/231 (48%), Gaps = 6/231 (2%)

Query: 22   IESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
            I   FE  K ++S   K + +T N VI +       K+    +AL    +++ S    T 
Sbjct: 839  ITELFELYKEMISRRCKPDAITYNIVISSLA-----KSNNLDKALDFFYDLVSSDFRPTP 893

Query: 81   VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
             T+  LIDGL K G + EA+  F  M D+G  PN A++  LI+G  K    E A  LF  
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 141  MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
            M    + PD  +YT L+D         EAL   N +   G+D D  AY  ++ GL +   
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 201  LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++EA  L++EM  RGI+PD     SL+      G +++A  +  E+   GL
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGL 1064



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 113/250 (45%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  +  K D   Y  +I  L   +  + +     ++  +           L+D   K G 
Sbjct: 849  MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA+ L +EM D   +     F +LI+G  K G    A   F RM + G+ P++  YT 
Sbjct: 909  LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L+D LC    ++ A   F+E+    + PD  AY  +I+G  K +  +EAL L N M   G
Sbjct: 969  LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +  DL  Y SL+  L   G +++A+ ++ E+   G+ PD     +L++ +    N + A 
Sbjct: 1029 IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAY 1088

Query: 241  ELQNEMMGRG 250
             +   MM  G
Sbjct: 1089 TVYKNMMVDG 1098



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 116/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K  L  Y  ++  L  +   E   +LL EM++ GL  N    T  +    +AG+
Sbjct: 218 MVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGK 277

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +   M D      +VT+ VLID LC +G +  A + F +M   G  P+  +Y  
Sbjct: 278 IDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYIT 337

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D       ++  +  + +M     +PD   +T L+D   K   F EA    + M + G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +L+ Y +L+ GL R G +++A  L   M   G+ P     I+ +    + G   +A+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAV 457

Query: 241 ELQNEMMGRGLL 252
           E   +M  +G++
Sbjct: 458 ETFEKMKAKGIV 469



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 115/249 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      D+  +  ++  LC    F+++      M++ G+  N     TL+    +AG 
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGR 417

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL LLD M    ++ T  T+   ID   KSG   +A++ F +M   G+ PN+    A
Sbjct: 418 IEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNA 477

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +  L +   +  A+ +F+ + +  + PD+  Y  ++  Y K     EA+NL + M   G
Sbjct: 478 SLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNG 537

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+    SL+  L + G + EA  +F  M    + P  +   +LL    + G + +AI
Sbjct: 538 CEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597

Query: 241 ELQNEMMGR 249
           EL   M+ +
Sbjct: 598 ELFESMIXK 606



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 116/246 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  +L  Y T+I GL    + ED+  LL  M+  G+        T +D + K+GE
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+   ++M    I   +V     +  L + G +REA   F  + + GL P+   Y  
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    K   ++ A NL  EM +    PD     +LID   K     EA  + +RM ++ 
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +L+ GL + G +Q+A  LF  MI +   P+ I   +LL    +   ++ A+
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELAL 632

Query: 241 ELQNEM 246
           ++ ++M
Sbjct: 633 KMFSKM 638



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           L +  K ED   +   M++  +  +     T+  A    G   +  ++L++M  +   + 
Sbjct: 132 LRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLN 191

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
             ++  LI  L +SG   EA++ + RM   GL P++  Y+AL+  L KK   E    L  
Sbjct: 192 AYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLK 251

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM    + P+   +T  I    +     EA  +  RM + G   DL  YT L+  L   G
Sbjct: 252 EMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAG 311

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L+ A+ LF +M   G  PD+++ I+LL K  + G++D   E  ++M   G +
Sbjct: 312 QLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 35/214 (16%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            YG +I GL    + E++  L  EM + G   N  I   L++ Y K G+   A  L   M+
Sbjct: 896  YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMV 955

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN--- 129
            +  I   + ++ +L+D LC +G V EA+ YF  +   GL P+   Y  +I+GL K     
Sbjct: 956  NEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRME 1015

Query: 130  --------------------------------CIERARNLFDEMPKRDMIPDTTAYTALI 157
                                             +E+A+ +++E+    + PD   Y ALI
Sbjct: 1016 EALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075

Query: 158  DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             GY   E+ + A  +   M   G + ++  Y  L
Sbjct: 1076 RGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 104/252 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ DL  Y TI   L I         +L++M++ G   N      L+    ++G 
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL +   M+   ++ ++ T+  L+  L K       +     M D GL PNV  +T 
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I  L +   I+ A  +F  M      PD   YT LID        + A  L  +M   G
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +L+   +  G L   +  + +M   G +PD +    L+    +  + DEA 
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAF 387

Query: 241 ELQNEMMGRGLL 252
              + M  +G+L
Sbjct: 388 ATFDVMRKQGIL 399


>gi|260780506|gb|ACX50799.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780508|gb|ACX50800.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780510|gb|ACX50801.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780512|gb|ACX50802.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780514|gb|ACX50803.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780516|gb|ACX50804.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780518|gb|ACX50805.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780520|gb|ACX50806.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780522|gb|ACX50807.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780524|gb|ACX50808.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780526|gb|ACX50809.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780528|gb|ACX50810.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780530|gb|ACX50811.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780532|gb|ACX50812.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780534|gb|ACX50813.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780536|gb|ACX50814.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780538|gb|ACX50815.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780540|gb|ACX50816.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780542|gb|ACX50817.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780544|gb|ACX50818.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780550|gb|ACX50821.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780552|gb|ACX50822.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780554|gb|ACX50823.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780556|gb|ACX50824.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780560|gb|ACX50826.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780562|gb|ACX50827.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780564|gb|ACX50828.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780566|gb|ACX50829.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780568|gb|ACX50830.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780570|gb|ACX50831.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780572|gb|ACX50832.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780574|gb|ACX50833.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780576|gb|ACX50834.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780578|gb|ACX50835.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780580|gb|ACX50836.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780582|gb|ACX50837.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780584|gb|ACX50838.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780586|gb|ACX50839.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780588|gb|ACX50840.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780590|gb|ACX50841.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780592|gb|ACX50842.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780594|gb|ACX50843.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780596|gb|ACX50844.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780598|gb|ACX50845.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780600|gb|ACX50846.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780602|gb|ACX50847.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780604|gb|ACX50848.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780606|gb|ACX50849.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780608|gb|ACX50850.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780610|gb|ACX50851.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780612|gb|ACX50852.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780614|gb|ACX50853.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780616|gb|ACX50854.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780618|gb|ACX50855.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780620|gb|ACX50856.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780622|gb|ACX50857.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780624|gb|ACX50858.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 183

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 94/175 (53%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+     +  +I GLC E K  +   +   M   G   N  I T L+D Y K+G   +
Sbjct: 1   KGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVED 60

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ LL  M+D   +  VVTF V+++GLCK+G V EA+DYF      GL  N   Y++LID
Sbjct: 61  AIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLID 120

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           GL K   I+ A  LF+EM ++    D+  Y ALID + KH    EA+ L  RM E
Sbjct: 121 GLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 175



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 84/171 (49%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  K   +E A 
Sbjct: 3   IQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAI 62

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L   M      PD   ++ +++G  K+   +EAL+        G+ ++   Y+SL+ GL
Sbjct: 63  RLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGL 122

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + G + EA  LF EM  +G   D     +L+    + G +DEA+ L   M
Sbjct: 123 GKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 78/155 (50%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           K G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V 
Sbjct: 19  KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVV 78

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            ++ +++GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M
Sbjct: 79  TFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 138

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +E G   D   Y +L+   ++ G + EA  LF  M
Sbjct: 139 SEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 72/141 (51%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+      ++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K  + ++A
Sbjct: 2   GIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDA 61

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           + L +RM + G   D+  ++ +V GL + G ++EA   F      G+  + +   SL+  
Sbjct: 62  IRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDG 121

Query: 230 HYERGNMDEAIELQNEMMGRG 250
             + G +DEA  L  EM  +G
Sbjct: 122 LGKAGRIDEAERLFEEMSEKG 142



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 51/108 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  +  ++ GLC   + E++       + NGL  N++  ++L+D   KAG 
Sbjct: 68  MIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGR 127

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
             EA  L +EM +         +  LID   K G V EA+  F RM +
Sbjct: 128 IDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 175


>gi|255684868|gb|ACU27923.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684870|gb|ACU27924.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684872|gb|ACU27925.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684874|gb|ACU27926.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684876|gb|ACU27927.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684878|gb|ACU27928.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684880|gb|ACU27929.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684882|gb|ACU27930.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684884|gb|ACU27931.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684886|gb|ACU27932.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684888|gb|ACU27933.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684890|gb|ACU27934.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684892|gb|ACU27935.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684894|gb|ACU27936.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684896|gb|ACU27937.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684898|gb|ACU27938.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684908|gb|ACU27943.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684910|gb|ACU27944.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684914|gb|ACU27946.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684918|gb|ACU27948.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684922|gb|ACU27950.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684930|gb|ACU27954.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684932|gb|ACU27955.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684934|gb|ACU27956.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684936|gb|ACU27957.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684938|gb|ACU27958.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684940|gb|ACU27959.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684942|gb|ACU27960.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684944|gb|ACU27961.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684946|gb|ACU27962.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684948|gb|ACU27963.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684950|gb|ACU27964.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684952|gb|ACU27965.1| At1g03560-like protein [Arabidopsis thaliana]
          Length = 193

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 1/188 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ V+++GLC
Sbjct: 1   VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V EA+DYF      GL  N   Y++LIDGL K   ++ A  LF+EM ++    D+ 
Sbjct: 61  KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            Y ALID + KH    EA+ L  RM  E G D  +  YT L+ G+ +    +EA  L+  
Sbjct: 121 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDM 180

Query: 211 MIGRGILP 218
           MI +GI P
Sbjct: 181 MIDKGITP 188



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 70/144 (48%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           F  M   G  PNVA+YT LIDG  K   +E A  L   M      PD   Y+ +++G  K
Sbjct: 2   FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           +   +EAL+  +     G+ ++   Y+SL+ GL + G + EA  LF EM  +G   D   
Sbjct: 62  NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 121

Query: 223 CISLLKKHYERGNMDEAIELQNEM 246
             +L+    +   +DEAI L   M
Sbjct: 122 YNALIDAFTKHRKVDEAIALFKRM 145



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 1/182 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G 
Sbjct: 5   MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL          + +  + +  LIDGL K+G V EA   F  M + G   +   Y A
Sbjct: 65  VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEV 179
           LID   K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + 
Sbjct: 125 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDK 184

Query: 180 GV 181
           G+
Sbjct: 185 GI 186



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 1/154 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + +GL  N++  ++L+D   KAG 
Sbjct: 40  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 99

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID   K   V EAI  F RM  + G    V  YT
Sbjct: 100 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 159

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
            LI G+ K++  E A  L+D M  + + P    +
Sbjct: 160 ILISGMFKEHRNEEALKLWDMMIDKGITPTAACF 193



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 62/119 (52%)

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           +F+ M ++   P+   YT LIDGY K  S ++A+ L +RM + G   D+  Y+ +V GL 
Sbjct: 1   VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           + G ++EA   FH     G+  + +   SL+    + G +DEA  L  EM  +G    S
Sbjct: 61  KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDS 119


>gi|260765969|gb|ACX50015.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765971|gb|ACX50016.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765973|gb|ACX50017.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765975|gb|ACX50018.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765977|gb|ACX50019.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765979|gb|ACX50020.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765981|gb|ACX50021.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765983|gb|ACX50022.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765985|gb|ACX50023.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765987|gb|ACX50024.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765989|gb|ACX50025.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765991|gb|ACX50026.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765993|gb|ACX50027.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765995|gb|ACX50028.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765997|gb|ACX50029.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260765999|gb|ACX50030.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766001|gb|ACX50031.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766003|gb|ACX50032.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766005|gb|ACX50033.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766007|gb|ACX50034.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766009|gb|ACX50035.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766011|gb|ACX50036.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766013|gb|ACX50037.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766015|gb|ACX50038.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766017|gb|ACX50039.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766019|gb|ACX50040.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766021|gb|ACX50041.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766023|gb|ACX50042.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766025|gb|ACX50043.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766027|gb|ACX50044.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766029|gb|ACX50045.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766031|gb|ACX50046.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766033|gb|ACX50047.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766035|gb|ACX50048.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766037|gb|ACX50049.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766039|gb|ACX50050.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766041|gb|ACX50051.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766043|gb|ACX50052.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766047|gb|ACX50054.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260766049|gb|ACX50055.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780310|gb|ACX50701.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780312|gb|ACX50702.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780318|gb|ACX50705.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780330|gb|ACX50711.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780332|gb|ACX50712.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780338|gb|ACX50715.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780340|gb|ACX50716.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780344|gb|ACX50718.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780346|gb|ACX50719.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780348|gb|ACX50720.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780394|gb|ACX50743.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780396|gb|ACX50744.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780398|gb|ACX50745.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780400|gb|ACX50746.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780402|gb|ACX50747.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780404|gb|ACX50748.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780406|gb|ACX50749.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780408|gb|ACX50750.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780410|gb|ACX50751.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780412|gb|ACX50752.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780414|gb|ACX50753.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780416|gb|ACX50754.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780418|gb|ACX50755.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780420|gb|ACX50756.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780422|gb|ACX50757.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780424|gb|ACX50758.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 199

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 101/192 (52%), Gaps = 1/192 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSL 191
           G D  +  YT L
Sbjct: 188 GCDQTVYTYTIL 199



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|224576641|gb|ACN56994.1| At1g03560-like protein [Capsella grandiflora]
          Length = 196

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 104/195 (53%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      GL  N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALXKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L + G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALXKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDH--- 177

Query: 234 GNMDEAIELQNEMMGRGL 251
              +EA++L + M+ +G+
Sbjct: 178 -RNEEALKLWDMMIDKGI 194



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 1/179 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        + + +    +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCRFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            L K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + G+
Sbjct: 136 ALXKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGI 194



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 1/149 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NGL  N+   ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSXFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALXKHGKVDEAMXLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            LI G+ K +  E A  L+D M  + + P
Sbjct: 168 ILISGMFKDHRNEEALKLWDMMIDKGITP 196


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 126/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +Y TII G+C E   E +  +L+ M   GL  N V   TL+     A    E   LL
Sbjct: 333 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 392

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM D    +  VTF +L+D  C++GLV   I+   +M + G  P+V  YT +I+G CK+
Sbjct: 393 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKE 452

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I+ A  L   M      P+T +YT ++ G    E + +A +L ++M + G  L+   +
Sbjct: 453 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 512

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+  L + G +++A  L  +M+  G  PD I   +++    + G  DEA+EL N M+ 
Sbjct: 513 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 572

Query: 249 RGL 251
           +G+
Sbjct: 573 KGM 575



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 122/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ GLC   ++E+++ LL+EM +     + V    L+D + + G 
Sbjct: 360 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 419

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL++ML+      V+T+  +I+G CK GL+ EA+     M   G  PN   YT 
Sbjct: 420 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 479

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC       A +L  +M ++    +   +  LI+   K    ++A+ L  +M   G
Sbjct: 480 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 539

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL +Y++++ GL + G   EA  L + M+ +G+ P+ I+  S+       G +++ I
Sbjct: 540 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 599

Query: 241 EL 242
           ++
Sbjct: 600 QM 601



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 115/244 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NT+  T ++     A    +A  L+
Sbjct: 438 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 497

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+     +  +TF  LI+ LCK GLV +AI+   +M   G  P++  Y+ +IDGL K 
Sbjct: 498 SQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 557

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + A  L + M  + M P+T  Y+++     +     + + + + + +  +  D   Y
Sbjct: 558 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLY 617

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L + G  + A      M+  G +P+E     L++     G + EA E+  E+  
Sbjct: 618 NAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCS 677

Query: 249 RGLL 252
           +G L
Sbjct: 678 KGAL 681



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 111/244 (45%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y  ++ GLC+  ++   + L+ EM       N V   TL+    + G       
Sbjct: 261 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 320

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L +M++      +  +  +IDG+CK G +  A +   RMP +GL PNV  Y  L+ GLC
Sbjct: 321 VLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLC 380

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                E    L  EM  +D   D   +  L+D + ++      + L  +M E G   D+ 
Sbjct: 381 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVI 440

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YT+++ G  + G + EA +L   M   G  P+ I    +LK         +A +L ++M
Sbjct: 441 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 500

Query: 247 MGRG 250
           + +G
Sbjct: 501 IQQG 504



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 107/217 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K +   Y  ++ GLC   ++ D++ L+S+M + G   N +   TL++   K G 
Sbjct: 465 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 524

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL +ML +     ++++  +IDGL K+G   EA++    M + G+ PN  +Y++
Sbjct: 525 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 584

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +   L ++  I +   +FD +    +  D   Y A+I    K    + A+     M   G
Sbjct: 585 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 644

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
              + + YT L+ GL+  G ++EA+ +  E+  +G L
Sbjct: 645 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 681



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 6/245 (2%)

Query: 11  PLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           P+Y  I+   C    F  +  +L ++   G   +   C  +++A    G   EAL LL +
Sbjct: 195 PMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRD 254

Query: 71  MLDSRIEVTVVTFCVLIDGLCKS---GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           +     E  VV++  ++ GLC +   G V+E ++   RM      PN+  +  LI  LC+
Sbjct: 255 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM---ACPPNIVTFNTLISYLCR 311

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
               ER   +  +M +    PD   Y  +IDG  K    + A  + NRM   G+  ++  
Sbjct: 312 NGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVC 371

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y +L+ GL      +E   L  EM  +    D++    L+    + G +D  IEL  +M+
Sbjct: 372 YNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 431

Query: 248 GRGLL 252
             G +
Sbjct: 432 EHGCM 436



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 105/235 (44%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  +C +   +++  LL ++   G   + V    ++     A        L++EM+   
Sbjct: 235 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 294

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
               +VTF  LI  LC++GL     +   +M + G  P++ +Y  +IDG+CK+  +E A 
Sbjct: 295 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAH 354

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            + + MP   + P+   Y  L+ G    E ++E   L   M +    LD   +  LV   
Sbjct: 355 EILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFF 414

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            + G +     L  +M+  G +PD I   +++    + G +DEA+ L   M   G
Sbjct: 415 CQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 107/237 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC   +  D+  +L EM   G      +   +++A  + G    A+ +L+++ 
Sbjct: 162 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 221

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                + V    ++++ +C  G V EA+     +P FG  P+V  Y A++ GLC      
Sbjct: 222 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 281

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + L +EM +    P+   +  LI    ++  F+    +  +M E G   D+  Y +++
Sbjct: 282 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 341

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            G+ + GHL+ A  + + M   G+ P+ +   +LLK        +E  EL  EM  +
Sbjct: 342 DGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK 398



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 11/205 (5%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
            ++  Y +AG+   A  L   +    +     T+  ++  LC  G + +A+     MP  
Sbjct: 132 AMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRR 188

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G  P   +Y  +++  C+      A  + +++  R    D      +++      S  EA
Sbjct: 189 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 248

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGL---SRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           L+L   +   G + D+ +Y +++ GL    R G +QE   L  EM+ R   P  I+  + 
Sbjct: 249 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEEMV-RMACPPNIVTFNT 304

Query: 227 LKKHYERGNMDEAI-ELQNEMMGRG 250
           L  +  R  + E + E+  +M+  G
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHG 329


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 121/242 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GL    + +++  L  E+K  G + N V  T ++D   KAG   + L   
Sbjct: 107 DVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 166

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM  S    T  T+ V+IDGLCK+ ++ +A   F +M   G  P+   YT LIDG  K 
Sbjct: 167 EEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 226

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ AR L D M  +   P    Y +++ G+ K +   EA  +  +M E G +  L  +
Sbjct: 227 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 286

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           TSL+      G  +EA  +  EM  RG  PD IL  SL+   +  G + EA  + + M+ 
Sbjct: 287 TSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 346

Query: 249 RG 250
           +G
Sbjct: 347 KG 348



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G +       Y  +I GLC      D+  +  +M + G   +T+  TTL+D + KA +
Sbjct: 169 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 228

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LLD ML    E T VT+  ++ G CK  ++ EA +   +M + G  P + ++T+
Sbjct: 229 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 288

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+     K   E A  +  EM  R   PD   YT+LID         EA ++ + M E G
Sbjct: 289 LLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 348

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +++   S+ G+++ A  +   M   G+ PD     SL+  + +   +D+A 
Sbjct: 349 CAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF 408

Query: 241 ELQNEMMGRGL 251
            + + M+  G+
Sbjct: 409 GVYDRMVASGI 419



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 122/275 (44%), Gaps = 36/275 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG+I+ G C      ++K ++++M+E G      I T+L+  Y   G   EA  +L EM 
Sbjct: 251 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 310

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  V+ +  LID L  +G V EA   F  M + G  P+   Y  +I    K   +E
Sbjct: 311 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 370

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD-------- 184
            A  + + M K  + PD  AY +L+DGY+K E   +A  + +RM   G+  +        
Sbjct: 371 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 430

Query: 185 ----------------------------LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
                                       L +YT L+ GL + G + EA + F EMI RGI
Sbjct: 431 HGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGI 490

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +P+     SL+    + G + EA +L  +M+  G+
Sbjct: 491 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGV 525



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 121/273 (44%), Gaps = 31/273 (11%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GL    K +++    + M +NG   + +  TTL+  + KAG+P     LL++ L
Sbjct: 10  YNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQAL 69

Query: 73  D-------------------------------SRIEVTVVTFCVLIDGLCKSGLVREAID 101
                                            +  + V+++  +I GL  S  + EA +
Sbjct: 70  KRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACE 129

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
            F  +   G  PNV  YTA+IDGL K   IE     F+EM     +P  T YT +IDG  
Sbjct: 130 LFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLC 189

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           K +   +A  +  +M + G   D   YT+L+ G S+   + EAR L   M+ +G  P  +
Sbjct: 190 KAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAV 249

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
              S++    +   ++EA E+  +M  RG   G
Sbjct: 250 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPG 282



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 116/252 (46%), Gaps = 16/252 (6%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K    D   YGTII         E +  +L  M ++G+  +     +LMD Y K     +
Sbjct: 347 KGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 406

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALI 122
           A  + D M+ S I+   VTF VL+ GL K G    A   F  M +   + P +  YT LI
Sbjct: 407 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILI 466

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGL K   +  A   F EM  R +IP+   YT+LI    K     EA  L   M ++GV+
Sbjct: 467 DGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 526

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI---------------LCISLL 227
            D+ AY++L+ GL     +  A  +F EM+ RG  P+E+               L +  +
Sbjct: 527 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 586

Query: 228 KKHYERGNMDEA 239
           K+H+ +G   EA
Sbjct: 587 KQHFSQGVAMEA 598



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+ LY ++I  L    +  +++ +   M E G   + +   T++  + K G 
Sbjct: 309 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 368

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +L+ M  S +      +  L+DG  K   V +A   + RM   G+ PN   +  
Sbjct: 369 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 428

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDT-TAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L+ GL K    +RA +LF EM +++ +P T  +YT LIDG  K     EA      M + 
Sbjct: 429 LMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDR 488

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  + + YTSL++ L++ G + EA+ L  +M+  G+ PD     +L+    +   +D A
Sbjct: 489 GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTA 548

Query: 240 IELQNEMMGRG 250
            ++  EMM RG
Sbjct: 549 WDVFQEMMKRG 559



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 4/172 (2%)

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
           E T+V++  +I GL     + EA  +F  M D G  P+V  +T LI G CK    +    
Sbjct: 4   EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           L ++  KR   PD   YT++I GY K            R       LD+ +YT+++ GL+
Sbjct: 64  LLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGY---FRAVTPKASLDVISYTTVIKGLA 119

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
               + EA  LF E+   G  P+ +   +++    + G +++ ++   EM G
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSG 171



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 55/125 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ + +   L  Y  +I GL    +  ++ L   EM + G+       T+L+ +  KAG 
Sbjct: 450 LEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGR 509

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+++M+   +   V  +  LI GL  S +V  A D F  M   G  PN   Y  
Sbjct: 510 IPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKV 569

Query: 121 LIDGL 125
           L  G 
Sbjct: 570 LRRGF 574


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 133/243 (54%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + +II  LC + K  +  LLL EM+E G+  N V  TTL+D+ FKA +   AL+L 
Sbjct: 258 DVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALY 317

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+   I V +V + VL+ GL K+G +REA   F  + +    PNV  YTAL+DGLCK 
Sbjct: 318 SQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKA 377

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  +  +M ++ + P+   Y+++I+GY+K    +EA++L  +M +  V  +   Y
Sbjct: 378 GDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTY 437

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ GL + G  + A  +  EM   G+  +  +  +L+      G + E   L  +M+ 
Sbjct: 438 GTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 497

Query: 249 RGL 251
           +G+
Sbjct: 498 KGV 500



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 28/274 (10%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ + I  D   Y T+I GLC     +++   LSEM + G+  +TV   TL+D + K G 
Sbjct: 152 LRNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGN 211

Query: 61  PSEALSLLDE----------------------------MLDSRIEVTVVTFCVLIDGLCK 92
            + A +L+DE                            M+ S  +  VVTF  +I+ LCK
Sbjct: 212 FARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCK 271

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
            G V E       M + G++PN   YT L+D L K      A  L+ +M  R +  D   
Sbjct: 272 DGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVV 331

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           YT L+ G  K    +EA      + E     ++  YT+LV GL + G L  A  +  +M+
Sbjct: 332 YTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + + P+ +   S++  + ++G ++EA+ L  +M
Sbjct: 392 EKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKM 425



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 120/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  +  ++     +  FE    L  +MK  G+  + +IC  ++    + G+
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGK 623

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +LD+M+   I   + T+ + +D   K             +  +G+  +  VY  
Sbjct: 624 MKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK     +A  + ++M  R  +PDT  + AL+ GY       +AL+  + M E G
Sbjct: 684 LIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAG 743

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +++ GLS  G ++E      EM  RG+ PD+    +L+    + GN  E++
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESM 803

Query: 241 ELQNEMMGRGLL 252
            +  EM+  GL+
Sbjct: 804 TIYCEMIADGLV 815



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 119/244 (48%), Gaps = 11/244 (4%)

Query: 9   DLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           DL L+ ++I    +     D   L+ S+M   G++ +      L+ +  K G+ S A+SL
Sbjct: 92  DLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISL 151

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L   +   I V  VT+  +I GLC+ GL  EA  +   M   G+ P+   +  LIDG CK
Sbjct: 152 LRNRV---ISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCK 208

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
                RA+ L DE+ + ++I     +T LI  Y    + +EA      M   G D D+  
Sbjct: 209 VGNFARAKALVDEISELNLI----THTILISSYYNLHAIEEAY---RDMVMSGFDPDVVT 261

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           ++S++  L + G + E  +L  EM   G+ P+ +   +L+   ++  +   A+ L ++M+
Sbjct: 262 FSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMV 321

Query: 248 GRGL 251
            RG+
Sbjct: 322 VRGI 325



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 13/226 (5%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK    +Y T+I  LC       + +++ +M+  G   +TV    LM  YF      +AL
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKAL 733

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S    M+++ I   V T+  +I GL  +GL++E   +   M   G+ P+   Y ALI G 
Sbjct: 734 STYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQ 793

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K    + +  ++ EM    ++P T+ Y  LI  + K     +A  L   M +  V  + 
Sbjct: 794 AKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNT 853

Query: 186 NAYTSLVWGLSR-CGH-----------LQEARVLFHEMI-GRGILP 218
           + Y +++ GL + C H           L EA+ L  EMI  +G +P
Sbjct: 854 STYCTMISGLCKLCTHPEVEWNKKAMYLAEAKGLLKEMIEEKGYIP 899



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 1/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC       ++ ++++M E  +  N V  +++++ Y K G   EA+SL+ +M 
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKME 426

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +     T+  +IDGL K+G    A +    M   G+  N  +  AL++ L +   I+
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIK 486

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + L  +M  + +  D   YT+LID + K    + AL+    M E  +  D+ +Y  L+
Sbjct: 487 EVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLI 546

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G +  A   +  M  +GI PD      ++    ++G+ +  ++L ++M   G+
Sbjct: 547 SGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGI 604



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 31/275 (11%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+     +I  LC   K       +S ++   ++ +TV   T++    + G   EA 
Sbjct: 125 VSPDVFALNVLIHSLC---KVGQLSFAISLLRNRVISVDTVTYNTVISGLCEHGLADEAY 181

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSG----------------LVREAI--------- 100
             L EM+   I    V+F  LIDG CK G                L+   I         
Sbjct: 182 QFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSYYNLH 241

Query: 101 ---DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
              + +  M   G  P+V  ++++I+ LCK   +     L  EM +  + P+   YT L+
Sbjct: 242 AIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLV 301

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D   K + ++ AL L ++M   G+ +DL  YT L+ GL + G L+EA   F  ++    +
Sbjct: 302 DSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEV 361

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           P+ +   +L+    + G++  A  +  +M+ + + 
Sbjct: 362 PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVF 396



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 1/244 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K++  ++  Y ++I G   +   E++  L+ +M++  +  N     T++D  FKAG+   
Sbjct: 393 KSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEV 452

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +  EM    +E        L++ L + G ++E       M   G+  +   YT+LID
Sbjct: 453 ASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLID 512

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
              K    E A +  +EM +++M  D  +Y  LI G LK          K  M E G++ 
Sbjct: 513 VFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVGADWAYKG-MREKGIEP 571

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  +  ++    + G  +    L+ +M   GI P  ++C  ++    E+G M EAI++ 
Sbjct: 572 DIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDIL 631

Query: 244 NEMM 247
           ++MM
Sbjct: 632 DQMM 635



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 4/194 (2%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           F+  + LLS     G+  +  +  TL+    K G   +A  ++++M         VTF  
Sbjct: 663 FKTHETLLSY----GIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNA 718

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+ G      V +A+  +  M + G+ PNVA Y  +I GL     I+       EM  R 
Sbjct: 719 LMHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRG 778

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           M PD   Y ALI G  K  + KE++ +   M   G+    + Y  L+   ++ G + +A 
Sbjct: 779 MRPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQAT 838

Query: 206 VLFHEMIGRGILPD 219
            L  EM  R + P+
Sbjct: 839 ELMKEMGKRRVSPN 852



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 6/175 (3%)

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
           ++  V V  F  L       G +  A      M  FG+ P++ ++ +LI        +  
Sbjct: 52  NKTRVYVSLFHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHD 111

Query: 134 ARNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL-KNRMTEVGVDLDLNAYTSL 191
             +L + +M    + PD  A   LI    K      A++L +NR+    + +D   Y ++
Sbjct: 112 QVSLVYSKMIACGVSPDVFALNVLIHSLCKVGQLSFAISLLRNRV----ISVDTVTYNTV 167

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           + GL   G   EA     EM+  GILPD +   +L+    + GN   A  L +E+
Sbjct: 168 ISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEI 222


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 142/316 (44%), Gaps = 61/316 (19%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  +   YG +I G C E    D+ +L  EM E GL  N  IC+ L+  +++ G+
Sbjct: 541 MSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGK 600

Query: 61  PSEALSLLDEMLDSRI--------------------------EVTVVTFCVLIDGLCKSG 94
             EA  +L ++ D+ +                          +   + + ++I GLCK G
Sbjct: 601 VDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLG 660

Query: 95  LVREAIDYF------GRMPD--------------------FGLH---------PNVAVYT 119
            V +A + F      G +PD                    FGL          PN+  Y 
Sbjct: 661 RVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYN 720

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LI GLCK   + RA +LF+++  + + P+   Y  LIDG+ K  +  EA  LK +M + 
Sbjct: 721 SLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKE 780

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+   +  YT L+ GL   G+++EA  L  +MI   + P+ I   +L++ +   GNM   
Sbjct: 781 GIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAI 840

Query: 240 IELQNEMMGRGLLSGS 255
            +L NEM   GLL  +
Sbjct: 841 TKLYNEMHICGLLPAN 856



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G C     +D+  L   M + G+  N + C+TL+D +FKAG+  +AL+L  E L
Sbjct: 378 YNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETL 437

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   VVT   +I+GLCK+  + EA + F RM ++    +   Y  LIDG CK   + 
Sbjct: 438 ARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLG 497

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  +  EM     +P    + + I G    +   +  +++  M+  G+  +   Y +L+
Sbjct: 498 RATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALI 557

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            G  + G+L +A +L+ EM+ +G+ P+  +C  L+   Y  G +DEA
Sbjct: 558 AGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEA 604



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  +L  Y  ++ G C   + E ++ LL  ++  GL+ N V  T L+  Y K G 
Sbjct: 190 MEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGR 249

Query: 61  PSEALSLLDEMLDS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             EA  ++ E+ ++ +I +  V +  LI+G C+ G + +A      M D G+  N+ VY 
Sbjct: 250 MEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYN 309

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I+G CK   +     L      R +  D  +Y  L+DGY +     +A    + M   
Sbjct: 310 TMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRN 369

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G       Y +L+ G    G + +A  L+  M+ RG++P+EI C +LL   ++ G  ++A
Sbjct: 370 GFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQA 429

Query: 240 IELQNEMMGRGL 251
           + L  E + RGL
Sbjct: 430 LNLWKETLARGL 441



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 117/251 (46%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + + I  D   YG +I G C   + ED+  +  EM + G+  N  +  T+++ Y K G  
Sbjct: 262 ENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRM 321

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            E   LL       + +   ++  L+DG C+ G + +A +    M   G       Y  L
Sbjct: 322 GEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTL 381

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++G C +  I+ A  L+  M KR ++P+  + + L+DG+ K    ++ALNL       G+
Sbjct: 382 LNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGL 441

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++    +++ GL +   + EA  LFH M       D +   +L+  + + G++  A +
Sbjct: 442 ARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQ 501

Query: 242 LQNEMMGRGLL 252
           ++ EM   G +
Sbjct: 502 IRIEMENLGFV 512



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 112/246 (45%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++ +Y T+I G C   +  + + LL   +  G+  +     TL+D Y + G  ++A 
Sbjct: 301 VQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAF 360

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              D M+ +    T +T+  L++G C  G + +A+  +  M   G+ PN    + L+DG 
Sbjct: 361 ETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGF 420

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K    E+A NL+ E   R +  +      +I+G  K+    EA  L +RM E     D 
Sbjct: 421 FKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDS 480

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ G  + G L  A  +  EM   G +P   +  S +   +      +  +++ E
Sbjct: 481 LTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVE 540

Query: 246 MMGRGL 251
           M  +GL
Sbjct: 541 MSAKGL 546



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 3/236 (1%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + +D+  +  EM + G       C  L++   +AG+   A+++  +M  +       T  
Sbjct: 109 QLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVA 168

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           ++    C+ G V  A D+   M + GL  N+  Y A++DG C+    E AR L   +  +
Sbjct: 169 IMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVK 228

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE-VGVDLDLNAYTSLVWGLSRCGHLQE 203
            + P+   YT L+ GY K    +EA  +   + E   + +D  AY +L+ G  + G +++
Sbjct: 229 GLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMED 288

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL--QNEMMGRGLLSGSKN 257
           A  +  EMI  G+  +  +  +++  + + G M E  +L   NE  G  L   S N
Sbjct: 289 ANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYN 344



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 44/268 (16%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML-- 72
           T+I GLC   +  +++ L   MKE     +++   TL+D Y K G+   A  +  EM   
Sbjct: 450 TVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENL 509

Query: 73  --------------------------DSRIEVTV-------VTFCVLIDGLCKSGLVREA 99
                                     D R+E++        VT+  LI G CK G + +A
Sbjct: 510 GFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDA 569

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
              +  M + GL PN+ + + L+    ++  ++ A  +  ++   DMI D +A T  I G
Sbjct: 570 CILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNI-G 628

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            + H    E+L   N  +   +      +  ++ GL + G + +AR LF ++  +G +PD
Sbjct: 629 KVAH--IIESLAGGNHQSAKIM------WNIVILGLCKLGRVADARNLFEDLKVKGFIPD 680

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMM 247
                SL+      G++D A  L++EM+
Sbjct: 681 NFTYSSLIHGCSASGSIDLAFGLRDEML 708



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 101/202 (50%), Gaps = 1/202 (0%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+ A+  AG+  +AL + DEM  +    T+ +   L++ L ++G +  A+  F +M   G
Sbjct: 100 LLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAG 159

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+      +    C+   +  A +   EM +  +  +  AY A++DGY +    + A 
Sbjct: 160 TLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVAR 219

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI-GRGILPDEILCISLLKK 229
            L + +   G+  ++  YT LV G  + G ++EA  +  E+     I+ DE+   +L+  
Sbjct: 220 KLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALING 279

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
           + +RG M++A  +++EM+  G+
Sbjct: 280 YCQRGRMEDANRVRDEMIDAGV 301



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 79/168 (47%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           +  +F +L+     +G +++A+  F  M   G    +     L++ L +   I  A  +F
Sbjct: 93  SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF 152

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
            +M     +PD      +   Y +      A +    M E+G+D++L AY +++ G  R 
Sbjct: 153 QQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           G  + AR L H +  +G+ P+ +    L+K + + G M+EA ++  E+
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEI 260


>gi|224576653|gb|ACN57000.1| At1g03560-like protein [Capsella grandiflora]
          Length = 207

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 104/195 (53%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      GL  N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDH--- 177

Query: 234 GNMDEAIELQNEMMGRGL 251
              +EA++L + M+ +G+
Sbjct: 178 -RNEEALKLWDMMIDKGI 194



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 1/160 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NGL  N++  ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
            LI G+ K +  E A  L+D M  + + P    + AL  G
Sbjct: 168 ILISGMFKDHRNEEALKLWDMMIDKGITPTAACFRALSTG 207



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 1/192 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        + + +  + +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            L K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + G+ 
Sbjct: 136 ALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGIT 195

Query: 183 LDLNAYTSLVWG 194
                + +L  G
Sbjct: 196 PTAACFRALSTG 207


>gi|224576639|gb|ACN56993.1| At1g03560-like protein [Capsella grandiflora]
          Length = 196

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 104/195 (53%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIXKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      GL  N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCXFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIXKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCXFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDH--- 177

Query: 234 GNMDEAIELQNEMMGRGL 251
              +EA++L + M+ +G+
Sbjct: 178 -RNEEALKLWDMMIDKGI 194



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 1/182 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G 
Sbjct: 13  MIXKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 72

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL        + + +    +  LIDGL K+G + EA   F  M + G   +   Y A
Sbjct: 73  VEEALDYFQTCXFNGLAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNA 132

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEV 179
           LID L K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + 
Sbjct: 133 LIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDK 192

Query: 180 GV 181
           G+
Sbjct: 193 GI 194


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 113/219 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L S M  +G+  +    + L++   K  +  EA  L +EMLD  +    VTF  LID  C
Sbjct: 193 LKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G+V  A++ + +M   G  P++  Y  LI GLCKK  +++ R L DEM    + PD  
Sbjct: 253 KNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+LV GL + G   +A  +F EM
Sbjct: 313 TYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G+ PD      ++ +  ++G++  A  L  EM   G
Sbjct: 373 LSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDG 411



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 112/213 (52%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+ E G  A+      +M  + K GE   A S+ D +    +  +VV+F  L++G  + G
Sbjct: 126 EILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + E       M   G+ P+V  Y+ LI+GLCK++ ++ A  LF+EM  R ++P+   +T
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFT 245

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LID + K+     A+ +  +M   G   DL  Y +L++GL + G L++ R L  EM   
Sbjct: 246 TLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMN 305

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 306 GLKPDKITYTTLIDGCCKEGDLETAFEFRKRMI 338



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 106/218 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK +++  L +EM + GL  N V  TTL+D + K G 
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGM 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML       ++T+  LI GLCK G +++       M   GL P+   YT 
Sbjct: 257 VDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K  +  D  AYTAL+ G  +     +A  +   M  VG
Sbjct: 317 LIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D   YT ++    + G ++ A  L  EM   G +P
Sbjct: 377 LKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVP 414



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 107/209 (51%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + LM AY ++G   +A+         +  V   T   +++ L K    +   D+
Sbjct: 64  SDIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  ++   CK+  + RA+++FD + K  + P   ++  L++GY++
Sbjct: 124 YKEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIR 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   GV  D+  Y+ L+ GL +   + EA  LF+EM+ RG++P+ + 
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ +G 
Sbjct: 244 FTTLIDVHCKNGMVDSAMEIYKQMLSQGF 272


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I   +  Y  II GL    + E +++  +EM+  GL  + +   +L++ Y KAG 
Sbjct: 334 MENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGN 393

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL ++  + +  TV+T+  LIDG C+ G + EA      M + G  P+V  YT 
Sbjct: 394 LKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTI 453

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G  K   +  AR  FDEM  + + PD  AY   I   L   S   A  L+  M   G
Sbjct: 454 LMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKG 513

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  ++ GL + G+L++A+ L  +M+  G+ PD I    L+  H ERG + EA 
Sbjct: 514 IYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 241 ELQNEMMGRGL 251
           +L N M+  GL
Sbjct: 574 KLLNGMVSDGL 584



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 1/201 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  D   Y  II GLC     +D+K L ++M  +GL  + +  T L+ A+ + G   E
Sbjct: 512 KGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLRE 571

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL+ M+   ++ +VVT+ +L+   C+ G +  A  +F +M D G+ PN   Y  LI 
Sbjct: 572 ARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 631

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LC       A   F EM +R + P+   YT LIDG  +  ++ +A+ L   M + G+  
Sbjct: 632 ALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPP 691

Query: 184 DLNAYTSLVWGLSRCGHLQEA 204
           D   + +L  G    GH+  A
Sbjct: 692 DYCTHNALFKGFDE-GHMYHA 711



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 3/248 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKEN--GLTANTVICTTLMDAYFKAGEPSE 63
           ++  +  Y T++     E + +++ +LL EM+    G + N V    ++    + G    
Sbjct: 233 VEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLEN 292

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ L+D M  S+ + +  T+  LI  L + G VR+A      M + G+ P V  Y A+I 
Sbjct: 293 AVKLVDSMRLSK-KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIH 351

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K    E A+  F EM    ++PD   Y +L++ Y K  + KEAL L   +   G+  
Sbjct: 352 GLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAP 411

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +  Y +L+ G  R G L EAR L  EM+ +G  PD      L+    +  N+  A E  
Sbjct: 412 TVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFF 471

Query: 244 NEMMGRGL 251
           +EM+ +GL
Sbjct: 472 DEMLSKGL 479



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 117/274 (42%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C      +++ L  EM E G   +    T LM+   K    + A    DEML
Sbjct: 416 YNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEML 475

Query: 73  -----------DSRI--EVTV----------------------VTFCVLIDGLCKSGLVR 97
                      ++RI  E+T+                      VT+ V+IDGLCK+G ++
Sbjct: 476 SKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLK 535

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +A     +M   GL P+   YT LI   C++  +  AR L + M    + P    YT L+
Sbjct: 536 DAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILV 595

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
               +  +   A     +M +VG++ +   Y  L+  L   G    A   FHEM+ RG+ 
Sbjct: 596 HTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLA 655

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P++     L+  +   GN  +AI L  EM   G+
Sbjct: 656 PNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI 689



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 9/243 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEM----KENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +  +I  L  E   E++  L+  M    K +  T N +I   L   + +  E     +L 
Sbjct: 277 FNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAE-----ALQ 331

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM +  I  TVVT+  +I GL K      A   F  M   GL P+V  Y +L++  CK 
Sbjct: 332 MEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKA 391

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  L  ++ +  + P    Y  LIDGY +     EA  LK  M E G   D+  Y
Sbjct: 392 GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTY 451

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T L+ G  +  +L  AR  F EM+ +G+ PD     + +       +   A +L+  MM 
Sbjct: 452 TILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMML 511

Query: 249 RGL 251
           +G+
Sbjct: 512 KGI 514



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 74/160 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D   Y  +I   C      +++ LL+ M  +GL  + V  T L+    + G 
Sbjct: 544 MVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGN 603

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     +MLD  IE   +T+ VLI  LC +G    A  +F  M + GL PN   YT 
Sbjct: 604 LYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTL 663

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           LIDG C++     A  L+ EM +  + PD   + AL  G+
Sbjct: 664 LIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 703



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 3/215 (1%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           +G+  +   C  ++     A    +  ++  EML  R+E T+VT+  L+D   K G   E
Sbjct: 196 HGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDE 255

Query: 99  AIDYFGRMPDF--GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
           A      M     G   N   +  +I  L ++  +E A  L D M +      +  Y  L
Sbjct: 256 ASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPL 314

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           I   L+    ++A  L+  M   G+   +  Y +++ GL +C   + A+V F EM   G+
Sbjct: 315 ITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGL 374

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           LPD I   SLL ++ + GN+ EA+ L  ++   GL
Sbjct: 375 LPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGL 409


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 126/263 (47%), Gaps = 16/263 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     D   Y  +I  LC  S+ E++  L  EMK  G+  +    T L+D + KAG 
Sbjct: 480 MMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGI 539

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A + LDEM+    E TVVT+  LI    K+  V  A + F  M   G  PNV  YTA
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599

Query: 121 LIDGLCKKNCIERARNLFDEM------PKRDMI----------PDTTAYTALIDGYLKHE 164
           LIDG CK   IE+A  ++  M      P  DM           P+   Y AL+DG  K  
Sbjct: 600 LIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH 659

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             K+A +L   M   G + +   Y +L+ G  +   L EA+ +FH+M+  G  P+     
Sbjct: 660 KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYS 719

Query: 225 SLLKKHYERGNMDEAIELQNEMM 247
           SL+ + ++   +D  +++ ++M+
Sbjct: 720 SLIDRLFKDKRLDLVLKVLSKML 742



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 16/254 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM- 71
           Y T+I       K   +  L   M   G   N +  T L+D Y K+G   +A  +   M 
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR 621

Query: 72  -------LDSRIEV--------TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
                  +D   ++         VVT+  L+DGLCK+  V++A D    M   G  PN  
Sbjct: 622 GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTI 681

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           VY ALIDG CK   ++ A+ +F +M +    P+   Y++LID   K +     L + ++M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E     ++  YT ++ GLS+     EA  L   M  +G  P+ +   +++    + G +
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 237 DEAIELQNEMMGRG 250
           D+ +EL  EM  +G
Sbjct: 802 DKCLELFREMGSKG 815



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 98/205 (47%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  YG ++ GLC   K +D++ LL  M  +G   NT++   L+D + KA +  EA  
Sbjct: 642 KPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQE 701

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +  +M++      V T+  LID L K   +   +    +M +    PN+ +YT +IDGL 
Sbjct: 702 VFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K    + A  L   M ++   P+   YTA+IDG+ K     + L L   M   G   +  
Sbjct: 762 KVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFV 821

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEM 211
            YT L+      GHL EA  L  EM
Sbjct: 822 TYTVLINHCCATGHLDEAYALLEEM 846



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 16/247 (6%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           LC   KFE +  ++ EM  NG   +T   + ++     A     A  L  EM  + +   
Sbjct: 464 LCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPD 523

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V T+ +LID   K+G++++A ++   M   G  P V  YT LI    K   +  A  LF+
Sbjct: 524 VYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE 583

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM----------------TEVGVDL 183
            M  +   P+   YTALIDGY K  + ++A  +  RM                  V    
Sbjct: 584 LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKP 643

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y +LV GL +   +++AR L   M   G  P+ I+  +L+    +   +DEA E+ 
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 244 NEMMGRG 250
           ++M+  G
Sbjct: 704 HKMVEHG 710



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 98/203 (48%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           N V    L+D   KA +  +A  LL+ M     E   + +  LIDG CK+  + EA + F
Sbjct: 644 NVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVF 703

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            +M + G +PNV  Y++LID L K   ++    +  +M +    P+   YT +IDG  K 
Sbjct: 704 HKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKV 763

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               EA  L   M E G   ++  YT+++ G  + G + +   LF EM  +G  P+ +  
Sbjct: 764 AKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTY 823

Query: 224 ISLLKKHYERGNMDEAIELQNEM 246
             L+      G++DEA  L  EM
Sbjct: 824 TVLINHCCATGHLDEAYALLEEM 846



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 2/245 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C  +K ++++ +  +M E+G   N    ++L+D  FK       L +L +M
Sbjct: 682 VYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKM 741

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L++     +V +  +IDGL K     EA      M + G  PNV  YTA+IDG  K   +
Sbjct: 742 LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKV 801

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           ++   LF EM  +   P+   YT LI+         EA  L   M +      +++Y  +
Sbjct: 802 DKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G  R   L     L  E+   G  P  +L   L+    + G ++ A+EL  E++   +
Sbjct: 862 IEGYKREFILSLG--LLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASM 919

Query: 252 LSGSK 256
              +K
Sbjct: 920 SMAAK 924



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 4/240 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y  +I GL   +K +++  L+  M+E G   N V  T ++D + KAG+  + L L 
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELF 808

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM         VT+ VLI+  C +G + EA      M       +V+ Y  +I+G  ++
Sbjct: 809 REMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKRE 868

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL--N 186
             +  +  L +E+ K    P    Y  LID ++K    + AL L   +    + +    N
Sbjct: 869 FIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKN 926

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YTSL++  S    +  A  LF++MI  G++PD    + LL         +EA++L + +
Sbjct: 927 LYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 6/243 (2%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL---- 67
           ++ +++   C    F  +  LL +M++       V+   L+ +    GE    ++     
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAE 439

Query: 68  --LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              +EML +   +  V        LC  G   +A      M   G  P+ + Y+ +I  L
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  + +E A  LF EM    ++PD   YT LID + K    K+A N  + M   G +  +
Sbjct: 500 CNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+    +   +  A  LF  MI +G  P+ I   +L+  + + GN+++A ++   
Sbjct: 560 VTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619

Query: 246 MMG 248
           M G
Sbjct: 620 MRG 622



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 9/246 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++       K + ++L+  EM E GL+ +         A  K G+  EALSL+++  
Sbjct: 244 YNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEK-- 301

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   + +  +I GLC++    EA+D+  RM      PNV  Y  L+ G   K  + 
Sbjct: 302 -EDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLG 360

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           R + +   M      P  T + +L+  Y K + F  A  L  +M +         Y  L+
Sbjct: 361 RCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILI 420

Query: 193 WGLSRCGHL------QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             +   G L      + A   ++EM+  G + +++  +S  +     G  ++A ++ +EM
Sbjct: 421 GSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEM 480

Query: 247 MGRGLL 252
           MG G +
Sbjct: 481 MGNGFV 486



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 87/194 (44%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           FE ++   +EM   G   N V   +        G+  +A  ++ EM+ +       T+  
Sbjct: 435 FELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSE 494

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I  LC +  V  A   F  M   G+ P+V  YT LID   K   I++A N  DEM +  
Sbjct: 495 VIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDG 554

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P    YT LI  YLK +    A  L   M   G   ++  YT+L+ G  + G++++A 
Sbjct: 555 CEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKAC 614

Query: 206 VLFHEMIGRGILPD 219
            ++  M G   +PD
Sbjct: 615 QIYARMRGDADIPD 628



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 92/249 (36%), Gaps = 32/249 (12%)

Query: 30  KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG 89
           K  L   ++ G      +   L+D + +          L E+     EV      VLI  
Sbjct: 156 KFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRK 215

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP------- 142
            C++GL   A++  GR+ DFG  P    Y AL+    + + ++ A+ +  EM        
Sbjct: 216 CCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMD 275

Query: 143 -------------------------KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
                                    K D +P+T  Y  +I G  +   F+EA++  NRM 
Sbjct: 276 EFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMR 335

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
                 ++  Y  L+ G      L   + +   MI  G  P   +  SL+  + +  +  
Sbjct: 336 STSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFS 395

Query: 238 EAIELQNEM 246
            A +L  +M
Sbjct: 396 YAYKLLKKM 404



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 90/217 (41%), Gaps = 35/217 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K ++  Y  +I G     K +    L  EM   G   N V  T L++     G 
Sbjct: 776 MEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGH 835

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS-----GLVREA---------------I 100
             EA +LL+EM  +     V ++C +I+G  +      GL+ E                I
Sbjct: 836 LDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLI 895

Query: 101 DYF---GRMP-DFGLHPNVA-----------VYTALIDGLCKKNCIERARNLFDEMPKRD 145
           D F   GR+     LH  V            +YT+LI      + I  A  LF +M +  
Sbjct: 896 DNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDG 955

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +IPD   +  L+ G ++   ++EAL L + + ++ ++
Sbjct: 956 VIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDIN 992


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 120/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC   K E +  ++  M + G+T + +  + L+DA+ KA    EAL LL  M 
Sbjct: 261 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 320

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VVTF  +IDGLCKS    EA     ++ +  L P+   +  LI G CK    E
Sbjct: 321 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFE 380

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  LF+EM  ++M PD   + ALIDG  K    + A ++ + M  +GV  ++  Y  LV
Sbjct: 381 QASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLV 440

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL + G ++E      EM+  G +P+ +   SL+         D+A++L +++   G
Sbjct: 441 HGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 122/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    ++  + +II GLC   +  ++  +  ++    L  + V    L+    KAG 
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L +EM+   ++  V+TF  LIDGLCK+G V  A D    M + G+ PNV  Y  
Sbjct: 379 FEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLCK   IE      +EM     +P++  Y +L+    +     +AL L +++   G
Sbjct: 439 LVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFG 498

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            D D   Y  LV GL + G  ++A  +  EM+G+G  PD     +     +  GN+   +
Sbjct: 499 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTM 558

Query: 241 ELQNEMMGRGLL 252
           EL   ++ +G+L
Sbjct: 559 ELLRVVLAKGML 570



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 115/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D+  Y  ++   C  S+ +++  LL  M   G T N V   +++D   K+  
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +  ++ +  +    VTF +LI G CK+G   +A   F  M    + P+V  + A
Sbjct: 344 SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E AR++ D M    + P+   Y  L+ G  K    +E       M   G
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG 463

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y SLV+ L R     +A  L  ++   G  PD +    L+   ++ G  ++AI
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAI 523

Query: 241 ELQNEMMGRG 250
            +  EM+G+G
Sbjct: 524 TVLEEMVGKG 533



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 41/282 (14%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I  LC     E+++ L   M   G   N V  + L++   K G   EA  L+
Sbjct: 115 DVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELI 174

Query: 69  DEM-----------------LDS----------------------RIEVTVVTFCVLIDG 89
            EM                 LD                       R+    VTF  LIDG
Sbjct: 175 QEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDG 234

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           LCK G   EA +    M   G  PNV  Y AL++GLCK + +ERA  + + M  + + PD
Sbjct: 235 LCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPD 292

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y+ L+D + K     EAL L + M   G   ++  + S++ GL +     EA  +  
Sbjct: 293 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIAL 352

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           ++  R ++PD++    L+    + GN ++A  L  EM+ + +
Sbjct: 353 QVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNM 394



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 122/276 (44%), Gaps = 38/276 (13%)

Query: 13  YGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y  ++  LC   +   + ++   EM  +G+    V   T+++   K+ E    + L +E+
Sbjct: 48  YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +       VVT+  LID LCK+G + EA    G M   G  PNV  Y+ LI+GLCK   I
Sbjct: 108 VKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRI 167

Query: 132 ERARNLFDEMPKR--DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE--VGVDLDLNA 187
           + AR L  EM ++  D++P+   Y + +DG  K     EA  L   + +  + V  D   
Sbjct: 168 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 227

Query: 188 YTSLVWGLSRCGH---------------------------------LQEARVLFHEMIGR 214
           +++L+ GL +CG                                  ++ A  +   M+ +
Sbjct: 228 FSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDK 287

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G+ PD I    L+    +   +DEA+EL + M  RG
Sbjct: 288 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 323



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 99/215 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C    FE +  L  EM    +  + +    L+D   KAG+   A  +LD M 
Sbjct: 366 FNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMG 425

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   VVT+ VL+ GLCKSG + E  ++   M   G  P    Y +L+  LC+ +  +
Sbjct: 426 NLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTD 485

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  ++      PDT  Y  L+DG  K    ++A+ +   M   G   D   + +  
Sbjct: 486 DALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACF 545

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            GL R G+L     L   ++ +G+LPD   C S+L
Sbjct: 546 GGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 72/158 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y  ++ GLC   + E+    L EM  +G    ++   +L+ A  +A  
Sbjct: 424 MGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASR 483

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L+ ++     +   VT+ +L+DGL KSG   +AI     M   G  P+   + A
Sbjct: 484 TDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 543

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
              GL +   +     L   +  + M+PD T  ++++D
Sbjct: 544 CFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G    A+   Y  II GLC+    E + +L  +M + G     V   TL++ Y   G 
Sbjct: 441 MEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGN 500

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  LLD M ++  E    T+  L+ G  K G +  A  YF  M + GL+PN   YT 
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   ++ A +L + M +    P+  +Y A+I+G  K   F EA  + ++M E G
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  YT+L+ GL R G  Q A  +FH+M  R  LP+     SL+    + G  DEA 
Sbjct: 621 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 680

Query: 241 ELQNEMMGRGL 251
            L  EM  +GL
Sbjct: 681 ILLKEMERKGL 691



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G   +    ++  LL  MKENG   +      L+  + K G+   A     EM+
Sbjct: 488 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +    V++  LIDG  K G V  A+    RM + G +PNV  Y A+I+GL K+N   
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS 607

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + D+M ++ ++P+   YT LIDG  ++   + A  + + M +     +L  Y+SL+
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 667

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +GL + G   EA +L  EM  +G+ PDE+   SL+      G +D A  L   M+  G
Sbjct: 668 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVG 725



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  Y ++I G C     + +  +   M + G   N+V  +TL++     G   EA
Sbjct: 270 DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEA 329

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L +L+EM++  IE TV T+ + I  LC      EAI+   RM   G  PNV  YTALI G
Sbjct: 330 LDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISG 389

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L +   +E A  L+ +M K  ++P+T  Y ALI+       F  AL + + M   G   +
Sbjct: 390 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 449

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y  ++ GL   G +++A VLF +M+  G LP  +   +L+  +  +GN++ A  L +
Sbjct: 450 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLD 509

Query: 245 EMMGRG 250
            M   G
Sbjct: 510 LMKENG 515



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 24/275 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    +L  Y ++I+GLC E K +++++LL EM+  GL  + V  T+L+D +   G 
Sbjct: 651 MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGR 710

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV--------REAIDYF--------- 103
              A  LL  M+D   +    T+ VL+ GL K  L+         EA+  F         
Sbjct: 711 IDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNF 770

Query: 104 -------GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
                   RM + G  P +  Y+ L+ GLC+K     A  L  +M +R   PD   Y +L
Sbjct: 771 EIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 830

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           +  + K+     AL + + +   G  L L+ Y +L+  L + G ++EA+ LF  M+ +  
Sbjct: 831 LIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEW 890

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             DEI+   L+    + G +D  ++L + M  +  
Sbjct: 891 NADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNF 925



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 113/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+  +  Y   I  LC     E++  L++ MK+ G   N    T L+    + G+
Sbjct: 336 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 395

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  +ML   +    VT+  LI+ LC  G    A+  F  M   G   N   Y  
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 455

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLC    IE+A  LF++M K   +P    Y  LI+GYL   +   A  L + M E G
Sbjct: 456 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 515

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D   Y  LV G S+ G L+ A   F EM+  G+ P+ +   +L+  H + G +D A+
Sbjct: 516 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIAL 575

Query: 241 ELQNEM 246
            L   M
Sbjct: 576 SLLERM 581



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 104/219 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + D   Y  ++ G     K E +     EM E GL  N V  TTL+D + K G+
Sbjct: 511 MKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGK 570

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              ALSLL+ M +      V ++  +I+GL K     EA     +M + GL PNV  YT 
Sbjct: 571 VDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTT 630

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC+    + A  +F +M KR  +P+   Y++LI G  +     EA  L   M   G
Sbjct: 631 LIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 690

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  D   +TSL+ G    G +  A +L   M+  G  P+
Sbjct: 691 LAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPN 729



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 24/263 (9%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GL  E++F +++ +  +M E GL  N +  TTL+D   + G    A  +  +M 
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 652

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             +    + T+  LI GLC+ G   EA      M   GL P+   +T+LIDG      I+
Sbjct: 653 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 712

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLK------------HES------------FKE 168
            A  L   M      P+   Y+ L+ G  K            HE+            F+ 
Sbjct: 713 HAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEI 772

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
             NL  RM+E+G +  L+ Y++LV GL R G   EA  L  +M  RG  PD  +  SLL 
Sbjct: 773 VSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI 832

Query: 229 KHYERGNMDEAIELQNEMMGRGL 251
            H +   +D A+++ + +  +G 
Sbjct: 833 AHCKNLEVDHALKIFHSIEAKGF 855



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 115/240 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC+  +F  +  +   M+ +G  ANT     ++      G+  +A+ L ++ML
Sbjct: 418 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 477

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 TVVT+  LI+G    G V  A      M + G  P+   Y  L+ G  K   +E
Sbjct: 478 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 537

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F EM +  + P+  +YT LIDG+ K      AL+L  RM E+G + ++ +Y +++
Sbjct: 538 SASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVI 597

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GLS+     EA  +  +M  +G+LP+ I   +L+      G    A ++ ++M  R  L
Sbjct: 598 NGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 657



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 120/230 (52%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E ++ L  +M  +G+  + +   TL++   K G+  EA  +L ++    +   V T+  L
Sbjct: 222 EGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSL 281

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I G C++  +  A   F RM   G  PN   Y+ LI+GLC +  ++ A ++ +EM ++ +
Sbjct: 282 ILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI 341

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P    YT  I      E  +EA+ L  RM + G   ++  YT+L+ GLSR G L+ A  
Sbjct: 342 EPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIG 401

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           L+H+M+  G++P+ +   +L+ +    G    A+++ + M G G L+ ++
Sbjct: 402 LYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 451



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 73/147 (49%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           L  Y T++ GLC + +F +++ L+ +MKE G   +  I  +L+ A+ K  E   AL +  
Sbjct: 789 LDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFH 848

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
            +     ++ +  +  LI  LCK+G V EA   F  M +   + +  V+T L+DGL K+ 
Sbjct: 849 SIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEG 908

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTAL 156
            ++    L   M  ++  P+   Y  L
Sbjct: 909 ELDLCMKLLHIMESKNFTPNIQTYVIL 935



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 89/188 (47%), Gaps = 1/188 (0%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL-VREAIDYFGRMPDFGLHPNVAVYTALID 123
           +S+L+ ++  R+        +L+   C++   +R   D+   +   G   ++     L+ 
Sbjct: 154 ISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLI 213

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            L K   +E ARNL+ +M    + P    +  LI+   K    +EA  + +++ +  +  
Sbjct: 214 QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP 273

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  YTSL+ G  R  +L  A  +F  M+  G  P+ +   +L+      G +DEA+++ 
Sbjct: 274 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 333

Query: 244 NEMMGRGL 251
            EM+ +G+
Sbjct: 334 EEMIEKGI 341



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 96/243 (39%), Gaps = 24/243 (9%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFK--- 57
           M+ K +  D   + ++I G  +  + + + LLL  M + G   N    + L+    K   
Sbjct: 686 MERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECL 745

Query: 58  --------------AGEPSE-------ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV 96
                         +  P E         +LL  M +   E T+ T+  L+ GLC+ G  
Sbjct: 746 LLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRF 805

Query: 97  REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
            EA      M + G  P+  +Y +L+   CK   ++ A  +F  +  +      + Y AL
Sbjct: 806 YEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRAL 865

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           I    K    +EA  L + M E   + D   +T LV GL + G L     L H M  +  
Sbjct: 866 ICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNF 925

Query: 217 LPD 219
            P+
Sbjct: 926 TPN 928



 Score = 40.0 bits (92), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 42/94 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ K  +  L +Y  +I  LC   + E+++ L   M E    A+ ++ T L+D   K GE
Sbjct: 850 IEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGE 909

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
               + LL  M        + T+ +L   L + G
Sbjct: 910 LDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 943


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 131/251 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G+ ++ ++ +Y  I+ GLC +    +++ L S++   G+  +    T L+  +   G+
Sbjct: 209 MEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQ 268

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LL +M+D  + + V T+ +LID LCK G++ +A D    M + G  P++  +  
Sbjct: 269 WREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNT 328

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C  N +  AR LFD   +  + PD  +Y  LI GY K+    EAL+L N+M    
Sbjct: 329 LMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKK 388

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y+SL+ GL + G +  A  LF  +   G  P+ I    +L    +   +D+AI
Sbjct: 389 LAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAI 448

Query: 241 ELQNEMMGRGL 251
           EL N M  RGL
Sbjct: 449 ELFNLMFERGL 459



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 104/196 (53%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+  Y  +I G C  ++ +++  L ++M    L  N V  ++L+D   K+G  S A 
Sbjct: 354 ITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAW 413

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L   + D      V+T+ +++D LCK  LV +AI+ F  M + GL PNV+ Y  LI+G 
Sbjct: 414 ELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGY 473

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   I+ A NLF+EM +R+++PD+  Y  LIDG  K      A  L N M + G  +D+
Sbjct: 474 CKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDV 533

Query: 186 NAYTSLVWGLSRCGHL 201
             Y  L    S+  H+
Sbjct: 534 ITYNILFDAFSKIQHV 549



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 108/205 (52%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + DL  + T++ G C+ +   +++ L     E G+T +      L+  Y K     EALS
Sbjct: 320 RPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALS 379

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L ++M   ++   +VT+  LIDGLCKSG +  A + F  + D G  PNV  Y  ++D LC
Sbjct: 380 LFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALC 439

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +++A  LF+ M +R + P+ ++Y  LI+GY K +   EA+NL   M    +  D  
Sbjct: 440 KIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSV 499

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  L+ GL + G +  A  LF+ M
Sbjct: 500 TYNCLIDGLCKSGRISHAWELFNVM 524



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 117/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  ++  Y  +I  LC +     +  + + M E G   + V   TLM  Y    +
Sbjct: 279 MVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYND 338

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D   +  I   V ++ +LI G CK+  + EA+  F +M    L PN+  Y++
Sbjct: 339 VVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSS 398

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I  A  LF  +      P+   Y  ++D   K +   +A+ L N M E G
Sbjct: 399 LIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG 458

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++++Y  L+ G  +   + EA  LF EM  R ++PD +    L+    + G +  A 
Sbjct: 459 LTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAW 518

Query: 241 ELQNEMMGRG 250
           EL N M   G
Sbjct: 519 ELFNVMHDGG 528



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 108/211 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L  + + G   N +  TT+M      GE  +AL   D ++     +  VT+  LI+GLC
Sbjct: 135 VLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLC 194

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K GL REA +   +M    + PNV +Y  ++DGLCK   +  AR+L+ ++  R + PD  
Sbjct: 195 KIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVF 254

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LI G+     ++E   L   M +  V+L++  Y  L+  L + G L +A  + + M
Sbjct: 255 TYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLM 314

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           I RG  PD +   +L+  +    ++ EA +L
Sbjct: 315 IERGQRPDLVTFNTLMSGYCLYNDVVEARKL 345



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 107/232 (46%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           TI+ GLCI  +   +      +   G   + V   TL++   K G   EA  LL +M   
Sbjct: 153 TIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQ 212

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +   VV + +++DGLCK GLV EA D +  +   G+ P+V  YT LI G C        
Sbjct: 213 VVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREV 272

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L  +M  R++  +   Y  LID   K     +A +++N M E G   DL  + +L+ G
Sbjct: 273 TRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSG 332

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
                 + EAR LF      GI PD      L+  + +   +DEA+ L N+M
Sbjct: 333 YCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKM 384



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 1/236 (0%)

Query: 16  IIWGLCIESKFEDSKLLLS-EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +I G  ++ K   + + LS +M   G+T + V  + L++ Y   G    A S+L  +L  
Sbjct: 83  MILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKR 142

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
             ++  +T   ++ GLC +G VR+A+++   +   G   +   Y  LI+GLCK      A
Sbjct: 143 GYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREA 202

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L  +M  + + P+   Y  ++DG  K     EA +L + +   G+D D+  YT L+ G
Sbjct: 203 FELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHG 262

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               G  +E   L  +M+ R +  +      L+    ++G + +A +++N M+ RG
Sbjct: 263 FCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERG 318



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 76/162 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  ++  Y ++I GLC   +   +  L S + + G + N +    ++DA  K   
Sbjct: 384 MNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQL 443

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L + M +  +   V ++ +LI+G CKS  + EA++ F  M    L P+   Y  
Sbjct: 444 VDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNC 503

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           LIDGLCK   I  A  LF+ M       D   Y  L D + K
Sbjct: 504 LIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 89/201 (44%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++ +  K      A+SL  +M    I  ++VT  +LI+  C  G +  A    G +   G
Sbjct: 84  ILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRG 143

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
              N    T ++ GLC    + +A    D +  +  + D   Y  LI+G  K    +EA 
Sbjct: 144 YQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAF 203

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L ++M    V  ++  Y  +V GL + G + EAR L+ +++GRGI PD      L+   
Sbjct: 204 ELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGF 263

Query: 231 YERGNMDEAIELQNEMMGRGL 251
              G   E   L  +M+ R +
Sbjct: 264 CGLGQWREVTRLLCDMVDRNV 284


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 120/245 (48%), Gaps = 5/245 (2%)

Query: 10  LPLYGTIIWGLCIE--SKFEDSKLLL---SEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +P   T  +  CI   SK  D    L   + M E  L  + V    L+    KAG   +A
Sbjct: 527 MPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQA 586

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
            +L +EM+   ++  V+TF  LIDGLCK+G V  A D    M + G+ PNV  Y AL+ G
Sbjct: 587 SALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHG 646

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK   IE A    +EM     +PD+  Y +L+    +     +AL L + +   G D D
Sbjct: 647 LCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 706

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y  LV GL + G  ++A  +  EM+G+G  PD +   +L+    + G+++EA  L  
Sbjct: 707 TVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHG 766

Query: 245 EMMGR 249
           +M  R
Sbjct: 767 DMSSR 771



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 5/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM--KENGLTANTVICTTLMDAYFKA 58
           M  ++   ++  Y  +I GLC   + ++++ L+ EM  K   +  N +   + +D   K 
Sbjct: 277 MSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQ 336

Query: 59  GEPSEALSLLDEMLDSRIEVT--VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
              +EA  L+  + D  + V+   VTF  LIDGLCK G + EA   F  M   G  PNV 
Sbjct: 337 SMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 396

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y AL++GLCK + +ERA  + + M  + + PD   Y+ L+D + K     EAL L + M
Sbjct: 397 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 456

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-IGRGILPDEILCISLLKKHYERGN 235
              G   ++  + S++ GL +     EA  +F +M +  G++PD+I   +L+   +  G 
Sbjct: 457 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGR 516

Query: 236 MDEAIELQNEM 246
             +A  L + M
Sbjct: 517 AGQAEALLDAM 527



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 5/239 (2%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEM--KENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
            Y  +I GLC   + ++++ L+ EM  K   +  N +   + +D   K    +EA  L+  
Sbjct: 783  YSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRS 842

Query: 71   MLDSRIEVT--VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            + D  + V+   VTF  LIDGLCK G   EA + F  M   G  PNV  Y  L++GLCK 
Sbjct: 843  LRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKT 902

Query: 129  NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
            + +ERA  + + M  + + PD   Y+ L+D + K     EAL L + M   G   ++  +
Sbjct: 903  DKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTF 962

Query: 189  TSLVWGLSRCGHLQEARVLFHEM-IGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             S++ GL +     EA  +F +M +  G+ PD+I   +L+   +  G   +A  L + M
Sbjct: 963  NSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM 1021



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 123/256 (48%), Gaps = 8/256 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +   +  Y TII GLC  ++      L  E+ E G   + V   TL+D+  KAG+
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGD 266

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP--DFGLHPNVAVY 118
             EA  L  +M        VVT+ VLI+GLCK G + EA +    M      + PN+  Y
Sbjct: 267 LEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITY 326

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRD----MIPDTTAYTALIDGYLKHESFKEALNLKN 174
            + +DGLCK++    A  L   +  RD    + PDT  ++ LIDG  K     EA ++ +
Sbjct: 327 NSFLDGLCKQSMTAEACELMRSL--RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M   G   ++  Y +LV GL +   ++ A  +   M+ +G+ PD I    L+    +  
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 444

Query: 235 NMDEAIELQNEMMGRG 250
            +DEA+EL + M  RG
Sbjct: 445 RVDEALELLHGMASRG 460



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 113/238 (47%), Gaps = 3/238 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C    FE +  L  EM    L  + +    L+D   KAG+   A  +LD M 
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +   VVT+  L+ GLCKSG + EA  +   M   G  P+   Y +L+  LC+ +  +
Sbjct: 630 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  E+      PDT  Y  L+DG  K    ++A+ +   M   G   D+  Y +L+
Sbjct: 690 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749

Query: 193 WGLSRCGHLQEARVLFHEM---IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L + G L+EAR L  +M   + R  +P+ +    L+    + G +DEA EL  EMM
Sbjct: 750 DSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMM 807



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 5/244 (2%)

Query: 13  YGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y  ++  LC   +   + ++   EM  +G+    V   T+++   K+ E    + L +E+
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           ++      VVT+  LID LCK+G + EA    G M      PNV  Y+ LI+GLCK   I
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302

Query: 132 ERARNLFDEMPKR--DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE--VGVDLDLNA 187
           + AR L  EM ++  D++P+   Y + +DG  K     EA  L   + +  + V  D   
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 362

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +++L+ GL +CG + EA  +F +MI  G +P+ I   +L+    +   M+ A  +   M+
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422

Query: 248 GRGL 251
            +G+
Sbjct: 423 DKGV 426



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 32/282 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMK-ENGLTANTVICTTLMDAYFKAG 59
           M  +    ++  + +II GLC   +  ++  +  +M  ++GL  + +   TL+D  F+ G
Sbjct: 456 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTG 515

Query: 60  EPSEALSLLDEMLD-------------------SR--------IEVTVV----TFCVLID 88
              +A +LLD M D                   SR        +E+ +V    TF +LI 
Sbjct: 516 RAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIA 575

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           G CK+G   +A   F  M    L P+V  + ALIDGLCK   +E AR++ D M    + P
Sbjct: 576 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 635

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   Y AL+ G  K    +EA      M   G   D   Y SLV+ L R     +A  L 
Sbjct: 636 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 695

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            E+   G  PD +    L+   ++ G  ++AI +  EM+G+G
Sbjct: 696 SELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKG 737



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 120/247 (48%), Gaps = 8/247 (3%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            +  D   + T+I GLC   + +++  +  +M   G   N V    LM+   K  +   A 
Sbjct: 850  VSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAH 909

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            ++++ M+D  +   V+T+ VL+D  CK+  V EA++    M   G  PNV  + ++IDGL
Sbjct: 910  AMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGL 969

Query: 126  CKKNCIERARNLFDEMP-KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK +    A  +FD+M  K  + PD   Y  LIDG  +     +A  L + M     D D
Sbjct: 970  CKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPD 1025

Query: 185  LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              A+   + GLS+ G +  A    H M+   ++PD++    L+    + GN ++A  L  
Sbjct: 1026 TYAFNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFE 1082

Query: 245  EMMGRGL 251
            EM+ + L
Sbjct: 1083 EMVAKNL 1089



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 102/208 (49%), Gaps = 8/208 (3%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y  ++ GLC   K E +  ++  M + G+T + +  + L+DA+ KA    EAL LL  M 
Sbjct: 892  YNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMA 951

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCI 131
                   VVTF  +IDGLCKS    EA   F  M    GL P+   Y  LIDGL +    
Sbjct: 952  SRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWA 1011

Query: 132  ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             +A  L D MP     PDT A+   I+G  K      AL+   RM E+ +  D   +  L
Sbjct: 1012 GQAEVLLDAMPD----PDTYAFNCCINGLSKLGDVSRALH---RMLELELVPDKVTFNIL 1064

Query: 192  VWGLSRCGHLQEARVLFHEMIGRGILPD 219
            + G  + G+ ++A  LF EM+ + + PD
Sbjct: 1065 IAGACKAGNFEQASALFEEMVAKNLQPD 1092



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%), Gaps = 7/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN++ D+  +G +I GLC   + E ++ +L  M   G+  N V    L+    K+G 
Sbjct: 593 MVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGR 652

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   L+EM+ S      +T+  L+  LC++    +A+     +  FG  P+   Y  
Sbjct: 653 IEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNI 712

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL----KNRM 176
           L+DGL K    E+A  + +EM  +   PD   Y  LID   K    +EA  L     +R+
Sbjct: 713 LVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRV 772

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG--ILPDEILCISLLKKHYERG 234
           +   V  ++  Y+ L+ GL + G + EAR L  EM+ +   +LP+ I   S L    ++ 
Sbjct: 773 SRCCVP-NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQS 831

Query: 235 NMDEAIELQNEM 246
            M EA EL   +
Sbjct: 832 MMAEACELMRSL 843



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 120/275 (43%), Gaps = 32/275 (11%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC   K E +  ++  M + G+T + +  + L+DA+ KA    EAL LL  M 
Sbjct: 398 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 457

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCI 131
                  VVTF  +IDGLCKS    EA   F  M    GL P+   Y  LIDGL +    
Sbjct: 458 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRA 517

Query: 132 ERARNLFDEMPKRD-------------------------------MIPDTTAYTALIDGY 160
            +A  L D MP  D                               ++PD   +  LI G 
Sbjct: 518 GQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGA 577

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K  +F++A  L   M    +  D+  + +L+ GL + G ++ AR +   M   G+ P+ 
Sbjct: 578 CKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNV 637

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           +   +L+    + G ++EA +   EM+  G +  S
Sbjct: 638 VTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDS 672



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 37/227 (16%)

Query: 57  KAGEPSEALSLLDEMLDSR---------------------IEVT-------------VVT 82
           K+G P++A+ L    L  R                     +E T             V  
Sbjct: 123 KSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRIRSSSRSVAD 182

Query: 83  FCVLIDGLCKSGLVREAIDYF-GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           + +++  LC++G    A++ F G M   G+ P +  Y  +I+GLCK N +     LF+E+
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 242

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            +R   PD   Y  LID   K    +EA  L   M+      ++  Y+ L+ GL + G +
Sbjct: 243 VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRI 302

Query: 202 QEARVLFHEMIGRG--ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            EAR L  EM  +   +LP+ I   S L    ++    EA EL   +
Sbjct: 303 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL 349



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 82/191 (42%), Gaps = 29/191 (15%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K +  D+  Y  ++   C  S  +++  LL  M   G T N V   +++D   K+ +
Sbjct: 915  MVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQ 974

Query: 61   PSEALSLLDEM-LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD----------- 108
              EA  + D+M L   +    +T+C LIDGL ++G   +A      MPD           
Sbjct: 975  SGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCIN 1034

Query: 109  ---------FGLH--------PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                       LH        P+   +  LI G CK    E+A  LF+EM  +++ PD  
Sbjct: 1035 GLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVM 1094

Query: 152  AYTALIDGYLK 162
             + ALIDG  K
Sbjct: 1095 TFGALIDGLCK 1105



 Score = 60.8 bits (146), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 82/204 (40%), Gaps = 37/204 (18%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYF-GRMPDFGLHPN----------------------- 114
           T+ +F   ++ L KSG   +AID F  R+P     PN                       
Sbjct: 110 TIFSFNKYLNLLVKSGSPAKAIDLFRSRLPP-RCRPNHFTYSTLLRATYKAGGDVERTLG 168

Query: 115 -----------VAVYTALIDGLCKKNCIERARNLF-DEMPKRDMIPDTTAYTALIDGYLK 162
                      VA Y  ++  LC+     RA  +F  EM +  + P    Y  +I+G  K
Sbjct: 169 FFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCK 228

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                  + L   + E G   D+  Y +L+  L + G L+EAR L  +M  R  +P+ + 
Sbjct: 229 SNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVT 288

Query: 223 CISLLKKHYERGNMDEAIELQNEM 246
              L+    + G +DEA EL  EM
Sbjct: 289 YSVLINGLCKVGRIDEARELIQEM 312



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 29/161 (18%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMK-ENGLTANTVICTTLMDAYFKAG 59
            M  +    ++  + +II GLC   +  ++  +  +M  ++GL  + +   TL+D  F+ G
Sbjct: 950  MASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTG 1009

Query: 60   EPSEALSLLDEMLD-------------------SR-----IEVTVV----TFCVLIDGLC 91
               +A  LLD M D                   SR     +E+ +V    TF +LI G C
Sbjct: 1010 WAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGAC 1069

Query: 92   KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            K+G   +A   F  M    L P+V  + ALIDGLCK   +E
Sbjct: 1070 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 10   LPLYGTIIWGLCIE--SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
            +P   T  +  CI   SK  D    L  M E  L  + V    L+    KAG   +A +L
Sbjct: 1021 MPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASAL 1080

Query: 68   LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
             +EM+   ++  V+TF  LIDGLCK+G V    D
Sbjct: 1081 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWD 1114


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 125/234 (53%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D  +Y  +I   C +   + +  LL+EMK+  +  + +  T+L+D   K  +  +  +
Sbjct: 210 KPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRT 269

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM+   I   V TF  +IDGLCK G V +A +    M + G+ PN   Y  ++DG C
Sbjct: 270 LFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYC 329

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            +  + RAR +FD M  + + PD  +YTALI+GY++ +   +A+ L   +++ G+   + 
Sbjct: 330 LRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIV 389

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             + L+ GL   G  + A++ F EM   G +P+     +LL  +++ G ++EA+
Sbjct: 390 TCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAM 443



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 132/252 (52%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           NI  D+  + ++I GLC E K ED++ +++ M E G+  N +    +MD Y   G+   A
Sbjct: 278 NIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRA 337

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             + D M+D  IE  ++++  LI+G  +   + +A+  F  +   GL P++   + L+ G
Sbjct: 338 RRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRG 397

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L +    E A+  FDEM     IP+   +  L+ GY K+   +EA++  +++     D +
Sbjct: 398 LFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTN 457

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  YT+++ GL + G L +A   F ++   G+ PD I   +++  + + G +DEA ++  
Sbjct: 458 IQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR 517

Query: 245 EMMGRGLLSGSK 256
           +M   G L  ++
Sbjct: 518 KMEDNGCLPDNR 529



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 125/249 (50%), Gaps = 1/249 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPS 62
           K I  +   + T+I GL  E+K +D+  L  ++ +EN    + V+  T+MD   K G   
Sbjct: 136 KGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQ 195

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  LL  M     +     + ++ID  CK G++  A      M    + P++  YT+LI
Sbjct: 196 KAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLI 255

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGL K +  E+ R LF EM   ++ PD   + ++IDG  K    ++A  +   M E GV+
Sbjct: 256 DGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVE 315

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +   Y  ++ G    G +  AR +F  MI +GI PD I   +L+  + E+  MD+A++L
Sbjct: 316 PNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQL 375

Query: 243 QNEMMGRGL 251
             E+   GL
Sbjct: 376 FREISQNGL 384



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 107/216 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ D+  Y  +I G   + K + +  L  E+ +NGL  + V C+ L+   F+ G 
Sbjct: 344 MIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGR 403

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A    DEM  +     + T C L+ G  K+GLV EA+ +F ++       N+ +YTA
Sbjct: 404 TECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTA 463

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK   +++A   F+++P   + PD   YTA+I GY +     EA ++  +M + G
Sbjct: 464 VINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
              D   Y  +V G  R   + E +    E+ G+  
Sbjct: 524 CLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSF 559



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 122/244 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D  +YGT++ GLC +   + +  LL  M++     +T I   ++DA+ K G    A S
Sbjct: 175 EPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATS 234

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL+EM    I   ++T+  LIDGL K     +    F  M    ++P+V  + ++IDGLC
Sbjct: 235 LLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLC 294

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+  +E A  +   M ++ + P+   Y  ++DGY        A  + + M + G++ D+ 
Sbjct: 295 KEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDII 354

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +YT+L+ G      + +A  LF E+   G+ P  + C  LL+  +E G  + A    +EM
Sbjct: 355 SYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEM 414

Query: 247 MGRG 250
              G
Sbjct: 415 QAAG 418



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 123/247 (49%), Gaps = 1/247 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D     T++   C+  + +    +L+   + G+  N V  TTL+   F   +  +A+
Sbjct: 103 IPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAV 162

Query: 66  SLLDEMLDSRI-EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
            L  +++   I E   V +  ++DGLCK G  ++A D    M      P+  +Y  +ID 
Sbjct: 163 HLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDA 222

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK   ++ A +L +EM ++++ PD   YT+LIDG  K   +++   L   M  + +  D
Sbjct: 223 FCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPD 282

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  + S++ GL + G +++A  +   MI +G+ P+EI    ++  +  RG M  A  + +
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFD 342

Query: 245 EMMGRGL 251
            M+ +G+
Sbjct: 343 SMIDKGI 349



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 35/188 (18%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K  +     ++ GL    + E +K+   EM+  G   N     TL+  YFK G   EA+
Sbjct: 384 LKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAM 443

Query: 66  SLLDEML----DSRIEV-------------------------------TVVTFCVLIDGL 90
           S   ++     D+ I++                                V+T+  +I G 
Sbjct: 444 SHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGY 503

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           C+ GL+ EA D   +M D G  P+   Y  ++ G  + + +   +    E+  +    + 
Sbjct: 504 CQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEA 563

Query: 151 TAYTALID 158
                L+D
Sbjct: 564 ATVELLMD 571



 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 46/100 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y  +I G C E   +++K +L +M++NG   +      ++  +F++ + SE  
Sbjct: 489 LHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMK 548

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
           + L E+          T  +L+D + +   +   I  F R
Sbjct: 549 AFLKEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFHR 588


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 124/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  +   Y T+I GLC+  +  +   +L   +  G     +   ++++ + KAG 
Sbjct: 482 MKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGM 541

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++  +M    I   +VT+   IDG CK+     A+     +   GL P++A Y +
Sbjct: 542 MGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNS 601

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C++  +  A  +   M K  ++P+ + Y + I GY   +  +EAL    +M + G
Sbjct: 602 LIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEG 661

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +DLD   YT+L+ G S+ G++  A  L+ EM+ +G +PD I   +L       G++D+A 
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDAR 721

Query: 241 ELQNEM 246
           +L +EM
Sbjct: 722 KLLDEM 727



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K  +  Y +++   C+    +++  L +EM   G T N V  TTLM  +     
Sbjct: 412 MNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAA 471

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +LL EM  + +     T+  LI+GLC  G V E  +   R    G  P    Y +
Sbjct: 472 FDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G  K   +  A  ++ +M  + + P+   YT+ IDGY K      AL + N +   G
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ AY SL++G  + G++  A  +   M+  G+LP+  +  S +  +     M+EA+
Sbjct: 592 LRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651

Query: 241 ELQNEMMGRGL 251
               +M+  G+
Sbjct: 652 RFYEKMIKEGI 662



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 112/240 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G         +  +  +M   G+  N V  T+ +D Y K      AL +L+++ 
Sbjct: 529 YNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVR 588

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   +  +  LI G C+ G +  A+     M   GL PN++VY + I G      +E
Sbjct: 589 CKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMME 648

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   +++M K  +  DT  YT LIDG+ K  +   AL L + M   G   D   +T+L 
Sbjct: 649 EALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALT 708

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL R G + +AR L  EM    I P+ ++   L+  +   G + EA  L +EM+ R ++
Sbjct: 709 HGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIM 768



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 96/192 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ K ++ D+  Y ++I+G C E     +  +L  M ++GL  N  +  + +  Y     
Sbjct: 587 VRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKM 646

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL   ++M+   I++   T+  LIDG  K G V  A+  +  M   G  P+   +TA
Sbjct: 647 MEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTA 706

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L  GLC+   I+ AR L DEM + D+ P+   Y  LI+GYL++   +EA  L + M E  
Sbjct: 707 LTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERK 766

Query: 181 VDLDLNAYTSLV 192
           +  D   Y  LV
Sbjct: 767 IMPDDTTYDILV 778



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 120/251 (47%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ D  +    I  LC       + L+L +M++ G         +++D   K G 
Sbjct: 203 MPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGR 262

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL + DE+L +  +++VV    L+ G C    VR+A+D F      GL P    YT 
Sbjct: 263 MEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTV 322

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  ++   E+A  L  +M    ++P T  +  +I G L  + +K+A++L   M + G
Sbjct: 323 LIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSG 382

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  L+  L +   ++EA  L+ +M   G+ P  +   SLL  +   G MDEA+
Sbjct: 383 IP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAV 441

Query: 241 ELQNEMMGRGL 251
           +L  EM G+G 
Sbjct: 442 KLYTEMPGKGF 452



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 116/244 (47%), Gaps = 11/244 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANT-----VICTTLMDAYFKAGEPSEALSL 67
           Y  +I G   E   E +  L  +M+++GL  +T     VI   L D  +K     +A+SL
Sbjct: 320 YTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWK-----DAVSL 374

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             EM DS I     T+ +LI  LC+   +REA++ + +M + G+ P +  Y +L+   C 
Sbjct: 375 FKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCV 433

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
             C++ A  L+ EMP +   P+   YT L+ G++   +F +A  L   M + GV  +   
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y +L+ GL   G + E   +       G +P  +   S++    + G M  A  +  +M 
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553

Query: 248 GRGL 251
            +G+
Sbjct: 554 AKGI 557



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 106/220 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y + I G C  S  + +  +L++++  GL  +     +L+  + + G 
Sbjct: 552 MCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGN 611

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL +L  ML   +   +  +   I G     ++ EA+ ++ +M   G+  + A YT 
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTT 671

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +  A  L+ EM  +  IPD   +TAL  G  ++    +A  L + M  + 
Sbjct: 672 LIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLD 731

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  ++  Y  L+ G  R G LQEA  L  EM+ R I+PD+
Sbjct: 732 IRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDD 771



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 99/240 (41%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC   K  ++  L  +M E G+    V   +L+  Y   G   EA+ L  EM 
Sbjct: 389 YNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMP 448

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VVT+  L+ G        +A      M   G+  N   Y  LI+GLC    + 
Sbjct: 449 GKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVC 508

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               +         +P    Y ++I+G++K      A  +  +M   G+  ++  YTS +
Sbjct: 509 EVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +      A  + +++  +G+ PD     SL+    + GNM  A+++   M+  GLL
Sbjct: 569 DGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLL 628



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 104/221 (47%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
            M+  G+T +    T L+    ++   ++AL+LL EM      +    F V++    K G
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
           +  +A+  F  MP   + P+  V +  I  LCK     RA  +  +M     +P    + 
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +++D  +K    +EAL++K+ +   G  + +   T+L+ G      +++A  +F E +  
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD 311

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           G++P ++    L++   E G  ++A EL  +M   GLL  +
Sbjct: 312 GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPST 352


>gi|15222491|ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332195999|gb|AEE34120.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 257

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 115/221 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   +IKAD+ +   I+  LC +    +++ L +EM E G+  N +    ++D++  +G 
Sbjct: 1   MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL  M++ +I   +VTF  LI+   K   V EA + +  M  + + P    Y +
Sbjct: 61  WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG CK++ ++ A+ + D M  +   PD   ++ LI+GY K +     + +   M   G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  +   YT+L+ G  + G L  A+ L +EMI  G+ PD I
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYI 221



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 110/216 (50%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M ++ + A+ VI T ++D   K G    A +L  EM +  I   V+T+  +ID  C SG 
Sbjct: 1   MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
             +A      M +  ++P++  ++ALI+   K+  +  A  ++ EM +  + P T  Y +
Sbjct: 61  WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +IDG+ K +   +A  + + M   G   D+  +++L+ G  +   +     +F EM  RG
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I+ + +   +L+    + G++D A +L NEM+  G+
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 101/211 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y  +I   C   ++ D+  LL  M E  +  + V  + L++A+ K  +
Sbjct: 36  MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK 95

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  +  EML   I  T +T+  +IDG CK   V +A      M   G  P+V  ++ 
Sbjct: 96  VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 155

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++    +F EM +R ++ +T  YT LI G+ +      A +L N M   G
Sbjct: 156 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 215

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           V  D   +  ++ GL     L++A  +  ++
Sbjct: 216 VAPDYITFHCMLAGLCSKKELRKAFAILEDL 246



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 85/185 (45%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M  S I+  VV    ++D LCK G    A + F  M + G+ PNV  Y  +ID  C    
Sbjct: 1   MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A  L   M ++ + PD   ++ALI+ ++K     EA  +   M    +      Y S
Sbjct: 61  WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++ G  +   + +A+ +   M  +G  PD +   +L+  + +   +D  +E+  EM  RG
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180

Query: 251 LLSGS 255
           +++ +
Sbjct: 181 IVANT 185



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 65/133 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C + + +D+K +L  M   G + + V  +TL++ Y KA      + +  EM 
Sbjct: 118 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 177

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I    VT+  LI G C+ G +  A D    M   G+ P+   +  ++ GLC K  + 
Sbjct: 178 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 237

Query: 133 RARNLFDEMPKRD 145
           +A  + +++ K +
Sbjct: 238 KAFAILEDLQKSE 250


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 127/276 (46%), Gaps = 36/276 (13%)

Query: 11  PLYGTIIW-GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           PL  +++  G C   +   ++ LL EM  +G+  N +   +L+DAY +  +      +L 
Sbjct: 67  PLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLK 126

Query: 70  EMLDSRIEVTVVTFCVLIDGL-----------------------------------CKSG 94
            M +  IE TV T+ +L+DGL                                   C++G
Sbjct: 127 VMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAG 186

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            VR A + F      G+ PN   Y ALI+G CK   +E A  L  +M  R +  +   + 
Sbjct: 187 NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFN 246

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +IDGY +     +AL +K  M ++G++LD+  Y +L  GL R   + EA+ L   MI +
Sbjct: 247 TMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK 306

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G+ P+ +   +L+  H   G+M EA  L  EM G G
Sbjct: 307 GVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 342



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 126/249 (50%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  I+ +   YG +I G C   + E +++L+++M+  G+  N ++  T++D Y +     
Sbjct: 200 GNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVD 259

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL +   M    IE+ V T+  L  GL ++  + EA +    M + G+ PN   YT LI
Sbjct: 260 KALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLI 319

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
              C +  +  AR LF EM      P    Y  ++DGY+K  S +EA   KN M + G+ 
Sbjct: 320 SIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLV 379

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ +Y +LV G    G +  A  LF EM  RG  P+ +   +L+    + G  +EA +L
Sbjct: 380 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 439

Query: 243 QNEMMGRGL 251
            + M+G GL
Sbjct: 440 YDNMLGDGL 448



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I+  +  Y  ++ GL         + +  EMK   L+ +    +++++AY +AG 
Sbjct: 128 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 187

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + DE + + IE    T+  LI+G CK G +  A      M   G+  N  V+  
Sbjct: 188 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 247

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG C+KN +++A  +   M K  +  D   Y  L  G  +     EA NL   M E G
Sbjct: 248 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 307

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +  +YT+L+      G + EAR LF EM G G  P  +    ++  + ++G++ EA 
Sbjct: 308 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAE 367

Query: 241 ELQNEMMGRGLL 252
             +NEM  +GL+
Sbjct: 368 RFKNEMEKKGLV 379



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 103/195 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ D+  Y T+  GL   ++ +++K LL  M E G+  N V  TTL+  +   G+
Sbjct: 268 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 327

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM  +  E ++VT+ V++DG  K G +REA  +   M   GL P++  Y A
Sbjct: 328 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 387

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    ++ A  LF+EM +R   P+  AYTALI G  K    +EA  L + M   G
Sbjct: 388 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 447

Query: 181 VDLDLNAYTSLVWGL 195
           +  D   Y++LV  L
Sbjct: 448 LTPDDALYSALVGSL 462



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 1/195 (0%)

Query: 58  AGEPSEALSLLDEMLDSRIE-VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           AG    A  LL +   S  + VT ++  V++DG CKSG V  A      MP  G+  N  
Sbjct: 44  AGHLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNAL 103

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y +L+D   ++   +R   +   M    + P    YT L+DG        +   +   M
Sbjct: 104 CYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEM 163

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
               +  D+  Y+S++    R G+++ A  +F E +G GI P+E    +L+    + G M
Sbjct: 164 KSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQM 223

Query: 237 DEAIELQNEMMGRGL 251
           + A  L  +M  RG+
Sbjct: 224 EAAEMLVTDMQVRGV 238


>gi|224077264|ref|XP_002305195.1| predicted protein [Populus trichocarpa]
 gi|222848159|gb|EEE85706.1| predicted protein [Populus trichocarpa]
          Length = 556

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  D   Y  I++          +  +  EM + G  AN+ + T+ + AY K   
Sbjct: 294 MLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEER 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM +  ++    TF  L++G  K+G V E + Y  +M + G  P+++ +  
Sbjct: 354 IEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMGHVPSLSAFNE 413

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LC+   + RA  +   +     + D   Y+ LI GY K+   +E L L   M    
Sbjct: 414 MVGKLCRIEDVTRANEMLTNLLDEGFLADEITYSNLISGYAKNNQIQEMLKLYYEMEYRS 473

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   L  +TSL+ GL  CG L+EA      MIGR + P E +  +L+K ++E+G+   A+
Sbjct: 474 LSPGLMGFTSLIKGLCNCGKLEEAEKYLRIMIGRSLNPREDVYEALIKVYFEKGDKRRAL 533

Query: 241 ELQNEMMGRGL 251
            L NEM+ +GL
Sbjct: 534 NLYNEMVSKGL 544



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++I  LC E K +    +L ++     +   ++ T L+    + G     L+LL  ML  
Sbjct: 238 SMISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRK 297

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            + +  V + +++    K G +  A+  +  M   G + N  VYT+ I   CK+  IE A
Sbjct: 298 NMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEA 357

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L  EM    + P    +  L++G  K    +E L+   +M E+G    L+A+  +V  
Sbjct: 358 NQLLQEMENMGLKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMGHVPSLSAFNEMVGK 417

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           L R   +  A  +   ++  G L DEI   +L+  + +   + E ++L  EM  R L  G
Sbjct: 418 LCRIEDVTRANEMLTNLLDEGFLADEITYSNLISGYAKNNQIQEMLKLYYEMEYRSLSPG 477



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 87/223 (39%), Gaps = 35/223 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +   A+  +Y + I   C E + E++  LL EM+  GL         L++   KAG 
Sbjct: 329 MLKRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMENMGLKPYGDTFNFLLEGCAKAGR 388

Query: 61  PSEALSLLDEMLD-----------------SRIEVTV------------------VTFCV 85
             E LS   +M++                  RIE                     +T+  
Sbjct: 389 VEETLSYCKKMMEMGHVPSLSAFNEMVGKLCRIEDVTRANEMLTNLLDEGFLADEITYSN 448

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G  K+  ++E +  +  M    L P +  +T+LI GLC    +E A      M  R 
Sbjct: 449 LISGYAKNNQIQEMLKLYYEMEYRSLSPGLMGFTSLIKGLCNCGKLEEAEKYLRIMIGRS 508

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + P    Y ALI  Y +    + ALNL N M   G+ L  + Y
Sbjct: 509 LNPREDVYEALIKVYFEKGDKRRALNLYNEMVSKGLKLCCSHY 551



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 96/215 (44%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           ++E+  T + +   TL+    K+ +   A  + + ML  R      T   +I  LCK G 
Sbjct: 189 LEEHRFTLSLISFNTLIHVVQKSDKSPLAWKIYEHMLHRRTYPNEATIESMISALCKEGK 248

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           ++  ++   ++      P V V T L+  + ++  +E    L   M +++MI DT AY+ 
Sbjct: 249 LQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRKNMILDTVAYSL 308

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           ++   +K  +   A+ +   M + G + +   YTS +    +   ++EA  L  EM   G
Sbjct: 309 IVYAKVKLGNLNSAMQVYEEMLKRGFNANSFVYTSFIGAYCKEERIEEANQLLQEMENMG 368

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + P       LL+   + G ++E +    +MM  G
Sbjct: 369 LKPYGDTFNFLLEGCAKAGRVEETLSYCKKMMEMG 403



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 94/211 (44%)

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           + ++ ++   L+ AY K         +   + + R  +++++F  LI  + KS     A 
Sbjct: 159 IISSPLVFDLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSLISFNTLIHVVQKSDKSPLAW 218

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
             +  M     +PN A   ++I  LCK+  ++   N+ D++  +   P     T L+   
Sbjct: 219 KIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRI 278

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           L+    +  L L   M    + LD  AY+ +V+   + G+L  A  ++ EM+ RG   + 
Sbjct: 279 LEEGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGNLNSAMQVYEEMLKRGFNANS 338

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +  S +  + +   ++EA +L  EM   GL
Sbjct: 339 FVYTSFIGAYCKEERIEEANQLLQEMENMGL 369



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 38/200 (19%), Positives = 87/200 (43%), Gaps = 3/200 (1%)

Query: 58  AGEPSEALSLLDEMLDSR--IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
            G+P++ L +LD +L S   I  + + F +L+    K  +     D   R+ +     ++
Sbjct: 140 VGDPTKFL-VLDSLLSSYKIIISSPLVFDLLVQAYAKQRMFEIGFDVCCRLEEHRFTLSL 198

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             +  LI  + K +    A  +++ M  R   P+     ++I    K    +  +N+ ++
Sbjct: 199 ISFNTLIHVVQKSDKSPLAWKIYEHMLHRRTYPNEATIESMISALCKEGKLQTIVNMLDK 258

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           +        +   T LV+ +   G ++    L   M+ + ++ D +    ++    + GN
Sbjct: 259 IHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRKNMILDTVAYSLIVYAKVKLGN 318

Query: 236 MDEAIELQNEMMGRGLLSGS 255
           ++ A+++  EM+ RG  + S
Sbjct: 319 LNSAMQVYEEMLKRGFNANS 338


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 126/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +Y TII G+C E   E +  +L+ M   GL  N V   TL+     A    E   LL
Sbjct: 296 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM D    +  VTF +L+D  C++GLV   I+   +M + G  P+V  YT +I+G CK+
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKE 415

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I+ A  L   M      P+T +YT ++ G    E + +A +L ++M + G  L+   +
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+  L + G +++A  L  +M+  G  PD I   +++    + G  DEA+EL N M+ 
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535

Query: 249 RGL 251
           +G+
Sbjct: 536 KGM 538



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 122/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ GLC   ++E+++ LL+EM +     + V    L+D + + G 
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL++ML+      V+T+  +I+G CK GL+ EA+     M   G  PN   YT 
Sbjct: 383 VDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC       A +L  +M ++    +   +  LI+   K    ++A+ L  +M   G
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL +Y++++ GL + G   EA  L + M+ +G+ P+ I+  S+       G +++ I
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 562

Query: 241 EL 242
           ++
Sbjct: 563 QM 564



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y  ++ GLC+  ++   + L+ EM       N V   TL+    + G       
Sbjct: 224 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 283

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L +M++      +  +  +IDG+CK G +  A +   RMP +GL PNV  Y  L+ GLC
Sbjct: 284 VLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLC 343

Query: 127 K----------------KNC-------------------IERARNLFDEMPKRDMIPDTT 151
                            K+C                   ++R   L ++M +R  +PD  
Sbjct: 344 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVI 403

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT +I+G+ K     EA+ L   MT  G   +  +YT ++ GL       +A  L  +M
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 463

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I +G   + I   +L+    ++G +++AIEL  +M+  G
Sbjct: 464 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 115/244 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NT+  T ++     A    +A  L+
Sbjct: 401 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 460

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+     +  +TF  LI+ LCK GLV +AI+   +M   G  P++  Y+ +IDGL K 
Sbjct: 461 SQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 520

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + A  L + M  + M P+T  Y+++     +     + + + + + +  +  D   Y
Sbjct: 521 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLY 580

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L + G  + A      M+  G +P+E     L++     G + EA E+  E+  
Sbjct: 581 NAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCS 640

Query: 249 RGLL 252
           +G L
Sbjct: 641 KGAL 644



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 107/217 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K +   Y  ++ GLC   ++ D++ L+S+M + G   N +   TL++   K G 
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL +ML +     ++++  +IDGL K+G   EA++    M + G+ PN  +Y++
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +   L ++  I +   +FD +    +  D   Y A+I    K    + A+     M   G
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
              + + YT L+ GL+  G ++EA+ +  E+  +G L
Sbjct: 608 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 6/245 (2%)

Query: 11  PLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           P+Y  I+   C    F  +  +L ++   G   +   C  +++A    G   EAL LL +
Sbjct: 158 PMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRD 217

Query: 71  MLDSRIEVTVVTFCVLIDGLCKS---GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           +     E  VV++  ++ GLC +   G V+E ++   RM      PN+  +  LI  LC+
Sbjct: 218 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM---ACPPNIVTFNTLISYLCR 274

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
               ER   +  +M +    PD   Y  +IDG  K    + A  + NRM   G+  ++  
Sbjct: 275 NGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVC 334

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y +L+ GL      +E   L  EM  +    D++    L+    + G +D  IEL  +M+
Sbjct: 335 YNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 394

Query: 248 GRGLL 252
            RG +
Sbjct: 395 ERGCM 399



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 107/237 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC   +  D+  +L EM   G      +   +++A  + G    A+ +L+++ 
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                + V    ++++ +C  G V EA+     +P FG  P+V  Y A++ GLC      
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 244

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + L +EM +    P+   +  LI    ++  F+    +  +M E G   D+  Y +++
Sbjct: 245 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATII 304

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            G+ + GHL+ A  + + M   G+ P+ +   +LLK        +E  EL  EM  +
Sbjct: 305 DGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK 361



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 11/205 (5%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
            ++  Y +AG+   A  L   +    +     T+  ++  LC  G + +A+     MP  
Sbjct: 95  AMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRR 151

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G  P   +Y  +++  C+      A  + +++  R    D      +++      S  EA
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEA 211

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGL---SRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           L+L   +   G + D+ +Y +++ GL    R G +QE   L  EM+ R   P  I+  + 
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE---LMEEMV-RMACPPNIVTFNT 267

Query: 227 LKKHYERGNMDEAI-ELQNEMMGRG 250
           L  +  R  + E + E+  +M+  G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEHG 292


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 125/239 (52%), Gaps = 1/239 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KGK I+AD+ +Y T+I  LC     +D+  L +EM   G+  +    ++L+      G  
Sbjct: 233 KGK-IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S+A  LL +ML+ +I   VVTF  LID   K G + EA   F  M    + PN+  Y +L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+G C  + ++ A+ +F  M  +D +PD   Y  LI+G+ K +   + + L   M+  G+
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +   YT+L+ G  +      A+++F +M+  G+ P+ +   +LL    + G +++A+
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 112/219 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ D+  Y ++I  LC   ++ D+  LLS+M E  +  N V   +L+DA+ K G+
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEM+   I+  +VT+  LI+G C    + EA   F  M      P+V  Y  
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +     LF +M +R ++ +T  YT LI G+ +      A  +  +M   G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  ++  Y +L+ GL + G L++A V+F  +    + PD
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 125/249 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T++ GL   +K  ++  L+  M   G   + V    +++   K GEP  AL+
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL++M   +IE  VV +  +ID LCK   V +A++ F  M + G+ P+V  Y++LI  LC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L  +M +R + P+   + +LID + K     EA  L + M +  +D ++ 
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y SL+ G      L EA+ +F  M+ +  LPD +   +L+    +   + + +EL  +M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406

Query: 247 MGRGLLSGS 255
             RGL+  +
Sbjct: 407 SRRGLVGNT 415



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 127/238 (53%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +++ G C  ++  ++  L+ +M E G   +TV  TTL+   F+  + SEA++L++ M+  
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
             +  +VT+  +I+GLCK G    A++   +M    +  +V +Y+ +ID LCK   ++ A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            NLF EM  + + PD   Y++LI     +  + +A  L + M E  ++ ++  + SL+  
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            ++ G L EA  LF EMI R I P+ +   SL+        +DEA ++   M+ +  L
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 125/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  +L  Y  +I  LC  S+   +  +L +M + G   + V   +L++ +      SEA+
Sbjct: 96  VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L+D+M++   +   VTF  L+ GL +     EA+    RM   G  P++  Y A+I+GL
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+   + A NL ++M K  +  D   Y+ +ID   K+    +ALNL   M   G+  D+
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+SL+  L   G   +A  L  +M+ R I P+ +   SL+    + G + EA +L +E
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335

Query: 246 MMGRGL 251
           M+ R +
Sbjct: 336 MIQRSI 341



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 125/248 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  + DL  YG +I GLC   + + +  LL++M++  + A+ VI +T++D+  K     +
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL+L  EM +  I   V T+  LI  LC  G   +A      M +  ++PNV  + +LID
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
              K+  +  A  LFDEM +R + P+   Y +LI+G+  H+   EA  +   M       
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y +L+ G  +   + +   LF +M  RG++ + +   +L+   ++  + D A  + 
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438

Query: 244 NEMMGRGL 251
            +M+  G+
Sbjct: 439 KQMVSDGV 446



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 102/211 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   D+  Y T+I G C   K  D   L  +M   GL  NTV  TTL+  +F+A +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+   +   ++T+  L+DGLCK+G + +A+  F  +    + P++  Y  
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           + +G+CK   +E   +LF  +  + + PD  AY  +I G+ K    +EA  L  +M E G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
              D   Y +L+    R G    +  L  EM
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 15/255 (5%)

Query: 12  LYGTIIWGLCIESKFEDSKLL--LSEMKEN-------------GLTANTVICTTLMDAYF 56
           L+G ++      S  E SKLL  +++MK+              G++ N      +++   
Sbjct: 52  LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           +  + S AL++L +M+      ++VT   L++G C    + EA+    +M + G  P+  
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +T L+ GL + N    A  L + M  +   PD   Y A+I+G  K      ALNL N+M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            +  ++ D+  Y++++  L +  H+ +A  LF EM  +GI PD     SL+      G  
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291

Query: 237 DEAIELQNEMMGRGL 251
            +A  L ++M+ R +
Sbjct: 292 SDASRLLSDMLERKI 306



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 109/227 (48%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +++  L  EM ++    + V  + L+ A  K  +    +S  ++M    +   + T+ 
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           ++I+ LC+   +  A+   G+M   G  P++    +L++G C  N I  A  L D+M + 
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PDT  +T L+ G  +H    EA+ L  RM   G   DL  Y +++ GL + G    A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L ++M    I  D ++  +++    +  ++D+A+ L  EM  +G+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 65/158 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y T++ GLC   K E + ++   ++++ +  +      + +   KAG+
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L   +    ++  V+ +  +I G CK GL  EA   F +M + G  P+   Y  
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           LI    +      +  L  EM       D + Y  + D
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598



 Score = 43.5 bits (101), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 45/87 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K D+  Y T+I G C +   E++  L  +MKE+G   ++    TL+ A+ + G+ + 
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           +  L+ EM   R      T+ ++ D L
Sbjct: 574 SAELIKEMRSCRFAGDASTYGLVTDML 600


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 122/240 (50%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC   + +++  LL  M+ +G+ A+ V   TL+     A E   AL LL EM 
Sbjct: 118 YTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMC 177

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S +   V+ +  L+ G C+SG  ++    F  M   G+ P+V ++T  ID LCKK  I 
Sbjct: 178 GSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIG 237

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + D M +R + P+   Y  LI+   K  S +EAL L+N M + GV  D+  Y +L+
Sbjct: 238 KAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLI 297

Query: 193 WGLSRCGHLQEARVLFHEMIGRGIL--PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GLS    +  A  L  EMI    L  PD +   S++    + G M +AI ++  M  RG
Sbjct: 298 AGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERG 357



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 125/253 (49%), Gaps = 2/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++AD+  YGT+I GLC  ++ + +  LL EM  +G+  N ++ + L+  Y ++G 
Sbjct: 141 MQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGR 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   + +EM    +E  V+ F   ID LCK G + +A+     M   GL PNV  Y  
Sbjct: 201 WQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNV 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE-- 178
           LI+ LCK+  +  A  L +EM  + + PD   Y  LI G         A+ L   M +  
Sbjct: 261 LINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGD 320

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             V+ D+  + S++ GL + G +++A  +   M  RG + + +    L+        ++ 
Sbjct: 321 TLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNM 380

Query: 239 AIELQNEMMGRGL 251
           A+ L +E++  GL
Sbjct: 381 AMNLMSELISSGL 393



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 5/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ ++  Y  +I  LC E    ++  L +EM + G+  + V   TL+       E
Sbjct: 246 MVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLE 305

Query: 61  PSEALSLLDEML--DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
              A+ LL+EM+  D+ +E  VVTF  +I GLCK G +R+AI     M + G   N+  Y
Sbjct: 306 MDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTY 365

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             LI G  + + +  A NL  E+    + PD+  Y+ LI+G+ K      A      MT+
Sbjct: 366 NYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQ 425

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-IGRGILPDEILCISLLKKHYERGNMD 237
            G+  +L  Y  L+  L + G +++A VLF+EM +  G+  D +   +++    + G++ 
Sbjct: 426 RGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGL--DAVAYSTMMYGACKSGDIK 483

Query: 238 EAIELQNEMMGRGL 251
            A +L  +M+  GL
Sbjct: 484 AAKQLLQDMLDEGL 497



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 4/239 (1%)

Query: 13  YGTIIWGLCIES-KFEDSKLLLSEMKENGLTA---NTVICTTLMDAYFKAGEPSEALSLL 68
           Y  ++  LC        +  LL++M      A   N V  T +M     +    EA++LL
Sbjct: 79  YNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALL 138

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M  S +   VVT+  LI GLC +  +  A++  G M   G+HPNV VY+ L+ G C+ 
Sbjct: 139 RSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRS 198

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              +    +F+EM +  + PD   +T  ID   K     +A+ +K+ M + G++ ++  Y
Sbjct: 199 GRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTY 258

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L+  L + G ++EA  L +EM  +G+ PD +   +L+        MD A+ L  EM+
Sbjct: 259 NVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMI 317



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 119/246 (48%), Gaps = 1/246 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  + ++I GLC   +   +  +   M E G   N V    L+  + +  + + A+
Sbjct: 323 VEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAM 382

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L+ E++ S +E    T+ +LI+G  K   V  A  +   M   G+   +  Y  L+  L
Sbjct: 383 NLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAAL 442

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   +E+A  LF+EM     + D  AY+ ++ G  K    K A  L   M + G+  D 
Sbjct: 443 CQLGMMEQAMVLFNEMDMNCGL-DAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDA 501

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+ L+   ++ G L+EA  +  +M   G +PD  +  SL+K +   G +++ ++L +E
Sbjct: 502 VTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHE 561

Query: 246 MMGRGL 251
           M  + +
Sbjct: 562 MRAKNV 567



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 3/198 (1%)

Query: 57  KAGEPSEALSLLDEM---LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
           + G+  +ALSLL +M            V++ +++ GLC S    EA+     M   G+  
Sbjct: 89  RGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRA 148

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           +V  Y  LI GLC    ++ A  L  EM    + P+   Y+ L+ GY +   +++   + 
Sbjct: 149 DVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVF 208

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
             M+ +GV+ D+  +T  +  L + G + +A  +   M+ RG+ P+ +    L+    + 
Sbjct: 209 EEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKE 268

Query: 234 GNMDEAIELQNEMMGRGL 251
           G++ EA+ L+NEM  +G+
Sbjct: 269 GSVREALALRNEMDDKGV 286



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 1/228 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    +L  Y  +I G     K   +  L+SE+  +GL  ++   + L++ + K  E
Sbjct: 353 MAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A   L  M    I   +  +  L+  LC+ G++ +A+  F  M D     +   Y+ 
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYST 471

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ G CK   I+ A+ L  +M    + PD   Y+ LI+ + K    +EA  +  +M   G
Sbjct: 472 MMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASG 531

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
              D+  + SL+ G S  G + +   L HEM  + +  D     +L++
Sbjct: 532 FVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTLVR 579


>gi|224576643|gb|ACN56995.1| At1g03560-like protein [Capsella grandiflora]
          Length = 196

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      G   N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCRXNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F          ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCRXNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDH--- 177

Query: 234 GNMDEAIELQNEMMGRGL 251
              +EA++L + M+ +G+
Sbjct: 178 -RNEEALKLWDMMIDKGI 194



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 1/179 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        +   +    +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCRXNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            L K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + G+
Sbjct: 136 ALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGI 194



 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 1/149 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NG   N+   ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRXNGXAINSXFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            LI G+ K +  E A  L+D M  + + P
Sbjct: 168 ILISGMFKDHRNEEALKLWDMMIDKGITP 196


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 129/247 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KN+  ++  + T++ GLC E K  ++K L++ M + G+  +      LMD YF   E  +
Sbjct: 253 KNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGK 312

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A ++ + M    +   V ++ V+I GL K  ++ EA+D F  M +  + P+V  Y++LID
Sbjct: 313 AKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLID 372

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   I  A    DEM  R   P+   YT+LID   K     +A+ L  ++ + G+  
Sbjct: 373 GLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQA 432

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y  LV GL + G L +A+ +F +++ +G   D +    ++    +    DEA+ L 
Sbjct: 433 NMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLL 492

Query: 244 NEMMGRG 250
           ++M  +G
Sbjct: 493 SKMEDKG 499



 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 130/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++G+  + D+ +Y TII GLC +    D+  L  EM E  +  N V  T+L+  +   G+
Sbjct: 180 IEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQ 239

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL+EM+   +   V TF  L+DGLCK G +REA      M   G+ P+V  Y A
Sbjct: 240 LDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNA 299

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG        +A+N+F+ M +  +  D  +Y+ +I G  K +   EA++L   M    
Sbjct: 300 LMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNEN 359

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+ AY+SL+ GL + G +  A     EM  RG  P+ I   SL+    +   +D+AI
Sbjct: 360 VIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAI 419

Query: 241 ELQNEMMGRGL 251
            L  ++  +G+
Sbjct: 420 ALLKKIKDQGI 430



 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 128/248 (51%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            + IK D   YGT+I GLC   +   +  LL +++      + V+  T++D   K     
Sbjct: 147 SQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVR 206

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L  EM + R+   VVT+  LI G C  G + +A      M    ++PNV  +  L+
Sbjct: 207 DAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLV 266

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK+  +  A++L   M K  + PD   Y AL+DGY   +   +A N+ N M ++GV 
Sbjct: 267 DGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVT 326

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+++Y+ ++ GLS+   L EA  LF  M    ++PD +   SL+    + G ++ A++ 
Sbjct: 327 CDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKY 386

Query: 243 QNEMMGRG 250
            +EM  RG
Sbjct: 387 VDEMHDRG 394



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 116/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G I+  L     +     L   M+ +G+ +N +    L+++Y    + + A S+  ++L
Sbjct: 52  FGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKIL 111

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +  ++T+  LI GLC +G V+E++++  R+   G+  +   Y  LI+GLCK     
Sbjct: 112 KLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTG 171

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  ++      PD   Y  +IDG  K +  ++A +L   M E  V  ++  YTSL+
Sbjct: 172 PALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLI 231

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +G    G L +A  L +EM+ + + P+     +L+    + G M EA  L   MM  G+
Sbjct: 232 YGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGV 290



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 97/178 (54%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N+  D+  Y ++I GLC   +   +   + EM + G   N +  T+L+DA  K+ +
Sbjct: 355 MRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQ 414

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++LL ++ D  I+  + T+ +L+DGLCK G + +A   F  +   G + +V  Y+ 
Sbjct: 415 VDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSI 474

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           +I+GLCK++  + A  L  +M  +  +PD  AY  +I+ + + +   +A  L   M +
Sbjct: 475 MINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 106/212 (50%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G   + +  TTL+      G+  E+L+  D ++   I++  V++  LI+GLCK G    A
Sbjct: 114 GYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPA 173

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    ++      P+V +Y  +IDGLCK   +  A +L+ EM ++ + P+   YT+LI G
Sbjct: 174 LRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYG 233

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +       +A  L N M    V+ ++  + +LV GL + G ++EA+ L   M+  G+ PD
Sbjct: 234 FCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPD 293

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                +L+  ++      +A  + N M   G+
Sbjct: 294 VFTYNALMDGYFLVKEAGKAKNVFNIMAQMGV 325



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 85/188 (45%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           ++A+   + ML  R    ++ F  ++  L K+      I  F RM   G+  N      L
Sbjct: 31  NDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNIL 90

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+  C    I  A ++F ++ K    PD   YT LI G   +   KE+LN  +R+   G+
Sbjct: 91  INSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGI 150

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            LD  +Y +L+ GL + G    A  L  ++ G    PD ++  +++    +   + +A +
Sbjct: 151 KLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFD 210

Query: 242 LQNEMMGR 249
           L  EM  +
Sbjct: 211 LYCEMFEK 218


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 126/276 (45%), Gaps = 36/276 (13%)

Query: 11  PLYGTIIW-GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           PL  +++  G C   + +D++ LL EM  +G+  N      L+D Y +    +    +L 
Sbjct: 133 PLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLK 192

Query: 70  EMLDSRIEVTVVTFCVLIDGL-----------------------------------CKSG 94
           EM    +E TV T+ +L+DGL                                   C++G
Sbjct: 193 EMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAG 252

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            VR A + F      G+ PN   Y ALI+G CK   IE A  L  +M  R +  +   + 
Sbjct: 253 NVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFN 312

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +IDGY +H    +AL +K  M  +G+ LD+  Y +L  GL R   +++A+ L H M   
Sbjct: 313 TMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTEN 372

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G+  + +   +L+  H + G+M EA  L  +M G+G
Sbjct: 373 GVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKG 408



 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/195 (38%), Positives = 104/195 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ D+  Y T+  GLC  ++ ED+K LL  M ENG+ +N V  TTL+  + K G+
Sbjct: 334 MERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGD 393

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  +M       +VVT+ V+IDG  KSG +REA  +   M   GL P+V  Y A
Sbjct: 394 MVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAA 453

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    ++ A  LF+EM +R   P+  AYTALI G  K    +EA    + M   G
Sbjct: 454 LVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAG 513

Query: 181 VDLDLNAYTSLVWGL 195
           +  D   Y+ LV  L
Sbjct: 514 LTPDDTLYSMLVGSL 528



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 122/249 (48%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  I+ +   YG +I G C   + E +++LL++M+  G+  N +I  T++D Y + G   
Sbjct: 266 GNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVD 325

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL +   M    I++ V T+  L  GLC+   + +A      M + G+  N   YT LI
Sbjct: 326 KALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLI 385

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
               K+  +  AR LF +M  +   P    Y  +IDGY+K  S +EA   K  M + G+ 
Sbjct: 386 SIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLV 445

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y +LV G    G +  A  LF EM  RG  P+ +   +L+    + G  +EA + 
Sbjct: 446 PDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQF 505

Query: 243 QNEMMGRGL 251
            + M+  GL
Sbjct: 506 YDNMLAAGL 514



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 120/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++  +  Y  ++ GL         + +  E+K   +  +    + +++AY +AG 
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + DE + + IE    T+  LI+G CK G +  A      M   G+  N  ++  
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG C+   +++A  +   M +  +  D   Y  L  G  +    ++A  L + MTE G
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ +  +YT+L+   S+ G + EAR LF +M G+G  P  +    ++  + + G++ EA 
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAE 433

Query: 241 ELQNEMMGRGLL 252
             + EM  +GL+
Sbjct: 434 RFKKEMEKKGLV 445



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 103/204 (50%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
            + ++D + KAG   +A  LLDEM    +++    +  L+D   +        +    M 
Sbjct: 136 ASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEME 195

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             G+ P V  YT L+DGL     I +  ++FDE+ ++++  D   Y+A+I+ Y +  + +
Sbjct: 196 SGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVR 255

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A  + +     G++ +   Y +L+ G  + G ++ A +L  +M  RG+  ++I+  +++
Sbjct: 256 RASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMI 315

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
             +   G +D+A+E++  M   G+
Sbjct: 316 DGYCRHGMVDKALEIKAVMERMGI 339


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 4/240 (1%)

Query: 16  IIWGLCIESKF-EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++ GLC   +  E   +LL  M E G T N V   TL+  +       EAL LL  M D 
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 75  RIEV---TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           ++      +V++  +I+G    G V +A + F  M D G+ PNV  YT +IDGLCK   +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +RA  +F +M  + + P+   YT LI GYL    +KE + +   M+  G++ D   Y  L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  L + G   EAR LF  MI +GI PD  +   +L  +  +G + E     + M+G G+
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK D+ +YG I+ G   +    +    L  M  NG++ N  I   +  A+ K   
Sbjct: 335 MIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAM 394

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + ++M    +   VV +  LID LCK G V +A   F +M + G+ PN+ V+T+
Sbjct: 395 IGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTS 454

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC  +  E+A  LF EM  + + P+   +  ++          +A  L + M  VG
Sbjct: 455 LVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVG 514

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ +Y +L+ G    G   EA  L   M+  G+ P+E    +LL  +   G +D+A 
Sbjct: 515 TRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAY 574

Query: 241 ELQNEMMGRGL 251
            +  EM+  G+
Sbjct: 575 SVFQEMLSNGI 585



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 137/312 (43%), Gaps = 73/312 (23%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTA---NTVICTTLMDAYFKAGEPSEALSLLD 69
           Y T++ G C E++ E++  LL  M +  + +   N V   T+++ +F  G+  +A +L  
Sbjct: 169 YNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFL 228

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI------- 122
           +M D  I   VVT+ ++IDGLCK+ +V  A   F +M D G+ PN+  YT LI       
Sbjct: 229 DMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIG 288

Query: 123 ----------------------------DGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
                                       D LCKK     AR LFD M ++ + PD + Y 
Sbjct: 289 QWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYG 348

Query: 155 ALIDGY-----------------------------------LKHESFKEALNLKNRMTEV 179
            ++ GY                                    K     EA+++ N+M + 
Sbjct: 349 IILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQ 408

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  ++  Y +L+  L + G + +A + F++MI  G+ P+ ++  SL+         ++A
Sbjct: 409 GLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKA 468

Query: 240 IELQNEMMGRGL 251
            EL  EM+ +G+
Sbjct: 469 GELFFEMVNQGI 480



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 120/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  +  ++  +      ++   ++  + ++M++ GL+ N V   TL+DA  K G 
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A    ++M++  +   +V F  L+ GLC      +A + F  M + G+HPNV  +  
Sbjct: 430 VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNT 489

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LC +  + +A+ L D M +    PD  +Y ALI G+       EA  L + M  VG
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG 549

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +L+ G  R G + +A  +F EM+  GI P  +   ++L   ++     EA 
Sbjct: 550 LKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAK 609

Query: 241 ELQNEMMGRG 250
           EL   M+  G
Sbjct: 610 ELYLNMITSG 619



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D   YG ++  LC + K  +++ L   M   G+  +  I   ++  Y   G 
Sbjct: 300 MSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGA 359

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SE  S LD M+ + I      F ++     K  ++ EA+D F +M   GL PNV  Y  
Sbjct: 360 LSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYAT 419

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++ A   F++M    + P+   +T+L+ G    + +++A  L   M   G
Sbjct: 420 LIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQG 479

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  + +++  L   G + +A+ L   M   G  PD I   +L++ H   G  DEA 
Sbjct: 480 IHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEAS 539

Query: 241 ELQNEMMGRGL 251
           +L + M+  GL
Sbjct: 540 KLLDIMLSVGL 550



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 115/239 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    + D+  Y  +I G C+  K +++  LL  M   GL  N     TL+  Y + G 
Sbjct: 510 MERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGR 569

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A S+  EML + I   VVT+  ++ GL K+    EA + +  M   G   ++  Y  
Sbjct: 570 IDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNI 629

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GL K NC++ A  +F  +  +D+  D   +  +I   LK    ++A+NL   ++  G
Sbjct: 630 ILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANG 689

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           +  D+  Y  +   L   G L+E   +F EM   G  P+ ++   L+++   RG++  A
Sbjct: 690 LVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRA 748



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 35/257 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y  +I GLC     + ++ +  +M + G+  N V  T L+  Y   G+
Sbjct: 230 MTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQ 289

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + +L EM    +E    T+ +L+D LCK G   EA   F  M   G+ P+V++Y  
Sbjct: 290 WKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGI 349

Query: 121 LIDG-----------------------------------LCKKNCIERARNLFDEMPKRD 145
           ++ G                                     KK  I  A ++F++M ++ 
Sbjct: 350 ILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQG 409

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+   Y  LID   K     +A    N+M   GV  ++  +TSLV+GL      ++A 
Sbjct: 410 LSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAG 469

Query: 206 VLFHEMIGRGILPDEIL 222
            LF EM+ +GI P+ + 
Sbjct: 470 ELFFEMVNQGIHPNVVF 486



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 109/252 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++ ++ ++++GLC   K+E +  L  EM   G+  N V   T+M      G 
Sbjct: 440 MINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGR 499

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+D M        ++++  LI G C  G   EA      M   GL PN   Y  
Sbjct: 500 VMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNT 559

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+   I+ A ++F EM    + P    Y  ++ G  K   F EA  L   M   G
Sbjct: 560 LLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSG 619

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  Y  ++ GLS+   + EA  +F  +  + +  D I    ++    + G  ++A+
Sbjct: 620 KQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAM 679

Query: 241 ELQNEMMGRGLL 252
            L   +   GL+
Sbjct: 680 NLFATISANGLV 691



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 111/255 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  + TI+  LC E +   ++ L+  M+  G   + +    L+  +   G+
Sbjct: 475 MVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGK 534

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LLD ML   ++    T+  L+ G C+ G + +A   F  M   G+ P V  Y  
Sbjct: 535 TDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNT 594

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GL K      A+ L+  M           Y  +++G  K+    EAL +   +    
Sbjct: 595 ILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKD 654

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + +D+  +  ++  L + G  ++A  LF  +   G++PD      + +   E G+++E  
Sbjct: 655 LQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFD 714

Query: 241 ELQNEMMGRGLLSGS 255
            + +EM   G    S
Sbjct: 715 GMFSEMEKSGCAPNS 729



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 82/188 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TI+ GL    +F ++K L   M  +G   +      +++   K     EAL +   + 
Sbjct: 592 YNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLC 651

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++V ++TF ++I  L K G   +A++ F  +   GL P+V  Y  + + L ++  +E
Sbjct: 652 SKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLE 711

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               +F EM K    P++     L+   L       A    +++ E    L+ +  + L+
Sbjct: 712 EFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLI 771

Query: 193 WGLSRCGH 200
              SR  H
Sbjct: 772 SLFSREEH 779


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 125/255 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +K D     T+++ LC   ++ED++ LL    + G   + V   T+M AYFK   
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P  AL L D+M++ ++  ++ T+  LI GLC+   ++EAID    + + GL P+   Y  
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNI 564

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   CK+  +E A    ++M +    PD      L++G   H    +AL L     E G
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +D+  Y +L+  + + G +  A   F +M  +G+ PD      +L    E G  +EA 
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684

Query: 241 ELQNEMMGRGLLSGS 255
            + +++   G LS S
Sbjct: 685 NMLHKLADSGKLSQS 699



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 36/283 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAG 59
           M     + DL  Y  +  GLC   K +++  L  EM+  +    + V   TL+DA FK  
Sbjct: 304 MTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWR 363

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             S+AL LL+EM D  ++ T+VT  +++  LCK G + EA+    ++ + GL P+V  Y 
Sbjct: 364 CSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYN 423

Query: 120 ALIDGLCKKNCIERARNLFDEM-----------------------------------PKR 144
            LID  CK   + +A  L DEM                                   P+R
Sbjct: 424 TLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQR 483

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
             +PD  +Y  ++  Y K  + + AL L ++M E  +   ++ Y +L+ GL R   L+EA
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
               +E++ +G++PDE     ++  + + G+++ A    N+M+
Sbjct: 544 IDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 124/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K  L  +  ++  LC E K E++   L ++ E GL  + +   TL+DAY KAG 
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A +L+DEM+   +++   T   ++  LCK     +A +     P  G  P+   Y  
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    K+   E A  L+D+M +R +IP  + Y  LI G  + E  KEA++  N + E G
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKG 554

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  ++    + G L+ A    ++M+     PD + C +L+      G +D+A+
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614

Query: 241 ELQNEMMGRG 250
           +L    + +G
Sbjct: 615 KLFESWVEKG 624



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++   C +    D+   LS M+  GL+ + V   TL++A+ + G   EA +LL  M 
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  T  T+  L+    + G +++A      M  +G  P++  Y  L  GLC+   ++
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVD 330

Query: 133 RARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            A  L DEM +    +PD   Y  L+D   K     +AL L   M + GV   L  +  +
Sbjct: 331 EAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           V  L + G L+EA     ++   G+ PD I   +L+  + + GN+ +A  L +EM+G+GL
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 127/290 (43%), Gaps = 36/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G  +  D   Y T++   C +    +++ LL+ MK +G+        TL+ A+ + G 
Sbjct: 234 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGW 293

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI---DYFGR------------ 105
             +A  +++ M     E  + T+ VL  GLC++G V EA    D   R            
Sbjct: 294 IKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYN 353

Query: 106 ---------------------MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
                                M D G+ P +  +  ++  LCK+  +E A    +++ + 
Sbjct: 354 TLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEE 413

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   Y  LID Y K  +  +A  L + M   G+ +D     ++++ L +    ++A
Sbjct: 414 GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDA 473

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             L H    RG +PDE+   +++  +++  N + A+ L ++M+ R L+  
Sbjct: 474 EELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 3/226 (1%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGE--PSEALSLLDEMLDSRIEVTVVTFCVL 86
           ++LL S  +  G+  +      ++ A  ++    P  +L +   +++ R+     TF +L
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           +   C  G + +A+     M  FGL P+   Y  L++  C+K  +  AR L   M +  +
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P    Y  L+  + +    K+A  +   MT  G + DL  Y  L  GL + G + EA  
Sbjct: 275 APTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFR 334

Query: 207 LFHEMIG-RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L  EM      LPD +   +L+   ++     +A+ L  EM  +G+
Sbjct: 335 LKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV 380



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 11/231 (4%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  D   Y  II   C E   E++    ++M EN    + V C TLM+     G+  +
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK 612

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L +  ++   +V V+T+  LI  +CK G V  A+ +F  M   GL P+   Y  ++ 
Sbjct: 613 ALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLS 672

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL------KHESFKEALNLKNRMT 177
            L +    E A N+  ++     +  + A   L           +HE   EA       +
Sbjct: 673 ALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEA-----ESS 727

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           E   D  L  Y   + GL   G L+EA+ +  EM+ +G+  D    I+L++
Sbjct: 728 EKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLME 778



 Score = 37.0 bits (84), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 13/136 (9%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTL-------MD 53
           M+ K ++ D   Y  ++  L    + E++  +L ++ ++G  + +  C  L        D
Sbjct: 655 MEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEAD 714

Query: 54  AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
                G+P    S  ++  D+ +E    T+   ++GLC  G ++EA      M   G+  
Sbjct: 715 VKEHEGKPEAESS--EKAQDNALE----TYMERLNGLCTGGQLKEAKAVLDEMMQKGMPV 768

Query: 114 NVAVYTALIDGLCKKN 129
           + + Y  L++GL K+ 
Sbjct: 769 DSSTYITLMEGLIKRQ 784


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 120/247 (48%), Gaps = 1/247 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D   +  ++ G C E +FE++  LL+ M   G   ++  CT ++ A+ + G      
Sbjct: 177 VRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVT 236

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L   M +      +V +   IDGLC+ G V++A      M   GL PNV  +T+LIDGL
Sbjct: 237 DLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296

Query: 126 CKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           CK   +ERA  LF ++ K     P+   YT +I GY K      A  L  RM E G+  +
Sbjct: 297 CKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 356

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
            N YT+L+ G  + G    A  L ++M   G LP+     +++    ++G + EA ++  
Sbjct: 357 TNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLR 416

Query: 245 EMMGRGL 251
               +GL
Sbjct: 417 MATSQGL 423



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 120/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K  + K ++  Y  +I G C E K   +++LL  M E GL  NT   TTL+  + K G 
Sbjct: 313 VKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGS 372

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+++M        + T+  +I G CK G ++EA          GLH +   YT 
Sbjct: 373 FDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTI 432

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   CK+  I  A +LF +M ++   PD   YT +I  Y +    +++  L ++   +G
Sbjct: 433 LITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIG 492

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTS++ G  R G L  A  +F  M+  G LPD I   +L+    +   ++EA 
Sbjct: 493 LVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEAR 552

Query: 241 ELQNEMMGRGLL 252
            L   M+ + L+
Sbjct: 553 ALFETMLDKHLV 564



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 117/294 (39%), Gaps = 44/294 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    ++  Y  II G C + K +++  +L      GL  + V  T L+  + K G 
Sbjct: 383 MKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGH 442

Query: 61  PSEALSLLDEML------DSRIEVTVV-----------------------------TFCV 85
            + AL L  +M       D     T++                             T+  
Sbjct: 443 ITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTS 502

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I G C+ G +  A+  F RM   G  P+   Y ALI  LCK++ +E AR LF+ M  + 
Sbjct: 503 MIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKH 562

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT--SLVWGLSRCGHLQE 203
           ++P       L   Y + +    A++  +R+     D    A+T  +LV  LS  G+L  
Sbjct: 563 LVPCDVTRVTLAYEYCRRDKITIAVSFLDRL-----DKRQQAHTADALVRKLSTVGNLDA 617

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
           A +    ++ +    D     S +   YE      A E+  ++  R  +SG K 
Sbjct: 618 ASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISKR--ISGFKK 669



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 5/190 (2%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTF-CVLIDGLCKSGL---VREAIDYFGRMPDFGLH 112
           +AG   EA  +L E+    + + V T   VL  GL   G     REA D   R    G+ 
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAG-GVR 178

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P+   + AL+ G C++   E A  L   M  +    D+   T ++  + +   F+   +L
Sbjct: 179 PDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDL 238

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
             RM+E+G   ++  Y++ + GL   G++++A  +  EM+G+G+ P+     SL+    +
Sbjct: 239 FRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298

Query: 233 RGNMDEAIEL 242
            G M+ A  L
Sbjct: 299 IGWMERAFRL 308


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 127/255 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N + +   Y  +I G         +  LLS+M E+ LT + V   +L+    KAG 
Sbjct: 415 MESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGH 474

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LLD + ++ +     T+ V ID LCKS  + EA D F  + + G+  N  +YTA
Sbjct: 475 FDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTA 534

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   I+ A +L + M   D +P+++ Y +LI G  K    +E L++   M+++G
Sbjct: 535 LIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMG 594

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V   +  YT L+  + R G    A  +F++M+  G  PD     + +  +   GN+ EA 
Sbjct: 595 VKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAE 654

Query: 241 ELQNEMMGRGLLSGS 255
            +   M+  G++  S
Sbjct: 655 GMMARMIEAGVMPDS 669



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 2/246 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +   L  Y ++I   C    F+ +  LL  +KENGL  +    +  +D   K+    EA 
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEAC 514

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L + + +  I+   V +  LIDG CK+G + EAI    RM      PN + Y +LI G+
Sbjct: 515 DLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGV 574

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  ++   ++ + M K  + P    YT LI+  L+   F  A  + N+M   G   D+
Sbjct: 575 CKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDV 634

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER-GNMDEAIELQN 244
             YT+ +      G+++EA  +   MI  G++PD  L  +LL   YER G   +A  +  
Sbjct: 635 YTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDS-LTYTLLISAYERLGLAYDAFNVLK 693

Query: 245 EMMGRG 250
            M+  G
Sbjct: 694 RMLDAG 699



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 109/227 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K   +  D   Y   I  LC   + E++  L + +KE G+ AN V+ T L+D + KAG+
Sbjct: 485 LKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGK 544

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+SLL+ M          T+  LI G+CK G V+E +     M   G+ P VA YT 
Sbjct: 545 IDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTI 604

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+ + ++   + A  +F++M      PD   YTA I  Y    + KEA  +  RM E G
Sbjct: 605 LIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAG 664

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           V  D   YT L+    R G   +A  +   M+  G  P   +  +L+
Sbjct: 665 VMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 122/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +   +  Y  +I G C E + E +  +L  M+ N    N      L+  + K   
Sbjct: 380 MMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKH 439

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++LL +ML+S++  ++VT+  LI   CK+G    A      + + GL P+   Y+ 
Sbjct: 440 VHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSV 499

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            ID LCK   +E A +LF+ + ++ +  +   YTALIDG+ K     EA++L  RM    
Sbjct: 500 FIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSED 559

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              + + Y SL++G+ + G +QE   +   M   G+ P       L+++    G+ D A 
Sbjct: 560 CLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHAN 619

Query: 241 ELQNEMMGRG 250
            + N+M+  G
Sbjct: 620 RVFNQMVSFG 629



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 113/240 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I G C  +    +  + + M   G   N V  TT++    +AG   E +SL  +M 
Sbjct: 252 YTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMR 311

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +     TV T+ V+I  L  +    E +D F  M +    PNV  YT ++D +CK+  ++
Sbjct: 312 EDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLD 371

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            +R + +EM ++ ++P    Y ALI GY +    + AL +   M       +   Y  L+
Sbjct: 372 ESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELI 431

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G S+  H+ +A  L  +M+   + P  +   SL+    + G+ D A +L + +   GL+
Sbjct: 432 CGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLV 491



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 115/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + +   Y TII GLC   + ++   L  +M+E+         T ++ A F    
Sbjct: 275 MPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDR 334

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L +EM +   E  V T+ V++D +CK   + E+      M + GL P+V  Y A
Sbjct: 335 NLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNA 394

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C++  IE A  +   M   +  P+   Y  LI G+ K +   +A+ L ++M E  
Sbjct: 395 LIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESK 454

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   L  Y SL+    + GH   A  L   +   G++PD+      +    +   M+EA 
Sbjct: 455 LTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEAC 514

Query: 241 ELQNEMMGRGL 251
           +L N +  +G+
Sbjct: 515 DLFNSLKEKGI 525



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 113/243 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II  L    +  +   L +EM+E     N    T ++DA  K  +  E+  +L+EM+
Sbjct: 322 YTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMM 381

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +  +VVT+  LI G C+ G +  A++  G M      PN   Y  LI G  K+  + 
Sbjct: 382 EKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVH 441

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L  +M +  + P    Y +LI    K   F  A  L + + E G+  D   Y+  +
Sbjct: 442 KAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFI 501

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L +   ++EA  LF+ +  +GI  +E++  +L+  H + G +DEAI L   M     L
Sbjct: 502 DTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCL 561

Query: 253 SGS 255
             S
Sbjct: 562 PNS 564



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 110/216 (50%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           ++ K + +EM  + +  N     T+++AY K G   EA   + ++  + +     T+  L
Sbjct: 196 DEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSL 255

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I G C++  V  A   F  MP+ G   N   YT +I GLC+   I+   +LF +M + D 
Sbjct: 256 ILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDC 315

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P    YT +I     ++   E ++L N M E   + +++ YT +V  + +   L E+R 
Sbjct: 316 YPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRR 375

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           + +EM+ +G++P  +   +L++ + E G ++ A+E+
Sbjct: 376 ILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEI 411



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K IKA+  +Y  +I G C   K +++  LL  M       N+    +L+    K G+
Sbjct: 520 LKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGK 579

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E LS+++ M    ++ TV T+ +LI+ + + G    A   F +M  FG  P+V  YTA
Sbjct: 580 VQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTA 639

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I   C    ++ A  +   M +  ++PD+  YT LI  Y +     +A N+  RM + G
Sbjct: 640 FIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAG 699

Query: 181 VDLDLNAYTSLVW 193
            D     + +L+W
Sbjct: 700 CDPSHPIWNNLIW 712



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 77/178 (43%)

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D + +++V ++  L+  L +  ++ E    +  M +  + PN+     +++   K   I 
Sbjct: 172 DIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIV 231

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A     ++ +  + PD+  YT+LI GY ++     A  + N M   G   +  +YT+++
Sbjct: 232 EANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTII 291

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL   G + E   LF +M      P       ++   +      E ++L NEM  R 
Sbjct: 292 HGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERS 349


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 127/276 (46%), Gaps = 36/276 (13%)

Query: 11  PLYGTIIW-GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           PL  +++  G C   +   ++ LL EM  +G+  N +   +L+DAY +  +      +L 
Sbjct: 143 PLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLK 202

Query: 70  EMLDSRIEVTVVTFCVLIDGL-----------------------------------CKSG 94
            M +  IE TV T+ +L+DGL                                   C++G
Sbjct: 203 VMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAG 262

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            VR A + F      G+ PN   Y ALI+G CK   +E A  L  +M  R +  +   + 
Sbjct: 263 NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFN 322

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +IDGY +     +AL +K  M ++G++LD+  Y +L  GL R   + EA+ L   MI +
Sbjct: 323 TMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G+ P+ +   +L+  H   G+M EA  L  EM G G
Sbjct: 383 GVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 125/249 (50%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  I+ +   YG +I G C   + E +++L+++M+  G+  N ++  T++D Y +     
Sbjct: 276 GNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVD 335

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL +   M    IE+ V T+  L  GL ++  + EA +    M + G+ PN   YT LI
Sbjct: 336 KALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLI 395

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
              C +  +  AR LF EM      P    Y  ++DGY+K  S +EA   K  M + G+ 
Sbjct: 396 SIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLV 455

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ +Y +LV G    G +  A  LF EM  RG  P+ +   +L+    + G  +EA +L
Sbjct: 456 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 515

Query: 243 QNEMMGRGL 251
            + M+G GL
Sbjct: 516 YDNMLGDGL 524



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 103/195 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ D+  Y T+  GL   ++ +++K LL  M E G+  N V  TTL+  +   G+
Sbjct: 344 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 403

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM  +  E ++VT+ V++DG  K G +REA  +   M   GL P++  Y A
Sbjct: 404 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAA 463

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    ++ A  LF+EM +R   P+  AYTALI G  K    +EA  L + M   G
Sbjct: 464 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 523

Query: 181 VDLDLNAYTSLVWGL 195
           +  D   Y++LV  L
Sbjct: 524 LTPDDALYSALVGSL 538



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 120/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I+  +  Y  ++ GL         + +  EMK   L+ +    +++++AY +AG 
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + DE + + IE    T+  LI+G CK G +  A      M   G+  N  V+  
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG C+KN +++A  +   M K  +  D   Y  L  G  +     EA NL   M E G
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +  +YT+L+      G + EAR LF EM G G  P  +    ++  + ++G++ EA 
Sbjct: 384 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAE 443

Query: 241 ELQNEMMGRGLL 252
             + EM  +GL+
Sbjct: 444 RFKKEMEKKGLV 455



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 80/174 (45%)

Query: 78  VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNL 137
           VT ++  V++DG CKSG V  A      MP  G+  N   Y +L+D   ++   +R   +
Sbjct: 141 VTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEM 200

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSR 197
              M    + P    YT L+DG        +   +   M    +  D+  Y+S++    R
Sbjct: 201 LKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCR 260

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G+++ A  +F E +G GI P+E    +L+    + G M+ A  L  +M  RG+
Sbjct: 261 AGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGV 314


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    D+  Y  ++ G+C E + +++   L++M  +G   N +    ++ +    G 
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL +ML      +VVTF +LI+ LC+ GL+  AID   +MP  G  PN   Y  
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK+  ++RA    + M  R   PD   Y  ++    K    ++A+ + N+++  G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L  Y +++ GL++ G   +A  L  EM  + + PD I   SL+      G +DEAI
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504

Query: 241 ELQNEMMGRGL 251
           +  +E    G+
Sbjct: 505 KFFHEFERMGI 515



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 35/282 (12%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  Y TI+  LC   K + +  +L  M +     + +  T L++A  +      A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN---------- 114
           + LLDEM D      VVT+ VL++G+CK G + EAI +   MP  G  PN          
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318

Query: 115 -------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
                                    V  +  LI+ LC+K  + RA ++ ++MP+    P+
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
           + +Y  L+ G+ K +    A+    RM   G   D+  Y +++  L + G +++A  + +
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           ++  +G  P  I   +++    + G   +AI+L +EM  + L
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 3/236 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T+I G C   K   +  +L  ++ +G   + +    ++  Y KAGE + ALS+LD M   
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM--- 198

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +   VVT+  ++  LC SG +++A++   RM     +P+V  YT LI+  C+ + +  A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L DEM  R   PD   Y  L++G  K     EA+   N M   G   ++  +  ++  
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +   G   +A  L  +M+ +G  P  +    L+     +G +  AI++  +M   G
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 116/252 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K     +  +  +I  LC +     +  +L +M ++G   N++    L+  + K  +   
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+  L+ M+       +VT+  ++  LCK G V +A++   ++   G  P +  Y  +ID
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K     +A  L DEM  +D+ PDT  Y++L+ G  +     EA+   +    +G+  
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   + S++ GL +      A      MI RG  P+E     L++     G   EA+EL 
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577

Query: 244 NEMMGRGLLSGS 255
           NE+  +GL+  S
Sbjct: 578 NELCNKGLMKKS 589



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 3/227 (1%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + E+    L  M  +G   + + CTTL+  + + G+  +A  +L+ +  S     V+T+ 
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+I G CK+G +  A+    RM    + P+V  Y  ++  LC    +++A  + D M +R
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           D  PD   YT LI+   +      A+ L + M + G   D+  Y  LV G+ + G L EA
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               ++M   G  P+ I    +L+     G   +A +L  +M+ +G 
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 3/250 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++G     D+  Y  +I G C   +  ++  +L  M    ++ + V   T++ +   +G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGK 219

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +LD ML       V+T+ +LI+  C+   V  A+     M D G  P+V  Y  
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G+CK+  ++ A    ++MP     P+   +  ++        + +A  L   M   G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  +  L+  L R G L  A  +  +M   G  P+ +    LL    +   MD AI
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 241 ELQNEMMGRG 250
           E    M+ RG
Sbjct: 400 EYLERMVSRG 409



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 3/194 (1%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           + GE  E    L+ M+       ++    LI G C+ G  R+A      +   G  P+V 
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y  +I G CK   I  A ++ D M    + PD   Y  ++         K+A+ + +RM
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            +     D+  YT L+    R   +  A  L  EM  RG  PD +    L+    + G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 237 DEAIELQNEMMGRG 250
           DEAI+  N+M   G
Sbjct: 291 DEAIKFLNDMPSSG 304



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 35/187 (18%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y T++  LC + K ED+  +L+++   G +   +   T++D   KAG+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV--- 117
             +A+ LLDEM    ++   +T+  L+ GL + G V EAI +F      G+ PN      
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524

Query: 118 --------------------------------YTALIDGLCKKNCIERARNLFDEMPKRD 145
                                           YT LI+GL  +   + A  L +E+  + 
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584

Query: 146 MIPDTTA 152
           ++  ++A
Sbjct: 585 LMKKSSA 591



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 3/161 (1%)

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           + ++G + E   +   M   G  P++   T LI G C+     +A  + + +     +PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  +I GY K      AL++ +RM+   V  D+  Y +++  L   G L++A  +  
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            M+ R   PD I    L++       +  A++L +EM  RG
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  125 bits (313), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y +II  LC     + +  +L+ M +NG+  N +   +++  Y  + +
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L+D LCK+G   EA   F  M   GL P++A Y  
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + PD   +  LI  Y K E   EA+ + ++M + G
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y +++  L + G + +A + F +MI  G+ P+ I+  SL+         D+A 
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAE 461

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 462 ELILEMLDRGI 472



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y T++ G   +    +   LL  M  NG+  +  +   L+ AY K  +
Sbjct: 327 MTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEK 386

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  +M    +   VVT+  +I  LCKSG V +A+ YF +M D GL PN+ VYT+
Sbjct: 387 VDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 446

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC  +  ++A  L  EM  R +  +T  + ++I  + K     E+  L + M  +G
Sbjct: 447 LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y++L+ G    G + EA  L   M   G+ PD +   +L+  +     MD+A+
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566

Query: 241 ELQNEMMGRGL 251
            L  EM+  G+
Sbjct: 567 ALFKEMVSSGV 577



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 122/239 (51%), Gaps = 3/239 (1%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKEN---GLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           ++ GLC E++ +++  LL  M ++   G   + V  TT+++ +FK G+  +A S   EML
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D RI   VVT+  +I  LCK   + +A++    M   G+ PN   Y +++ G C     +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A     +M    + PD   Y +L+D   K+    EA  + + MT+ G++ D+  Y +L+
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G +  G L E   L   M+  GI PD  +   L+  + ++  +DEA+ + ++M   GL
Sbjct: 344 QGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y +++  LC   +  +++ +   M + GL  +     TL+  Y   G 
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  +LLD M+ + I      F +LI    K   V EA+  F +M   GL+PNV  Y A
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK   ++ A   F++M    + P+   YT+LI      + + +A  L   M + G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   + S++    + G + E+  LF  M+  G+ P+ I   +L+  +   G MDEA 
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531

Query: 241 ELQNEMMGRGL 251
           +L + M   G+
Sbjct: 532 KLLSSMFSVGM 542



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 97/208 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  ++  YG +I  LC     +D+ L   +M + GLT N ++ T+L+ +     +
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EMLD  I +  + F  +I   CK G V E+   F  M   G+ PNV  Y+ 
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L   M    M PD   Y  LI+GY +     +AL L   M   G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  ++  Y  ++ GL        A+ L+
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELY 604



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 105/211 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++ +Y ++I  LCI  K++ ++ L+ EM + G+  NT+   +++ ++ K G 
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGR 491

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  L D M+   ++  V+T+  LIDG C +G + EA      M   G+ P+   Y  
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+ + ++ A  LF EM    + P+   Y  ++ G         A  L   +T+ G
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             L+L+ Y  ++ GL +     EA  +F  +
Sbjct: 612 TQLELSTYNIILHGLCKNNLTDEALRMFQNL 642



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 95/208 (45%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            + +II   C E +  +S+ L   M   G+  N +  +TL+D Y  AG+  EA  LL  M
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               ++   VT+  LI+G C+   + +A+  F  M   G+ PN+  Y  ++ GL      
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A+ L+  + K     + + Y  ++ G  K+    EAL +   +    + L+   +  +
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  L + G   EA+ LF      G++P+
Sbjct: 658 IGALLKVGRNDEAKDLFVAFSSNGLVPN 685



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 108/234 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K ++  Y T+I G C+  K +++  LLS M   G+  + V   TL++ Y +     +AL
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM+ S +   ++T+ +++ GL  +     A + +  +   G    ++ Y  ++ GL
Sbjct: 567 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N  + A  +F  +   D+  +T  +  +I   LK     EA +L    +  G+  + 
Sbjct: 627 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNY 686

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y  +   +   G L+E   LF  M   G   D  +   ++++  +RG +  A
Sbjct: 687 WTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 7/200 (3%)

Query: 60  EPSEALSLLDEMLDS---RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
            P+ A+S  + M  +   ++  TV T+ +LI   C++G +       G +   G      
Sbjct: 64  SPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAI 123

Query: 117 VYTALIDGLCKKNCIERARNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
            +T L+ GLC       A ++    M +   +PD  + T L+ G       +EAL L + 
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 183

Query: 176 MTE---VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
           M +    G   D+ +YT+++ G  + G   +A   +HEM+ R I PD +   S++    +
Sbjct: 184 MADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243

Query: 233 RGNMDEAIELQNEMMGRGLL 252
              MD+A+E+   M+  G++
Sbjct: 244 GQAMDKAMEVLTTMVKNGVM 263


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GL  + +  D   LLS ++E G  AN    +TL+   FK  +  EA+ L  +M+
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 390

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +  +V +  LIDGLC+ G + EA +    M + G  PN   Y++LI G  K    +
Sbjct: 391 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 450

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  ++ EM K + +P+   Y+ LI G  +    +EA+ +   M   G+  D+ AY+S++
Sbjct: 451 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 510

Query: 193 WGLSRCGHLQEARVLFHEMIGR--GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL   G ++    LF+EM+ +     PD +    LL+   ++ ++  AI+L N M+ RG
Sbjct: 511 HGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 570



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 123/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + D+  Y T++ GLC E + +++ LLL EM+  G   ++V    L++   K G+
Sbjct: 214 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 273

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 L+D M         VT+  +I+GLC  G + +A+    RM      PN   Y  
Sbjct: 274 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 333

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GL K+       +L   + +R    +  AY+ LI G  K E  +EA+ L  +M E G
Sbjct: 334 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 393

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y++L+ GL R G L EA+ +  EM+ +G  P+     SL+K  ++ GN  +AI
Sbjct: 394 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 453

Query: 241 ELQNEM 246
            +  EM
Sbjct: 454 RVWKEM 459



 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 123/235 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII GLC++ K + +  LL  M  +    N V   TL++   K G   + + LL  + 
Sbjct: 296 YNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 355

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +         +  LI GL K     EA+  + +M + G  PN+ VY+ALIDGLC++  ++
Sbjct: 356 ERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 415

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +  EM  +   P+   Y++LI G+ K  + ++A+ +   M +     +   Y+ L+
Sbjct: 416 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 475

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            GL   G L+EA +++  M+GRG+ PD +   S++      G+++  ++L NEM+
Sbjct: 476 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 3/217 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + ++ +Y  +I GLC E K +++K +L EM   G T N    ++L+  +FK G 
Sbjct: 389 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 448

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  EM  +      + + VLI GLC+ G +REA+  +  M   GL P+V  Y++
Sbjct: 449 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 508

Query: 121 LIDGLCKKNCIERARNLFDEM--PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           +I GLC    +E    LF+EM   + D  PD   Y  L+    K  S   A++L N M +
Sbjct: 509 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 568

Query: 179 VGVDLDLNAYTSLVWGL-SRCGHLQEARVLFHEMIGR 214
            G + DL      +  L  +    Q+ R    E++ R
Sbjct: 569 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR 605



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 35/248 (14%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           +  ++ N +    ++ A  K G    A+ +  EM   + E  V T+C L+DGLCK   + 
Sbjct: 181 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 240

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCK----------------KNCI---------- 131
           EA+     M   G  P+   +  LI+GLCK                K C+          
Sbjct: 241 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 300

Query: 132 ---------ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
                    ++A +L D M     +P+   Y  LI+G +K     + ++L + + E G  
Sbjct: 301 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 360

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +  AY++L+ GL +    +EA  L+ +M+ +G  P+ ++  +L+      G +DEA E+
Sbjct: 361 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 420

Query: 243 QNEMMGRG 250
             EM+ +G
Sbjct: 421 LCEMVNKG 428



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 38/237 (16%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD- 108
           +L++ Y  +G+      + D M   R       F ++     K+ L  +AI+ FGRM D 
Sbjct: 85  SLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDE 144

Query: 109 -------------------------------------FGLHPNVAVYTALIDGLCKKNCI 131
                                                  + PNV  +  +I  +CK   +
Sbjct: 145 FQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLV 204

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +RA  +F EM  +   PD   Y  L+DG  K +   EA+ L + M   G       +  L
Sbjct: 205 DRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVL 264

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + GL + G +     L   M  +G +P+E+   +++     +G +D+A+ L + M+ 
Sbjct: 265 INGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 321


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 127/276 (46%), Gaps = 36/276 (13%)

Query: 11  PLYGTIIW-GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           PL  +++  G C   +   ++ LL EM  +G+  N +   +L+DAY +  +      +L 
Sbjct: 143 PLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLK 202

Query: 70  EMLDSRIEVTVVTFCVLIDGL-----------------------------------CKSG 94
            M +  IE TV T+ +L+DGL                                   C++G
Sbjct: 203 VMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAG 262

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            VR A + F      G+ PN   Y ALI+G CK   +E A  L  +M  R +  +   + 
Sbjct: 263 NVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFN 322

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            +IDGY +     +AL +K  M ++G++LD+  Y +L  GL R   + EA+ L   MI +
Sbjct: 323 TMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEK 382

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G+ P+ +   +L+  H   G+M EA  L  EM G G
Sbjct: 383 GVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNG 418



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 126/249 (50%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  I+ +   YG +I G C   + E +++L+++M+  G+  N ++  T++D Y +     
Sbjct: 276 GNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVD 335

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL +   M    IE+ V T+  L  GL ++  + EA +    M + G+ PN   YT LI
Sbjct: 336 KALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLI 395

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
              C +  +  AR LF EM      P    Y  ++DGY+K  S +EA   KN M + G+ 
Sbjct: 396 SIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLV 455

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+ +Y +LV G    G +  A  LF EM  RG  P+ +   +L+    + G  +EA +L
Sbjct: 456 PDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQL 515

Query: 243 QNEMMGRGL 251
            + M+G GL
Sbjct: 516 YDNMLGDGL 524



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I+  +  Y  ++ GL         + +  EMK   L+ +    +++++AY +AG 
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + DE + + IE    T+  LI+G CK G +  A      M   G+  N  V+  
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG C+KN +++A  +   M K  +  D   Y  L  G  +     EA NL   M E G
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +  +YT+L+      G + EAR LF EM G G  P  +    ++  + ++G++ EA 
Sbjct: 384 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAE 443

Query: 241 ELQNEMMGRGLL 252
             +NEM  +GL+
Sbjct: 444 RFKNEMEKKGLV 455



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 103/195 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ D+  Y T+  GL   ++ +++K LL  M E G+  N V  TTL+  +   G+
Sbjct: 344 MEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 403

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM  +  E ++VT+ V++DG  K G +REA  +   M   GL P++  Y A
Sbjct: 404 MVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAA 463

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    ++ A  LF+EM +R   P+  AYTALI G  K    +EA  L + M   G
Sbjct: 464 LVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDG 523

Query: 181 VDLDLNAYTSLVWGL 195
           +  D   Y++LV  L
Sbjct: 524 LTPDDALYSALVGSL 538



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 80/174 (45%)

Query: 78  VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNL 137
           VT ++  V++DG CKSG V  A      MP  G+  N   Y +L+D   ++   +R   +
Sbjct: 141 VTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEM 200

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSR 197
              M    + P    YT L+DG        +   +   M    +  D+  Y+S++    R
Sbjct: 201 LKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCR 260

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G+++ A  +F E +G GI P+E    +L+    + G M+ A  L  +M  RG+
Sbjct: 261 AGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGV 314


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y T++ G   +    +   LL  M  NG+  +  +   L+ AY K  +
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 391

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  +M    +   VV +  +ID LCKSG V +A+ YF +M D GL PN+ VYT+
Sbjct: 392 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 451

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC  +  ++A  L  EM  R +  +T  + ++ID + K     E+  L + M  +G
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y +L+ G    G + EA  L   M+  G+ PD +   +L+  +     MD+A+
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 241 ELQNEMMGRGL 251
            L  EM+  G+
Sbjct: 572 ALFKEMVSSGV 582



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y +II  LC     + +  +L+ M +NG+  + +   +++  Y  +G+
Sbjct: 227 MLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L++ LCK+G   EA   F  M   GL P++A Y  
Sbjct: 287 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 346

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + PD   +  LI  Y K E   +A+ + ++M + G
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 406

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y +++  L + G + +A + F +MI  G+ P+ I+  SL+         D+A 
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAE 466

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 467 ELILEMLDRGI 477



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 124/250 (49%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G     D+  Y T++ G   E   + +     EM + G+  + V  ++++ A  KA   
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +A+ +L+ M+ + +    +T+  ++ G C SG  +EAI    +M   G+ PNV  Y++L
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++ LCK      AR +FD M KR + PD   Y  L+ GY    +  E   L + M   G+
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D + +  L+   ++   + +A ++F +M   G+ P+ +   +++    + G++D+A+ 
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 242 LQNEMMGRGL 251
              +M+  GL
Sbjct: 433 YFEQMIDEGL 442



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 135/292 (46%), Gaps = 37/292 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++ +Y ++I GLC   K++ ++ L+ EM + G+  NT+   +++D++ K G 
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  L D M+   ++  ++T+  LIDG C +G + EA      M   G+ P++  Y  
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+ + ++ A  LF EM    + P+   Y  ++ G         A  L   +T+ G
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616

Query: 181 VDLDLNAYTSLVWGLS-----------------------------------RCGHLQEAR 205
             L+L+ Y  ++ GL                                    +CG + EA+
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676

Query: 206 VLFHEMIGRGILPDEILCISLLKKH-YERGNMDEAIELQNEMMGRGLLSGSK 256
            LF      G++PD +   SL+ ++  E+G+++E  +L   M   G  + S+
Sbjct: 677 DLFAAHSANGLVPD-VRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSR 727



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ ++  Y +++  LC   +  +++ +   M + GL  +     TL+  Y   G 
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  +LLD M+ + I+     F +LI    K   V +A+  F +M   GL+PNV  Y  
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   ++ A   F++M    + P+   YT+LI G    + + +A  L   M + G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   + S++    + G + E+  LF  M+  G+ PD I   +L+      G MDEA 
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 241 ELQNEMMGRGL 251
           +L   M+  G+
Sbjct: 537 KLLASMVSVGV 547



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 99/215 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  ++  YGT+I  LC     +D+ L   +M + GLT N ++ T+L+       +
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EMLD  I +  + F  +ID  CK G V E+   F  M   G+ P++  Y  
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L   M    + PD   Y  LI+GY +     +AL L   M   G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           V  ++  Y  ++ GL        A+ L+  +   G
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 112/234 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T+I G C+  K +++  LL+ M   G+  + V   TL++ Y +     +AL
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM+ S +   ++T+ +++ GL  +     A + +  +   G    ++ Y  ++ GL
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N  + A  +F  +   D+  +T  +  +I   LK     EA +L    +  G+  D+
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y+ +   L   G L+E   LF  M   G   D  +  S+++K  +RG++  A
Sbjct: 692 RTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 93/204 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K D+  YGT+I G C  S+ +D+  L  EM  +G++ N +    ++   F    
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L   +  S  ++ + T+ +++ GLCK+ L  EA+  F  +    L      +  
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 661

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L K   ++ A++LF       ++PD   Y+ + +  ++  S +E  +L   M E G
Sbjct: 662 MIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
              D     S+V  L + G +  A
Sbjct: 722 CSADSRMLNSIVRKLLQRGDITRA 745



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 7/200 (3%)

Query: 60  EPSEALSLLDEMLDS---RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
            P+ A+S  + M  +   ++  TV T+ +LI   C++G +       G +   G   +  
Sbjct: 69  SPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAI 128

Query: 117 VYTALIDGLCKKNCIERARNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
            +T L+ GLC       A ++    M +   IPD  +Y  L+ G       +EAL L + 
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 176 MTE---VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
           M +    G   D+ +Y +++ G  + G   +A   +HEM+ RGILPD +   S++    +
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248

Query: 233 RGNMDEAIELQNEMMGRGLL 252
              MD+A+E+ N M+  G++
Sbjct: 249 AQAMDKAMEVLNTMVKNGVM 268


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 122/236 (51%), Gaps = 1/236 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I GLC   +  ++  LL EM  +G   +    TTL+  + K+ +  +AL + ++++
Sbjct: 57  YNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 116

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDGLCKKNCI 131
                  VVT+  LIDGLCK G ++EAID FGRM   G   PN   Y +LI G C+   +
Sbjct: 117 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A NL + M +    PD   YT L++G+ K     +A +L N+MT  G+  ++  +TSL
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + GL R   L +A  +  EM  +   P      ++L  +     ++EA +   E M
Sbjct: 237 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM 292



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 1/204 (0%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
             V   +L+    KA   SEA  LL+EM+ S     + T+  LI G CKS    +A+  F
Sbjct: 53  TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 112

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLK 162
            ++   G  P+V  Y+ LIDGLCK+  ++ A +LF  M K    +P+T  Y +LI G+ +
Sbjct: 113 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 172

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                EA+NL  RM E G   D+  YT+L+ G  +   L +A  L ++M  +G+ P+ + 
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVT 232

Query: 223 CISLLKKHYERGNMDEAIELQNEM 246
             SL+        + +A+ +  EM
Sbjct: 233 FTSLMDGLCRENRLSDAVHILGEM 256



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 3/246 (1%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEP 61
            +  + D+  Y  +I GLC E + +++  L   M ++G    NTV   +L+  + + G+ 
Sbjct: 117 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA++LL+ M ++     VVT+  L++G CK   + +A D   +M   GL PNV  +T+L
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +DGLC++N +  A ++  EM ++   P    Y  ++DGY +    +EA   K  + E+  
Sbjct: 237 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA--RKFMLEEMDC 294

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++ ++  ++ GL +     EA  L  E   R   PD ++  +++        +DEA  
Sbjct: 295 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACR 354

Query: 242 LQNEMM 247
           +  +M+
Sbjct: 355 VYRKML 360



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 5/243 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C   K +D+  +  ++   G   + V  + L+D   K G   EA+ L 
Sbjct: 88  DIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLF 147

Query: 69  DEMLDS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             M+ S       VT+  LI G C+ G + EA++   RM + G  P+V  YT L++G CK
Sbjct: 148 GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 207

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              ++ A +L ++M ++ + P+   +T+L+DG  +     +A+++   M        +  
Sbjct: 208 LARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYT 267

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM-DEAIELQNEM 246
           Y +++ G  R   L+EAR    E +     P  ++  +++ +   + N   EA+EL  E 
Sbjct: 268 YNTILDGYCRVNQLEEARKFMLEEMD---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEA 324

Query: 247 MGR 249
             R
Sbjct: 325 RRR 327



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 87/174 (50%), Gaps = 1/174 (0%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           T VT+  LI GLCK+    EA D    M   G  P++  YT LI G CK    + A  +F
Sbjct: 53  TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 112

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL-DLNAYTSLVWGLSR 197
           +++  R   PD   Y+ LIDG  K    KEA++L  RM + G  + +   Y SL+ G  R
Sbjct: 113 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 172

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G + EA  L   M   G  PD +   +L+    +   +D+A +L N+M  +GL
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 226



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 2/170 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T++ G C  ++ +D+  LL++M   GLT N V  T+LMD   +    S+A+ +L
Sbjct: 194 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHIL 253

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM       TV T+  ++DG C+   + EA  +   + +    PNV  +  +I GLCK 
Sbjct: 254 GEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKV 311

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           N    A  L +E  +R   PD   YT +ID   + +   EA  +  +M E
Sbjct: 312 NRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLE 361



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 68/139 (48%), Gaps = 1/139 (0%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P    Y +LI GLCK      A +L +EM     IPD   YT LI G+ K +   +AL +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG-ILPDEILCISLLKKHY 231
             ++   G   D+  Y+ L+ GL + G L+EA  LF  MI  G  +P+ +   SL+    
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 232 ERGNMDEAIELQNEMMGRG 250
             G MDEA+ L   M   G
Sbjct: 172 RMGKMDEAMNLLERMAETG 190



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 79/157 (50%), Gaps = 3/157 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  ++  + +++ GLC E++  D+  +L EM+    +       T++D Y +  +
Sbjct: 221 MTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQ 280

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   + E +D      VV+F ++I GLCK     EA++          +P+V +YT 
Sbjct: 281 LEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 338

Query: 121 LIDGLCKKNCIERARNLFDEM-PKRDMIPDTTAYTAL 156
           +ID LC++  ++ A  ++ +M  +   +P++  Y+  
Sbjct: 339 VIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 4/109 (3%)

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           +P    Y +LI G  K E   EA +L   M   G   D+  YT+L+ G  +     +A  
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           +F +++ RG  PD +    L+    + G + EAI+L     GR + SGS
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDL----FGRMIKSGS 155


>gi|255684866|gb|ACU27922.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684900|gb|ACU27939.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684902|gb|ACU27940.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684904|gb|ACU27941.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684906|gb|ACU27942.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684912|gb|ACU27945.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684916|gb|ACU27947.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684920|gb|ACU27949.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684924|gb|ACU27951.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684926|gb|ACU27952.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684928|gb|ACU27953.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684954|gb|ACU27966.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684960|gb|ACU27969.1| At1g03560-like protein [Arabidopsis thaliana]
          Length = 193

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 1/188 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ V+++GLC
Sbjct: 1   VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V EA+DYF      GL  N   Y++LIDGL K   ++ A  LF+EM ++    D+ 
Sbjct: 61  KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            Y ALID + KH    EA+ L  RM  E G D  +  YT L+ G+ +    +EA  L+  
Sbjct: 121 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM 180

Query: 211 MIGRGILP 218
           MI +GI P
Sbjct: 181 MIDKGITP 188



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 70/144 (48%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           F  M   G  PNVA+YT LIDG  K   +E A  L   M      PD   Y+ +++G  K
Sbjct: 2   FENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           +   +EAL+  +     G+ ++   Y+SL+ GL + G + EA  LF EM  +G   D   
Sbjct: 62  NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 121

Query: 223 CISLLKKHYERGNMDEAIELQNEM 246
             +L+    +   +DEAI L   M
Sbjct: 122 YNALIDAFTKHRKVDEAIALFKRM 145



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 1/182 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G 
Sbjct: 5   MIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL          + +  + +  LIDGL K+G V EA   F  M + G   +   Y A
Sbjct: 65  VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEV 179
           LID   K   ++ A  LF  M + +    T   YT L+ G  K    +EAL L + M + 
Sbjct: 125 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDK 184

Query: 180 GV 181
           G+
Sbjct: 185 GI 186



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 1/154 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + +GL  N++  ++L+D   KAG 
Sbjct: 40  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 99

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID   K   V EAI  F RM  + G    V  YT
Sbjct: 100 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 159

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
            L+ G+ K++  E A  L+D M  + + P    +
Sbjct: 160 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACF 193



 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 62/119 (52%)

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           +F+ M ++   P+   YT LIDGY K  S ++A+ L +RM + G   D+  Y+ +V GL 
Sbjct: 1   VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           + G ++EA   FH     G+  + +   SL+    + G +DEA  L  EM  +G    S
Sbjct: 61  KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDS 119


>gi|50261843|gb|AAT72474.1| AT1G03560 [Arabidopsis lyrata subsp. petraea]
          Length = 201

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 1/188 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +   M   G   N  I T L+D Y K G   +A+ LL  M+D      VVT+ V+++GLC
Sbjct: 7   VFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLC 66

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V EA+DYF      GL  N   Y++LIDGL K   ++ A  LF+EM ++    D+ 
Sbjct: 67  KNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 126

Query: 152 AYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            Y ALID + KH    EAL L  RM  E G D  +  YT L+ G+ +    +EA  L+  
Sbjct: 127 CYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDM 186

Query: 211 MIGRGILP 218
           MI +GI P
Sbjct: 187 MIDKGITP 194



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 9/194 (4%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           E  ++ + M+    +  V  + VLIDG  K+G V +AI    RM D G +P+V  Y+ ++
Sbjct: 3   EGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVV 62

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M+E G  
Sbjct: 63  NGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCT 122

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYERGNMD 237
            D   Y +L+   ++ G + EA  LF  M       + +    IL   + K+H      +
Sbjct: 123 RDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEH----RNE 178

Query: 238 EAIELQNEMMGRGL 251
           EA++L + M+ +G+
Sbjct: 179 EALKLWDMMIDKGI 192



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 1/179 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 14  KGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEE 73

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+        + + +  + +  LIDGL K+G V EA   F  M + G   +   Y ALID
Sbjct: 74  AMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALID 133

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGV 181
              K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + G+
Sbjct: 134 AFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGI 192



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 1/156 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y  ++ GLC   + E++       + NGL  N++  ++L+D   KAG 
Sbjct: 46  MIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGR 105

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID   K G V EA+  F RM  + G    V  YT
Sbjct: 106 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYT 165

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
            LI G+ K++  E A  L+D M  + + P    + A
Sbjct: 166 ILISGMFKEHRNEEALKLWDMMIDKGITPTAACFRA 201


>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
          Length = 332

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 115/221 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   +IKAD+ +   I+  LC +    +++ L +EM E G+  N +    ++D++  +G 
Sbjct: 46  MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 105

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL  M++ +I   +VTF  LI+   K   V EA + +  M  + + P    Y +
Sbjct: 106 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 165

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG CK++ ++ A+ + D M  +   PD   ++ LI+GY K +     + +   M   G
Sbjct: 166 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 225

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  +   YT+L+ G  + G L  A+ L +EMI  G+ PD I
Sbjct: 226 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYI 266



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 125/255 (49%), Gaps = 10/255 (3%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG----------LTANTVICTTLMDAYF 56
           + ++  + T++  LC E +  ++  L+  M E G          + A+ VI T ++D   
Sbjct: 7   RPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRLC 66

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           K G    A +L  EM +  I   V+T+  +ID  C SG   +A      M +  ++P++ 
Sbjct: 67  KDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIV 126

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            ++ALI+   K+  +  A  ++ EM +  + P T  Y ++IDG+ K +   +A  + + M
Sbjct: 127 TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM 186

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              G   D+  +++L+ G  +   +     +F EM  RGI+ + +   +L+    + G++
Sbjct: 187 ASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 246

Query: 237 DEAIELQNEMMGRGL 251
           D A +L NEM+  G+
Sbjct: 247 DAAQDLLNEMISCGV 261



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 104/222 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y  +I   C   ++ D+  LL  M E  +  + V  + L++A+ K  +
Sbjct: 81  MHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK 140

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  +  EML   I  T +T+  +IDG CK   V +A      M   G  P+V  ++ 
Sbjct: 141 VSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFST 200

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++    +F EM +R ++ +T  YT LI G+ +      A +L N M   G
Sbjct: 201 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCG 260

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           V  D   +  ++ GL     L++A  +  ++    + P  I 
Sbjct: 261 VAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPRLIF 302



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 10/230 (4%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD----------SRIEVTVVTFCV 85
           M E G   N V   TLM++  + G   EAL+L+D M++          S I+  VV    
Sbjct: 1   MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           ++D LCK G    A + F  M + G+ PNV  Y  +ID  C       A  L   M ++ 
Sbjct: 61  IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   ++ALI+ ++K     EA  +   M    +      Y S++ G  +   + +A+
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            +   M  +G  PD +   +L+  + +   +D  +E+  EM  RG+++ +
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANT 230


>gi|260780324|gb|ACX50708.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780342|gb|ACX50717.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780358|gb|ACX50725.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780388|gb|ACX50740.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 199

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 101/192 (52%), Gaps = 1/192 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC + K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSL 191
           G D  +  YT L
Sbjct: 188 GCDQTVYTYTIL 199



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + D+ +Y TI+  LC +    ++  +  +MK  G+    V  T+L+      G 
Sbjct: 222 MKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGR 281

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+EM    I   +V F VLID +CK G V EA      M + G+ P+VA Y  
Sbjct: 282 WKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNT 341

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G C +  +  AR +F+ M  +  +PD  +++ L++GY K +   EA  L + MT  G
Sbjct: 342 LMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRG 401

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D  +Y +L+ GL +     EA  LF +M   G  P+ +    LL    ++G +D+A+
Sbjct: 402 LIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAM 461

Query: 241 ELQNEMMGRGL 251
            L   M   GL
Sbjct: 462 GLFRAMENSGL 472



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 123/241 (51%), Gaps = 2/241 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G CIE K   +  L   M   G   N    + ++    + G+ +E + LL+ M 
Sbjct: 164 FSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMK 223

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E  VV +  ++D LCK  LV EA+  F +M   G+ P V  YT+LI GL      +
Sbjct: 224 VVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWK 283

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L +EM   +++PD  A++ LID   K     EA  +   MTE+GV+ D+  Y +L+
Sbjct: 284 EAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLM 343

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNEMMGRGL 251
            G      + EAR +F  MI +G +PD +   S+L   Y +   +DEA +L +EM  RGL
Sbjct: 344 NGYCLRMEVVEARKVFEVMISKGRMPD-VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGL 402

Query: 252 L 252
           +
Sbjct: 403 I 403



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG  I   +  Y ++I GL    +++++  LL+EMK   +  + V  + L+D   K GE
Sbjct: 257 MKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGE 316

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  +L  M +  +E  V T+  L++G C    V EA   F  M   G  P+V  ++ 
Sbjct: 317 VSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSI 376

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK   I+ A+ LFDEM  R +IPDT +Y  LI G  +     EA  L   M   G
Sbjct: 377 LVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNG 436

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y+ L+  LS+ G+L +A  LF  M   G+ PD +    ++    + G   +A 
Sbjct: 437 YPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDAR 496

Query: 241 ELQNEMMGRGL 251
           EL  E+  +GL
Sbjct: 497 ELFAELSVKGL 507



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 118/246 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG NI  DL  +  +I  +C E +  +++++L  M E G+  +     TLM+ Y    E
Sbjct: 292 MKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRME 351

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + + M+       V +F +L++G CK+  + EA   F  M   GL P+   Y  
Sbjct: 352 VVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNT 411

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC+      A  LF +M      P+   Y+ L+D   K     +A+ L   M   G
Sbjct: 412 LISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSG 471

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL  Y  ++ G+ + G  ++AR LF E+  +G+ P+  +C   +    + G +DEA 
Sbjct: 472 LKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAH 531

Query: 241 ELQNEM 246
           +   +M
Sbjct: 532 KAFRQM 537



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 109/239 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G +   L     ++    L  +M+  G++ + +  T L++ + +        S+L +++
Sbjct: 94  FGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKII 153

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +E  V+TF  LI+G C  G +  AI+ F  M   G  PNV  Y+ +I GLC+     
Sbjct: 154 KLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTT 213

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L + M      PD   Y  ++D   K     EA+++  +M   G+   +  YTSL+
Sbjct: 214 EVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLI 273

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL   G  +EA  L +EM G  I+PD +    L+    + G + EA  +   M   G+
Sbjct: 274 HGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGV 332



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 94/202 (46%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L  A  +       +SL  +M  + I   V++  +LI+  C+   V       G++   G
Sbjct: 97  LFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLG 156

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           L PNV  ++ LI+G C +  I RA  LFD M  R   P+  +Y+ +I G  +     E +
Sbjct: 157 LEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVI 216

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   M  VG + D+  Y ++V  L +   + EA  +F +M G GILP  +   SL+   
Sbjct: 217 KLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGL 276

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
              G   EA  L NEM G  ++
Sbjct: 277 RNLGRWKEAFGLLNEMKGGNIM 298



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 77/148 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y T+I GLC   +  +++ L  +M  NG   N V  + L+D   K G 
Sbjct: 397 MTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGY 456

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L   M +S ++  +VT+ ++IDG+CK G  ++A + F  +   GL PN  V T 
Sbjct: 457 LDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTP 516

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIP 148
            IDG+CK   ++ A   F +M K D  P
Sbjct: 517 TIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 91/191 (47%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           ++ALS  + M+++    ++V F  L   L +    +  +    +M   G+  +V   T L
Sbjct: 73  NDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTIL 132

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+  C+   ++   ++  ++ K  + P+   ++ LI+G+        A+ L + M   G 
Sbjct: 133 INCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGY 192

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++++Y+ ++ GL R G   E   L   M   G  PD ++  +++ +  +   ++EA+ 
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVH 252

Query: 242 LQNEMMGRGLL 252
           +  +M G G+L
Sbjct: 253 IFCKMKGTGIL 263



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 55/120 (45%)

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           I  A + F+ M   + +P    +  L    ++ + +K  ++L  +M   G+  D+ + T 
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+    R  H+     +  ++I  G+ P+ I   +L+      G +  AIEL + M+ RG
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 131/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D+     ++ GLC + +F ++  L  EM++ G   N V    L+D   KA  
Sbjct: 270 MVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQR 329

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +E+LSLL E++   + + ++ +  L+D LCK G + EA D F         PN   YT 
Sbjct: 330 GNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTV 389

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++ A  +  EM ++ + P+   ++++I+G +K     +A +    M E G
Sbjct: 390 LIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERG 449

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D ++  Y +++ G  +C   + A  ++HEM+  G+  ++ +  SL+    + G +++A 
Sbjct: 450 IDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAE 509

Query: 241 ELQNEMMGRGLL 252
            L  EM  RG+L
Sbjct: 510 ALFREMNERGVL 521



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 123/278 (44%), Gaps = 35/278 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  DL +Y  ++  LC E K +++K +      +  T N V  T L+DA  KAG    
Sbjct: 343 RGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDG 402

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +L EM +  I   VVTF  +I+GL K G V +A DY   M + G+ PNV  Y  +ID
Sbjct: 403 AEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVID 462

Query: 124 G-----------------LC-----------------KKNC-IERARNLFDEMPKRDMIP 148
           G                 LC                 KKN  IE+A  LF EM +R ++ 
Sbjct: 463 GSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLL 522

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D   YT LIDG  K  +   A  +   +TE  +  D   Y   +  L   G  +EA    
Sbjct: 523 DHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFL 582

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            EM   G+ PD++   +++      G   +A++L N M
Sbjct: 583 EEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGM 620



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KN+  D  +Y   I  LC+  K ++++  L EM+  GL  + V   T++ A  + G+ ++
Sbjct: 553 KNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAK 612

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP---------- 113
           AL LL+ M  S I+  ++T+  LI GL ++G V +A      M   G  P          
Sbjct: 613 ALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ 672

Query: 114 -------------------------NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                                    ++ VY  L+  LC      +A  + +EM  R + P
Sbjct: 673 ACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAP 732

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           DT  + ALI G+ K      A +  ++M   G+  ++  + +L+ GL   G + E+ ++ 
Sbjct: 733 DTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVL 792

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +EM  RGI P  +    L+  + ++ N  EA+ L  EM+G+G L
Sbjct: 793 NEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFL 836



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 2/241 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTA--NTVICTTLMDAYFKAGEP 61
           + +  D     T++ GLC + + + +  L   M   G     + V   +L+D Y K G+ 
Sbjct: 131 RGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDM 190

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
             A ++ + M    + V VV +  L+ GLC++G V  A D    M   G+ PNV  YT  
Sbjct: 191 ETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMF 250

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I   C++N ++ A +L++EM ++ ++PD    +AL+ G  K   F EA  L   M ++G 
Sbjct: 251 IVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGA 310

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             +   Y  L+  L++     E+  L  E++ RG++ D I+  +L+    + G +DEA +
Sbjct: 311 APNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKD 370

Query: 242 L 242
           +
Sbjct: 371 M 371



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 119/256 (46%), Gaps = 10/256 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  D+  Y +++ GLC   + + ++ ++  MK +G+  N V  T  +  Y +   
Sbjct: 200 MKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNA 259

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A SL +EM+   +   VVT   L+ GLCK G   EA   F  M   G  PN   Y  
Sbjct: 260 VDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCM 319

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN-----LKNR 175
           LID L K      + +L  E+  R ++ D   YTAL+D   K     EA +     L + 
Sbjct: 320 LIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDN 379

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
            T  GV      YT L+  L + G++  A  +  EM  + I P+ +   S++    +RG 
Sbjct: 380 HTPNGV-----TYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGW 434

Query: 236 MDEAIELQNEMMGRGL 251
           + +A +   EM  RG+
Sbjct: 435 VGKATDYMREMKERGI 450



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 122/255 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  +IK +L  Y T+I GL      E +K LL+EM  +G +  ++    ++ A  +   
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRR 679

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L + + M+++ +   +  +  L+  LC +G+ R+A+     M   G+ P+   + A
Sbjct: 680 SDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNA 739

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K   ++ A + +D+M    + P+   +  L+ G        E+  + N M + G
Sbjct: 740 LILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRG 799

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++     Y  LV G  +  +  EA  L+ EM+G+G LP      +L+    + G M +A 
Sbjct: 800 IEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAK 859

Query: 241 ELQNEMMGRGLLSGS 255
           EL NEM  RG+L  S
Sbjct: 860 ELFNEMQNRGVLPTS 874



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 113/238 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + +++ G C     E +  +   MK  G+  + V   +L+    +AGE   A  ++
Sbjct: 173 DVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMV 232

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M    +E  VVT+ + I   C+   V +A   +  M   G+ P+V   +AL+ GLCK 
Sbjct: 233 DTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKD 292

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A  LF EM K    P+   Y  LID   K +   E+L+L   +   GV +DL  Y
Sbjct: 293 GRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMY 352

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           T+L+  L + G + EA+ +F   +     P+ +    L+    + GN+D A ++ +EM
Sbjct: 353 TALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEM 410



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 35/272 (12%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +++ GL    K E ++ L  EM E G+  + V  TTL+D  FK G    A  +  E+ + 
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK 553

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +    V + V I+ LC  G  +EA  +   M   GL P+   Y  +I    ++    +A
Sbjct: 554 NLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKA 613

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV------------- 181
             L + M +  + P+   Y+ LI G  +  + ++A  L N M+  G              
Sbjct: 614 LKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA 673

Query: 182 -------DL---------------DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
                  DL               D+  Y +LV  L   G  ++A V+  EM GRGI PD
Sbjct: 674 CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPD 733

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            I   +L+  H++ G++D A    ++M+  G+
Sbjct: 734 TITFNALILGHFKSGHLDNAFSTYDQMLYHGI 765



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 117/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K+I  ++  + +II GL        +   + EMKE G+  N V   T++D  FK   
Sbjct: 410 MEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLG 469

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  EML   +EV       L++GL K+G + +A   F  M + G+  +   YT 
Sbjct: 470 QEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTT 529

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGL K   +  A  +  E+ +++++PD   Y   I+        KEA +    M   G
Sbjct: 530 LIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTG 589

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +++   SR G   +A  L + M    I P+ I   +L+   +E G +++A 
Sbjct: 590 LKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAK 649

Query: 241 ELQNEMMGRGL 251
            L NEM   G 
Sbjct: 650 YLLNEMSSSGF 660



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 8/226 (3%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI--EVTVVTFCVLIDG 89
           LL+EM + G+  + V   T++    + G    A +L + M+       + VV +  L+DG
Sbjct: 124 LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDG 183

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
            CK G +  A     RM   G+  +V  Y +L+ GLC+   ++ AR++ D M +  + P+
Sbjct: 184 YCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPN 243

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              YT  I  Y +  +  +A +L   M   GV  D+   ++LV GL + G   EA  LF 
Sbjct: 244 VVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFR 303

Query: 210 EMIGRGILPDEI---LCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           EM   G  P+ +   + I  L K  +RGN  E++ L  E++ RG++
Sbjct: 304 EMEKIGAAPNHVTYCMLIDTLAKA-QRGN--ESLSLLGEVVSRGVV 346



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 104/235 (44%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           AD+ +Y T++  LC       + ++L EM   G+  +T+    L+  +FK+G    A S 
Sbjct: 697 ADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFST 756

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            D+ML   I   V TF  L+ GL  +G + E+      M   G+ P+   Y  L+ G  K
Sbjct: 757 YDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGK 816

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           ++    A  L+ EM  +  +P  + Y ALI  + K     +A  L N M   GV      
Sbjct: 817 QSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCT 876

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           Y  LV G S+  +  E R    +M  +G  P +    S+ +   + G   EA  L
Sbjct: 877 YDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRL 931



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  ++  YGT+I G       E +  +  EM   G+  N  I  +L++   K G+
Sbjct: 445 MKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGK 504

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L  EM +  + +  V +  LIDGL K+G +  A      + +  L P+  VY  
Sbjct: 505 IEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNV 564

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+ LC     + A +  +EM    + PD   Y  +I    +     +AL L N M    
Sbjct: 565 FINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSS 624

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +L  Y++L+ GL   G +++A+ L +EM   G  P  +    +L+   +    D  +
Sbjct: 625 IKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLIL 684

Query: 241 ELQNEMMGRGL 251
           E+   MM  GL
Sbjct: 685 EIHEWMMNAGL 695



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 75/174 (43%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  ++  + T++ GL    +  +S ++L+EMK+ G+  + +    L+  Y K     EA+
Sbjct: 765 ISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAV 824

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM+       V T+  LI    K G++ +A + F  M + G+ P    Y  L+ G 
Sbjct: 825 RLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGW 884

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            K       R    +M ++   P     +++   + K     EA  L   + +V
Sbjct: 885 SKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYKV 938



 Score = 38.1 bits (87), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 55/143 (38%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I+     Y  ++ G   +S   ++  L  EM   G          L+  + K G 
Sbjct: 795 MKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGM 854

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L +EM +  +  T  T+ +L+ G  K     E   +   M + G  P+    ++
Sbjct: 855 MSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSS 914

Query: 121 LIDGLCKKNCIERARNLFDEMPK 143
           +     K      AR L   + K
Sbjct: 915 ISRAFSKPGMSWEARRLLKNLYK 937


>gi|224576615|gb|ACN56981.1| At1g03560-like protein [Capsella rubella]
 gi|224576617|gb|ACN56982.1| At1g03560-like protein [Capsella rubella]
 gi|224576619|gb|ACN56983.1| At1g03560-like protein [Capsella rubella]
 gi|224576621|gb|ACN56984.1| At1g03560-like protein [Capsella rubella]
 gi|224576623|gb|ACN56985.1| At1g03560-like protein [Capsella rubella]
 gi|224576627|gb|ACN56987.1| At1g03560-like protein [Capsella rubella]
 gi|224576629|gb|ACN56988.1| At1g03560-like protein [Capsella rubella]
 gi|224576635|gb|ACN56991.1| At1g03560-like protein [Capsella rubella]
 gi|224576637|gb|ACN56992.1| At1g03560-like protein [Capsella rubella]
 gi|224576647|gb|ACN56997.1| At1g03560-like protein [Capsella grandiflora]
          Length = 196

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      G   N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F          ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDH--- 177

Query: 234 GNMDEAIELQNEMMGRGL 251
              +EA++L + M+ +G+
Sbjct: 178 -RNEEALKLWDMMIDKGI 194



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 1/179 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        +   +  + +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            L K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + G+
Sbjct: 136 ALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGI 194



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 1/149 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NG   N++  ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            LI G+ K +  E A  L+D M  + + P
Sbjct: 168 ILISGMFKDHRNEEALKLWDMMIDKGITP 196


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y +II  LC     + +  +L+ M +NG+  N +   +++  Y  + +
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQ 281

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L+D LCK+G   EA   F  M   GL P++A Y  
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCT 341

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + PD   +  LI  Y K E   EA+ + ++M + G
Sbjct: 342 LLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHG 401

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y +++  L + G + +A + F +MI  G+ P+ I+  SL+         D+A 
Sbjct: 402 LNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAE 461

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 462 ELILEMLDRGI 472



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y T++ G   +    +   LL  M  NG+  +  +   L+ AY K  +
Sbjct: 327 MTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEK 386

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  +M    +   VVT+  +I  LCKSG V +A+ YF +M D GL PN+ VYT+
Sbjct: 387 VDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 446

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC  +  ++A  L  EM  R +  +T  + ++I  + K     E+  L + M  +G
Sbjct: 447 LIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIG 506

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y++L+ G    G + EA  L   M   G+ PD +   +L+  +     MD+A+
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566

Query: 241 ELQNEMMGRGL 251
            L  EM+  G+
Sbjct: 567 ALFKEMVSSGV 577



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 122/239 (51%), Gaps = 3/239 (1%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKEN---GLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           ++ GLC E++ +++  LL  M ++   G   + V  TT+++ +FK G+  +A S   EML
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D RI   VVT+  +I  LCK   + +A++    M   G+ PN   Y +++ G C     +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A     +M    + PD   Y +L+D   K+    EA  + + MT+ G++ D+  Y +L+
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLL 343

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G +  G L E   L   M+  GI PD  +   L+  + ++  +DEA+ + ++M   GL
Sbjct: 344 QGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGL 402



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y +++  LC   +  +++ +   M + GL  +     TL+  Y   G 
Sbjct: 292 MRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  +LLD M+ + I      F +LI    K   V EA+  F +M   GL+PNV  Y A
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK   ++ A   F++M    + P+   YT+LI      + + +A  L   M + G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   + S++    + G + E+  LF  M+  G+ P+ I   +L+  +   G MDEA 
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531

Query: 241 ELQNEMMGRGL 251
           +L + M   G+
Sbjct: 532 KLLSSMFSVGM 542



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 97/208 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  ++  YG +I  LC     +D+ L   +M + GLT N ++ T+L+ +     +
Sbjct: 397 MRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDK 456

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EMLD  I +  + F  +I   CK G V E+   F  M   G+ PNV  Y+ 
Sbjct: 457 WDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYST 516

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L   M    M PD   Y  LI+GY +     +AL L   M   G
Sbjct: 517 LIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSG 576

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  ++  Y  ++ GL        A+ L+
Sbjct: 577 VSPNIITYNIILQGLFHTRRTAAAKELY 604



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 105/211 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++ +Y ++I  LCI  K++ ++ L+ EM + G+  NT+   +++ ++ K G 
Sbjct: 432 MIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGR 491

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  L D M+   ++  V+T+  LIDG C +G + EA      M   G+ P+   Y  
Sbjct: 492 VIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNT 551

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+ + ++ A  LF EM    + P+   Y  ++ G         A  L   +T+ G
Sbjct: 552 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSG 611

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             L+L+ Y  ++ GL +     EA  +F  +
Sbjct: 612 TQLELSTYNIILHGLCKNNLTDEALRMFQNL 642



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 96/208 (46%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            + +II   C E +  +S+ L   M   G+  N +  +TL+D Y  AG+  EA  LL  M
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               ++   VT+  LI+G C+   + +A+  F  M   G+ PN+  Y  ++ GL      
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A+ L+  + K     + + Y  ++ G  K+    EAL +   +    + L+   +  +
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 657

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  L + G   EA+ LF  +   G++PD
Sbjct: 658 IGALLKVGRNDEAKDLFAALSANGLVPD 685



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 113/234 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K ++  Y T+I G C+  K +++  LLS M   G+  + V   TL++ Y +     +AL
Sbjct: 507 VKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDAL 566

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM+ S +   ++T+ +++ GL  +     A + +  +   G    ++ Y  ++ GL
Sbjct: 567 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGL 626

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N  + A  +F  +   D+  +T  +  +I   LK     EA +L   ++  G+  D+
Sbjct: 627 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 686

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y+ +   L   G L+E   LF  M   G   +  +  S+++K  +RG++  A
Sbjct: 687 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 740



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 7/200 (3%)

Query: 60  EPSEALSLLDEMLDS---RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
            P+ A+S  + M  +   ++  TV T+ +LI   C++G +       G +   G      
Sbjct: 64  SPAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAI 123

Query: 117 VYTALIDGLCKKNCIERARNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
            +T L+ GLC       A ++    M +   +PD  + T L+ G       +EAL L + 
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 183

Query: 176 MTE---VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
           M +    G   D+ +YT+++ G  + G   +A   +HEM+ R I PD +   S++    +
Sbjct: 184 MADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243

Query: 233 RGNMDEAIELQNEMMGRGLL 252
              MD+A+E+   M+  G++
Sbjct: 244 GQAMDKAMEVLTTMVKNGVM 263


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 127/240 (52%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GL  + +  D   LLS ++E G  AN    +TL+   FK  +  EA+ L  +M+
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 374

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +  +V +  LIDGLC+ G + EA +    M + G  PN   Y++LI G  K    +
Sbjct: 375 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQ 434

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  ++ EM K + +P+   Y+ LI G  +    +EA+ +   M   G+  D+ AY+S++
Sbjct: 435 KAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMI 494

Query: 193 WGLSRCGHLQEARVLFHEMIGR--GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL   G ++    LF+EM+ +     PD +    LL+   ++ ++  AI+L N M+ RG
Sbjct: 495 HGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRG 554



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 123/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + D+  Y T++ GLC E + +++ LLL EM+  G   ++V    L++   K G+
Sbjct: 198 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 257

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 L+D M         VT+  +I+GLC  G + +A+    RM      PN   Y  
Sbjct: 258 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 317

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GL K+       +L   + +R    +  AY+ LI G  K E  +EA+ L  +M E G
Sbjct: 318 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 377

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y++L+ GL R G L EA+ +  EM+ +G  P+     SL+K  ++ GN  +AI
Sbjct: 378 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 437

Query: 241 ELQNEM 246
            +  EM
Sbjct: 438 RVWKEM 443



 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 123/235 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII GLC++ K + +  LL  M  +    N V   TL++   K G   + + LL  + 
Sbjct: 280 YNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 339

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +         +  LI GL K     EA+  + +M + G  PN+ VY+ALIDGLC++  ++
Sbjct: 340 ERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 399

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +  EM  +   P+   Y++LI G+ K  + ++A+ +   M +     +   Y+ L+
Sbjct: 400 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 459

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            GL   G L+EA +++  M+GRG+ PD +   S++      G+++  ++L NEM+
Sbjct: 460 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 3/217 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + ++ +Y  +I GLC E K +++K +L EM   G T N    ++L+  +FK G 
Sbjct: 373 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGN 432

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  EM  +      + + VLI GLC+ G +REA+  +  M   GL P+V  Y++
Sbjct: 433 SQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSS 492

Query: 121 LIDGLCKKNCIERARNLFDEM--PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           +I GLC    +E    LF+EM   + D  PD   Y  L+    K  S   A++L N M +
Sbjct: 493 MIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLD 552

Query: 179 VGVDLDLNAYTSLVWGL-SRCGHLQEARVLFHEMIGR 214
            G + DL      +  L  +    Q+ R    E++ R
Sbjct: 553 RGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR 589



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 35/248 (14%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           +  ++ N +    ++ A  K G    A+ +  EM   + E  V T+C L+DGLCK   + 
Sbjct: 165 KTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRID 224

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCK----------------KNCI---------- 131
           EA+     M   G  P+   +  LI+GLCK                K C+          
Sbjct: 225 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 284

Query: 132 ---------ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
                    ++A +L D M     +P+   Y  LI+G +K     + ++L + + E G  
Sbjct: 285 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHH 344

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +  AY++L+ GL +    +EA  L+ +M+ +G  P+ ++  +L+      G +DEA E+
Sbjct: 345 ANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEI 404

Query: 243 QNEMMGRG 250
             EM+ +G
Sbjct: 405 LCEMVNKG 412



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 38/237 (16%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD- 108
           +L++ Y  +G+      + D M   R       F ++     K+ L  +AI+ FGRM D 
Sbjct: 69  SLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDE 128

Query: 109 -------------------------------------FGLHPNVAVYTALIDGLCKKNCI 131
                                                  + PNV  +  +I  +CK   +
Sbjct: 129 FQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLV 188

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +RA  +F EM  +   PD   Y  L+DG  K +   EA+ L + M   G       +  L
Sbjct: 189 DRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVL 248

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + GL + G +     L   M  +G +P+E+   +++     +G +D+A+ L + M+ 
Sbjct: 249 INGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVA 305


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 124/255 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +K D     T+++ LC   ++ED++ LL    + G   + V   T+M AYFK   
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P  AL L D+M++ ++  ++ T+  LI GLC+   ++EAID      + GL P+   Y  
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNI 564

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   CK+  +E A    ++M +    PD      L++G   H    +AL L     E G
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +D+  Y +L+  + + G +  A   F +M  +G+ PD      +L    E G  +EA 
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684

Query: 241 ELQNEMMGRGLLSGS 255
            + +++   G LS S
Sbjct: 685 NMLHKLADSGKLSQS 699



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 133/283 (46%), Gaps = 36/283 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLT-ANTVICTTLMDAYFKAG 59
           M     + DL  Y  +  GLC   K +++  L  EM+  G    + V   TL+DA FK  
Sbjct: 304 MTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWR 363

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             S+AL LL+EM D  ++ T+VT  +++  LCK G + EA+    ++ + GL P+V  Y 
Sbjct: 364 CSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYN 423

Query: 120 ALIDGLCKKNCIERARNLFDEM-----------------------------------PKR 144
            LID  CK   + +A  L DEM                                   P+R
Sbjct: 424 TLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQR 483

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
             +PD  +Y  ++  Y K  + + AL L ++M E  +   ++ Y +L+ GL R   L+EA
Sbjct: 484 GFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA 543

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
               +E + +G++PDE     ++  + + G+++ A    N+M+
Sbjct: 544 IDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 123/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K  L  +  ++  LC E K E++   L ++ E GL  + +   TL+DAY KAG 
Sbjct: 375 MRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGN 434

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A +L+DEM+   +++   T   ++  LCK     +A +     P  G  P+   Y  
Sbjct: 435 VAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGT 494

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    K+   E A  L+D+M +R +IP  + Y  LI G  + E  KEA++  N   E G
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKG 554

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  ++    + G L+ A    ++M+     PD + C +L+      G +D+A+
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614

Query: 241 ELQNEMMGRG 250
           +L    + +G
Sbjct: 615 KLFESWVEKG 624



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++   C +    D+   LS M+  GL+ + V   TL++A+ + G   EA +LL  M 
Sbjct: 211 FNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 270

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  T  T+  L+    + G +++A      M  +G  P++  Y  L  GLC+   ++
Sbjct: 271 RDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVD 330

Query: 133 RARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            A  L DEM +    +PD   Y  L+D   K     +AL L   M + GV   L  +  +
Sbjct: 331 EAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIV 390

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           V  L + G L+EA     ++   G+ PD I   +L+  + + GN+ +A  L +EM+G+GL
Sbjct: 391 VKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGL 450



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 36/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G  +  D   Y T++   C +    +++ LL+ MK +G+        TL+ A+ + G 
Sbjct: 234 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGW 293

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH-PNVAVYT 119
             +A  +++ M     E  + T+ VL  GLC++G V EA      M   G   P+V  Y 
Sbjct: 294 IKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYN 353

Query: 120 ALIDG-----------------------------------LCKKNCIERARNLFDEMPKR 144
            L+D                                    LCK+  +E A    +++ + 
Sbjct: 354 TLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEE 413

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   Y  LID Y K  +  +A  L + M   G+ +D     ++++ L +    ++A
Sbjct: 414 GLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDA 473

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             L H    RG +PDE+   +++  +++  N + A+ L ++M+ R L+  
Sbjct: 474 EELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPS 523



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 3/226 (1%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGE--PSEALSLLDEMLDSRIEVTVVTFCVL 86
           ++LL S  +  G+  +      ++ A  ++    P  +L +   +++ R+     TF +L
Sbjct: 155 AQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLL 214

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           +   C  G + +A+     M  FGL P+   Y  L++  C+K  +  AR L   M +  +
Sbjct: 215 VHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGI 274

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P    Y  L+  + +    K+A  +   MT  G + DL  Y  L  GL + G + EA  
Sbjct: 275 APTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFR 334

Query: 207 LFHEMIGRGI-LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L  EM   G  LPD +   +L+   ++     +A+ L  EM  +G+
Sbjct: 335 LKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGV 380



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 1/226 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  D   Y  II   C E   E++    ++M EN    + V C TLM+     G+  +
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK 612

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L +  ++   +V V+T+  LI  +CK G V  A+ +F  M   GL P+   Y  ++ 
Sbjct: 613 ALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLS 672

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL-NLKNRMTEVGVD 182
            L +    E A N+  ++     +  + A   L          KE     +   +E   D
Sbjct: 673 ALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQD 732

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
             L  Y   + GL   G L+EA+ +  EM+ +G+  D    I+L++
Sbjct: 733 NALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLME 778



 Score = 37.0 bits (84), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 13/136 (9%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTL-------MD 53
           M+ K ++ D   Y  ++  L    + E++  +L ++ ++G  + +  C  L        D
Sbjct: 655 MEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEAD 714

Query: 54  AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
                G+P    S  ++  D+ +E    T+   ++GLC  G ++EA      M   G+  
Sbjct: 715 VKEHEGKPEAESS--EKAQDNALE----TYMERLNGLCTGGQLKEAKAVLDEMMQKGMPV 768

Query: 114 NVAVYTALIDGLCKKN 129
           + + Y  L++GL K+ 
Sbjct: 769 DCSTYITLMEGLIKRQ 784


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 128/252 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K ++  Y T++ G   +  F+++  LL EMK+NG++ N      L++       
Sbjct: 462 MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDR 521

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   +L   +      T++T+  +I+G  K+G++  A   + +M + GL PN+  YT+
Sbjct: 522 VCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTS 581

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            IDG C+  C + A  + +++ +R + PD  AY ALI+G+ +  +   AL L   + + G
Sbjct: 582 FIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDG 641

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y SL+ G      ++E    +  MI  GI+ D     +L+    + GN+  A+
Sbjct: 642 LAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFAL 701

Query: 241 ELQNEMMGRGLL 252
           EL +EMM +G +
Sbjct: 702 ELYSEMMAKGYI 713



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 116/246 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  +   Y  +I G+C+  +  +   +L      G     +   ++++ + KAG 
Sbjct: 497 MKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGM 556

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++  +M +  +   ++T+   IDG C++G    A+     +   GL P++  Y A
Sbjct: 557 MGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNA 616

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C++  +  A  L   + K  + P+T  Y +LI GY      KE       M + G
Sbjct: 617 LINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGG 676

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D + YT+L+ G S+ G++  A  L+ EM+ +G +PD     +L       G++D A 
Sbjct: 677 IVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAK 736

Query: 241 ELQNEM 246
           +L  EM
Sbjct: 737 KLLEEM 742



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 114/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G         +  +  +M+E GL  N +  T+ +D Y + G    AL +L+++ 
Sbjct: 544 YNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVR 603

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++  +V +  LI+G C+ G +  A+     +   GL PN  VY +LI G    N ++
Sbjct: 604 RRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMK 663

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
                ++ M K  ++ DT+ YT LIDG+ K  +   AL L + M   G   D   +T+L 
Sbjct: 664 EVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALT 723

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL R G +  A+ L  EM    + P+  +   L+  +     + EA  L +EM+  G+
Sbjct: 724 HGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGI 782



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 118/253 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +K  +  Y +++ G C +   +++  L SEM   G   N V   TLM  Y    +
Sbjct: 427 MKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKD 486

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +LLDEM  + +     T+ VLI+G+C    V E           G  P +  Y +
Sbjct: 487 FDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNS 546

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G  K   +  A  ++ +M ++ + P+   YT+ IDGY +      AL + N +   G
Sbjct: 547 IINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG 606

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ AY +L+ G  + G++  A  L   ++  G+ P+ ++  SL+  +     M E  
Sbjct: 607 LQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVS 666

Query: 241 ELQNEMMGRGLLS 253
           +    M+  G+++
Sbjct: 667 KFYESMIKGGIVA 679



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 1/240 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +YG +I G       + +  L  +M   GL  +T   + ++          +A+ L +EM
Sbjct: 334 MYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEM 393

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            DS +   V T+  LI   C++  +REA++ F RM   G+ P++  Y +L+ G CKK C+
Sbjct: 394 ADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCM 452

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A  L+ EMP     P+   Y  L+ GY+  + F  A  L + M + GV  +   Y  L
Sbjct: 453 DEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVL 512

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G+     + E   +    +  G +P  +   S++    + G M  A  +  +M  +GL
Sbjct: 513 INGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGL 572



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 93/192 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ + ++ D+  Y  +I G C E     +  LL  + ++GL  NTV+  +L+  Y     
Sbjct: 602 VRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNM 661

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E     + M+   I     T+  LIDG  K G V  A++ +  M   G  P+   +TA
Sbjct: 662 MKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTA 721

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L  GLC+   I+ A+ L +EM + D+ P+   Y  LI+GYL+    +EA  L + M  +G
Sbjct: 722 LTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMG 781

Query: 181 VDLDLNAYTSLV 192
           +  D   Y  LV
Sbjct: 782 IQPDDTTYDILV 793



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 46/287 (16%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GL  + +++D+  L  EM ++GL  +      L+  + +A +  EAL+L D M  + 
Sbjct: 373 VLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAG 431

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY----------------- 118
           ++ ++ T+  L+ G CK G + EA+  +  MP  G  PNV  Y                 
Sbjct: 432 VKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAY 491

Query: 119 ------------------TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
                               LI+G+C  + +     +         IP    Y ++I+G+
Sbjct: 492 ALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGF 551

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +K      A  +  +M E G+  ++  YTS + G  R G    A  + +++  RG+ PD 
Sbjct: 552 VKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDI 611

Query: 221 ILCISLLKKHYERGNMDEAIEL----------QNEMMGRGLLSGSKN 257
           +   +L+    + GNM  A++L           N ++   L++G KN
Sbjct: 612 VAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKN 658



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 105/231 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +  ++  Y + I G C     + +  +L++++  GL  + V    L++ + + G 
Sbjct: 567 MREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGN 626

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL LL  +L   +    V +  LI G     +++E   ++  M   G+  + + YT 
Sbjct: 627 MSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTT 686

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +  A  L+ EM  +  IPD   +TAL  G  +      A  L   M  + 
Sbjct: 687 LIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLD 746

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
           V  ++  Y  L+ G  R   LQEA  L  EM+  GI PD+     L+ K +
Sbjct: 747 VRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKF 797



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 118/286 (41%), Gaps = 36/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G+  + D  ++  ++     E   ED+  L  EM    +  +  +    + A  K G+
Sbjct: 183 MRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGD 242

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +L EM +   +    T+  ++D L K+G + EA+     M D G   +V V T 
Sbjct: 243 GGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATT 302

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI----------------------- 157
           L+ G C +  +  A NLF E  K  ++P    Y  LI                       
Sbjct: 303 LMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQG 362

Query: 158 ------------DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                        G L    +K+A+ L   M + G+  D+  Y +L+    +   L+EA 
Sbjct: 363 LLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREAL 421

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            LF  M   G+ P      SLL  + ++G MDEA++L +EM   G 
Sbjct: 422 NLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGF 467



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 94/228 (41%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           S  +D+  L  EM+  G   +  +   LM A  K G   +A+ L DEM  + I+     +
Sbjct: 171 SSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVY 230

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            + I  LCK G    A+     M + G       Y  ++D L K   +E A  + DEM  
Sbjct: 231 ALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRD 290

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
                D    T L+ GY   +    ALNL     + G+      Y  L+ G  + G  Q+
Sbjct: 291 AGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQK 350

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A  L  +M G+G+LP       +LK         +A+ L  EM   GL
Sbjct: 351 AYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL 398



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 97/222 (43%)

Query: 34  SEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS 93
           + M   G+  +    T L+    +     +AL+L  EM      V    F  L+    K 
Sbjct: 146 AHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKE 205

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G+  +A+  F  MP   + P+  VY   I  LCK     RA  +  EM +         Y
Sbjct: 206 GMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTY 265

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             ++D  +K    +EAL + + M + G  +D+   T+L+ G      +  A  LF E + 
Sbjct: 266 RTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLK 325

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            GI+P +++   L++   + G   +A EL  +M G+GLL  +
Sbjct: 326 DGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPST 367



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 82/192 (42%)

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           PS A      M+   +   + +   L+    +    ++A+  F  M   G   +  ++ A
Sbjct: 138 PSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDA 197

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+    K+   E A  LFDEMP  ++ PD   Y   I    K      AL +   M EVG
Sbjct: 198 LMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVG 257

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            D     Y ++V  L + G ++EA  +  EM   G   D I+  +L++ +  R  +  A+
Sbjct: 258 FDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNAL 317

Query: 241 ELQNEMMGRGLL 252
            L  E +  G++
Sbjct: 318 NLFKETLKDGIV 329


>gi|341605791|gb|AEK82998.1| pentatricopeptide repeat superfamily protein [Capsella grandiflora]
          Length = 208

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 1/198 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+    ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCXNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSLVWGLSR 197
           G D  +  YT L+ G+ +
Sbjct: 188 GCDQTVYTYTILISGMFK 205



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCXNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 87/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSX 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D     +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCXNALIDALTKHGKVDEAMTLFKRM 183



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   +   
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Glycine max]
          Length = 654

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 127/250 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K  +  + ++++G C E K  ++K +L +MK+ G+  + V+   L+  Y +AG+  +A  
Sbjct: 258 KPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYD 317

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL EM   R E    ++ VLI  LCK   + EA   F  M   G   +V  Y+ LI G C
Sbjct: 318 LLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFC 377

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   I+R   L DEM ++   P+   Y  ++  + K E  +E   L N M ++G   DL+
Sbjct: 378 KWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLS 437

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +++    + G ++E   L++EM   G+ P     + ++    E+G + EA E   EM
Sbjct: 438 IYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEM 497

Query: 247 MGRGLLSGSK 256
           +GRGL +  +
Sbjct: 498 VGRGLFTAPQ 507



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 1/219 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L EM + G   +  +   L+DA  K G   EA SL ++M   R + +V  F  L+ G C
Sbjct: 214 VLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RYRWKPSVKHFTSLLYGWC 272

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G + EA     +M D G+ P++ VY  L+ G  +   +  A +L  EM ++   P+ T
Sbjct: 273 KEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNAT 332

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +YT LI    KHE  +EA  L   M   G   D+  Y++L+ G  + G ++    L  EM
Sbjct: 333 SYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEM 392

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I +G  P++++   ++  H ++  ++E  EL NEM   G
Sbjct: 393 IQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIG 431



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 96/217 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I+ D+ +Y  ++ G     K  D+  LL EM+      N    T L+ +  K   
Sbjct: 287 MKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHER 346

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM  +  +  VVT+  LI G CK G ++   +    M   G  PN  +Y  
Sbjct: 347 LEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQH 406

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    KK  +E  + L +EM K    PD + Y  +I    K    KE + L N M   G
Sbjct: 407 IMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSG 466

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +   ++ +  ++ G    G L EA   F EM+GRG+ 
Sbjct: 467 LSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLF 503



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 6/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    +AD+  Y T+I G C   K +    LL EM + G   N VI   +M A+ K  E
Sbjct: 357 MQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEE 416

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L++EM        +  +  +I   CK G V+E I  +  M   GL P +  +  
Sbjct: 417 LEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVI 476

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFKEALNLKNRMT- 177
           +I+G  ++ C+  A   F EM  R +   P       L++  L+ E  + A +  N +T 
Sbjct: 477 MINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCITA 536

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL---LKKHYERG 234
             G  L+++A+T  +  L   GH++EA     +M+ + ++P+      L   LKK Y R 
Sbjct: 537 SKGCQLNVSAWTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGLKKLYNRQ 596

Query: 235 NMDEAIELQNEM 246
              E  E   +M
Sbjct: 597 FAAEITEKVRKM 608



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 2/186 (1%)

Query: 66  SLLDEMLDSRIE-VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +L++EM       +T   F +L+     + +V +A++    MP +G  P+  V+  L+D 
Sbjct: 177 ALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDA 236

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK   ++ A +LF++M  R   P    +T+L+ G+ K     EA ++  +M ++G++ D
Sbjct: 237 LCKNGSVKEAASLFEDMRYR-WKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPD 295

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y +L+ G ++ G + +A  L  EM  +   P+      L++   +   ++EA  L  
Sbjct: 296 IVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFV 355

Query: 245 EMMGRG 250
           EM   G
Sbjct: 356 EMQTNG 361


>gi|260780352|gb|ACX50722.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 199

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 100/192 (52%), Gaps = 1/192 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      G   N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSL 191
           G D  +  YT L
Sbjct: 188 GCDQTVYTYTIL 199



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G  ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 88/180 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F          ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGIQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G   + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 129/251 (51%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N + D+ +Y +II  LC + +  ++  L S+M   G++ +    T+L+ +     E
Sbjct: 200 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 259

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL++M++S+I   VV F  ++D LCK G + EA D    M   G+ PNV  Y A
Sbjct: 260 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 319

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C ++ ++ A  +FD M      P+  +Y  LI+GY K +   +A  L   M +  
Sbjct: 320 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 379

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +L+      G LQ+A  LFHEM+  G +PD      LL    ++ ++DEA+
Sbjct: 380 LIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 438

Query: 241 ELQNEMMGRGL 251
            L   + G  +
Sbjct: 439 ALLKTIEGSNM 449



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 119/249 (47%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GLC+E K  D+  L  +M   G   N V   TL++   K G  + A+ 
Sbjct: 136 QPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIR 195

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL  M     +  VV +  +ID LCK   V EA + F +M   G+ P++  YT+LI  LC
Sbjct: 196 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC 255

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    L ++M    ++PD   ++ ++D   K     EA ++ + M   GV+ ++ 
Sbjct: 256 NLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVV 315

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +L+ G      + EA  +F  M+  G  P+ I   +L+  + +   MD+A  L  EM
Sbjct: 316 TYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEM 375

Query: 247 MGRGLLSGS 255
             + L+  +
Sbjct: 376 CQKELIPNT 384



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 1/248 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++ ++  Y  ++ G C++S+ +++  +   M  NG   N +   TL++ Y K     +
Sbjct: 308 RGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 367

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L +EM    +    VT+  L+   C  G +++AI  F  M   G  P++A Y  L+D
Sbjct: 368 ATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLD 426

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCKK+ ++ A  L   +   +M PD   YT +IDG  +    + A ++ + ++  G+  
Sbjct: 427 YLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRP 486

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  YT ++ GL R G L EA  LF EM G G  PD     ++ +   +      AI+L 
Sbjct: 487 NVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLL 546

Query: 244 NEMMGRGL 251
            EM+ RG 
Sbjct: 547 QEMLARGF 554



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 123/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+     +I   C  ++   +  +L+++ + G   +T   TTL+      G+
Sbjct: 95  MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L D+M+    +  VVT+  LI+GLCK G    AI     M      P+V VYT+
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   +  A NLF +M  + + PD   YT+LI        +K    L N+M    
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  ++++V  L + G + EA  +   MI RG+ P+ +   +L+  H  +  MDEA+
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334

Query: 241 ELQNEMMGRG 250
           ++ + M+  G
Sbjct: 335 KVFDTMVHNG 344



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 106/220 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++M   G+  +      L++++        A S+L ++L    +    TF  LI GLC
Sbjct: 91  LSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLC 150

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + +A+  F +M   G  PNV  Y  LI+GLCK      A  L   M + +  PD  
Sbjct: 151 VEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVV 210

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT++ID   K     EA NL ++M   G+  D+  YTSL+  L      +    L ++M
Sbjct: 211 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 270

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I   I+PD ++  +++    + G + EA ++ + M+ RG+
Sbjct: 271 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV 310



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 1/207 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + + +  L  EM +  L  NTV   TLM      G   +A++L  EM+
Sbjct: 352 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAIALFHEMV 410

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  + T+ +L+D LCK   + EA+     +    + P++ +YT +IDG+C+   +E
Sbjct: 411 AHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELE 470

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR++F  +  + + P+   YT +I+G  +     EA  L   M   G   D   Y ++ 
Sbjct: 471 AARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTIT 530

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
            GL +      A  L  EM+ RG   D
Sbjct: 531 QGLLQNKEALRAIQLLQEMLARGFSAD 557



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 1/180 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++   C   + +D+  L  EM  +G   +      L+D   K     EA++LL  + 
Sbjct: 387 YNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S ++  +  + ++IDG+C++G +  A D F  +   GL PNV  YT +I+GLC++  ++
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 505

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM      PD   Y  +  G L+++    A+ L   M   G   D++  T LV
Sbjct: 506 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 92/209 (44%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +TV    L+ +  K  +     SL ++M    I   V T  +LI+  C    +  A    
Sbjct: 68  STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVL 127

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            ++   G  P+ A +T LI GLC +  I  A +LFD+M      P+   Y  LI+G  K 
Sbjct: 128 AKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKV 187

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
            +   A+ L   M +     D+  YTS++  L +   + EA  LF +M+G+GI PD    
Sbjct: 188 GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTY 247

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            SL+              L N+M+   ++
Sbjct: 248 TSLIHSLCNLCEWKHVTTLLNQMINSKIM 276



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 86/189 (45%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +ALS  + ML      + V F  L+  + K+           +M  FG+ P+V     LI
Sbjct: 52  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 111

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C  N +  A ++  ++ K    PDT  +T LI G        +AL+L ++M   G  
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQ 171

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL + G+   A  L   M      PD ++  S++    +   + EA  L
Sbjct: 172 PNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNL 231

Query: 243 QNEMMGRGL 251
            ++M+G+G+
Sbjct: 232 FSKMVGQGI 240



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 70/150 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL  Y  ++  LC +S  +++  LL  ++ + +  +  I T ++D   +AGE   A  + 
Sbjct: 417 DLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIF 476

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    +   V T+ ++I+GLC+ GL+ EA   F  M   G  P+   Y  +  GL + 
Sbjct: 477 SNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQN 536

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID 158
               RA  L  EM  R    D +  T L++
Sbjct: 537 KEALRAIQLLQEMLARGFSADVSTTTLLVE 566



 Score = 40.0 bits (92), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 26/123 (21%), Positives = 52/123 (42%)

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A + F+ M      P T  +  L+    K + +    +L N+M   G+  D+   
Sbjct: 48  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 107

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+        L  A  +  +++  G  PD     +L++     G + +A+ L ++M+G
Sbjct: 108 NILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 167

Query: 249 RGL 251
            G 
Sbjct: 168 EGF 170


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 125/235 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC++ K + +  LL  M  +    N V   TL++   K    ++A+ LL  M 
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +    +    + VLI GL K G   EA+  + +M + G  PN+ VY+ L+DGLC++    
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ + + M     +P+   Y++L+ G+ K    +EA+ +   M + G   +   Y+ L+
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            GL   G ++EA +++ +M+  GI PD +   S++K     G+MD A++L +EM+
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529



 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 117/234 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ GLC E + +++ LLL EM+  G + + VI   L+D   K G+ +    L+D M 
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   VT+  LI GLC  G + +A+    RM      PN   Y  LI+GL K+    
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M +R    +   Y+ LI G  K    +EA++L  +M E G   ++  Y+ LV
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL R G   EA+ + + MI  G LP+     SL+K  ++ G  +EA+++  EM
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 118/252 (46%), Gaps = 2/252 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           NI  +   +  +I  LC + +F D  + +   M E     +     TLMD   K     E
Sbjct: 182 NISPNGLSFNLVIKALC-KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ LLDEM       + V + VLIDGLCK G +         M   G  PN   Y  LI 
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC K  +++A +L + M     IP+   Y  LI+G +K     +A+ L + M E G  L
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           + + Y+ L+ GL + G  +EA  L+ +M  +G  P+ ++   L+      G  +EA E+ 
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420

Query: 244 NEMMGRGLLSGS 255
           N M+  G L  +
Sbjct: 421 NRMIASGCLPNA 432



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 109/227 (48%), Gaps = 3/227 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I GL  E K E++  L  +M E G   N V+ + L+D   + G+P+EA  +L+ M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           + S       T+  L+ G  K+GL  EA+  +  M   G   N   Y+ LIDGLC    +
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM---TEVGVDLDLNAY 188
           + A  ++ +M    + PDT AY+++I G     S   AL L + M    E     D+  Y
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
             L+ GL     +  A  L + M+ RG  PD I C + L    E+ N
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 8/220 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K ++ +Y  ++ GLC E K  ++K +L+ M  +G   N    ++LM  +FK G 
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM  +        + VLIDGLC  G V+EA+  + +M   G+ P+   Y++
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507

Query: 121 LIDGLCKKNCIERARNLFDEM-----PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
           +I GLC    ++ A  L+ EM     PK    PD   Y  L+DG    +    A++L N 
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQ--PDVVTYNILLDGLCMQKDISRAVDLLNS 565

Query: 176 MTEVGVDLDLNAYTSLVWGLS-RCGHLQEARVLFHEMIGR 214
           M + G D D+    + +  LS +     + R    E++ R
Sbjct: 566 MLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 4/206 (1%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV----VTFCVLIDGLCKSGLVREAIDYFG 104
            ++++     G     L   D +++S + + +    ++F ++I  LCK   V  AI+ F 
Sbjct: 152 NSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFR 211

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            MP+    P+   Y  L+DGLCK+  I+ A  L DEM      P    Y  LIDG  K  
Sbjct: 212 GMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG 271

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
                  L + M   G   +   Y +L+ GL   G L +A  L   M+    +P+++   
Sbjct: 272 DLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYG 331

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRG 250
           +L+    ++    +A+ L + M  RG
Sbjct: 332 TLINGLVKQRRATDAVRLLSSMEERG 357


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y T++ G   +    +   LL  M  NG+  +  +   L+ AY K  +
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEK 391

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  +M    +   VV +  +ID LCKSG V +A+ YF +M D GL PN+ VYT+
Sbjct: 392 VDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTS 451

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC  +  ++A  L  EM  R +  +T  + ++ID + K     E+  L + M  +G
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y +L+ G    G + EA  L   M+  G+ PD +   +L+  +     MD+A+
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 241 ELQNEMMGRGL 251
            L  EM+  G+
Sbjct: 572 ALFKEMVSSGV 582



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y +II  LC     + +  +L+ M +NG+  + +   +++  Y  +G+
Sbjct: 227 MLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L++ LCK+G   EA   F  M   GL P++A Y  
Sbjct: 287 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 346

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + PD   +  LI  Y K E   +A+ + ++M + G
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 406

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y +++  L + G + +A + F +MI  G+ P+ I+  SL+         D+A 
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAE 466

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 467 ELILEMLDRGI 477



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 124/250 (49%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G     D+  Y T++ G   E   + +     EM + G+  + V  ++++ A  KA   
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +A+ +L+ M+ + +    +T+  ++ G C SG  +EAI    +M   G+ PNV  Y++L
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++ LCK      AR +FD M KR + PD   Y  L+ GY    +  E   L + M   G+
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D + +  L+   ++   + +A ++F +M   G+ P+ +   +++    + G++D+A+ 
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 242 LQNEMMGRGL 251
              +M+  GL
Sbjct: 433 YFEQMIDEGL 442



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 135/292 (46%), Gaps = 37/292 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++ +Y ++I GLC   K++ ++ L+ EM + G+  NT+   +++D++ K G 
Sbjct: 437 MIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 496

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  L D M+   ++  ++T+  LIDG C +G + EA      M   G+ P++  Y  
Sbjct: 497 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 556

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+ + ++ A  LF EM    + P+   Y  ++ G         A  L   +T+ G
Sbjct: 557 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616

Query: 181 VDLDLNAYTSLVWGLS-----------------------------------RCGHLQEAR 205
             L+L+ Y  ++ GL                                    +CG + EA+
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 676

Query: 206 VLFHEMIGRGILPDEILCISLLKKH-YERGNMDEAIELQNEMMGRGLLSGSK 256
            LF      G++PD +   SL+ ++  E+G+++E  +L   M   G  + S+
Sbjct: 677 DLFAAHSANGLVPD-VRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSR 727



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ ++  Y +++  LC   +  +++ +   M + GL  +     TL+  Y   G 
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  +LLD M+ + I+     F +LI    K   V +A+  F +M   GL+PNV  Y  
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   ++ A   F++M    + P+   YT+LI G    + + +A  L   M + G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   + S++    + G + E+  LF  M+  G+ PD I   +L+      G MDEA 
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 241 ELQNEMMGRGL 251
           +L   M+  G+
Sbjct: 537 KLLASMVSVGV 547



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 99/215 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  ++  YGT+I  LC     +D+ L   +M + GLT N ++ T+L+       +
Sbjct: 402 MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDK 461

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EMLD  I +  + F  +ID  CK G V E+   F  M   G+ P++  Y  
Sbjct: 462 WDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L   M    + PD   Y  LI+GY +     +AL L   M   G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           V  ++  Y  ++ GL        A+ L+  +   G
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 616



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 112/234 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T+I G C+  K +++  LL+ M   G+  + V   TL++ Y +     +AL
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM+ S +   ++T+ +++ GL  +     A + +  +   G    ++ Y  ++ GL
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N  + A  +F  +   D+  +T  +  +I   LK     EA +L    +  G+  D+
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y+ +   L   G L+E   LF  M   G   D  +  S+++K  +RG++  A
Sbjct: 692 RTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 7/200 (3%)

Query: 60  EPSEALSLLDEMLDS---RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
            P+ A+S  + M  +   ++  TV T+ +LI   C++G +       G +   G   +  
Sbjct: 69  SPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAI 128

Query: 117 VYTALIDGLCKKNCIERARNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
            +T L+ GLC       A ++    M +   IPD  +Y  L+ G       +EAL L + 
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 176 MTE---VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
           M +    G   D+ +Y +++ G  + G   +A   +HEM+ RGILPD +   S++    +
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248

Query: 233 RGNMDEAIELQNEMMGRGLL 252
              MD+A+E+ N M+  G++
Sbjct: 249 AQAMDKAMEVLNTMVKNGVM 268


>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
 gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
 gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
          Length = 410

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 125/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ +L  Y  +I   C   +F+ ++LL  EM   G+  N V    L+    +  +
Sbjct: 99  MRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSK 158

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L + M    I  ++VTF +LIDG  K+G +  A+ +F +M   GL P+V  Y  
Sbjct: 159 LKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNE 218

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   I RA   F +M +R + P    YT LI  + K      A  + + M + G
Sbjct: 219 LICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAG 278

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +++D+ +Y  L+  L   G +  AR LF  M  +G+ P+ +L   ++  +   G+  +A+
Sbjct: 279 LEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKAL 338

Query: 241 ELQNEMMGRGLL 252
            L  EM   GL+
Sbjct: 339 RLIMEMRKNGLI 350



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 109/250 (43%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K  +   D+     ++   C      +++ +   M   G+  N V  T L++ YF  G  
Sbjct: 30  KSGDAALDVAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHR 89

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
               +L  EM    +E  + T+  LI   C++G  + A   F  MP  G+  NV  Y  L
Sbjct: 90  EMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNIL 149

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I GLC+ + ++ A  LF+ M +  + P    +  LIDGY K      AL+  N+M   G+
Sbjct: 150 IAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGL 209

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
              +  Y  L+ G  R   +  A   F +M  RG+ P ++    L+    +   MD A  
Sbjct: 210 PPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFM 269

Query: 242 LQNEMMGRGL 251
           + +EM   GL
Sbjct: 270 MLSEMEKAGL 279



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 113/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  ++  Y  +I GLC  SK +D+  L   M+  G+  + V    L+D Y KAG+
Sbjct: 134 MPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGK 193

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + AL   ++M  + +  +VVT+  LI G C+   +  A+  F  M + GL P    YT 
Sbjct: 194 MANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTI 253

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI    K+N ++RA  +  EM K  +  D  +Y  L+           A  L   M   G
Sbjct: 254 LIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKG 313

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y  +++G  R G   +A  L  EM   G++P+       ++     G   EA 
Sbjct: 314 VKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAE 373

Query: 241 ELQNEMMGRGL 251
            L ++M   GL
Sbjct: 374 ALIDDMEHAGL 384



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  YG ++  LC+E K   ++ L   M   G+  N+V+   ++  Y + G 
Sbjct: 274 MEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGS 333

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L+ EM  + +   V ++C+ I  LC  G  +EA      M   GL  +  +   
Sbjct: 334 SYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRI 393

Query: 121 LIDG 124
           L+D 
Sbjct: 394 LLDA 397



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 67/159 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +      Y  +I     E++ + + ++LSEM++ GL  +      L+ A    G+
Sbjct: 239 MKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGK 298

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L   M    ++   V + ++I G  + G   +A+     M   GL PNVA Y  
Sbjct: 299 MMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCL 358

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
            I  LC +   + A  L D+M    +    T    L+D 
Sbjct: 359 TIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILLDA 397


>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 418

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK ED+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 119/235 (50%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ +E
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKME 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+    + G+++ A   +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMI 338



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 118/244 (48%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A L  +  ++     E +   ++ +   + + GL  + V   TLM+ Y K G+  E   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            + M  S ++  V T+ VLI+GLCK   + +A + F  M D GL PN   +T LIDG CK
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +  A  ++ +M  + + PD   Y  LI G  K    K+A +L + M+  G+  D   
Sbjct: 254 NGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+L+ G  + G L+ A      MI   I  D++   +L+    + G   +A ++  EM+
Sbjct: 314 YTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 248 GRGL 251
             GL
Sbjct: 374 SVGL 377



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 102/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   +++A  LF EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +  A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVXLAMEIYKQMLSQSL 272



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 91/183 (49%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +E L+     ++  F +L+    K G +R A   F  +  +GL P+V  +  L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++    L + M    + PD   Y+ LI+G  K    ++A  L   M + G+  +   +
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTF 244

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM  
Sbjct: 245 TTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304

Query: 249 RGL 251
           +GL
Sbjct: 305 KGL 307


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    D+  Y  ++ G+C E + +++   L++M  +G   N +    ++ +    G 
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL +ML      +VVTF +LI+ LC+ GL+  AID   +MP  G  PN   Y  
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNP 384

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK+  ++RA    + M  R   PD   Y  ++    K    ++A+ + N+++  G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L  Y +++ GL++ G   +A  L  EM  + + PD I   SL+      G +DEAI
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504

Query: 241 ELQNEMMGRGL 251
           +  +E    G+
Sbjct: 505 KFFHEFERMGV 515



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 128/282 (45%), Gaps = 35/282 (12%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  Y TI+  LC   K + +  +L  M +     + +  T L++A  +     +A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQA 258

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN---------- 114
           + LLDEM D      VVT+ VL++G+CK G + EAI +   MP  G  PN          
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318

Query: 115 -------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
                                    V  +  LI+ LC+K  + RA ++ ++MPK    P+
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPN 378

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
           + +Y  L+ G+ K +    A+    RM   G   D+  Y +++  L + G +++A  + +
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           ++  +G  P  I   +++    + G   +AI+L +EM  + L
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 112/236 (47%), Gaps = 3/236 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T+I G C   K   +  +L  ++ +G   + +    ++  Y KAGE + ALS+LD M   
Sbjct: 142 TLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM--- 198

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +   VVT+  ++  LC SG +++A++   RM     +P+V  YT LI+  C+ + + +A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQA 258

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L DEM  R   PD   Y  L++G  K     EA+   N M   G   ++  +  ++  
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +   G   +A  L  +M+ +G  P  +    L+     +G +  AI++  +M   G
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 115/252 (45%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K     +  +  +I  LC +     +  +L +M ++G   N++    L+  + K  +   
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDR 397

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+  L+ M+       +VT+  ++  LCK G V +A++   ++   G  P +  Y  +ID
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K     +A  L DEM  +D+ PDT  Y++L+ G  +     EA+   +    +GV  
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRP 517

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   + S++ GL +      A      MI RG  P E     L++     G   EA+EL 
Sbjct: 518 NAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELL 577

Query: 244 NEMMGRGLLSGS 255
           NE+  +GL+  S
Sbjct: 578 NELCNKGLMKRS 589



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 3/227 (1%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + E+    L  M  +G   + + CTTL+  + + G+  +A  +L+ +  S     V+T+ 
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYN 176

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+I G CK+G +  A+    RM    + P+V  Y  ++  LC    +++A  + D M +R
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           D  PD   YT LI+   +     +A+ L + M + G   D+  Y  LV G+ + G L EA
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               ++M   G  P+ I    +L+     G   +A +L  +M+ +G 
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 3/250 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++G     D+  Y  +I G C   +  ++  +L  M    ++ + V   T++ +   +G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +LD ML       V+T+ +LI+  C+   V +A+     M D G  P+V  Y  
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G+CK+  ++ A    ++MP     P+   +  ++        + +A  L   M   G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  +  L+  L R G L  A  +  +M   G  P+ +    LL    +   MD AI
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 241 ELQNEMMGRG 250
           E    M+ RG
Sbjct: 400 EYLERMVSRG 409



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 3/194 (1%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           + GE  E    L+ M+       ++    LI G C+ G  R+A      +   G  P+V 
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVI 173

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y  +I G CK   I  A ++ D M    + PD   Y  ++         K+A+ + +RM
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            +     D+  YT L+    R   + +A  L  EM  RG  PD +    L+    + G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290

Query: 237 DEAIELQNEMMGRG 250
           DEAI+  N+M   G
Sbjct: 291 DEAIKFLNDMPSSG 304



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 35/187 (18%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y T++  LC + K ED+  +L+++   G +   +   T++D   KAG+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV--- 117
             +A+ LLDEM    ++   +T+  L+ GL + G V EAI +F      G+ PN      
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNS 524

Query: 118 --------------------------------YTALIDGLCKKNCIERARNLFDEMPKRD 145
                                           YT LI+GL  +   + A  L +E+  + 
Sbjct: 525 IMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584

Query: 146 MIPDTTA 152
           ++  ++A
Sbjct: 585 LMKRSSA 591



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 3/161 (1%)

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L ++G + E   +   M   G  P++   T LI G C+     +A  + + +     +PD
Sbjct: 112 LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPD 171

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  +I GY K      AL++ +RM+   V  D+  Y +++  L   G L++A  +  
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLD 228

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            M+ R   PD I    L++       + +A++L +EM  RG
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRG 269


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 2/247 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K ++ D   Y T+I GLC     E ++ LLSEM++  + AN    ++++ +  K  +P E
Sbjct: 75  KRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEE 134

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           +  +L+EM+ +     V  F  ++ G  +S  + +A + +  M + G  P+   Y  LI 
Sbjct: 135 SYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIH 194

Query: 124 GLCKKNCIERARNLFDEMPKR--DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           GL K   ++ +  +  EM  R    +P+   ++ LI G  +    ++AL +   M E G 
Sbjct: 195 GLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGC 254

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             +   YT+L+ GL R   + +AR LF +M    I PD +   SL+  + +RG+MDEA +
Sbjct: 255 KPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEK 314

Query: 242 LQNEMMG 248
           L  EM G
Sbjct: 315 LYREMSG 321



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 132/290 (45%), Gaps = 38/290 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMK----------------------- 37
           M+ KNI A++  Y +II  L  E+K E+S  +L EM                        
Sbjct: 107 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 166

Query: 38  ------------ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML--DSRIEVTVVTF 83
                       E+G   + V    L+    K G+  E+L +L EM    +     V+TF
Sbjct: 167 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITF 226

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             LI GLC++G + +A++ FG M + G  PN   YT LI GLC+   + +AR LF++M +
Sbjct: 227 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQ 286

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT-EVGVDLDLNAYTSLVWGLSRCGHLQ 202
             + PD  AY +LI GY K  S  EA  L   M+   G+   +  + +L+ G  + G L 
Sbjct: 287 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 346

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            A  L  EM  +G+  D      L+        +DEA+E+  +M  +  L
Sbjct: 347 RANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFL 396



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 105/233 (45%), Gaps = 5/233 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      ++  + T+I GLC   + E +  +   M E G   N    TTL+    +A +
Sbjct: 214 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEK 273

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD-FGLHPNVAVYT 119
             +A  L ++M  + I    V +  LI G CK G + EA   +  M    GL P +  + 
Sbjct: 274 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 333

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LIDG CK   + RA  L  EM  + +  DT  Y  LI G  +     EAL +  +M E 
Sbjct: 334 TLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREK 393

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLK 228
              LD  +  S V GL + G++ +A  +F      G +P+     IL  SL+K
Sbjct: 394 KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIK 446



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 100/195 (51%), Gaps = 1/195 (0%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNV 115
           KAG  ++AL + + M       ++VT+ VLI+  C +G   +A+D F  M  +  + P+ 
Sbjct: 22  KAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDR 81

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             Y  LI GLC     E AR L  EM  +++  +   Y+++I   +K    +E+  +   
Sbjct: 82  WTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEE 141

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           M   G + D+ A+  ++ G +R  ++++AR ++  M+  G  PD +    L+    + G 
Sbjct: 142 MMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGK 201

Query: 236 MDEAIELQNEMMGRG 250
           +DE++++ +EM  R 
Sbjct: 202 LDESLKILSEMAMRA 216



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 1/166 (0%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           ++  L K+G++ +A++ F  M      P++  Y  LI+  C      +A +LF  M +  
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 146 MI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   Y  LI G     + + A  L + M +  +  ++  Y+S++  L +    +E+
Sbjct: 76  RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +  EM+  G  PD      +++      NM++A E+   M+  G
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESG 181



 Score = 58.5 bits (140), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 66/144 (45%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  ++  +  + T+I G C   K   +  L++EM   GL A+T     L+    +A +  
Sbjct: 322 GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLD 381

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL +  +M + +  +  V+    + GLCK+G + +A   F      G  PN   +  L 
Sbjct: 382 EALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILS 441

Query: 123 DGLCKKNCIERARNLFDEMPKRDM 146
           + L K   +E A+ L +    RD+
Sbjct: 442 ESLIKLGRVEDAQKLMEPAKARDI 465


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 119/239 (49%), Gaps = 1/239 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y T+I   C E     +      ++E+G+  +T  C  L+  Y + G+  +A  LL
Sbjct: 182 DTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLL 241

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M          ++ +LI GLC++  VREA+     M   G  PN+  YT LI GLCK+
Sbjct: 242 MMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKE 301

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I  AR L DEMP+R ++P    Y A+IDGY K    K+AL +K  M   G + D   Y
Sbjct: 302 GRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTY 361

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            SL+ GL   G   EA  L +  I RG  P  I   +++  + +   +D+A+ +++ M+
Sbjct: 362 NSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMI 419



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 116/239 (48%), Gaps = 3/239 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I+GL  + K   +  L+++M+E+G+T   +  TTL+    K  E   A  L + M 
Sbjct: 500 YSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMME 559

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + +      + VL D LCKSG   EA  +  +    G+      YT+L+DG  K    E
Sbjct: 560 QNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKK---GVVLTKVTYTSLVDGFSKAGNTE 616

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L ++M       D+  Y+ L+    K +   EAL++ ++MT  GV  ++ AYT ++
Sbjct: 617 FAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIII 676

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             + + G    A+ +F+EMI  G  P  I     +  + + G ++EA  L  EM   G+
Sbjct: 677 SEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGV 735



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 1/220 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G     D   Y ++I GLC   K ++++ LL+     G +   +  T +++ Y KA +
Sbjct: 349 MEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEK 407

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL +   M+ S+ ++ +  + VLI  L K   ++EA D    +   GL PNV +YT+
Sbjct: 408 IDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTS 467

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  CK   +  A  +F         P+   Y++LI G ++ +   +A+ L  +M E G
Sbjct: 468 IIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG 527

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +   +  YT+L+ G  +      A  LF  M   G+ PDE
Sbjct: 528 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDE 567



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 3/247 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I   +  Y T+I G C + +F+++  L   M++NGLT +      L DA  K+G 
Sbjct: 523 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR 582

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S L   +   + +T VT+  L+DG  K+G    A     +M + G   +   Y+ 
Sbjct: 583 AEEAYSFL---VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSV 639

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+  LCK+  +  A ++ D+M  R +  +  AYT +I   +K      A ++ N M   G
Sbjct: 640 LLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 699

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                  YT  +    + G ++EA  L  EM   G+ PD +     +      G MD A 
Sbjct: 700 HKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAF 759

Query: 241 ELQNEMM 247
                M+
Sbjct: 760 STLKRMI 766



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 34/277 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG--------- 59
           +L  Y  +I GLC E +  D+++LL EM   G+  +      ++D Y K+G         
Sbjct: 287 NLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIK 346

Query: 60  -------------------------EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
                                    +P EA  LL+  +      TV+TF  +I+G CK+ 
Sbjct: 347 TLMEGNGCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAE 406

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + +A+     M       ++  Y  LI  L KK+ ++ A++  +E+    + P+   YT
Sbjct: 407 KIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYT 466

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           ++ID Y K      AL +       G   +   Y+SL++GL +   L +A  L  +M   
Sbjct: 467 SIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 526

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           GI P  I   +L++   ++   D A  L   M   GL
Sbjct: 527 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 563



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 16/253 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y   I   C   + E++  L+ EM+ NG+  + V     ++     G    A S L  M+
Sbjct: 707 YTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMI 766

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVR-EAIDYFG---------------RMPDFGLHPNVA 116
           D+  E    T+ +L+    K  L     +D  G               RM   GL+P   
Sbjct: 767 DASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAV 826

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y+++I G CK   +E A  L D M  +D+ P+   YT LI      + F++A +    M
Sbjct: 827 TYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNM 886

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G    L +Y  L+ GL   G   +A+ LF +++      +E+    L     + G++
Sbjct: 887 IECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHV 946

Query: 237 DEAIELQNEMMGR 249
           D   +L + M  R
Sbjct: 947 DICSQLLSAMENR 959



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 19/249 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  KAD   Y  ++  LC + K  ++  +L +M   G+  N V  T ++    K G+
Sbjct: 625 MVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGK 684

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A S+ +EM+ S  + + +T+ V I   CK G + EA    G M   G+ P+V  Y  
Sbjct: 685 HDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNV 744

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+G      ++ A +    M      P+   Y  L+  +LK       ++L N      
Sbjct: 745 FINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLK-------MSLANAHY--- 794

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           VD      TS +W   +   L     L   M+  G+ P  +   S++    +   ++EA 
Sbjct: 795 VD------TSGMWNWIK---LDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEAC 845

Query: 241 ELQNEMMGR 249
            L + M+G+
Sbjct: 846 VLLDHMLGK 854



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 84/193 (43%)

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           E  +A+  +      R+ ++   + + +  L +  +       + ++   GL P+   Y 
Sbjct: 128 EAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYN 187

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I   CK+  +  A   F  + +  M  DT    AL+ GY +    ++A  L   M  +
Sbjct: 188 TMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLM 247

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   +  +YT L+ GL     ++EA VL   M+  G  P+      L++   + G + +A
Sbjct: 248 GCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDA 307

Query: 240 IELQNEMMGRGLL 252
             L +EM  RG++
Sbjct: 308 RVLLDEMPRRGVV 320


>gi|260780548|gb|ACX50820.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 183

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 96/180 (53%), Gaps = 1/180 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+     +  +I GLC E K  +   +   M   G   N  I T L+D Y K+G   +
Sbjct: 1   KGIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVED 60

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ LL  M+D   +  VVTF V+++GLCK+G V EA+DYF      GL  N   Y++LID
Sbjct: 61  AIRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLID 120

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVD 182
           GL K   I+ A  LF+EM ++    D+  Y ALID + KH    EA+ L  RM  E G D
Sbjct: 121 GLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEKEEGCD 180



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 84/171 (49%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  K   +E A 
Sbjct: 3   IQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAI 62

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L   M      PD   ++ +++G  K+   +EAL+        G+ ++   Y+SL+ GL
Sbjct: 63  RLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGL 122

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + G + EA  LF EM  +G   D     +L+    + G +DEA+ L   M
Sbjct: 123 GKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 78/155 (50%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           K G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V 
Sbjct: 19  KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVV 78

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            ++ +++GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M
Sbjct: 79  TFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 138

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +E G   D   Y +L+   ++ G + EA  LF  M
Sbjct: 139 SEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 72/141 (51%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+      ++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K  + ++A
Sbjct: 2   GIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDA 61

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           + L +RM + G   D+  ++ +V GL + G ++EA   F      G+  + +   SL+  
Sbjct: 62  IRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDG 121

Query: 230 HYERGNMDEAIELQNEMMGRG 250
             + G +DEA  L  EM  +G
Sbjct: 122 LGKAGRIDEAERLFEEMSEKG 142



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 50/106 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  +  ++ GLC   + E++       + NGL  N++  ++L+D   KAG 
Sbjct: 68  MIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGR 127

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
             EA  L +EM +         +  LID   K G V EA+  F RM
Sbjct: 128 IDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 173


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 131/275 (47%), Gaps = 22/275 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   Y T++ G C + K  ++K +L+EM   G   NT  C TL+++ +K G 
Sbjct: 389 MVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGR 448

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------------PD 108
            SEA  +L +M +   ++  VT  ++++GLC++G + +A +    M            P 
Sbjct: 449 KSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPV 508

Query: 109 FGL----H------PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
            GL    H      P+V  YT LI+GLCK   +E A+  F EM  +++ PD+  Y   + 
Sbjct: 509 AGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVL 568

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
            + K      AL +   M   G    L  Y SL+ GL   G + E   L  EM  RGI P
Sbjct: 569 NFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHP 628

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           D     +++    E G   +A  L +EM+ +G++S
Sbjct: 629 DICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVS 663



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 119/239 (49%), Gaps = 4/239 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y T++   C +   ++++ L+  M E GL  + V   + + A  +AG+  EA  +  +M
Sbjct: 221 VYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDM 280

Query: 72  -LDSRI---EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            +D  +   +  VVTF +++ G C+ G++ EA      M   G   ++  Y   + GL +
Sbjct: 281 QMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLR 340

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +   R++ DEM +  + P+  +Y  ++DG  ++    +A  L + M   GV  D   
Sbjct: 341 NGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVT 400

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           YT+L+ G    G + EA+ + +EMI +G  P+   C +LL   ++ G   EA E+  +M
Sbjct: 401 YTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKM 459



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 118/247 (47%), Gaps = 18/247 (7%)

Query: 14  GTIIWGLCIESK------FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           G ++ G C   +      F D K+        G   N V+  TL+ ++ K     EA  L
Sbjct: 190 GILVRGFCRAGRTKQALEFVDGKM--------GGNVNRVVYNTLVSSFCKQDMNDEAEKL 241

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP---DFGL-HPNVAVYTALID 123
           ++ M +  +   VVTF   I  LC++G V EA   F  M    + GL  PNV  +  ++ 
Sbjct: 242 VERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLK 301

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C++  +E AR+L + M K        +Y   + G L++    E  ++ + M E G++ 
Sbjct: 302 GFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEP 361

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++ +Y  ++ GL R   + +AR L   M+  G+ PD +   +LL  +  +G + EA  + 
Sbjct: 362 NIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAIL 421

Query: 244 NEMMGRG 250
           NEM+ +G
Sbjct: 422 NEMIRKG 428



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 22/267 (8%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  +  ++ G C E   E+++ L+  MK+ G   +     T +    + G+  E  S
Sbjct: 290 KPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRS 349

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +LDEM+++ IE  + ++ +++DGLC++ ++ +A      M   G++P+   YT L+ G C
Sbjct: 350 VLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYC 409

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            K  +  A+ + +EM ++   P+T     L++   K     EA  +  +M E    LD  
Sbjct: 410 SKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTV 469

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGI----------------------LPDEILCI 224
               +V GL R G L++A  +  EM   G                       +PD I   
Sbjct: 470 TCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYT 529

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
           +L+    + G ++EA +   EMM + L
Sbjct: 530 TLINGLCKVGKLEEAKKKFIEMMAKNL 556



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 89/201 (44%), Gaps = 7/201 (3%)

Query: 54  AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
           +  +   P    SL  +M+ + +     TF +LI  LC+S  +  A + F +M + G  P
Sbjct: 125 SSLQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQP 184

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           N      L+ G C+    ++A    D   K     +   Y  L+  + K +   EA  L 
Sbjct: 185 NKFTVGILVRGFCRAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLV 242

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL----PDEILCISLLKK 229
            RMTE G+  D+  + S +  L R G + EA  +F +M   G L    P+ +    +LK 
Sbjct: 243 ERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKG 302

Query: 230 HYERGNMDEAIELQNEMMGRG 250
             + G M+EA  L  E M +G
Sbjct: 303 FCQEGMMEEARSLV-ETMKKG 322



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 2/196 (1%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           L  Y ++I GL  + +  +   L+ EM+E G+  +      +++   + G+  +A SLL 
Sbjct: 595 LQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLH 654

Query: 70  EMLDSRI-EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           EMLD  +    V +F +LI   CKSG  + A + F        H   A+Y+ + + L   
Sbjct: 655 EMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKE-ALYSLMFNELLAG 713

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A+ LF+   +R ++     Y  LID   K     +A  L  ++ + G   D +++
Sbjct: 714 GKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSF 773

Query: 189 TSLVWGLSRCGHLQEA 204
             ++ GLS+ G+ Q+A
Sbjct: 774 IPVIDGLSKRGNKQQA 789



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/228 (21%), Positives = 96/228 (42%), Gaps = 43/228 (18%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++M + G+   T     L+ +  ++     A  L D+M +   +    T  +L+ G C
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 92  KSGLVREAIDYF-GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           ++G  ++A+++  G+M   G + N  VY  L+   CK++  + A  L + M ++ ++PD 
Sbjct: 198 RAGRTKQALEFVDGKM---GGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDV 254

Query: 151 TAYTA---------------------------------------LIDGYLKHESFKEALN 171
             + +                                       ++ G+ +    +EA +
Sbjct: 255 VTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARS 314

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           L   M + G  + L +Y + + GL R G L E R +  EM+  GI P+
Sbjct: 315 LVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPN 362



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 2/150 (1%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M   G++P    +  LI  LC+ N ++ AR LFD+M ++   P+      L+ G+ +
Sbjct: 139 YTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCR 198

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               K+AL   +   ++G +++   Y +LV    +     EA  L   M  +G+LPD + 
Sbjct: 199 AGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVT 256

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             S +      G + EA  +  +M   G L
Sbjct: 257 FNSRISALCRAGKVFEASRIFRDMQMDGEL 286


>gi|224576651|gb|ACN56999.1| At1g03560-like protein [Capsella grandiflora]
          Length = 207

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      G   N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F          ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDH--- 177

Query: 234 GNMDEAIELQNEMMGRGL 251
              +EA++L + M+ +G+
Sbjct: 178 -RNEEALKLWDMMIDKGI 194



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 1/192 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        +   +  + +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCRFNGFAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            L K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + G+ 
Sbjct: 136 ALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGIT 195

Query: 183 LDLNAYTSLVWG 194
                + +L  G
Sbjct: 196 PTAACFRALSTG 207



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 1/160 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NG   N++  ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGFAINSMFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
            LI G+ K +  E A  L+D M  + + P    + AL  G
Sbjct: 168 ILISGMFKDHRNEEALKLWDMMIDKGITPTAACFRALSTG 207


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 120/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G C +    D+  +L +    G   +     +L++ + + G+P +A+++  + L
Sbjct: 403 YNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGL 462

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +++ +  LI GLC+ GL+  A+     M + G  P++  Y  +I+GLCK  C+ 
Sbjct: 463 GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLS 522

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L  +   +  IPD   Y  L+DGY +      A+ L NRM   G+  D+  Y +L+
Sbjct: 523 DANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL 582

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +    +E   +F  M  +G  P+ I   ++++       ++EA++L  EM  +GL
Sbjct: 583 NGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGL 641



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K +++D+  Y   I   C   +   +  LL  M   G  +N V   T++  +++ G+
Sbjct: 216 MKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGD 275

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L DEML+  +   V TF  L+  LCK G V E+   F ++   G+ PN+  +  
Sbjct: 276 NDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNI 335

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I GLCK+  ++RA  L   + +  + PD   Y  +I G  +     EA    ++M   G
Sbjct: 336 FIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGG 395

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + +   Y S++ G  + G + +A  +  + + +G  PDE    SL+    + G+ D+A+
Sbjct: 396 FEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAM 455

Query: 241 ELQNEMMGRGL 251
            +  + +G+GL
Sbjct: 456 AVFKDGLGKGL 466



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 112/238 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G       + ++ L  EM E  L  +      L+ A  K G   E+  L D++L
Sbjct: 263 YCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVL 322

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   + TF + I GLCK G +  A+   G +   GL P+V  Y  +I GLC+K+ + 
Sbjct: 323 KRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVV 382

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A     +M      P+   Y ++IDGY K     +A  +       G   D   Y SLV
Sbjct: 383 EAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLV 442

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  + G   +A  +F + +G+G+ P  I+  +L+K   ++G +  A++L NEM  +G
Sbjct: 443 NGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  Y  II GLC      D+  L+ +    G   +     TL+D Y +  +
Sbjct: 496 MAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLK 555

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L++ M    +   V+T+  L++GLCK+    E ++ F  M + G  PN+  Y  
Sbjct: 556 LDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNT 615

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           +I+ LC    +  A +L  EM  + + PD  ++  LI G+ K      A  L   M  + 
Sbjct: 616 IIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQY 675

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            V      Y  ++   S   +++ A  LF EM   G  PD      L+    + GN+++ 
Sbjct: 676 DVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQG 735

Query: 240 IELQNEMMGRGLL 252
            +   E + +G +
Sbjct: 736 YKFLLENIEKGFI 748



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 114/239 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K D   Y +++ G C +   + +  +  +    GL  + ++  TL+    + G    
Sbjct: 429 KGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILP 488

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L++EM +   +  + T+ ++I+GLCK G + +A    G     G  P++  Y  L+D
Sbjct: 489 ALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVD 548

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C++  ++ A  L + M  + M PD   Y  L++G  K    +E + +   MTE G   
Sbjct: 549 GYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP 608

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           ++  Y +++  L     + EA  L  EM  +G+ PD +   +L+    + G++D A  L
Sbjct: 609 NIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGL 667



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 36/249 (14%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T++ G C + K + +  L++ M   G+T + +   TL++   K  +  E + + 
Sbjct: 539 DIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIF 598

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M +      ++T+  +I+ LC S  V EA+D  G M   GL P+V  +  LI G CK 
Sbjct: 599 KAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKV 658

Query: 129 NCIERARNLFDEMPKRDMIPDTTA-YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
             ++ A  LF  M K+  +  TTA Y  +I  + +  + K AL L + M + G D D   
Sbjct: 659 GDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYT 718

Query: 188 YTSLVWGLSRCGHL-----------------------------------QEARVLFHEMI 212
           Y  L+ G  + G++                                   QEA  + H M+
Sbjct: 719 YRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMV 778

Query: 213 GRGILPDEI 221
            + I+PD +
Sbjct: 779 QKDIVPDTV 787



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 1/249 (0%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++  + +Y T+I GLC +     +  L++EM E G   +      +++   K G  S
Sbjct: 463 GKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLS 522

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L+ + +       + T+  L+DG C+   +  AI+   RM   G+ P+V  Y  L+
Sbjct: 523 DANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL 582

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +GLCK    E    +F  M ++   P+   Y  +I+     +   EA++L   M   G+ 
Sbjct: 583 NGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLT 642

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY-ERGNMDEAIE 241
            D+ ++ +L+ G  + G L  A  LF  M  +  +       +++   + E+ NM  A+ 
Sbjct: 643 PDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALR 702

Query: 242 LQNEMMGRG 250
           L +EM   G
Sbjct: 703 LFSEMKKNG 711



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 117/278 (42%), Gaps = 35/278 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +  ++  LC +    +S+ L  ++ + G+  N       +    K G    A+ LL
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLL 353

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    +   VVT+  +I GLC+   V EA +   +M + G  PN   Y ++IDG CKK
Sbjct: 354 GCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKK 413

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH-------ESFKE------------- 168
             +  A  +  +   +   PD   Y +L++G+ +          FK+             
Sbjct: 414 GMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVY 473

Query: 169 ---------------ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
                          AL L N M E G   D+  Y  ++ GL + G L +A  L  + I 
Sbjct: 474 NTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAIT 533

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +G +PD     +L+  +  +  +D AIEL N M  +G+
Sbjct: 534 KGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGM 571



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 109/242 (45%), Gaps = 5/242 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDA---YFKAGE 60
           +  K  L  Y +++  L    KF + + LLSEM+ N    NT++    ++A   Y + G+
Sbjct: 113 QGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN--LDNTLLEGVYVEAMRFYGRKGK 170

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+   + M     + +V ++  +++ L + G   +A   + RM D  +  +V  YT 
Sbjct: 171 IQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTI 230

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I   C+      A  L   MP      +  AY  ++ G+ +      A  L + M E  
Sbjct: 231 RIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECC 290

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  +  LV  L + G + E+  LF +++ RG+ P+       ++   + G++D A+
Sbjct: 291 LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAV 350

Query: 241 EL 242
            L
Sbjct: 351 RL 352



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 91/202 (45%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
            +M+   + G  ++A  +   M D ++E  V T+ + I   C++G    A+     MP  
Sbjct: 195 AIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVL 254

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G   N   Y  ++ G  +    +RAR LFDEM +  + PD T +  L+    K     E+
Sbjct: 255 GCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLES 314

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L +++ + GV  +L  +   + GL + G L  A  L   +   G+ PD +   +++  
Sbjct: 315 ERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICG 374

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
              +  + EA E  ++M+  G 
Sbjct: 375 LCRKSRVVEAEECLHKMVNGGF 396



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 1/179 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  Y TII  LC   K  ++  LL EMK  GLT + V   TL+  + K G+
Sbjct: 601 MTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGD 660

Query: 61  PSEALSLLDEMLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              A  L   M     +  T  T+ ++I    +   ++ A+  F  M   G  P+   Y 
Sbjct: 661 LDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYR 720

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            LIDG CK   + +      E  ++  IP  T +  +++        +EA+ + + M +
Sbjct: 721 VLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQ 779



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 84/170 (49%), Gaps = 3/170 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
           MK K +  D+  +GT+I G C     + +  L   M K+  ++  T     ++ A+ +  
Sbjct: 636 MKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQL 695

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
               AL L  EM  +  +    T+ VLIDG CK+G V +   +     + G  P++  + 
Sbjct: 696 NMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFG 755

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDT--TAYTALIDGYLKHESFK 167
            +++ LC ++ ++ A  +   M ++D++PDT  T + A   G++ + +++
Sbjct: 756 RVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVNTIFEADKKGHITYHAYE 805


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 132/243 (54%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + +II  LC   K  +  LLL EM+E  +  N V  TTL+D+ FKA     AL+L 
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 317

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+   I V +V + VL+DGL K+G +REA   F  + +    PNV  YTAL+DGLCK 
Sbjct: 318 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 377

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  +  +M ++ +IP+   Y+++I+GY+K    +EA++L  +M +  V  +   Y
Sbjct: 378 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 437

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ GL + G  + A  L  EM   G+  +  +  +L+      G + E   L  +M+ 
Sbjct: 438 GTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 497

Query: 249 RGL 251
           +G+
Sbjct: 498 KGV 500



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 126/239 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++  L   + +  +  L S+M   G+  + V+ T LMD  FKAG+  EA      +L
Sbjct: 297 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 356

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      VVT+  L+DGLCK+G +  A     +M +  + PNV  Y+++I+G  KK  +E
Sbjct: 357 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 416

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L  +M  ++++P+   Y  +IDG  K    + A+ L   M  +GV+ +     +LV
Sbjct: 417 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 476

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L R G ++E + L  +M+ +G+  D+I   SL+   ++ G+ + A+    EM  RG+
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 535



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 7/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ + I  D   Y T+I GLC     +++   LSEM + G+  +TV   TL+D + K G 
Sbjct: 152 LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN 211

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L+DE+     E+ ++T  +L+        + EA   +  M   G  P+V  +++
Sbjct: 212 FVRAKALVDEI----SELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSS 264

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LCK   +     L  EM +  + P+   YT L+D   K   ++ AL L ++M   G
Sbjct: 265 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 324

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + +DL  YT L+ GL + G L+EA   F  ++    +P+ +   +L+    + G++  A 
Sbjct: 325 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 384

Query: 241 ELQNEMMGRGLL 252
            +  +M+ + ++
Sbjct: 385 FIITQMLEKSVI 396



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  +  ++     +   E    L  +MK  G+  + + C  ++    + G+
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +L++M+   I   + T+ + +D   K             +  +G+  +  VY  
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK    ++A  +  +M  R  IPDT  + +L+ GY      ++AL+  + M E G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +++ GLS  G ++E      EM  RG+ PD+    +L+    + GNM  ++
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 803

Query: 241 ELQNEMMGRGLL 252
            +  EM+  GL+
Sbjct: 804 TIYCEMIADGLV 815



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 28/269 (10%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKE--------------------------- 38
           I  D   Y T+I G C    F  +K L+ E+ E                           
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMV 251

Query: 39  -NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
            +G   + V  +++++   K G+  E   LL EM +  +    VT+  L+D L K+ + R
Sbjct: 252 MSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYR 311

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            A+  + +M   G+  ++ VYT L+DGL K   +  A   F  + + + +P+   YTAL+
Sbjct: 312 HALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALV 371

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DG  K      A  +  +M E  V  ++  Y+S++ G  + G L+EA  L  +M  + ++
Sbjct: 372 DGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVV 431

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEM 246
           P+     +++   ++ G  + AIEL  EM
Sbjct: 432 PNGFTYGTVIDGLFKAGKEEMAIELSKEM 460



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 11/247 (4%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +  D  L+ ++I    +     D   L+ S+M   G++ +      L+ ++ K G  S A
Sbjct: 89  VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 148

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +SLL   +   I +  VT+  +I GLC+ GL  EA  +   M   G+ P+   Y  LIDG
Sbjct: 149 ISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG 205

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK     RA+ L DE+ + ++I     +T L+  Y    + +EA      M   G D D
Sbjct: 206 FCKVGNFVRAKALVDEISELNLI----THTILLSSYYNLHAIEEAY---RDMVMSGFDPD 258

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  ++S++  L + G + E  +L  EM    + P+ +   +L+   ++      A+ L +
Sbjct: 259 VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 318

Query: 245 EMMGRGL 251
           +M+ RG+
Sbjct: 319 QMVVRGI 325



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 13/226 (5%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK    +Y T+I  LC     + + +++ +M+  G   +TV   +LM  YF      +AL
Sbjct: 674 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 733

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S    M+++ I   V T+  +I GL  +GL++E   +   M   G+ P+   Y ALI G 
Sbjct: 734 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQ 793

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   ++ +  ++ EM    ++P T+ Y  LI  +       +A  L   M + GV  + 
Sbjct: 794 AKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNT 853

Query: 186 NAYTSLVWGLSR-CGH-----------LQEARVLFHEMI-GRGILP 218
           + Y +++ GL + C H           L EA+ L  EM+  +G +P
Sbjct: 854 STYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 899



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 1/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC       ++ ++++M E  +  N V  +++++ Y K G   EA+SLL +M 
Sbjct: 367 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +     T+  +IDGL K+G    AI+    M   G+  N  +  AL++ L +   I+
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 486

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + L  +M  + +  D   YT+LID + K    + AL     M E G+  D+ +Y  L+
Sbjct: 487 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 546

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G+ + G +  A   +  M  +GI PD      ++    ++G+ +  ++L ++M   G+
Sbjct: 547 SGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 604



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 4/194 (2%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           F+  + LLS     G+  +  +  TL+    K G   +A  ++ +M         VTF  
Sbjct: 663 FKTHETLLSY----GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNS 718

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+ G      VR+A+  +  M + G+ PNVA Y  +I GL     I+       EM  R 
Sbjct: 719 LMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 778

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           M PD   Y ALI G  K  + K ++ +   M   G+    + Y  L+   +  G + +AR
Sbjct: 779 MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 838

Query: 206 VLFHEMIGRGILPD 219
            L  EM  RG+ P+
Sbjct: 839 ELLKEMGKRGVSPN 852



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 108/251 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   IK  L     ++  LC   K E++  +L++M    +  N       +D   K   
Sbjct: 599 MKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR 658

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                   + +L   I+++   +  LI  LCK G+ ++A    G M   G  P+   + +
Sbjct: 659 ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNS 718

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G    + + +A + +  M +  + P+   Y  +I G       KE     + M   G
Sbjct: 719 LMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 778

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +L+ G ++ G+++ +  ++ EMI  G++P       L+ +    G M +A 
Sbjct: 779 MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 838

Query: 241 ELQNEMMGRGL 251
           EL  EM  RG+
Sbjct: 839 ELLKEMGKRGV 849



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 1/244 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K++  ++  Y ++I G   +   E++  LL +M++  +  N     T++D  FKAG+   
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ L  EM    +E        L++ L + G ++E       M   G+  +   YT+LID
Sbjct: 453 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 512

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
              K    E A    +EM +R M  D  +Y  LI G LK          K  M E G++ 
Sbjct: 513 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKG-MREKGIEP 571

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  +  ++    + G  +    L+ +M   GI P  + C  ++    E G M+EAI + 
Sbjct: 572 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 631

Query: 244 NEMM 247
           N+MM
Sbjct: 632 NQMM 635



 Score = 47.0 bits (110), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 6/143 (4%)

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCI-ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
           M  FG+ P+  ++ +LI        + ++   ++ +M    + PD  A   LI  + K  
Sbjct: 84  MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 143

Query: 165 SFKEALNL-KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               A++L +NR+    + +D   Y +++ GL   G   EA     EM+  GILPD +  
Sbjct: 144 RLSFAISLLRNRV----ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY 199

Query: 224 ISLLKKHYERGNMDEAIELQNEM 246
            +L+    + GN   A  L +E+
Sbjct: 200 NTLIDGFCKVGNFVRAKALVDEI 222


>gi|260780314|gb|ACX50703.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780316|gb|ACX50704.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780320|gb|ACX50706.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780322|gb|ACX50707.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780326|gb|ACX50709.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780328|gb|ACX50710.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780334|gb|ACX50713.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780336|gb|ACX50714.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780350|gb|ACX50721.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780354|gb|ACX50723.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780356|gb|ACX50724.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780360|gb|ACX50726.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780362|gb|ACX50727.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780364|gb|ACX50728.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780366|gb|ACX50729.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780368|gb|ACX50730.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780370|gb|ACX50731.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780372|gb|ACX50732.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780374|gb|ACX50733.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780376|gb|ACX50734.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780378|gb|ACX50735.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780380|gb|ACX50736.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780382|gb|ACX50737.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780384|gb|ACX50738.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780386|gb|ACX50739.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780390|gb|ACX50741.1| AT1G03560-like protein [Capsella bursa-pastoris]
 gi|260780392|gb|ACX50742.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 199

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/192 (37%), Positives = 101/192 (52%), Gaps = 1/192 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++    ++  +I GLC + K  +   +   M   G   N  I T L+D Y K+G 
Sbjct: 8   MDEKGVQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGS 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++
Sbjct: 68  VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LIDGL K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E 
Sbjct: 128 LIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEE 187

Query: 180 GVDLDLNAYTSL 191
           G D  +  YT L
Sbjct: 188 GCDQTVYTYTIL 199



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/182 (32%), Positives = 90/182 (49%)

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           ++L  EM +  ++V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG
Sbjct: 2   VALYQEMDEKGVQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 61

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +E A  L   M      PD   Y+ +++G  K+   +EAL+        G+ ++
Sbjct: 62  YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAIN 121

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y+SL+ GL + G + EA  LF EM  +G   D     +L+    + G +DEA+ L  
Sbjct: 122 SMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFK 181

Query: 245 EM 246
            M
Sbjct: 182 RM 183



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 89/180 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM E G+     + + ++    K G+ +E  ++ + M+    +  V  + VLIDG  
Sbjct: 4   LYQEMDEKGVQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYA 63

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +AI    RM D G  P+V  Y+ +++GLCK   +E A + F       +  ++ 
Sbjct: 64  KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSM 123

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++LIDG  K     EA  L   M+E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 124 FYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 183



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M + G+     V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K
Sbjct: 5   YQEMDEKGVQVPPHVFSLVIGGLCKQGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAK 64

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             S ++A+ L +RM + G   D+  Y+ +V GL + G ++EA   F      G+  + + 
Sbjct: 65  SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMF 124

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             SL+    + G +DEA  L  EM  +G
Sbjct: 125 YSSLIDGLGKAGRIDEAERLFEEMSEKG 152


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 125/240 (52%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGTII GL  + +  D   +L+ M+E G   N  + +TL+   FK G+  EA+ L  EM 
Sbjct: 342 YGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMT 401

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E+  + +  +IDGLC+ G   +A++    M + G  PN    ++L+ G  +     
Sbjct: 402 VKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSH 461

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  ++ +M K +   +   Y+ LI G  K    KEA+ +  +M   G   D+ AY+S++
Sbjct: 462 RAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMI 521

Query: 193 WGLSRCGHLQEARVLFHEMIGRGI--LPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GLS  G +++A  L++EM+ +G    PD +    LL    ++ ++  AI+L N M+ RG
Sbjct: 522 NGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRG 581



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 121/280 (43%), Gaps = 35/280 (12%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KG +I  ++  +  +I  +C     +D+  +  +M       +     TLMD   KA   
Sbjct: 191 KGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRI 250

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA+SLLDEM       + VTF VLI+GLCK G +  A      M   G  PN   Y  L
Sbjct: 251 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTL 310

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTA----------------------------- 152
           I GLC K  +E+A +L D M     +P+                                
Sbjct: 311 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGY 370

Query: 153 ------YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
                 Y+ LI G  K    +EA++L   MT  G +L+   Y++++ GL R G   +A  
Sbjct: 371 CVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVE 430

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +  EM  +G  P+   C SL+K  +E GN   A+E+  +M
Sbjct: 431 VLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDM 470



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 3/206 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I GLC + K +D+  +LSEM   G T N   C++LM  +F+AG    A+ +  +M
Sbjct: 411 VYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDM 470

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
                    V + VLI GLCK G V+EA+  + +M   G  P+V  Y+++I+GL     +
Sbjct: 471 AKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLV 530

Query: 132 ERARNLFDEM--PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
           E A  L++EM     D  PD   Y  L++   K  S   A++L N M + G D DL   T
Sbjct: 531 EDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCT 590

Query: 190 SLVWGL-SRCGHLQEARVLFHEMIGR 214
             +  L  +    Q+ R    E++ R
Sbjct: 591 IFLRMLREKLDPPQDGREFLDELVVR 616



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 119/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC++ K E +  LL  M  +    N V   T+++   K G   +   +L  M 
Sbjct: 307 YNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALME 366

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +    V    +  LI GL K G  +EA+  F  M   G   N  VY+A+IDGLC+    +
Sbjct: 367 ERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPD 426

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +  EM  +   P+    ++L+ G+ +  +   A+ +   M +     +   Y+ L+
Sbjct: 427 DAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLI 486

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL + G ++EA +++ +M+G+G  PD +   S++      G +++A++L NEM+ +G
Sbjct: 487 HGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQG 544



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 39/238 (16%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-- 107
           +L++ Y   G+      +LD M   +  +    F V+     K+ L  +A+D F RM   
Sbjct: 95  SLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRMACE 154

Query: 108 ---------------------------DFGLH----------PNVAVYTALIDGLCKKNC 130
                                      +F  H          PNV  +  +I  +CK   
Sbjct: 155 FECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGL 214

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           ++ A  +F +M  R   PD   Y  L+DG  K +   EA++L + M   G       +  
Sbjct: 215 VDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV 274

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           L+ GL + G L  A  L   M  +G +P+E+   +L+     +G +++AI L + M+ 
Sbjct: 275 LINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVS 332


>gi|260780546|gb|ACX50819.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 182

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 67/166 (40%), Positives = 91/166 (54%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC E K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+
Sbjct: 9   FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMI 68

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D   +  VVTF V+++GLCK+G V EA+DYF      GL  N   Y++LIDGL K   I+
Sbjct: 69  DEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRID 128

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            A  LF+EM ++    D+  Y ALID + KH    EA+ L  RM E
Sbjct: 129 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 174



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 84/171 (49%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  K   +E A 
Sbjct: 2   IQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAI 61

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L   M      PD   ++ +++G  K+   +EAL+        G+ ++   Y+SL+ GL
Sbjct: 62  RLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGL 121

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + G + EA  LF EM  +G   D     +L+    + G +DEA+ L   M
Sbjct: 122 GKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 172



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 78/155 (50%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           K G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V 
Sbjct: 18  KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDAIRLLHRMIDEGFKPDVV 77

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            ++ +++GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M
Sbjct: 78  TFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 137

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +E G   D   Y +L+   ++ G + EA  LF  M
Sbjct: 138 SEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRM 172



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 72/141 (51%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+      ++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K  + ++A
Sbjct: 1   GIQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGNVEDA 60

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           + L +RM + G   D+  ++ +V GL + G ++EA   F      G+  + +   SL+  
Sbjct: 61  IRLLHRMIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDG 120

Query: 230 HYERGNMDEAIELQNEMMGRG 250
             + G +DEA  L  EM  +G
Sbjct: 121 LGKAGRIDEAERLFEEMSEKG 141



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 51/108 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  +  ++ GLC   + E++       + NGL  N++  ++L+D   KAG 
Sbjct: 67  MIDEGFKPDVVTFSVVVNGLCKNGRVEEALDYFQTCQFNGLAINSMFYSSLIDGLGKAGR 126

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
             EA  L +EM +         +  LID   K G V EA+  F RM +
Sbjct: 127 IDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEAMTLFKRMEE 174


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 1/227 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+  + +Y TII  LC      D+  L +EM   G+  N V   +L+      G 
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL +M++ +I   VVTF  LID   K G + EA   +  M    + P++  Y++
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C  + ++ A+++F+ M  +D  P+   Y  LI G+ K +   E + L   M++ G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +  +   YT+L+ G  +      A+++F +M+  G+LPD I+  S+L
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD-IMTYSIL 472



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 125/249 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GL   ++  ++  L+  M   G   + V    +++   K G+   ALS
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL +M   +IE  VV +  +ID LC    V +A++ F  M + G+ PNV  Y +LI  LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L  +M +R + P+   ++ALID ++K     EA  L + M +  +D D+ 
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ G      L EA+ +F  MI +   P+ +   +L+K   +   +DE +EL  EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422

Query: 247 MGRGLLSGS 255
             RGL+  +
Sbjct: 423 SQRGLVGNT 431



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 109/219 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ ++  Y ++I  LC   ++ D+  LLS+M E  +  N V  + L+DA+ K G+
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEM+   I+  + T+  LI+G C    + EA   F  M      PNV  Y  
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++    LF EM +R ++ +T  YT LI G+ +      A  +  +M   G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  D+  Y+ L+ GL   G ++ A V+F  +    + PD
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 124/249 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  + DL  YG ++ GLC     + +  LL +M++  +    VI  T++DA       ++
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL+L  EM +  I   VVT+  LI  LC  G   +A      M +  ++PNV  ++ALID
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
              K+  +  A  L+DEM KR + PD   Y++LI+G+  H+   EA ++   M       
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y +L+ G  +   + E   LF EM  RG++ + +   +L+   ++    D A  + 
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454

Query: 244 NEMMGRGLL 252
            +M+  G+L
Sbjct: 455 KQMVSDGVL 463



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 117/246 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  D+  Y ++I G C+  + +++K +   M       N V   TL+  + KA  
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L  EM    +    VT+  LI G  ++     A   F +M   G+ P++  Y+ 
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLC    +E A  +F+ + +  M PD   Y  +I+G  K    ++  +L   ++  G
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YT+++ G  R G  +EA  LF EM   G LPD     +L++ H   G+   + 
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591

Query: 241 ELQNEM 246
           EL  EM
Sbjct: 592 ELIREM 597



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  +L  Y  +I   C  S+   +  +L++M + G   + V   +L++ +     
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A+SL+ +M++   +    TF  LI GL +     EA+    RM   G  P++  Y  
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK+  I+ A +L  +M +  + P    Y  +ID    +++  +ALNL   M   G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y SL+  L   G   +A  L  +MI R I P+ +   +L+    + G + EA 
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346

Query: 241 ELQNEMMGRGL 251
           +L +EM+ R +
Sbjct: 347 KLYDEMIKRSI 357



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 115/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  +   +KF+    L  +M+  G++ N    + L++ + +  + S AL++L +M+
Sbjct: 84  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E  +VT   L++G C    + +A+   G+M + G  P+   +  LI GL + N   
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L D M  +   PD   Y  +++G  K      AL+L  +M +  ++  +  Y +++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L    ++ +A  LF EM  +GI P+ +   SL++     G   +A  L ++M+ R +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 107/227 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +D+  L  +M ++    + V  + L+ A  K  +    +SL ++M +  I   + T+ 
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI+  C+   +  A+    +M   G  P++    +L++G C  N I  A +L  +M + 
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PD+  +  LI G  +H    EA+ L +RM   G   DL  Y  +V GL + G +  A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L  +M    I P  ++  +++       N+++A+ L  EM  +G+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 38/73 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K ++  Y T++ G C +   E++  L  EMKE G   ++    TL+ A+ + G+ + 
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA 589

Query: 64  ALSLLDEMLDSRI 76
           +  L+ EM   R 
Sbjct: 590 SAELIREMRSCRF 602


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 127/255 (49%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+ + I   +  Y  +I GL      E +++  +EM+  GL  + +   +L++ Y KAG 
Sbjct: 1216 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 1275

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EAL L  ++  + +  TV+T+ +LIDG C+ G + EA      M + G  PNV  YT 
Sbjct: 1276 LKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 1335

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L+ G      +  AR  FDEM  + + PD  AY   I   L       A  L+  +   G
Sbjct: 1336 LMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEG 1395

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +  D   Y  L+ GL + G+L++A+ L  +M+  G+ PD I    L+  H ERG + EA 
Sbjct: 1396 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREAR 1455

Query: 241  ELQNEMMGRGLLSGS 255
            ++ N M+  GLL  +
Sbjct: 1456 KIFNNMISDGLLPSA 1470



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 117/274 (42%), Gaps = 35/274 (12%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y  +I G C     E++++L  EM E G   N    T LM         + A    DEML
Sbjct: 1298 YNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEML 1357

Query: 73   -----------DSRI------------------------EVTVVTFCVLIDGLCKSGLVR 97
                       ++RI                            VT+ +LI GLCK+G ++
Sbjct: 1358 SKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLK 1417

Query: 98   EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            +A +   +M   GL P+   YT LI   C++  +  AR +F+ M    ++P    +T +I
Sbjct: 1418 DAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVII 1477

Query: 158  DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
              Y +  +   A     +M E GV+ +   Y  L+  L R G  Q A   FHEM+ RG++
Sbjct: 1478 HAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLV 1537

Query: 218  PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             ++     L+  + + GN ++A+    EM   G+
Sbjct: 1538 ANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGI 1571



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 2/198 (1%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            I +D   Y  +I GLC     +D+K L  +M  NGL  + +  T L+ A+ + G   EA 
Sbjct: 1396 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREAR 1455

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             + + M+   +  + VTF V+I   C+ G +  A  +F +M + G+ PN   Y  LI  L
Sbjct: 1456 KIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 1515

Query: 126  CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            C+    + A + F EM +R ++ +   YT LIDG  K  ++++A+     M + G+  D 
Sbjct: 1516 CRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDY 1575

Query: 186  NAYTSLVWGLSRCGHLQE 203
              + +L+ G    GH+  
Sbjct: 1576 LTHKALLKGFD--GHVHH 1591



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 7/233 (3%)

Query: 24   SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM--LDSRIEVTVV 81
            ++++D   +  EM E G+  + V   TL+D++ K G   +   LL EM    S      V
Sbjct: 1098 ARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDV 1157

Query: 82   TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
            T+ V+I GL + G + EA +    M       +   Y  LI GL  + C+++  +L  EM
Sbjct: 1158 TYNVVITGLTRKGDLEEAAELVEGM-RLSKKASSFTYNPLITGLLARGCVKKVYDLQLEM 1216

Query: 142  PKRDMIPDTTAYTALIDGYLKHESFKEALNLK-NRMTEVGVDLDLNAYTSLVWGLSRCGH 200
                ++P    Y A+I G L+     EA  +K   M  +G+  D+  Y SL+ G  + G+
Sbjct: 1217 ENEGIMPTVVTYNAMIHGLLQ-SGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 1275

Query: 201  LQEARVLFHEMIGRGILPDEILCISLLKKHYER-GNMDEAIELQNEMMGRGLL 252
            L+EA +LF ++   G+ P  +L  ++L   Y R G+++EA  L+ EM  +G L
Sbjct: 1276 LKEALLLFGDLRRAGLAP-TVLTYNILIDGYCRLGDLEEARILKEEMGEQGCL 1327



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 35/289 (12%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+   +  D+  Y +++ G C     +++ LL  +++  GL    +    L+D Y + G+
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 1310

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------ 114
              EA  L +EM +      V T+ +L+ G      +  A ++F  M   GL P+      
Sbjct: 1311 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNT 1370

Query: 115  -----------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                            Y  LI GLCK   ++ A+ L  +M    
Sbjct: 1371 RICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG 1430

Query: 146  MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            + PD   YT LI  + +    +EA  + N M   G+      +T ++    R G+L  A 
Sbjct: 1431 LQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAY 1490

Query: 206  VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
              F +M+  G+ P+EI    L+      G    A    +EM+ RGL++ 
Sbjct: 1491 GWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 1539



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 109/228 (47%), Gaps = 7/228 (3%)

Query: 22   IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV 81
            I   FE  ++L+ E    G++++TV    L+    K G   +A  L  +M+ + ++   +
Sbjct: 1381 IARAFELREVLMLE----GISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCI 1436

Query: 82   TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
            T+  LI   C+ GL+REA   F  M   GL P+   +T +I   C++  +  A   F +M
Sbjct: 1437 TYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKM 1496

Query: 142  PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
             +  + P+   Y  LI    +    + A +  + M E G+  +   YT L+ G  + G+ 
Sbjct: 1497 LEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNW 1556

Query: 202  QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE-LQNEMMG 248
            ++A   + EM   GI PD +   +LLK     G++   IE L N ++G
Sbjct: 1557 EDAMRFYFEMHQNGIHPDYLTHKALLKGF--DGHVHHTIEYLDNVILG 1602



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 3/221 (1%)

Query: 33   LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
              EM  +G+  +   C  ++     A    +  ++ +EML+  IE ++VT+  L+D   K
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 93   SGLVREAIDYFGRMPD--FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
             G   +       M     G  PN   Y  +I GL +K  +E A  L + M +      +
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASS 1190

Query: 151  TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
              Y  LI G L     K+  +L+  M   G+   +  Y +++ GL + G ++ A+V F E
Sbjct: 1191 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 1250

Query: 211  MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            M   G+LPD I   SLL  + + GN+ EA+ L  ++   GL
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGL 1291


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 129/257 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ +L  Y  ++   C   +FE ++LL  EM   G+T N V   TL+    +  +
Sbjct: 99  MRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRK 158

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL+ M    I  +VVTF +L+DG  K+G +  A+ +  +M   G  P+   Y A
Sbjct: 159 MKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNA 218

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   + RA   F +M +R + P    YT LID + +     +A  +   M + G
Sbjct: 219 LIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAG 278

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +++D+  Y  LV  L   G++++AR LF  +  +G+    ++   L+  +   G+  +A+
Sbjct: 279 LEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAM 338

Query: 241 ELQNEMMGRGLLSGSKN 257
           +L  EM  +G +  S +
Sbjct: 339 KLIMEMRKKGFVPNSAS 355



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 110/250 (44%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K  +   D+     ++ G C      +++ +   M   GLT N V  T L+  YF  G  
Sbjct: 30  KAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRR 89

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            + L+L ++M    IE  + T+ +L+   C++G    A   F  MP  G+  NV  Y  L
Sbjct: 90  EKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTL 149

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I GLC+   ++ A  L + M +  + P    +  L+DGY K      AL+  N+M   G 
Sbjct: 150 IAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGY 209

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
                 Y +L+ G  R   +  A   F +M  RG+ P ++    L+       +MD+A E
Sbjct: 210 QPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFE 269

Query: 242 LQNEMMGRGL 251
           +   M   GL
Sbjct: 270 MFAGMEKAGL 279



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 35/270 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y T+I GLC   K +D+  LL  M+  G+  + V    L+D Y KAG+
Sbjct: 134 MPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGK 193

Query: 61  PSEALSL-----------------------------------LDEMLDSRIEVTVVTFCV 85
            S AL                                       +M +  +  T VT+ +
Sbjct: 194 MSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTI 253

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LID   +   + +A + F  M   GL  +V  Y  L+  LC +  ++ AR LF  + ++ 
Sbjct: 254 LIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKG 313

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +      Y  LI GY +  S  +A+ L   M + G   +  +Y   +  L   G   EA 
Sbjct: 314 LQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAE 373

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGN 235
            L  +M+  G+   E +   LL     +G+
Sbjct: 374 ALIDDMVRAGVQTSESVRQVLLNAKARQGS 403


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  124 bits (311), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G+ +K ++ +Y  II   C +     ++ L  ++ + G+  + +  T+L+  + + G+
Sbjct: 215 MEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQ 274

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L+ EM++  I   V TF VLID  C+ G + EA   F  M   G  P++  +  
Sbjct: 275 WGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNT 334

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    +  AR LFD + +R ++PD  +YT LI GY K +   EA++L N M    
Sbjct: 335 LISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKN 394

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD+  Y+SL+ GL + G +  A  LF  +   G  P+ I    L+    +  ++D  I
Sbjct: 395 MVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGI 454

Query: 241 ELQNEMMGRGL 251
           EL   M G+GL
Sbjct: 455 ELFKLMCGKGL 465



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 119/238 (50%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T++ GLCI  + + +      +   G+  + V   TL++   K G   +A  LL EM   
Sbjct: 159 TVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQ 218

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            ++  +V + ++ID  CK  L  +A D + ++ D G+ P++  YT+LI G C+       
Sbjct: 219 VVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEV 278

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
           + L  EM  +++ P+   +  LID + +     EA  + N M + G   D+  + +L+ G
Sbjct: 279 KQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISG 338

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               G++ EAR LF  +  RGILPD      L+  + +   +DEA+ L NEM  + ++
Sbjct: 339 HCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMV 396



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 103/211 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + D+  + T+I G C+     +++ L   + E G+  +    T L+  Y K   
Sbjct: 320 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKR 379

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+SL +EM    + + +V +  LIDGLCKSG +  A + F  + + G  PNV  Y  
Sbjct: 380 IDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNI 439

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK   I+    LF  M  + + P    Y  LI+GY K +  +EA+NL + M    
Sbjct: 440 LIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKN 499

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +  D   Y SL  GL + G + +A  LF  M
Sbjct: 500 LAPDSITYNSLFDGLCKSGRISDAWELFKVM 530



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 118/250 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+  Y ++I G C   ++ + K L+ EM    +  N      L+DA+ + G+  EA 
Sbjct: 255 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQ 314

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + + M+    +  +VTF  LI G C  G V EA   F  + + G+ P+V  YT LI G 
Sbjct: 315 GMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGY 374

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   I+ A +LF+EM  ++M+ D   Y++LIDG  K      A  L + +   G   ++
Sbjct: 375 CKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNV 434

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+    +   +     LF  M G+G+ P  +    L+  + +   + EA+ L + 
Sbjct: 435 ITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSV 494

Query: 246 MMGRGLLSGS 255
           M  + L   S
Sbjct: 495 MQSKNLAPDS 504



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 108/219 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           LL +M   G+T +    +  ++ Y   GE   A S+L  +L    +   +T   ++ GLC
Sbjct: 106 LLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLC 165

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
            +G V++A+D+   +   G+  +   Y  LI+GLCK      A  L  EM  + + P+  
Sbjct: 166 INGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIV 225

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  +ID + K E   +A +L  ++ ++G+D D+  YTSL+ G  R G   E + L  EM
Sbjct: 226 IYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEM 285

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + + I P+      L+     +G M EA  + N M+ RG
Sbjct: 286 VNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRG 324



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 104/215 (48%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           + G   N +  TT+M      GE  +A+   D +    + +  V +  LI+GLCK G   
Sbjct: 147 KRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSI 206

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +A      M    + PN+ +Y  +ID  CK     +AR+L+ ++    + PD   YT+LI
Sbjct: 207 DAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLI 266

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G+ +   + E   L   M    ++ ++  +  L+    R G + EA+ +F+ M+ RG  
Sbjct: 267 RGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQ 326

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           PD +   +L+  H   GN+ EA +L + +  RG+L
Sbjct: 327 PDIVTFNTLISGHCLHGNVLEARKLFDTVFERGIL 361



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 109/246 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI  ++  +  +I   C + K  +++ + + M + G   + V   TL+  +   G 
Sbjct: 285 MVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 344

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D + +  I   V ++ +LI G CK   + EA+  F  M    +  ++ +Y++
Sbjct: 345 VLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSS 404

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I  A  LF  +      P+   Y  LID + K +     + L   M   G
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG 464

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  L+ G  +   ++EA  L   M  + + PD I   SL     + G + +A 
Sbjct: 465 LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAW 524

Query: 241 ELQNEM 246
           EL   M
Sbjct: 525 ELFKVM 530



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I  D+  Y  +I G C   + +++  L +EM+   +  + V+ ++L+D   K+G  S 
Sbjct: 358 RGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISY 417

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L   + +      V+T+ +LID  CK   +   I+ F  M   GL P V  Y  LI+
Sbjct: 418 AWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILIN 477

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   I  A NL   M  +++ PD+  Y +L DG  K     +A  L   M   G  +
Sbjct: 478 GYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPV 537

Query: 184 DLNAYTSLV 192
           D+  Y  L+
Sbjct: 538 DVATYNVLL 546



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 79/164 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ KN+  D+ LY ++I GLC   +   +  L S +  +G   N +    L+DA+ K  +
Sbjct: 390 MRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQD 449

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + L   M    +  TV+T+ +LI+G CKS  +REA++    M    L P+   Y +
Sbjct: 450 IDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNS 509

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
           L DGLCK   I  A  LF  M       D   Y  L+D + K +
Sbjct: 510 LFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQ 553


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 132/243 (54%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + +II  LC   K  +  LLL EM+E  +  N V  TTL+D+ FKA     AL+L 
Sbjct: 260 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 319

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+   I V +V + VL+DGL K+G +REA   F  + +    PNV  YTAL+DGLCK 
Sbjct: 320 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 379

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  +  +M ++ +IP+   Y+++I+GY+K    +EA++L  +M +  V  +   Y
Sbjct: 380 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 439

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ GL + G  + A  L  EM   G+  +  +  +L+      G + E   L  +M+ 
Sbjct: 440 GTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 499

Query: 249 RGL 251
           +G+
Sbjct: 500 KGV 502



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 126/239 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++  L   + +  +  L S+M   G+  + V+ T LMD  FKAG+  EA      +L
Sbjct: 299 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 358

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      VVT+  L+DGLCK+G +  A     +M +  + PNV  Y+++I+G  KK  +E
Sbjct: 359 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 418

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L  +M  ++++P+   Y  +IDG  K    + A+ L   M  +GV+ +     +LV
Sbjct: 419 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 478

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L R G ++E + L  +M+ +G+  D+I   SL+   ++ G+ + A+    EM  RG+
Sbjct: 479 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 537



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 7/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ + I  D   Y T+I GLC     +++   LSEM + G+  +TV   TL+D + K G 
Sbjct: 154 LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN 213

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L+DE+     E+ ++T  +L+        + EA   +  M   G  P+V  +++
Sbjct: 214 FVRAKALVDEI----SELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSS 266

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LCK   +     L  EM +  + P+   YT L+D   K   ++ AL L ++M   G
Sbjct: 267 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 326

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + +DL  YT L+ GL + G L+EA   F  ++    +P+ +   +L+    + G++  A 
Sbjct: 327 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 386

Query: 241 ELQNEMMGRGLL 252
            +  +M+ + ++
Sbjct: 387 FIITQMLEKSVI 398



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ D+  +  ++     +   E    L  +MK  G+  + + C  ++    + G+
Sbjct: 566 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 625

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +L++M+   I   + T+ + +D   K             +  +G+  +  VY  
Sbjct: 626 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 685

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK    ++A  +  +M  R  IPDT  + +L+ GY      ++AL+  + M E G
Sbjct: 686 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 745

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +++ GLS  G ++E      EM  RG+ PD+    +L+    + GNM  ++
Sbjct: 746 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 805

Query: 241 ELQNEMMGRGLL 252
            +  EM+  GL+
Sbjct: 806 TIYCEMIADGLV 817



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 28/269 (10%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKE--------------------------- 38
           I  D   Y T+I G C    F  +K L+ E+ E                           
Sbjct: 194 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMV 253

Query: 39  -NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
            +G   + V  +++++   K G+  E   LL EM +  +    VT+  L+D L K+ + R
Sbjct: 254 MSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYR 313

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            A+  + +M   G+  ++ VYT L+DGL K   +  A   F  + + + +P+   YTAL+
Sbjct: 314 HALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALV 373

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DG  K      A  +  +M E  V  ++  Y+S++ G  + G L+EA  L  +M  + ++
Sbjct: 374 DGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVV 433

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEM 246
           P+     +++   ++ G  + AIEL  EM
Sbjct: 434 PNGFTYGTVIDGLFKAGKEEMAIELSKEM 462



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 11/247 (4%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +  D  L+ ++I    +     D   L+ S+M   G++ +      L+ ++ K G  S A
Sbjct: 91  VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 150

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +SLL   +   I +  VT+  +I GLC+ GL  EA  +   M   G+ P+   Y  LIDG
Sbjct: 151 ISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG 207

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK     RA+ L DE+ + ++I     +T L+  Y    + +EA      M   G D D
Sbjct: 208 FCKVGNFVRAKALVDEISELNLI----THTILLSSYYNLHAIEEAY---RDMVMSGFDPD 260

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  ++S++  L + G + E  +L  EM    + P+ +   +L+   ++      A+ L +
Sbjct: 261 VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 320

Query: 245 EMMGRGL 251
           +M+ RG+
Sbjct: 321 QMVVRGI 327



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 13/226 (5%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK    +Y T+I  LC     + + +++ +M+  G   +TV   +LM  YF      +AL
Sbjct: 676 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 735

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S    M+++ I   V T+  +I GL  +GL++E   +   M   G+ P+   Y ALI G 
Sbjct: 736 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQ 795

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   ++ +  ++ EM    ++P T+ Y  LI  +       +A  L   M + GV  + 
Sbjct: 796 AKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNT 855

Query: 186 NAYTSLVWGLSR-CGH-----------LQEARVLFHEMI-GRGILP 218
           + Y +++ GL + C H           L EA+ L  EM+  +G +P
Sbjct: 856 STYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 901



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 1/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC       ++ ++++M E  +  N V  +++++ Y K G   EA+SLL +M 
Sbjct: 369 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 428

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +     T+  +IDGL K+G    AI+    M   G+  N  +  AL++ L +   I+
Sbjct: 429 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 488

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + L  +M  + +  D   YT+LID + K    + AL     M E G+  D+ +Y  L+
Sbjct: 489 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 548

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G+ + G +  A   +  M  +GI PD      ++    ++G+ +  ++L ++M   G+
Sbjct: 549 SGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 606



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 4/194 (2%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           F+  + LLS     G+  +  +  TL+    K G   +A  ++ +M         VTF  
Sbjct: 665 FKTHETLLSY----GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNS 720

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+ G      VR+A+  +  M + G+ PNVA Y  +I GL     I+       EM  R 
Sbjct: 721 LMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 780

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           M PD   Y ALI G  K  + K ++ +   M   G+    + Y  L+   +  G + +AR
Sbjct: 781 MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 840

Query: 206 VLFHEMIGRGILPD 219
            L  EM  RG+ P+
Sbjct: 841 ELLKEMGKRGVSPN 854



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 108/251 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   IK  L     ++  LC   K E++  +L++M    +  N       +D   K   
Sbjct: 601 MKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR 660

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                   + +L   I+++   +  LI  LCK G+ ++A    G M   G  P+   + +
Sbjct: 661 ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNS 720

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G    + + +A + +  M +  + P+   Y  +I G       KE     + M   G
Sbjct: 721 LMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 780

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +L+ G ++ G+++ +  ++ EMI  G++P       L+ +    G M +A 
Sbjct: 781 MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 840

Query: 241 ELQNEMMGRGL 251
           EL  EM  RG+
Sbjct: 841 ELLKEMGKRGV 851



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 1/244 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K++  ++  Y ++I G   +   E++  LL +M++  +  N     T++D  FKAG+   
Sbjct: 395 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 454

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ L  EM    +E        L++ L + G ++E       M   G+  +   YT+LID
Sbjct: 455 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 514

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
              K    E A    +EM +R M  D  +Y  LI G LK          K  M E G++ 
Sbjct: 515 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKG-MREKGIEP 573

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  +  ++    + G  +    L+ +M   GI P  + C  ++    E G M+EAI + 
Sbjct: 574 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 633

Query: 244 NEMM 247
           N+MM
Sbjct: 634 NQMM 637



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 6/143 (4%)

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCI-ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
           M  FG+ P+  ++ +LI        + ++   ++ +M    + PD  A   LI  + K  
Sbjct: 86  MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 145

Query: 165 SFKEALNL-KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               A++L +NR+    + +D   Y +++ GL   G   EA     EM+  GILPD +  
Sbjct: 146 RLSFAISLLRNRV----ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY 201

Query: 224 ISLLKKHYERGNMDEAIELQNEM 246
            +L+    + GN   A  L +E+
Sbjct: 202 NTLIDGFCKVGNFVRAKALVDEI 224


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 33/275 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GL    + + +  L  EM  +G +   V  T +++A FKA  P +A++  
Sbjct: 72  DVVSYTTLIMGLADSGRIDVACELFEEMSSSG-SQCVVAYTAIINALFKAHRPDQAIACF 130

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M+  + +  + TF V+I GLCK+G +  A + F  M   G  P++ VYT+L+DGL K 
Sbjct: 131 ERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKA 190

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID------------------------------ 158
           + ++ AR L  E+  R M P    YT+ I                               
Sbjct: 191 SMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCI 250

Query: 159 --GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
             GY+     +EAL LK+ M + GV LD+  YT+L+ GL       EA+ +F  M+ +G 
Sbjct: 251 FGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGC 310

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +PD      ++    ++G M  A ++   M   GL
Sbjct: 311 VPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGL 345



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 117/238 (49%), Gaps = 2/238 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I GLC+  +F  +  LL EM+  G+  + V    ++ A  +  E  +ALS  
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
              +  R ++ VV++  LI GL  SG +  A + F  M   G    VA YTA+I+ L K 
Sbjct: 63  HS-VSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCVVA-YTAIINALFKA 120

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           +  ++A   F+ M  R   PD   +T +I G  K      A  +   M   G   D+  Y
Sbjct: 121 HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVY 180

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           TSLV GLS+   + EAR L  E++ RG+ P E+   S +    + G ++EA +L  EM
Sbjct: 181 TSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM 238



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 131/320 (40%), Gaps = 68/320 (21%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    DL  +  +I GLC   K   +  +  EM   G   + ++ T+L+D   KA  
Sbjct: 133 MVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASM 192

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA---IDYFGR------------ 105
             EA  LL E++   ++ T VT+   I GLCK+G V EA   +   G+            
Sbjct: 193 MDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFG 252

Query: 106 -----------------MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                            M   G+  +V  YT LI GL      + A+ +F+ M ++  +P
Sbjct: 253 GYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVP 312

Query: 149 DTT-----------------------------------AYTALIDGYLKHESFKEALNLK 173
           DT                                     Y +L+DG+L     +EA+N+ 
Sbjct: 313 DTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVY 372

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLLKKHYE 232
           + M    V   +  Y  L+ GL + G   +AR++  EM  R GI+P  +   +L+    +
Sbjct: 373 STMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGK 432

Query: 233 RGNMDEAIELQNEMMGRGLL 252
            G  DEAI++  EM+  G++
Sbjct: 433 AGRADEAIDVFTEMVDNGVV 452



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 107/237 (45%), Gaps = 1/237 (0%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I  G  +E K E++  L  EM + G+T +    T L+   F      EA  + + M+   
Sbjct: 250 IFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQG 309

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
                 T+ +++   CK G ++ A      M   GL  N  VY +L+DG    N    A 
Sbjct: 310 CVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAI 369

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA-LNLKNRMTEVGVDLDLNAYTSLVWG 194
           N++  M ++ + P    Y  L+ G  K     +A L L+      G+   + +Y +L+ G
Sbjct: 370 NVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHG 429

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L + G   EA  +F EM+  G++PD   C SL++       MDEA +L  +M   G+
Sbjct: 430 LGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGI 486



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 1/212 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   YG I+   C + K + +  ++  M   GL AN  +  +LMD +       EA+++ 
Sbjct: 313 DTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVY 372

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF-GLHPNVAVYTALIDGLCK 127
             ML   ++ ++VT+ +L+ GLCK G   +A      M +  G+ P +  Y  LI GL K
Sbjct: 373 STMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGK 432

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
               + A ++F EM    ++PD  + T+LI      +   EA  L   M  +G+  D  A
Sbjct: 433 AGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALA 492

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           Y +LV  L     +  A  +  EM+    +PD
Sbjct: 493 YNALVKVLCGGAKVGPAWDVLVEMMDNSCVPD 524



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 1/248 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D+  Y  +I GL    + ++++ +   M   G   +T     ++  + K G+
Sbjct: 270 MVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGK 329

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +++ M  + +E     +  L+DG       REAI+ +  M    + P++  Y  
Sbjct: 330 MQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNI 389

Query: 121 LIDGLCKKNCIERARNLFDEMPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L+ GLCK      AR +  EM +RD ++P   +Y  LI G  K     EA+++   M + 
Sbjct: 390 LMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDN 449

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV  D  + TSL+  L+    + EA  L  +M   GI PD +   +L+K       +  A
Sbjct: 450 GVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPA 509

Query: 240 IELQNEMM 247
            ++  EMM
Sbjct: 510 WDVLVEMM 517



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 1/158 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGEPS 62
           K +K  +  Y  ++ GLC   +  D++L+L EM+E +G+    V   TL+    KAG   
Sbjct: 378 KMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRAD 437

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA+ +  EM+D+ +     +   LI  L  +  + EA      MP  G+ P+   Y AL+
Sbjct: 438 EAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALV 497

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
             LC    +  A ++  EM     +PD + + A+  G+
Sbjct: 498 KVLCGGAKVGPAWDVLVEMMDNSCVPDGSTFRAMKLGF 535


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 127/255 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I   +  Y  +I GL      E +++  +EM+  GL  + +   +L++ Y KAG 
Sbjct: 301 MENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGN 360

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L  ++  + +  TV+T+ + IDG C+ G + EA      M + G  PNV  YT 
Sbjct: 361 LKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTI 420

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G      +  AR  FDEM  + + PD  AY   I   L       AL L+  +   G
Sbjct: 421 LMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEG 480

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  L+ GL + G+L++A+ L  +M+  G+ PD I    L+  H ERG + EA 
Sbjct: 481 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREAR 540

Query: 241 ELQNEMMGRGLLSGS 255
           ++ N M+  GLL  +
Sbjct: 541 KIFNNMISDGLLPSA 555



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 6/235 (2%)

Query: 17  IWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           +  L +  +F D ++L   ++ +    NT IC  L+      G+ + AL L + ++   I
Sbjct: 428 VCSLAMAREFFD-EMLSKGLQPDCFAYNTRICAELI-----LGDIARALELREVLMLEGI 481

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
               VT+ +LI GLCK+G +++A +   +M   GL P+   YT LI   C++  +  AR 
Sbjct: 482 SSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARK 541

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           +F+ M    ++P    +T +I  Y +  +   A     +M E GV+ +   Y  L+  L 
Sbjct: 542 IFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 601

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           R G  Q A   FHEM+ RG++ ++     L+  + + GN ++A+    EM   G+
Sbjct: 602 RMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGI 656



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 2/200 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I +D   Y  +I GLC     +D+K L  +M  NGL  + +  T L+ A+ + G   E
Sbjct: 479 EGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLRE 538

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  + + M+   +  + VTF V+I   C+ G +  A  +F +M + G+ PN   Y  LI 
Sbjct: 539 ARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 598

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LC+    + A + F EM +R ++ +   YT LIDG  K  ++++A+     M + G+  
Sbjct: 599 ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHP 658

Query: 184 DLNAYTSLVWGLSRCGHLQE 203
           D   + +LV G    GH+  
Sbjct: 659 DYLTHKALVKGFD--GHVHH 676



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 117/288 (40%), Gaps = 35/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D+  Y +++ G C     +++ LL  +++  GL    +     +D Y + G+
Sbjct: 336 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGD 395

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDG---LCKSGLVREAIDYF---GRMPDF----- 109
             EA  L +EM +      V T+ +L+ G   +C   + RE  D     G  PD      
Sbjct: 396 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNT 455

Query: 110 ------------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                   G+  +   Y  LI GLCK   ++ A+ L  +M    
Sbjct: 456 RICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNG 515

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   YT LI  + +    +EA  + N M   G+      +T ++    R G+L  A 
Sbjct: 516 LQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAY 575

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
             F +M+  G+ P+EI    L+      G    A    +EM+ RGL++
Sbjct: 576 GWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVA 623



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 3/219 (1%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           EM  +G+  +   C  ++ A   A    +  ++ +EML   IE ++VT+  L+D   K G
Sbjct: 159 EMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEG 218

Query: 95  LVREAIDYFGRMPD--FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
              +       M     G  PN   Y  +I GL +K  +E A  L + M +      +  
Sbjct: 219 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASSFT 277

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y  LI G L     K+  +L+  M   G+   +  Y +++ GL + G ++ A+V F EM 
Sbjct: 278 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR 337

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             G+LPD I   SLL  + + GN+ EA+ L  ++   GL
Sbjct: 338 AMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGL 376



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 9/257 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+     ++  L   ++++D   +  EM + G+  + V   TL+D++ K G 
Sbjct: 160 MASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGR 219

Query: 61  PSEALSLLDEMLDSRIEVTV---VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
             +   LL EM ++R    +   VT+ V+I GL + G + EA +    M       +   
Sbjct: 220 KDKVAMLLKEM-ETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKASSFT 277

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK-NRM 176
           Y  LI GL  + C+++  +L  EM    ++P    Y A+I G L+     EA  +K   M
Sbjct: 278 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQ-SGLVEAAQVKFAEM 336

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER-GN 235
             +G+  D+  Y SL+ G  + G+L+EA +LF ++   G+ P  +L  ++    Y R G+
Sbjct: 337 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPT-VLTYNIRIDGYCRLGD 395

Query: 236 MDEAIELQNEMMGRGLL 252
           ++EA  L+ EM  +G L
Sbjct: 396 LEEARILKEEMGEQGCL 412



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 103/228 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y T I    I      +  L   +   G++++TV    L+    K G 
Sbjct: 441 MLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGN 500

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  +M+ + ++   +T+  LI   C+ GL+REA   F  M   GL P+   +T 
Sbjct: 501 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTV 560

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   C++  +  A   F +M +  + P+   Y  LI    +    + A +  + M E G
Sbjct: 561 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 620

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           +  +   YT L+ G  + G+ ++A   + EM   GI PD +   +L+K
Sbjct: 621 LVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVK 668



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 76/163 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D   Y  +I   C      +++ + + M  +GL  + V  T ++ AY + G 
Sbjct: 511 MVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGN 570

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     +ML+  +E   +T+ VLI  LC+ G  + A  +F  M + GL  N   YT 
Sbjct: 571 LYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTL 630

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
           LIDG CK    E A   + EM +  + PD   + AL+ G+  H
Sbjct: 631 LIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGFDGH 673


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 119/242 (49%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y T+I G C   + E +     +MK   +  + +    L++   KA   + A  LL EM
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 251

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            D+ +  TV TF  LID   ++G + +       M + GL PNV  Y ++++  CK   I
Sbjct: 252 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 311

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  + D+M  +D++P+   Y A+ID Y++H    +A  L  +M   G+   +  Y  L
Sbjct: 312 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 371

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL     + EA  + + +    ++PD +   +L+     RGN+D+A++LQ  M   G+
Sbjct: 372 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431

Query: 252 LS 253
            S
Sbjct: 432 KS 433



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 35/284 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK ++IK D   Y  +I GLC   +  +++ LL EM++NG+        TL+DAY + G+
Sbjct: 216 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 275

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +L EM ++ ++  VV++  +++  CK+G + EA+     M    + PN  VY A
Sbjct: 276 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 335

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           +ID                                   GLC ++ I  A  + + +    
Sbjct: 336 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 395

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +IPD  +Y  LI       +  +AL+L+ RM + G+   +  Y  L+ GL   G L E  
Sbjct: 396 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 455

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+ +M+   ++P   +   +++ + + GN  +A +L+ EM+ +
Sbjct: 456 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 499



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 122/251 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +   Y  ++ GLC   +  ++  LL EM    +  +    + L D   + G+    L
Sbjct: 81  LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 140

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  + L + + +   T  +L++GLCK G V  A +    + + GL P   +Y  LI+G 
Sbjct: 141 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 200

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   +E A + F +M  R + PD   Y ALI+G  K E    A +L   M + GV+  +
Sbjct: 201 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 260

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             + +L+    R G L++  ++  EM   G+ P+ +   S++    + G + EA+ + ++
Sbjct: 261 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 320

Query: 246 MMGRGLLSGSK 256
           M  + +L  ++
Sbjct: 321 MFHKDVLPNAQ 331



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 6/254 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLS---EMKENGLTANTVICTTLMDAYFK 57
           M  + +  D   Y  +  GL   S+  DSK +LS   +  +NG+T     C+ L++   K
Sbjct: 111 MASQKMVPDGFTYSILFDGL---SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 167

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            G+ S A  +L  ++++ +  T V +  LI+G C++G +  A   FG+M    + P+   
Sbjct: 168 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 227

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y ALI+GLCK   I  A++L  EM    + P    +  LID Y +    ++   + + M 
Sbjct: 228 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 287

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E G+  ++ +Y S+V    + G + EA  +  +M  + +LP+  +  +++  + E G  D
Sbjct: 288 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 347

Query: 238 EAIELQNEMMGRGL 251
           +A  L  +M   G+
Sbjct: 348 QAFILVEKMKSNGI 361



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 5/211 (2%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           N  + N VI        ++AG   +A+ + DEM +  +    +T+  +IDG  K G +  
Sbjct: 14  NAFSYNVVIA-----GMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEA 68

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
                 +M   GL PN   Y  L+ GLC+   +     L DEM  + M+PD   Y+ L D
Sbjct: 69  GFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFD 128

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           G  ++   K  L+L  +  + GV +     + L+ GL + G +  A  +   ++  G++P
Sbjct: 129 GLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 188

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGR 249
             ++  +L+  + + G ++ A     +M  R
Sbjct: 189 TRVIYNTLINGYCQTGELEGAFSTFGQMKSR 219



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 107/274 (39%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G+    +  D+  +  EM E  +  N +   T++D + K G+      L D+M+
Sbjct: 18  YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 77

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID--------- 123
              ++   +T+ VL+ GLC++G + E       M    + P+   Y+ L D         
Sbjct: 78  CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 137

Query: 124 --------------------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                     GLCK   +  A  +   +    ++P    Y  LI
Sbjct: 138 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 197

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +GY +    + A +   +M    +  D   Y +L+ GL +   +  A+ L  EM   G+ 
Sbjct: 198 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 257

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P      +L+  +   G +++   + +EM   GL
Sbjct: 258 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 291



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 54/107 (50%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           PN   Y  +I G+ +      A  +FDEM +R ++P+   Y  +IDG++K    +    L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +++M   G+  +   Y  L+ GL R G + E   L  EM  + ++PD
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPD 119


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 16/263 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y  +I  LC   K E S LL  EMK  G+  +    T L+D++ KAG 
Sbjct: 443 MMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGL 502

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A S  DEM        VVT+  L+    KS  + +A D F RM D   +PN   Y+A
Sbjct: 503 IEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSA 562

Query: 121 LIDGLCKKNCIERARNLFDEMPKRD----------------MIPDTTAYTALIDGYLKHE 164
           LIDGLCK   I++A  +++++                    + P+   Y ALIDG  K +
Sbjct: 563 LIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQ 622

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
              +A  L + M   G + +   Y +L+ G  + G +  A+ +F  M   G LP      
Sbjct: 623 KVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYT 682

Query: 225 SLLKKHYERGNMDEAIELQNEMM 247
           SL+ + ++ G +D A+++ +EM+
Sbjct: 683 SLIDRMFKDGRLDLAMKVLSEML 705



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 117/262 (44%), Gaps = 41/262 (15%)

Query: 22  IESKFEDSKL-----LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           I+  F+D +L     +LSEM  +    N V  T ++D   K GE  +AL+LL  M +   
Sbjct: 685 IDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGC 744

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
              VVT+  LIDGL K+G    ++  F +M   G  PN   Y  LI+  C    ++ A  
Sbjct: 745 SPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHL 804

Query: 137 LFDEM-----PKR----------------------------DMIPDTTAYTALIDGYLKH 163
           L DEM     PK                             + +P    Y  LID + K 
Sbjct: 805 LLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKA 864

Query: 164 ESFKEALNLKNRMTEVGVDLDLNA---YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
              + AL L   + EV   L++ +   Y SL+  L     ++EA  L+ EM  +GI+PD 
Sbjct: 865 GRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDL 924

Query: 221 ILCISLLKKHYERGNMDEAIEL 242
           I+ +SL+K   E    DEA++L
Sbjct: 925 IVFVSLVKGLIEVNKWDEALQL 946



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 104/206 (50%)

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           +  N V    L+D   KA + S+A  LLD ML +  E   + +  LIDG CK G +  A 
Sbjct: 604 IAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQ 663

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           + F RM   G  P+V  YT+LID + K   ++ A  +  EM      P+   YTA+IDG 
Sbjct: 664 EVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGL 723

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K    ++ALNL + M E G   ++  YT+L+ GL + G    +  LF +M  +G  P+ 
Sbjct: 724 SKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNY 783

Query: 221 ILCISLLKKHYERGNMDEAIELQNEM 246
           +    L+      G +DEA  L +EM
Sbjct: 784 VTYRVLINHCCAAGLLDEAHLLLDEM 809



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 128/301 (42%), Gaps = 51/301 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D+  Y  +I   C     E ++    EM+  G + N V  T L+ AY K+ +
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--------PDF--- 109
             +A  +   M+D+      VT+  LIDGLCK+G +++A + + ++         DF   
Sbjct: 538 LIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFE 597

Query: 110 ----------------------------------------GLHPNVAVYTALIDGLCKKN 129
                                                   G  PN  VY ALIDG CK  
Sbjct: 598 GNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIG 657

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I+ A+ +F  M K   +P    YT+LID   K      A+ + + M     + ++  YT
Sbjct: 658 KIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYT 717

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +++ GLS+ G +++A  L   M  +G  P+ +   +L+    + G  D +++L  +M  +
Sbjct: 718 AMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSK 777

Query: 250 G 250
           G
Sbjct: 778 G 778



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 95/207 (45%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
            I  ++  YG +I GLC   K  D+  LL  M   G   N ++   L+D + K G+   A
Sbjct: 603 TIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNA 662

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             +   M       +V T+  LID + K G +  A+     M +   +PNV  YTA+IDG
Sbjct: 663 QEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDG 722

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L K   IE+A NL   M ++   P+   YTALIDG  K      +L L  +M   G   +
Sbjct: 723 LSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPN 782

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEM 211
              Y  L+      G L EA +L  EM
Sbjct: 783 YVTYRVLINHCCAAGLLDEAHLLLDEM 809



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 6/207 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLL-LSEMKENGLTANTVICTTLMDAYFK-----AGEPSEALS 66
           Y   I  +C + +  +++LL L E     + A + +   +  A F       G+  +A  
Sbjct: 379 YNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQ 438

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L EM+         T+  +I  LC++  V ++   F  M   G++P+V  YT LID  C
Sbjct: 439 ILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFC 498

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   IE+AR+ FDEM      P+   YTAL+  YLK +   +A ++ +RM +     +  
Sbjct: 499 KAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAV 558

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIG 213
            Y++L+ GL + G +Q+A  ++ ++IG
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYEKLIG 585



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 2/236 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K ++++ +   M + G   +    T+L+D  FK G    A+ +L EM
Sbjct: 645 VYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM 704

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L+      VVT+  +IDGL K G + +A++    M + G  PNV  YTALIDGL K    
Sbjct: 705 LNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKA 764

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + +  LF +M  +   P+   Y  LI+         EA  L + M        L  Y   
Sbjct: 765 DASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCA 824

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           V G S+      +  L  EM     +P   +   L+    + G ++ A+EL  E++
Sbjct: 825 VQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELV 878



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/289 (21%), Positives = 117/289 (40%), Gaps = 41/289 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +   ++  Y T++ G   + +F   K +++ M   G   N  +  +L+  Y  AG+
Sbjct: 297 MRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGD 356

Query: 61  PSEALSLLDEM---------------------------------LDSRIEVTVVTFCVL- 86
            + A  L + M                                 ++   E  +   CVL 
Sbjct: 357 YAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLN 416

Query: 87  -------IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
                     LC  G   +A      M   G  P+ + YT +I  LC+   +E++  LF 
Sbjct: 417 KVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQ 476

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM +  + PD   YT LID + K    ++A +  + M  VG   ++  YT+L+    +  
Sbjct: 477 EMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSK 536

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            L +A  +FH M+     P+ +   +L+    + G + +A E+  +++G
Sbjct: 537 QLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIG 585



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 112/288 (38%), Gaps = 41/288 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ ++   D  L   +I GL   S F ++   L  M+ N    N V   TL+  + K  +
Sbjct: 262 LEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQ 321

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 +++ M+          F  L+ G C +G    A   F RM   G  P    Y  
Sbjct: 322 FGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNI 381

Query: 121 LIDGLCKK----------------------NCI-------------------ERARNLFD 139
            I  +C +                      +C+                   E+A  +  
Sbjct: 382 FIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILK 441

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM ++  +PDT+ YT +I    + +  +++  L   M   GV+ D+  YT L+    + G
Sbjct: 442 EMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAG 501

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            +++AR  F EM   G  P+ +   +LL  + +   + +A ++ + M+
Sbjct: 502 LIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMV 549



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 9/246 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  L    + E    +  EM  +G   +         A  K G  ++AL++L E  
Sbjct: 207 YNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNML-EKE 265

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  ++  + T   +I GL ++ L  EA+ +  RM      PNV  Y  L+ G  KK    
Sbjct: 266 DFNLDTVLCT--QMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFG 323

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + + + M      P+ + + +L+ GY     +  A  L NRMT  G      AY   +
Sbjct: 324 WCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFI 383

Query: 193 WGLSRCGHLQEARVL------FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             +     L  A +L      + EM+    + +++   +  +     G  ++A ++  EM
Sbjct: 384 GSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEM 443

Query: 247 MGRGLL 252
           M +G +
Sbjct: 444 MRKGFV 449



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 3/187 (1%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL E+ +   EV      VL+   C+ GL  EA++  GR+ DFG  P+   Y AL+ 
Sbjct: 153 AERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQ 212

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            L     +E    +  EM       D +          K   + +ALN+   + +   +L
Sbjct: 213 VLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNM---LEKEDFNL 269

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D    T ++ GL       EA    H M     +P+ +   +LL    ++        + 
Sbjct: 270 DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRII 329

Query: 244 NEMMGRG 250
           N MM  G
Sbjct: 330 NMMMTEG 336



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 5/189 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +   Y  +I   C     +++ LLL EMK      +       +  + K   
Sbjct: 774 MNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFI 833

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV---AV 117
            S  L LL+EM           + +LID   K+G +  A++    + +     N+    +
Sbjct: 834 AS--LGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGM 891

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y +LI  LC  + +E A  L+ EM ++ ++PD   + +L+ G ++   + EAL L     
Sbjct: 892 YASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRC 951

Query: 178 EVGVDLDLN 186
             GV+   N
Sbjct: 952 HEGVNWQDN 960



 Score = 57.4 bits (137), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 3/186 (1%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           L  +K+ G   + V    L+     AG+      +  EM  S   +   T       LCK
Sbjct: 192 LGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCK 251

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
            G   +A++   +  DF L  +  + T +I GL + +    A +    M     IP+   
Sbjct: 252 VGRWADALNMLEK-EDFNL--DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVT 308

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y  L+ G+LK + F     + N M   G + + + + SLV G    G    A  LF+ M 
Sbjct: 309 YRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMT 368

Query: 213 GRGILP 218
             G  P
Sbjct: 369 TCGSPP 374


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 113/221 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N+V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK+G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVV 417



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 122/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P++ ++T LIDG+ K      A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L +EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 284 YGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMI 338



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 122/244 (50%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A L  +  ++   C E +   ++ +   + + GL  + V   TLM+ Y K G+ +E   L
Sbjct: 134 ASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            + M  S ++  V T+ VLI+GLCK   + +A + F  M D GL PN   +T LIDG CK
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCK 253

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              ++ A  ++ +M  + + PD   Y  LI G  K+   K+A +L N M+  G+  D   
Sbjct: 254 DGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKIT 313

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+L+ G  + G L+ A      MI   I  D++   +L+    + G   +A ++  EM+
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 248 GRGL 251
             GL
Sbjct: 374 SVGL 377



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 116/221 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD+ +    V+F  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G V  A++ + +M    L P++  Y  LI GLCK   +++A++L +EM  + + PD  
Sbjct: 253 KDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYV 413



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 103/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+   CK+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   L +A  LF EM+  G++P+ + 
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVS 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKDGRVDLAMEIYKQMLSQSL 272



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 91/183 (49%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +E L+     ++  F +L+   CK G +R A   F  +  +GL P+V  +  L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +     L + M    + PD   Y+ LI+G  K     +A  L + M + G+  +  ++
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSF 244

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    + G++ +A +L NEM  
Sbjct: 245 TTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSM 304

Query: 249 RGL 251
           +GL
Sbjct: 305 KGL 307


>gi|224576659|gb|ACN57003.1| At1g03560-like protein [Capsella grandiflora]
 gi|224576663|gb|ACN57005.1| At1g03560-like protein [Capsella grandiflora]
          Length = 207

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      G   N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F          ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDH--- 177

Query: 234 GNMDEAIELQNEMMGRGL 251
              +EA++L + M+ +G+
Sbjct: 178 -RNEEALKLWDMMIDKGI 194



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 1/192 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        +   +    +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCRFNGXAINSXFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            L K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + G+ 
Sbjct: 136 ALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGIT 195

Query: 183 LDLNAYTSLVWG 194
                + +L  G
Sbjct: 196 PTAACFRALSTG 207



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 1/160 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NG   N+   ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSXFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
            LI G+ K +  E A  L+D M  + + P    + AL  G
Sbjct: 168 ILISGMFKDHRNEEALKLWDMMIDKGITPTAACFRALSTG 207


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ ++  Y +++ GLC   ++ D+  LL +M + G+  N +  T L+DA+ K G+
Sbjct: 213 MGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGK 272

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L   M+   +   V T+  LI+GLC  G + EA   F  M   G +PN   YT 
Sbjct: 273 IMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTT 332

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY-------LKHESFKE----- 168
           LI G CK   +E    +F EM ++ ++ +T  YT LI GY       +  E F +     
Sbjct: 333 LIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRR 392

Query: 169 -----------------------ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                                  AL +   M +  +D+++  YT ++ G+ + G +++A 
Sbjct: 393 APPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAF 452

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            LF  +  +G+ P+ I   +++     RG + EA  L  +M   G L
Sbjct: 453 DLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFL 499



 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 122/236 (51%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           +C  S+   +   L +M + G   + V  T+L+  +       +AL+L D+++       
Sbjct: 127 VCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPN 186

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           VVT+  LI  LCK+  +  A++ F +M D G+ PNV  Y +L+ GLC+      A  L  
Sbjct: 187 VVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLR 246

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           +M KR + P+   +TALID ++K     EA  L   M ++ V  D+  YT+L+ GL   G
Sbjct: 247 DMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYG 306

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            L EAR +F+ M   G  P+E+   +L+    +   +++  ++  EM  +GL++ +
Sbjct: 307 RLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANT 362



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 119/244 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + DL  + +++ G C  ++ ED+  L  ++   G   N V  TTL+    K    + A+
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAV 207

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + ++M D+ I   VVT+  L+ GLC+ G   +A      M   G+ PNV  +TALID  
Sbjct: 208 EIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAF 267

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   I  A+ L+  M +  + PD   YTALI+G   +    EA  +   M   G   + 
Sbjct: 268 VKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNE 327

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+ G  +   +++   +F+EM  +G++ + I    L++ +   G  D A E+ N+
Sbjct: 328 VTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQ 387

Query: 246 MMGR 249
           M  R
Sbjct: 388 MGSR 391



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 107/217 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G   + ++  Y T+I  LC       +  + ++M +NG+  N V   +L+    + G  S
Sbjct: 180 GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWS 239

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  LL +M+   I+  V+TF  LID   K G + EA + +  M    ++P+V  YTALI
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALI 299

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +GLC    ++ AR +F  M      P+   YT LI G+ K +  ++   +   M++ G+ 
Sbjct: 300 NGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV 359

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            +   YT L+ G    G    A+ +F++M  R   PD
Sbjct: 360 ANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPD 396



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 106/216 (49%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  Y  +I GLC   + ++++ +   M+ NG   N V  TTL+  + K+    + 
Sbjct: 287 SVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDG 346

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             +  EM    +    +T+ VLI G C  G    A + F +M      P++  Y  L+DG
Sbjct: 347 TKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDG 406

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC    +E+A  +F  M KR+M  +   YT +I G  K    ++A +L   +   G+  +
Sbjct: 407 LCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPN 466

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  YT+++ G  R G + EA  LF +M   G LP+E
Sbjct: 467 VITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNE 502



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 106/223 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           +F ++  L + M  +    + V  T L+    K       +SL ++M    I   + T  
Sbjct: 62  QFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCN 121

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           ++++ +C+S     A  + G+M   G  P++  +T+L+ G C  N IE A  LFD++   
Sbjct: 122 IVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGM 181

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              P+   YT LI    K+     A+ + N+M + G+  ++  Y SLV GL   G   +A
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L  +M+ RGI P+ I   +L+    + G + EA EL   M+
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMI 284



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 35/175 (20%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + ED   +  EM + GL ANT+  T L+  Y   G P  A  + ++M 
Sbjct: 330 YTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMG 389

Query: 73  DSR-----------------------------------IEVTVVTFCVLIDGLCKSGLVR 97
             R                                   +++ +VT+ ++I G+CK G V 
Sbjct: 390 SRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVE 449

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           +A D F  +   G+ PNV  YT +I G C++  I  A  LF +M +   +P+ + 
Sbjct: 450 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 92/190 (48%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +EAL L   M+ SR   ++V F  L+  + K       I  F +M   G+ P +     +
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++ +C+ +   RA     +M K    PD   +T+L+ G+      ++AL L +++  +G 
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++  YT+L+  L +  HL  A  +F++M   GI P+ +   SL+    E G   +A  
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 242 LQNEMMGRGL 251
           L  +MM RG+
Sbjct: 244 LLRDMMKRGI 253



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 54/117 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y  ++ GLC     E + ++   M++  +  N V  T ++    K G+
Sbjct: 388 MGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGK 447

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
             +A  L   +    ++  V+T+  +I G C+ G + EA   F +M + G  PN +V
Sbjct: 448 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 127/248 (51%), Gaps = 5/248 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           ++  AD  + G ++ GLC   K ++++ +LS++       NTV+  TL++ Y  +G   E
Sbjct: 299 RDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEE 354

Query: 64  ALSLL-DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           A  LL   M+ +  E    TF ++IDGLCK G +  A+++   M   G  PNV  YT LI
Sbjct: 355 AKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILI 414

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG CK+   E A  + + M  + +  +T  Y  LI    K    ++AL +   M+  G  
Sbjct: 415 DGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCK 474

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  + SL++GL +   ++EA  L+ +M+  G++ + +   +L+        + +A +L
Sbjct: 475 PDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKL 534

Query: 243 QNEMMGRG 250
             EM  RG
Sbjct: 535 VGEMRFRG 542



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 117/246 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + D   +  +I GLC +     +   L EM + G   N +  T L+D + K G   EA 
Sbjct: 368 FEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEAS 427

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +++ M    + +  V +  LI  LCK G +++A+  +G M   G  P++  + +LI GL
Sbjct: 428 KVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGL 487

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK + +E A  L+ +M    +I +T  Y  LI  +L+ E  ++A  L   M   G  LD 
Sbjct: 488 CKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDN 547

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+  L + G  ++   L  +M G  I P    C  L+      G +++A++   +
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRD 607

Query: 246 MMGRGL 251
           M+ RGL
Sbjct: 608 MIQRGL 613



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 110/238 (46%), Gaps = 1/238 (0%)

Query: 12  LYGTIIWGLCIESKFEDSK-LLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           LY T+I G  +  +FE++K LL   M   G   +      ++D   K G    AL  LDE
Sbjct: 338 LYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDE 397

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M+    E  V+T+ +LIDG CK G   EA      M   GL  N   Y  LI  LCK   
Sbjct: 398 MVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGK 457

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           I+ A  ++ EM  +   PD   + +LI G  K++  +EAL L   M   GV  +   Y +
Sbjct: 458 IQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNT 517

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           L+    R   +Q+A  L  EM  RG   D I    L+K   + G  ++ + L  +M G
Sbjct: 518 LIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 122/250 (48%), Gaps = 5/250 (2%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  +  +I GLC   +  ++  L   M     TA+ +I   LM    + G+  EA +
Sbjct: 267 EPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA 326

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY-FGRMPDFGLHPNVAVYTALIDGL 125
           +L ++ +       V +  LI+G   SG   EA D  +  M   G  P+   +  +IDGL
Sbjct: 327 MLSKIPNP----NTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGL 382

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CKK  +  A    DEM K+   P+   YT LIDG+ K   F+EA  + N M+  G+ L+ 
Sbjct: 383 CKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNT 442

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+  L + G +Q+A  ++ EM  +G  PD     SL+    +   M+EA+ L  +
Sbjct: 443 VGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRD 502

Query: 246 MMGRGLLSGS 255
           M+  G+++ +
Sbjct: 503 MLLEGVIANT 512



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 5/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I   +  +G ++   C+ ++ + +  LL +M ++G   N++I   L+ A  +   
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA+ LL+EM     E  V TF  +I GLCK+G + EA     RM       +  +   
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN-LKNRMTEV 179
           L+ GLC+   ++ AR +  ++P     P+T  Y  LI+GY+    F+EA + L   M   
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G + D   +  ++ GL + G+L  A     EM+ +G  P+ I    L+    ++G+ +EA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426

Query: 240 IELQNEMMGRGL 251
            ++ N M  +GL
Sbjct: 427 SKVVNSMSAKGL 438



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 1/238 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  + ++I+GLC   K E++  L  +M   G+ ANTV   TL+ A+ +   
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EM      +  +T+  LI  LCK+G   + +    +M    + P++     
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  C+   +  A     +M +R + PD   Y +LI+G  K   F+EALNL N +   G
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKG 647

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
           +  D   Y +L+      G   +A  L  + +  G +P+EI   S+L  ++ + N D 
Sbjct: 648 IHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEI-TWSILINYFVKNNSDS 704



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 115/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + ++  Y  +I G C +  FE++  +++ M   GL+ NTV    L+ A  K G+
Sbjct: 398 MVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGK 457

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL +  EM     +  + TF  LI GLCK+  + EA+  +  M   G+  N   Y  
Sbjct: 458 IQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNT 517

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI    +   I++A  L  EM  R    D   Y  LI    K  + ++ L L  +M    
Sbjct: 518 LIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEE 577

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +N+   L+    R G + +A     +MI RG+ PD +   SL+    + G   EA+
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637

Query: 241 ELQNEMMGRGL 251
            L N +  +G+
Sbjct: 638 NLFNGLQAKGI 648



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 1/209 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR-IEVTVVTFCVLIDGL 90
           LL +MK+ G      +   +M  Y KAG P +A  LL +M      E T  ++ V+++ L
Sbjct: 116 LLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEIL 175

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
                 + A + F  M   G+ P V  +  ++   C  N ++ A +L  +M K   +P++
Sbjct: 176 VAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNS 235

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LI    ++    EA+ L   M  +G + D+  +  ++ GL + G + EA  L   
Sbjct: 236 IIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDR 295

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEA 239
           M+ R    D ++   L+      G +DEA
Sbjct: 296 MLLRDFTADALIQGYLMHGLCRMGKVDEA 324



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 81/172 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    D   Y  +I  LC     E    L+ +M    +  +   C  L++++ + G+
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++AL  L +M+   +   +VT+  LI+GLCK G  +EA++ F  +   G+HP+   Y  
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNT 657

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           LI   C +     A  L  +      IP+   ++ LI+ ++K+ S  E   +
Sbjct: 658 LISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSEQFTI 709



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 4/182 (2%)

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P  A ++  +ML   I  TV TF V++   C    V  A      M   G  PN  +Y  
Sbjct: 181 PKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQM 240

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  L + N +  A  L +EM      PD   +  +I G  K     EA  L +RM    
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D      L+ GL R G + EAR +  ++      P+ +L  +L+  +   G  +EA 
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAK 356

Query: 241 EL 242
           +L
Sbjct: 357 DL 358


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 125/236 (52%), Gaps = 2/236 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC +   + +  LL  M+  G+ A+ V   TL+     A E  +A+ L+ EM 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S IE  VV +  L+ G CKSG   +    F  M + G+ P+V +YT LID LCK    +
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + D M +R + P+   Y  LI+   K  S KEA+ +  +M+E GV  D+  Y +L+
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 193 WGLSRCGHLQEARVLFHEMI-GRGIL-PDEILCISLLKKHYERGNMDEAIELQNEM 246
            GLS    + EA  L  EM+ G+ I+ P+ +   S+++   + G M +A +++  M
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMM 353



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 130/257 (50%), Gaps = 2/257 (0%)

Query: 1   MKGKNI-KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           ++GKNI K ++  + ++I GLC   +   +  + + M+E G   N V    L+    +  
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  +A+ L+DEM    +E    T+ +LI G CK   V  A D    M D G+ P +  Y 
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+  +C++  +ERARNLF+EM   +   D  AY+ +I G  K    K A  L   + + 
Sbjct: 437 PLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D   Y+ ++   ++ G ++ A  +  +M   G LPD  +  SL++ +  +G +++ 
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKV 555

Query: 240 IELQNEMMGRGLLSGSK 256
           +EL  EM+ + +   SK
Sbjct: 556 LELIREMITKNIALDSK 572



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 37/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++AD+  YGT+I GLC  ++ + +  L+ EM E+G+  N V+ ++L+  Y K+G 
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +  EM +  IE  VV +  LID LCK G  ++A      M   GL PNV  Y  
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG-----------YLKHE----- 164
           LI+ +CK+  ++ A  +  +M ++ + PD   Y  LI G           +L  E     
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320

Query: 165 ---------------------SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
                                  ++A  ++  M E G  ++L  Y  L+ GL R   +++
Sbjct: 321 NIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRK 380

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A  L  EM   G+ PD      L+K   +   +D A +L + M  RG+
Sbjct: 381 AMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 3/238 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMK---ENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           Y T++  LC     + +  LL  M          N V  T LM A        +A+ LL 
Sbjct: 80  YNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLR 139

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
            M  + +   VVT+  LI GLC +  V +A++  G M + G+ PNV VY++L+ G CK  
Sbjct: 140 SMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSG 199

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
             E    +F EM ++ + PD   YT LID   K    K+A  + + M   G++ ++  Y 
Sbjct: 200 RWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN 259

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            L+  + + G ++EA  +  +M  +G+ PD +   +L+K   +   MDEA+ L  EM+
Sbjct: 260 VLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 3/211 (1%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEML---DSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           + V   T++ A  + G    A +LL  M            V++ VL+  LC   L  +A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
                M   G+  +V  Y  LI GLC    +++A  L  EM +  + P+   Y++L+ GY
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K   +++   +   M+E G++ D+  YT L+  L + G  ++A  +   M+ RG+ P+ 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    L+    + G++ EAI +  +M  +G+
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGV 286



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 1/195 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D   Y  +I G C   + + ++ LLS M++ G+         L+ A  + G 
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGM 447

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L +EM D+   + VV +  +I G CK+G ++ A +    + D GL P+   Y+ 
Sbjct: 448 MERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSI 506

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+   K   +E A  +  +M     +PD   + +LI GY       + L L   M    
Sbjct: 507 VINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566

Query: 181 VDLDLNAYTSLVWGL 195
           + LD    ++L   L
Sbjct: 567 IALDSKIISTLSTSL 581


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 111/210 (52%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  ++ T++ G C +     ++    EM++ GL A+ V  T L++   +AGE  EA  +L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM D  ++V  VT+ VLIDG CK G + EA     +M    + PNV  YTAL DGLCK+
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  L  EM  + +  +   Y +LI+G  K  + ++A+     M E G+  D+  Y
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           T+++  L +   L  A  L  EM+ +GI P
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKP 563



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 125/249 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + + AD   Y  +I GLC   + ++++ +L EM++ GL  + V  T L+D Y K G+
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + ++M+  R+   VVT+  L DGLCK G V  A +    M   GL  N+  Y +
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +E+A     +M +  + PD   YT +I    + +    A +L   M + G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  L+ G    G ++  + L   M+ + I P+     SL+K++    NM    
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 241 ELQNEMMGR 249
           E+   M+ +
Sbjct: 621 EIYKGMLSQ 629



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 125/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  YG ++ G C  S+ E +  LLSEM   GL  N V  T+++      G+ S+A+ ++
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M+   + +    F  ++ G C+ G +  A ++F  M   GL  +   YTALI+GLC+ 
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  +  EM  + +  D   YT LIDGY K     EA  + N+M +  V  ++  Y
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L  GL + G +  A  L HEM  +G+  +     SL+    + GN+++A+    +M  
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523

Query: 249 RGL 251
            GL
Sbjct: 524 AGL 526



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ +   Y ++I  LC E +  D+  ++ +M  +G+  +  + TT+M  + + G+
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A +  DEM    +    VT+  LI+GLC++G ++EA      M D GL  +   YT 
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +  A  + ++M ++ + P+   YTAL DG  K      A  L + M   G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++L++  Y SL+ GL + G+L++A     +M   G+ PD     +++    +   +D A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G+
Sbjct: 551 SLLQEMLDKGI 561



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 109/211 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y ++I GLC     E +   + +M E GL  +    TT++ A  ++ E
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SLL EMLD  I+ T+VT+ VL++G C SG V         M +  +HPN   Y +
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C +  ++    ++  M  ++++P+   Y  LI G+ K  + KEAL   + M E G
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             L  ++Y +L+  L++     EAR LF +M
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 35/251 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +  D   Y  +I G C   K  ++ L+ ++M +  +T N V  T L D   K G+
Sbjct: 416 MEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGD 475

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM    +E+ + T+  LI+GLCK+G + +A+     M + GL P+V  YT 
Sbjct: 476 VCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTT 535

Query: 121 LIDGLCKKNCIERARNLFDEM------P-----------------------------KRD 145
           +I  LC+   ++RA +L  EM      P                             +++
Sbjct: 536 IIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+TT Y +L+  Y   ++ K    +   M    V  + N Y  L+ G  +  +++EA 
Sbjct: 596 IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655

Query: 206 VLFHEMIGRGI 216
               EMI +G 
Sbjct: 656 YFHSEMIEKGF 666



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 21/228 (9%)

Query: 29  SKLLLSEMKENGLTA-----NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           S  LL  +++ G++      N V+C   +D         EA+ L  E+     E    ++
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRLPLD---------EAVQLFQEL----PEKNTCSY 256

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            +L+  LC +G +++A   F  M      P+V  Y  ++ G C  + +E A  L  EM  
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAA 313

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           R +  +  AYT++I          +A+ +   M   GV LD   +T+++ G  R G L  
Sbjct: 314 RGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           AR  F EM  RG+  D +   +L+      G + EA  +  EM  +GL
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL 421



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 77/179 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK  +  Y  ++ G C+  + E  K LL  M E  +  NT    +LM  Y     
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 +   ML   +     T+ +LI G CK+  ++EA+ +   M + G     + Y A
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI  L KK     AR LF++M K  +  +   Y   ID     ++ +  L L + + EV
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEV 734


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 119/242 (49%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y T+I G C   + E +     +MK   +  + +    L++   KA   + A  LL EM
Sbjct: 377 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 436

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            D+ +  TV TF  LID   ++G + +       M + GL PNV  Y ++++  CK   I
Sbjct: 437 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 496

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  + D+M  +D++P+   Y A+ID Y++H    +A  L  +M   G+   +  Y  L
Sbjct: 497 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 556

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL     + EA  + + +    ++PD +   +L+     RGN+D+A++LQ  M   G+
Sbjct: 557 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616

Query: 252 LS 253
            S
Sbjct: 617 KS 618



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 35/284 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK ++IK D   Y  +I GLC   +  +++ LL EM++NG+        TL+DAY + G+
Sbjct: 401 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 460

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +L EM ++ ++  VV++  +++  CK+G + EA+     M    + PN  VY A
Sbjct: 461 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 520

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           +ID                                   GLC ++ I  A  + + +    
Sbjct: 521 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 580

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +IPD  +Y  LI       +  +AL+L+ RM + G+   +  Y  L+ GL   G L E  
Sbjct: 581 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 640

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+ +M+   ++P   +   +++ + + GN  +A +L+ EM+ +
Sbjct: 641 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 684



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 122/251 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +   Y  ++ GLC   +  ++  LL EM    +  +    + L D   + G+    L
Sbjct: 266 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 325

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  + L + + +   T  +L++GLCK G V  A +    + + GL P   +Y  LI+G 
Sbjct: 326 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 385

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   +E A + F +M  R + PD   Y ALI+G  K E    A +L   M + GV+  +
Sbjct: 386 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 445

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             + +L+    R G L++  ++  EM   G+ P+ +   S++    + G + EA+ + ++
Sbjct: 446 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 505

Query: 246 MMGRGLLSGSK 256
           M  + +L  ++
Sbjct: 506 MFHKDVLPNAQ 516



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 6/254 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLS---EMKENGLTANTVICTTLMDAYFK 57
           M  + +  D   Y  +  GL   S+  DSK +LS   +  +NG+T     C+ L++   K
Sbjct: 296 MASQKMVPDGFTYSILFDGL---SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 352

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            G+ S A  +L  ++++ +  T V +  LI+G C++G +  A   FG+M    + P+   
Sbjct: 353 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 412

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y ALI+GLCK   I  A++L  EM    + P    +  LID Y +    ++   + + M 
Sbjct: 413 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 472

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E G+  ++ +Y S+V    + G + EA  +  +M  + +LP+  +  +++  + E G  D
Sbjct: 473 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 532

Query: 238 EAIELQNEMMGRGL 251
           +A  L  +M   G+
Sbjct: 533 QAFILVEKMKSNGI 546



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 5/211 (2%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           N  + N VI        ++AG   +A+ + DEM +  +    +T+  +IDG  K G +  
Sbjct: 199 NAFSYNVVIA-----GMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEA 253

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
                 +M   GL PN   Y  L+ GLC+   +     L DEM  + M+PD   Y+ L D
Sbjct: 254 GFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFD 313

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           G  ++   K  L+L  +  + GV +     + L+ GL + G +  A  +   ++  G++P
Sbjct: 314 GLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 373

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGR 249
             ++  +L+  + + G ++ A     +M  R
Sbjct: 374 TRVIYNTLINGYCQTGELEGAFSTFGQMKSR 404



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 107/274 (39%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G+    +  D+  +  EM E  +  N +   T++D + K G+      L D+M+
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID--------- 123
              ++   +T+ VL+ GLC++G + E       M    + P+   Y+ L D         
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322

Query: 124 --------------------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                     GLCK   +  A  +   +    ++P    Y  LI
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +GY +    + A +   +M    +  D   Y +L+ GL +   +  A+ L  EM   G+ 
Sbjct: 383 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 442

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P      +L+  +   G +++   + +EM   GL
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 476



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 1/134 (0%)

Query: 87  IDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +     +G + EA+    RM  D    PN   Y  +I G+ +      A  +FDEM +R 
Sbjct: 171 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 230

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+   Y  +IDG++K    +    L+++M   G+  +   Y  L+ GL R G + E  
Sbjct: 231 VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 290

Query: 206 VLFHEMIGRGILPD 219
            L  EM  + ++PD
Sbjct: 291 ALLDEMASQKMVPD 304


>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 418

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 112/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           + L++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVV 417



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMI 338



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 121/244 (49%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A L  +  ++   C E +   ++ +   + + GL  + V   TLM+ Y K G+ +E   L
Sbjct: 134 ASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            + M  S ++  V T+ VLI+GLCK   + +A + F  M D GL PN   +T LIDG CK
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              ++ A  ++ +M  + + PD   Y  LI G  K    K+A +L + M+  G+  D   
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+L+ G  + G L+ A      MI   I  D++   +L+    + G   +A ++  EM+
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 248 GRGL 251
             GL
Sbjct: 374 SVGL 377



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 116/221 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   +  M +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+  +      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYV 413



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 103/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+   CK+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 91/183 (49%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +E L+     ++  F +L+   CK G +R A   F  +  +GL P+V  +  L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +     L + M    + PD   Y+ LI+G  K     +A  L + M + G+  +   +
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304

Query: 249 RGL 251
           +GL
Sbjct: 305 KGL 307


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 127/246 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D   + T+I GLC E + +++  L +EM       NTV  T L+D   K G  SEA 
Sbjct: 152 IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEAR 211

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + + M +  +E  + T+  L++G C    + +A   F  M   G  P+V  Y+ LI+G 
Sbjct: 212 CVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGY 271

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   I+ A+ L  +M ++++IP+T  Y  L+ G     S  EA  L  +M   G+  +L
Sbjct: 272 CKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNL 331

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+ L+ GL + GHL+EA  L   M  R + PD +L   L++  +  G ++ A EL ++
Sbjct: 332 RTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSK 391

Query: 246 MMGRGL 251
           +   G+
Sbjct: 392 LFANGI 397



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 121/236 (51%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I  LC  S    +  +LS+M + G+  ++V  TTL++     G   EA+ L +EM    
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
                VTF +L+D LCK G+V EA   F  M + G+ PN+  Y AL++G C +  +  A 
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            +F+ M  +   P   +Y+ LI+GY K     EA  L  +M+E  +  +   Y +L+ GL
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                L EA+ LF +M   G+LP+      LL    + G+++EA++L   M  R L
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKL 362



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 120/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y  ++ G C+  +  D+  +   M   G   +    + L++ Y K+  
Sbjct: 217 MTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRR 276

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +LL +M +  +    VT+  L+ GLC +  + EA + F +M   G+ PN+  Y+ 
Sbjct: 277 IDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSI 336

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +E A  L   M +R + PD   Y  LI G       + A  L +++   G
Sbjct: 337 LLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANG 396

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  ++ GL + G   EA  LF +M   G LPD      +++   +  +   AI
Sbjct: 397 IRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAI 456

Query: 241 ELQNEMMGR 249
           +L +EM+GR
Sbjct: 457 QLIDEMVGR 465



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 117/239 (48%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G  +  +  + ++     L ++M   G+  N      L+++  +      A+S+L +M  
Sbjct: 90  GKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFK 149

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             I+   VTF  LI+GLC  G ++EA++ F  M      PN   +T L+D LCKK  +  
Sbjct: 150 LGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSE 209

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           AR +F+ M ++ + P+   Y AL++GY       +A  +   M   G    +++Y+ L+ 
Sbjct: 210 ARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILIN 269

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G  +   + EA+ L  +M  + ++P+ +   +L++      ++ EA EL  +M   G+L
Sbjct: 270 GYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGML 328



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 101/219 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK     +  Y  +I G C   + +++K LL++M E  L  NTV   TLM     A  
Sbjct: 252 MVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASS 311

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  +M  S +   + T+ +L+DGLCK G + EA+     M +  L P++ +Y  
Sbjct: 312 LLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNI 371

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G+     +E A+ LF ++    + P    Y  +I G LK     EA  L  +M + G
Sbjct: 372 LIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDG 431

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              D  +Y  ++ G  +      A  L  EM+GR    D
Sbjct: 432 FLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSAD 470



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 96/192 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  +   Y T++ GLC  S   +++ L  +M  +G+  N    + L+D   K G 
Sbjct: 287 MSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGH 346

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL  M + ++E  +V + +LI G+  +G +  A + F ++   G+ P+V  Y  
Sbjct: 347 LEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNI 406

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GL K+   + A  LF +M     +PD+ +Y  +I G+L+++    A+ L + M    
Sbjct: 407 MIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRR 466

Query: 181 VDLDLNAYTSLV 192
              D + +  L+
Sbjct: 467 FSADSSTFKMLL 478



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 72/150 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  Y  ++ GLC     E++  LL+ M+E  L  + V+   L+   F AG+   A  L 
Sbjct: 330 NLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELF 389

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            ++  + I  +V T+ ++I GL K GL  EA   F +M D G  P+   Y  +I G  + 
Sbjct: 390 SKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQN 449

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID 158
                A  L DEM  R    D++ +  L+D
Sbjct: 450 QDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 85/188 (45%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A++    M+      + V     +  + K       +    +M  FG+  N      LI
Sbjct: 69  DAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILI 128

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC+ + I  A ++  +M K  + PD+  +T LI+G       KEA+ L N M      
Sbjct: 129 NSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAM 188

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +   +T LV  L + G + EAR +F  M  +G+ P+     +L+  +  R  M++A ++
Sbjct: 189 PNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKV 248

Query: 243 QNEMMGRG 250
              M+G+G
Sbjct: 249 FEIMVGKG 256



 Score = 45.4 bits (106), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 50/119 (42%)

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           I+ A   F  M   +  P        +    K + +   ++L N+M   GV  +      
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           L+  L R  H+  A  +  +M   GI PD +   +L+      G + EA+EL NEM GR
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR 185


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 119/242 (49%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y T+I G C   + E +     +MK   +  + +    L++   KA   + A  LL EM
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 299

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            D+ +  TV TF  LID   ++G + +       M + GL PNV  Y ++++  CK   I
Sbjct: 300 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 359

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  + D+M  +D++P+   Y A+ID Y++H    +A  L  +M   G+   +  Y  L
Sbjct: 360 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 419

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL     + EA  + + +    ++PD +   +L+     RGN+D+A++LQ  M   G+
Sbjct: 420 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479

Query: 252 LS 253
            S
Sbjct: 480 KS 481



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 35/284 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK ++IK D   Y  +I GLC   +  +++ LL EM++NG+        TL+DAY + G+
Sbjct: 264 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 323

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +L EM ++ ++  VV++  +++  CK+G + EA+     M    + PN  VY A
Sbjct: 324 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 383

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           +ID                                   GLC ++ I  A  + + +    
Sbjct: 384 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 443

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +IPD  +Y  LI       +  +AL+L+ RM + G+   +  Y  L+ GL   G L E  
Sbjct: 444 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEME 503

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+ +M+   ++P   +   +++ + + GN  +A +L+ EM+ +
Sbjct: 504 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 547



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 122/251 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +   Y  ++ GLC   +  ++  LL EM    +  +    + L D   + G+    L
Sbjct: 129 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 188

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  + L + + +   T  +L++GLCK G V  A +    + + GL P   +Y  LI+G 
Sbjct: 189 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 248

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   +E A + F +M  R + PD   Y ALI+G  K E    A +L   M + GV+  +
Sbjct: 249 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 308

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             + +L+    R G L++  ++  EM   G+ P+ +   S++    + G + EA+ + ++
Sbjct: 309 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 368

Query: 246 MMGRGLLSGSK 256
           M  + +L  ++
Sbjct: 369 MFHKDVLPNAQ 379



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 6/254 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLS---EMKENGLTANTVICTTLMDAYFK 57
           M  + +  D   Y  +  GL   S+  DSK +LS   +  +NG+T     C+ L++   K
Sbjct: 159 MASQKMVPDGFTYSILFDGL---SRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCK 215

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            G+ S A  +L  ++++ +  T V +  LI+G C++G +  A   FG+M    + P+   
Sbjct: 216 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 275

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y ALI+GLCK   I  A++L  EM    + P    +  LID Y +    ++   + + M 
Sbjct: 276 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 335

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E G+  ++ +Y S+V    + G + EA  +  +M  + +LP+  +  +++  + E G  D
Sbjct: 336 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 395

Query: 238 EAIELQNEMMGRGL 251
           +A  L  +M   G+
Sbjct: 396 QAFILVEKMKSNGI 409



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 5/211 (2%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           N  + N VI        ++AG   +A+ + DEM +  +    +T+  +IDG  K G +  
Sbjct: 62  NAFSYNVVIA-----GMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEA 116

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
                 +M   GL PN   Y  L+ GLC+   +     L DEM  + M+PD   Y+ L D
Sbjct: 117 GFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFD 176

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           G  ++   K  L+L  +  + GV +     + L+ GL + G +  A  +   ++  G++P
Sbjct: 177 GLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 236

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGR 249
             ++  +L+  + + G ++ A     +M  R
Sbjct: 237 TRVIYNTLINGYCQTGELEGAFSTFGQMKSR 267



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/274 (21%), Positives = 107/274 (39%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G+    +  D+  +  EM E  +  N +   T++D + K G+      L D+M+
Sbjct: 66  YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 125

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID--------- 123
              ++   +T+ VL+ GLC++G + E       M    + P+   Y+ L D         
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185

Query: 124 --------------------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                     GLCK   +  A  +   +    ++P    Y  LI
Sbjct: 186 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 245

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +GY +    + A +   +M    +  D   Y +L+ GL +   +  A+ L  EM   G+ 
Sbjct: 246 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 305

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P      +L+  +   G +++   + +EM   GL
Sbjct: 306 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 339



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 1/134 (0%)

Query: 87  IDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +     +G + EA+    RM  D    PN   Y  +I G+ +      A  +FDEM +R 
Sbjct: 34  VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 93

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+   Y  +IDG++K    +    L+++M   G+  +   Y  L+ GL R G + E  
Sbjct: 94  VLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 153

Query: 206 VLFHEMIGRGILPD 219
            L  EM  + ++PD
Sbjct: 154 ALLDEMASQKMVPD 167


>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 482

 Score =  124 bits (310), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 129/255 (50%), Gaps = 4/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KGK  KAD   Y  I+ G C+  +   +  +L EM E GLT N      +++ YF+AG+
Sbjct: 188 LKGK-FKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQ 246

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA     EM   + ++ VVT+  +I GL   G ++ A + F +M   G+ P+VA + A
Sbjct: 247 TNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNA 306

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCKK+ +E A  +F+EM KR  +P++  Y  +I G       + A+ L  RM +  
Sbjct: 307 LIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDD 366

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE-- 238
            + ++  Y  L+      G +++   LF +M     LP+      L+   + R N D   
Sbjct: 367 CEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLL 426

Query: 239 -AIELQNEMMGRGLL 252
            A +L  EM+ RG L
Sbjct: 427 VAGKLLVEMVDRGFL 441



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 1/230 (0%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           F     L+S M+   L  +      + + Y   G+P  A+++   M +      + +F  
Sbjct: 108 FRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNT 167

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           ++D LCKS  V  A + F  +       +   Y  +++G C      +A  +  EM +R 
Sbjct: 168 ILDVLCKSKRVEMAYNLFKALKG-KFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERG 226

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+ T Y  +++GY +     EA      M +   D+D+  YTS++ GL   G ++ AR
Sbjct: 227 LTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRAR 286

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            +F++M+  G+LP      +L++   ++ +++ AI +  EM+ RG +  S
Sbjct: 287 NVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNS 336



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 1/212 (0%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
            M E G   +     T++D   K+     A +L  + L  + +   V++ ++++G C   
Sbjct: 152 SMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLF-KALKGKFKADCVSYNIIVNGWCLIK 210

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
              +A++    M + GL PN+  Y  +++G  +      A   F EM KR    D   YT
Sbjct: 211 RTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYT 270

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           ++I G       K A N+ N+M + GV   +  + +L+  L +   ++ A ++F EM+ R
Sbjct: 271 SVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKR 330

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           G +P+ I    +++     G M  A+EL   M
Sbjct: 331 GYVPNSITYNLVIRGLCHVGEMQRAMELMERM 362


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++GK +  D+ +Y  II  LC +    D+  L SEM    ++ + V   +L+  +   G+
Sbjct: 190 IEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQ 249

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM+   I   V TF +L+D LCK G +  A +    M   G+ P+V  Y++
Sbjct: 250 LKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSS 309

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C  N + +A+++F  M +  + P   +Y  +I+G  K +   EAL+L   M   G
Sbjct: 310 LMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKG 369

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y SL+ GL + G +  A  L  EM   GI  D +   SL+    +  ++D+AI
Sbjct: 370 IAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAI 429

Query: 241 ELQNEMMGRGL 251
            L  ++  +G+
Sbjct: 430 ALVKKIKDQGI 440



 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC   +   +  +L +++   +  + V+   ++++  K    S+A  L  EM+
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMI 226

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             RI   VVTF  LI G C  G ++EA   F  M    ++P+V  ++ L+D LCK   I 
Sbjct: 227 TKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNIT 286

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA+N+   M K+ +IPD   Y++L+DGY       +A ++ + M+ +GV    ++Y  ++
Sbjct: 287 RAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMI 346

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +   + EA  LF EM  +GI PD +   SL+    + G +  A +L +EM   G+
Sbjct: 347 NGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGI 405



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 123/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y +++ G C+ ++   +K + S M   G+  +      +++   K   
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EALSL  EM    I    VT+  LIDGLCK G +  A      M + G+  ++  Y +
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK + I++A  L  ++  + + P    Y  LIDG  K    K A ++   +   G
Sbjct: 415 LIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKG 474

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             ++   Y  ++ GL + G   EA VL  +M   GI+PD +   ++++  + +   ++A 
Sbjct: 475 YSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAE 534

Query: 241 ELQNEMMGRGLL 252
           +L  EM+ RGLL
Sbjct: 535 KLLREMIIRGLL 546



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 107/221 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +++  G+T   V    L++ Y   GE + A S+  ++L      T +TF  LI+G+C
Sbjct: 81  LSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGIC 140

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
            +G ++EA+ +   +   G H +   Y  LI+GLCK      A  +  ++  + +  D  
Sbjct: 141 LNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVV 200

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  +I+   K ++  +A  L + M    +  D+  + SL+ G    G L+EA  LFHEM
Sbjct: 201 MYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEM 260

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           + + I PD      L+    + GN+  A  +   MM +G++
Sbjct: 261 VLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVI 301



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 94/188 (50%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G    T+   TL++     G+  EAL   D ++     +  V++  LI+GLCK G  R A
Sbjct: 124 GYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAA 183

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    ++    ++ +V +Y  +I+ LCK   +  A  L+ EM  + + PD   + +LI G
Sbjct: 184 LQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILG 243

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +      KEA  L + M    ++ D+  ++ LV  L + G++  A+ +   M+ +G++PD
Sbjct: 244 FCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPD 303

Query: 220 EILCISLL 227
            +   SL+
Sbjct: 304 VVTYSSLM 311



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 90/190 (47%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           + A+SL  ++    I  T+VTF +L++  C  G +  A   F ++   G HP    +  L
Sbjct: 76  TTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTL 135

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+G+C    ++ A +  D +       D  +Y  LI+G  K    + AL +  ++    V
Sbjct: 136 INGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLV 195

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           + D+  Y  ++  L +   + +A  L+ EMI + I PD +   SL+      G + EA  
Sbjct: 196 NTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFG 255

Query: 242 LQNEMMGRGL 251
           L +EM+ + +
Sbjct: 256 LFHEMVLKNI 265


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y +++  LC     + ++  L +M   G+  N      L+  Y   G+
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM    I   VVT  +L+  LCK G ++EA D F  M   G +PNV  YT 
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTI 364

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G   K C+    +LFD M    + PD   +  LI  Y       +A+ + N M + G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y +++  L R G + +A   F++MI +G+ PD+     L++     G++ +A 
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 484

Query: 241 ELQNEMMGRGL 251
           EL +E+M  G+
Sbjct: 485 ELISEIMNNGM 495



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 121/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K D+  Y T+I  LC   K +D+    ++M + G+  +      L+  +   G 
Sbjct: 420 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ E++++ + + +V F  +I+ LCK G V +A + F    + GLHP   VY+ 
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C    +E+A  +FD M    + P+   Y  L++GY K     E L+L   M + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y  ++ GL   G    A+V FHEM   GI  ++     +L+  ++    DEAI
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAI 659

Query: 241 ELQNEM 246
            L  E+
Sbjct: 660 FLFKEL 665



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 123/249 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G     D+  Y T+I G   E     +  L  EM + G+  + V  ++++ A  KA    
Sbjct: 212 GAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A + L +M++  +     T+  LI G   +G  +EA+  F  M    + P+V   + L+
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
             LCK   I+ AR++FD M  +   P+  +YT +++GY       +  +L + M   G+ 
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 391

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  +  L+   + CG L +A ++F+EM   G+ PD +   +++      G MD+A+E 
Sbjct: 392 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451

Query: 243 QNEMMGRGL 251
            N+M+ +G+
Sbjct: 452 FNQMIDQGV 460



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +I  D+     ++  LC   K ++++ +   M   G   N    T +++ Y   G 
Sbjct: 315 MRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGC 374

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L D ML   I   + TF VLI      G++ +A+  F  M D G+ P+V  Y  
Sbjct: 375 LVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 434

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LC+   ++ A   F++M  + + PD  AY  LI G+  H S  +A  L + +   G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD+  ++S++  L + G + +A+ +F   +  G+ P  ++   L+  +   G M++A+
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKAL 554

Query: 241 ELQNEMMGRGL 251
            + + M+  G+
Sbjct: 555 RVFDAMVSAGI 565



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D+  +  +I         + + ++ +EM+++G+  + V   T++ A  + G+
Sbjct: 385 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+   ++M+D  +      +  LI G C  G + +A +    + + G+H ++  +++
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 504

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LCK   +  A+N+FD      + P    Y+ L+DGY      ++AL + + M   G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +LV G  + G + E   LF EM+ +GI P  IL   ++   +E G    A 
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624

Query: 241 ELQNEMMGRGL 251
              +EM   G+
Sbjct: 625 VKFHEMTESGI 635



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  +I G C       +K L+SE+  NG+  + V  +++++   K G 
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 514

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A ++ D  ++  +  T V + +L+DG C  G + +A+  F  M   G+ PN  VY  
Sbjct: 515 VMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK   I+   +LF EM ++ + P T  Y  +IDG  +      A    + MTE G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + ++   Y  ++ GL +     EA  LF E+    +  + I   +++   ++   ++EA 
Sbjct: 635 IAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAK 694

Query: 241 ELQNEMMGRGLL 252
           +L   +   GL+
Sbjct: 695 DLFASISRSGLV 706



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 124/251 (49%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG+N   ++  Y  ++ G   +    D   L   M  +G+  +      L+ AY   G 
Sbjct: 352 MKGQN--PNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 409

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + +EM D  ++  VVT+  +I  LC+ G + +A++ F +M D G+ P+   Y  
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    + +A+ L  E+    M  D   ++++I+   K     +A N+ +    VG
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y+ L+ G    G +++A  +F  M+  GI P++++  +L+  + + G +DE +
Sbjct: 530 LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGL 589

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G+
Sbjct: 590 SLFREMLQKGI 600



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 117/242 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + +II  LC   +  D++ +       GL    V+ + LMD Y   G+  +AL + 
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+ + IE   V +  L++G CK G + E +  F  M   G+ P+  +Y  +IDGL + 
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A+  F EM +  +  +   Y  ++ G  K+  F EA+ L   +  + V +++   
Sbjct: 618 GRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 677

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ G+ +   ++EA+ LF  +   G++P  +    ++    + G ++EA ++ + M  
Sbjct: 678 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737

Query: 249 RG 250
            G
Sbjct: 738 AG 739



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 3/205 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-GRMPDF 109
           LMD   +A  P  AL+   ++L + + V ++    L+ G C++    EA+D    R P+ 
Sbjct: 117 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPEL 176

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFK 167
           G  P+V  Y+ L+  LC +    +A +L   M +   +  PD  AY+ +IDG+ K     
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVN 236

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A +L   M + G+  D   Y+S+V  L +   + +A     +M+ +G+LP+     +L+
Sbjct: 237 KACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLI 296

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
             +   G   EA+ +  EM    +L
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSIL 321



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 3/222 (1%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS-LLDEMLDSRIEVTVVTFCVLIDGL 90
              ++   GL  N +I   L+  + +A    EAL  LL    +      V ++ +L+  L
Sbjct: 133 FFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 192

Query: 91  CKSGLVREAIDYFGRMPDFGL--HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           C  G   +A D    M + G    P+V  Y+ +IDG  K+  + +A +LF EM +R + P
Sbjct: 193 CDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D   Y++++    K  +  +A     +M   GV  +   Y +L++G S  G  +EA  +F
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            EM    ILPD +    L+    + G + EA ++ + M  +G
Sbjct: 313 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKG 354



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 100/211 (47%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  ++ G C+  K E +  +   M   G+  N V+  TL++ Y K G   E LSL  EM
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L   I+ + + + ++IDGL ++G    A   F  M + G+  N   Y  ++ GL K  C 
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCF 655

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A  LF E+   ++  +      +I G  +    +EA +L   ++  G+   +  Y+ +
Sbjct: 656 DEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIM 715

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           +  L + G ++EA  +F  M   G  PD  L
Sbjct: 716 ITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 746



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 89/184 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ +  +YGT++ G C   + ++   L  EM + G+  +T++   ++D  F+AG 
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM +S I +   T+ +++ GL K+    EAI  F  +    +  N+     
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G+ +   +E A++LF  + +  ++P    Y+ +I   +K    +EA ++ + M   G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 181 VDLD 184
            + D
Sbjct: 740 CEPD 743



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 3/177 (1%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN-L 137
           T  T+ +L+D   ++     A+ +FG++   GL  N+ +   L+ G C+    + A + L
Sbjct: 110 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDIL 169

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV--DLDLNAYTSLVWGL 195
               P+   +PD  +Y+ L+          +A +L   M E G     D+ AY++++ G 
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGF 229

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            + G + +A  LF EM+ RGI PD +   S++    +   MD+A     +M+ +G+L
Sbjct: 230 FKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286


>gi|224576655|gb|ACN57001.1| At1g03560-like protein [Capsella grandiflora]
          Length = 207

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      G   N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F          ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRN- 179

Query: 234 GNMDEAIELQNEMMGRGL 251
              +EA++L + M+ +G+
Sbjct: 180 ---EEALKLWDMMIDKGI 194



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 1/192 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        +   +  + +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            L K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + G+ 
Sbjct: 136 ALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGIT 195

Query: 183 LDLNAYTSLVWG 194
                + +L  G
Sbjct: 196 PTAACFRALSTG 207



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 1/160 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NG   N++  ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
            LI G+ K +  E A  L+D M  + + P    + AL  G
Sbjct: 168 ILISGMFKDHRNEEALKLWDMMIDKGITPTAACFRALSTG 207


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 125/273 (45%), Gaps = 31/273 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  YGTI+ G+C     + +  LLS+M+E  +  + VI + ++D   K G 
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L  EML+  I   V T+  +IDG C  G   +A      M +  ++P+V  + A
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA----------- 169
           LI    K+  +  A  L DEM  R + PDT  Y ++I G+ KH  F +A           
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD 431

Query: 170 --------------------LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
                               + L   ++  G+  +   Y +L+ G     +L  A+ LF 
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           EMI  G+ PD I C  LL    E   ++EA+EL
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALEL 524



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 15/249 (6%)

Query: 6   IKADLPLYGTIIWGLCIESK---------------FEDSKLLLSEMKENGLTANTVICTT 50
            + D+  + T++ GLC+E +               F ++  L  +M E GLT   +   T
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L++     G   EA +L+++M+   + + VVT+  +++G+CK G  + A++   +M +  
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+V +Y+A+ID LCK      A+ LF EM ++ + P+   Y  +IDG+     + +A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   M E  ++ D+  + +L+    + G L EA  L  EM+ R I PD +   S++   
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 231 YERGNMDEA 239
            +    D+A
Sbjct: 412 CKHNRFDDA 420



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 8/253 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I+G C  ++F+D+K +   M     + + V   T++D Y +A  
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 447

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + LL E+    +     T+  LI G C+   +  A D F  M   G+ P+      
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507

Query: 121 LIDGLCKKNCIERARNLFD--EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           L+ G C+   +E A  LF+  +M K D+  DT AY  +I G  K     EA +L   +  
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            GV+ D+  Y  ++ G      + +A VLFH+M   G  PD     +L++   + G +D+
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625

Query: 239 AIELQNEMMGRGL 251
           +IEL +EM   G 
Sbjct: 626 SIELISEMRSNGF 638



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 15/267 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  ++  +  +I   C   K   S     ++ + G   + V   TL+        
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191

Query: 61  PSEALSL---------------LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
            SEAL+L                D+M++  +   V+TF  LI+GLC  G V EA     +
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M   GLH +V  Y  +++G+CK    + A NL  +M +  + PD   Y+A+ID   K   
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             +A  L + M E G+  ++  Y  ++ G    G   +A+ L  +MI R I PD +   +
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLL 252
           L+    + G + EA +L +EM+ R + 
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIF 398



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 89/181 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + + A+   Y T+I G C       ++ L  EM  +G+  +T+ C  L+  + +  +  E
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L + +  S+I++  V + ++I G+CK   V EA D F  +P  G+ P+V  Y  +I 
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C K+ I  A  LF +M      PD + Y  LI G LK     +++ L + M   G   
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640

Query: 184 D 184
           D
Sbjct: 641 D 641



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 1/232 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + TII   C   + ++   LL E+   GL ANT    TL+  + +    + A  L 
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   +    +T  +L+ G C++  + EA++ F  +    +  +   Y  +I G+CK 
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A +LF  +P   + PD   Y  +I G+    +  +A  L ++M + G + D + Y
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +L+ G  + G + ++  L  EM   G   D    I ++      G +D++ 
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDA-FTIKMVADLITDGRLDKSF 661



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 15/221 (6%)

Query: 46  VICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
           V C  ++  + +   P  A+SL  +M   RI + + +F +LI   C    +  ++  FG+
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIE---------------RARNLFDEMPKRDMIPDT 150
           +   G  P+V  +  L+ GLC ++ I                 A  LFD+M +  + P  
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             +  LI+G        EA  L N+M   G+ +D+  Y ++V G+ + G  + A  L  +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M    I PD ++  +++ +  + G+  +A  L +EM+ +G+
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 17/207 (8%)

Query: 55  YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
           YFK+ +  +A+   D M+ SR   T V    +I    +      AI  + +M    +  N
Sbjct: 83  YFKSLD--DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLN 140

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID---------------G 159
           +  +  LI   C  + +  + + F ++ K    PD   +  L+                G
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           Y+    F EA+ L ++M E+G+   +  + +L+ GL   G + EA  L ++M+G+G+  D
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260

Query: 220 EILCISLLKKHYERGNMDEAIELQNEM 246
            +   +++    + G+   A+ L ++M
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKM 287


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 125/273 (45%), Gaps = 31/273 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  YGTI+ G+C     + +  LLS+M+E  +  + VI + ++D   K G 
Sbjct: 247 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 306

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L  EML+  I   V T+  +IDG C  G   +A      M +  ++P+V  + A
Sbjct: 307 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 366

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA----------- 169
           LI    K+  +  A  L DEM  R + PDT  Y ++I G+ KH  F +A           
Sbjct: 367 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD 426

Query: 170 --------------------LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
                               + L   ++  G+  +   Y +L+ G     +L  A+ LF 
Sbjct: 427 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 486

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           EMI  G+ PD I C  LL    E   ++EA+EL
Sbjct: 487 EMISHGVCPDTITCNILLYGFCENEKLEEALEL 519



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 124/244 (50%), Gaps = 10/244 (4%)

Query: 6   IKADLPLYGTIIWGLCIESKFED----------SKLLLSEMKENGLTANTVICTTLMDAY 55
            + D+  + T++ GLC+E +  +          +  L  +M E GLT   +   TL++  
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGL 231

Query: 56  FKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
              G   EA +L+++M+   + + VVT+  +++G+CK G  + A++   +M +  + P+V
Sbjct: 232 CLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV 291

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
            +Y+A+ID LCK      A+ LF EM ++ + P+   Y  +IDG+     + +A  L   
Sbjct: 292 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 351

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           M E  ++ D+  + +L+    + G L EA  L  EM+ R I PD +   S++    +   
Sbjct: 352 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 411

Query: 236 MDEA 239
            D+A
Sbjct: 412 FDDA 415



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 8/253 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I+G C  ++F+D+K +   M     + + V   T++D Y +A  
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 442

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + LL E+    +     T+  LI G C+   +  A D F  M   G+ P+      
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502

Query: 121 LIDGLCKKNCIERARNLFD--EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           L+ G C+   +E A  LF+  +M K D+  DT AY  +I G  K     EA +L   +  
Sbjct: 503 LLYGFCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 560

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            GV+ D+  Y  ++ G      + +A VLFH+M   G  PD     +L++   + G +D+
Sbjct: 561 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 620

Query: 239 AIELQNEMMGRGL 251
           +IEL +EM   G 
Sbjct: 621 SIELISEMRSNGF 633



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 10/262 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  ++  +  +I   C   K   S     ++ + G   + V   TL+        
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191

Query: 61  PSEALSL----------LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
            SEAL+L           D+M++  +   V+TF  LI+GLC  G V EA     +M   G
Sbjct: 192 ISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 251

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           LH +V  Y  +++G+CK    + A NL  +M +  + PD   Y+A+ID   K     +A 
Sbjct: 252 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 311

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L + M E G+  ++  Y  ++ G    G   +A+ L  +MI R I PD +   +L+   
Sbjct: 312 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISAS 371

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
            + G + EA +L +EM+ R + 
Sbjct: 372 VKEGKLFEAEKLCDEMLHRCIF 393



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 89/181 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + + A+   Y T+I G C       ++ L  EM  +G+  +T+ C  L+  + +  +  E
Sbjct: 456 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 515

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L + +  S+I++  V + ++I G+CK   V EA D F  +P  G+ P+V  Y  +I 
Sbjct: 516 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 575

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C K+ I  A  LF +M      PD + Y  LI G LK     +++ L + M   G   
Sbjct: 576 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 635

Query: 184 D 184
           D
Sbjct: 636 D 636



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 1/232 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + TII   C   + ++   LL E+   GL ANT    TL+  + +    + A  L 
Sbjct: 426 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 485

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   +    +T  +L+ G C++  + EA++ F  +    +  +   Y  +I G+CK 
Sbjct: 486 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 545

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A +LF  +P   + PD   Y  +I G+    +  +A  L ++M + G + D + Y
Sbjct: 546 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 605

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +L+ G  + G + ++  L  EM   G   D    I ++      G +D++ 
Sbjct: 606 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDA-FTIKMVADLITDGRLDKSF 656



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 10/216 (4%)

Query: 46  VICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
           V C  ++  + +   P  A+SL  +M   RI + + +F +LI   C    +  ++  FG+
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERA----------RNLFDEMPKRDMIPDTTAYTA 155
           +   G  P+V  +  L+ GLC ++ I  A           +LFD+M +  + P    +  
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNT 226

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI+G        EA  L N+M   G+ +D+  Y ++V G+ + G  + A  L  +M    
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I PD ++  +++ +  + G+  +A  L +EM+ +G+
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 322



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 12/202 (5%)

Query: 55  YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
           YFK+ +  +A+   D M+ SR   T V    +I    +      AI  + +M    +  N
Sbjct: 83  YFKSLD--DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLN 140

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL---- 170
           +  +  LI   C  + +  + + F ++ K    PD   +  L+ G    +   EAL    
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200

Query: 171 ------NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
                 +L ++M E+G+   +  + +L+ GL   G + EA  L ++M+G+G+  D +   
Sbjct: 201 YMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 260

Query: 225 SLLKKHYERGNMDEAIELQNEM 246
           +++    + G+   A+ L ++M
Sbjct: 261 TIVNGMCKMGDTKSALNLLSKM 282


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 124/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K + AD+  Y  +I  LC  ++     LLL +M++  +  N V   TL++ +   G+
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL+EML   +    VTF  LIDG    G  +EA+  F  M   GL P+   Y  
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK    + AR  +  M +  +      YT +IDG  K+    EA+ L N M++ G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D D+  Y++L+ G  + G  + A+ +   +   G+ P+ I+  +L+      G + EAI
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493

Query: 241 ELQNEMMGRG 250
            +   M+  G
Sbjct: 494 RIYEAMILEG 503



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 124/255 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  +   Y T+I G   E K   +  LL+EM   GL+ N V    L+D +   G 
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL +   M    +  + V++ VL+DGLCK+     A  ++ RM   G+      YT 
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   ++ A  L +EM K  + PD   Y+ALI+G+ K   FK A  +  R+  VG
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y++L++   R G L+EA  ++  MI  G   D      L+    + G + EA 
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 241 ELQNEMMGRGLLSGS 255
           E    M   G+L  +
Sbjct: 529 EFMRCMTSDGILPNT 543



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +      YG ++ GLC  ++F+ ++     MK NG+    +  T ++D   K G 
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL+EM    I+  +VT+  LI+G CK G  + A +   R+   GL PN  +Y+ 
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 121 LIDGLCKKNCIERARNLFDEM----PKRD------------------------------- 145
           LI   C+  C++ A  +++ M      RD                               
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+T ++  LI+GY       +A ++ + MT+VG       Y SL+ GL + GHL+EA 
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
                +       D ++  +LL    + GN+ +A+ L  EM+ R +L  S
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  +  +I  LC E  FE S  L+ +M+++G     V   T++  Y K G 
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ LLD M    ++  V T+ +LI  LC+S  + +       M    +HPN   Y  
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G   +  +  A  L +EM    + P+   + ALIDG++   +FKEAL +   M   G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +     +Y  L+ GL +      AR  +  M   G+    I    ++    + G +DEA+
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 241 ELQNEMMGRGL 251
            L NEM   G+
Sbjct: 424 VLLNEMSKDGI 434



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 1/235 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  LC   K  +++  +  M  +G+  NTV    L++ Y  +GE  +A S+ DEM 
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 T  T+  L+ GLCK G +REA  +   +       +  +Y  L+  +CK   + 
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYL-KHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +A +LF EM +R ++PD+  YT+LI G   K ++    L  K       V  +   YT  
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           V G+ + G  +       +M   G  PD +   +++  +   G +++  +L  EM
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 107/238 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G   E  F+++  +   M+  GLT + V    L+D   K  E   A      M 
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + + V  +T+  +IDGLCK+G + EA+     M   G+ P++  Y+ALI+G CK    +
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +   + +  + P+   Y+ LI    +    KEA+ +   M   G   D   +  LV
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             L + G + EA      M   GILP+ +    L+  +   G   +A  + +EM   G
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 98/229 (42%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E   +DS  +   M   G   +   C  ++ +  K+GE     S L EML  +I   V T
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 195

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           F +LI+ LC  G   ++     +M   G  P +  Y  ++   CKK   + A  L D M 
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 255

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
            + +  D   Y  LI    +     +   L   M +  +  +   Y +L+ G S  G + 
Sbjct: 256 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            A  L +EM+  G+ P+ +   +L+  H   GN  EA+++   M  +GL
Sbjct: 316 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 111/275 (40%), Gaps = 36/275 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG+++ GLC      +++  L  +       +TV+  TL+ A  K+G  ++A+SL  EM+
Sbjct: 581 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 640

Query: 73  DSRIEVTVVTFCVLIDGLCKSG-------LVREA-------------------------- 99
              I     T+  LI GLC+ G         +EA                          
Sbjct: 641 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 700

Query: 100 ---IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
              I +  +M + G  P++    A+IDG  +   IE+  +L  EM  ++  P+ T Y  L
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           + GY K +    +  L   +   G+  D     SLV G+     L+    +    I RG+
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             D      L+ K    G ++ A +L   M   G+
Sbjct: 821 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 111/251 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N   +L  Y  ++ G         S LL   +  NG+  + + C +L+    ++  
Sbjct: 745 MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L +L   +   +EV   TF +LI   C +G +  A D    M   G+  +     A
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  L + +  + +R +  EM K+ + P++  Y  LI+G  +    K A  +K  M    
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +     A +++V  L++CG   EA +L   M+   ++P      +L+    + GN+ EA+
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984

Query: 241 ELQNEMMGRGL 251
           EL+  M   GL
Sbjct: 985 ELRVVMSNCGL 995



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 36/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M  ++I  D   Y ++I GLC + K   + L   E +  G +  N V+ T  +D  FKAG
Sbjct: 639 MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +    +   ++M +      +VT   +IDG  + G + +  D    M +    PN+  Y 
Sbjct: 699 QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 758

Query: 120 -----------------------------------ALIDGLCKKNCIERARNLFDEMPKR 144
                                              +L+ G+C+ N +E    +      R
Sbjct: 759 ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            +  D   +  LI     +     A +L   MT +G+ LD +   ++V  L+R    QE+
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           R++ HEM  +GI P+    I L+      G++  A  ++ EM+  
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 80/165 (48%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  + I  +   Y  +I GLC     + + ++  EM  + +    V  + ++ A  K G+
Sbjct: 885  MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 944

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA  LL  ML  ++  T+ +F  L+   CK+G V EA++    M + GL  ++  Y  
Sbjct: 945  ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            LI GLC K  +  A  L++EM     + + T Y ALI G L  E+
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARET 1049



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 1/251 (0%)

Query: 4    KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            + ++ D   +  +I   C   +   +  L+  M   G++ +   C  ++    +     E
Sbjct: 818  RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 877

Query: 64   ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            +  +L EM    I      +  LI+GLC+ G ++ A      M    + P     +A++ 
Sbjct: 878  SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937

Query: 124  GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             L K    + A  L   M K  ++P   ++T L+    K+ +  EAL L+  M+  G+ L
Sbjct: 938  ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 997

Query: 184  DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE-L 242
            DL +Y  L+ GL   G +  A  L+ EM G G L +     +L++    R       + +
Sbjct: 998  DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1057

Query: 243  QNEMMGRGLLS 253
              +++ RG ++
Sbjct: 1058 LKDLLARGFIT 1068



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 98/239 (41%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+     +I G     K E +  LL EM       N      L+  Y K  + S +  L 
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             ++ + I    +T   L+ G+C+S ++   +         G+  +   +  LI   C  
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I  A +L   M    +  D     A++    ++  F+E+  + + M++ G+  +   Y
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L+ GL R G ++ A V+  EMI   I P  +   ++++   + G  DEA  L   M+
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 111/210 (52%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  ++ T++ G C +     ++    EM++ GL A+ V  T L++   +AGE  EA  +L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM D  ++V  VT+ VLIDG CK G + EA     +M    + PNV  YTAL DGLCK+
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  L  EM  + +  +   Y +LI+G  K  + ++A+     M E G+  D+  Y
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           T+++  L +   L  A  L  EM+ +GI P
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKP 563



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 125/249 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + + AD   Y  +I GLC   + ++++ +L EM++ GL  + V  T L+D Y K G+
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + ++M+  R+   VVT+  L DGLCK G V  A +    M   GL  N+  Y +
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +E+A     +M +  + PD   YT +I    + +    A +L   M + G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  L+ G    G ++  + L   M+ + I P+     SL+K++    NM    
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 241 ELQNEMMGR 249
           E+   M+ +
Sbjct: 621 EIYKGMLSQ 629



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 125/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  YG ++ G C  S+ E +  LLSEM   GL  N V  T+++      G+ S+A+ ++
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M+   + +    F  ++ G C+ G +  A ++F  M   GL  +   YTALI+GLC+ 
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  +  EM  + +  D   YT LIDGY K     EA  + N+M +  V  ++  Y
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L  GL + G +  A  L HEM  +G+  +     SL+    + GN+++A+    +M  
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523

Query: 249 RGL 251
            GL
Sbjct: 524 AGL 526



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ +   Y ++I  LC E +  D+  ++ +M  +G+  +  + TT+M  + + G+
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A +  DEM    +    VT+  LI+GLC++G ++EA      M D GL  +   YT 
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +  A  + ++M ++ + P+   YTAL DG  K      A  L + M   G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++L++  Y SL+ GL + G+L++A     +M   G+ PD     +++    +   +D A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G+
Sbjct: 551 SLLQEMLDKGI 561



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 109/211 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y ++I GLC     E +   + +M E GL  +    TT++ A  ++ E
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SLL EMLD  I+ T+VT+ VL++G C SG V         M +  +HPN   Y +
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C +  ++    ++  M  ++++P+   Y  LI G+ K  + KEAL   + M E G
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             L  ++Y +L+  L++     EAR LF +M
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 35/251 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +  D   Y  +I G C   K  ++ L+ ++M +  +T N V  T L D   K G+
Sbjct: 416 MEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGD 475

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM    +E+ + T+  LI+GLCK+G + +A+     M + GL P+V  YT 
Sbjct: 476 VCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTT 535

Query: 121 LIDGLCKKNCIERARNLFDEM------P-----------------------------KRD 145
           +I  LC+   ++RA +L  EM      P                             +++
Sbjct: 536 IIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+TT Y +L+  Y   ++ K    +   M    V  + N Y  L+ G  +  +++EA 
Sbjct: 596 IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655

Query: 206 VLFHEMIGRGI 216
               EMI +G 
Sbjct: 656 YFHSEMIEKGF 666



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 21/228 (9%)

Query: 29  SKLLLSEMKENGLTA-----NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           S  LL  +++ G++      N V+C   +D         EA+ L  E+     E    ++
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRLPLD---------EAVQLFQEL----PEKNTCSY 256

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            +L+  LC +G +++A   F  M      P+V  Y  ++ G C  + +E A  L  EM  
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAA 313

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           R +  +  AYT++I          +A+ +   M   GV LD   +T+++ G  R G L  
Sbjct: 314 RGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           AR  F EM  RG+  D +   +L+      G + EA  +  EM  +GL
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL 421



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 77/179 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK  +  Y  ++ G C+  + E  K LL  M E  +  NT    +LM  Y     
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 +   ML   +     T+ +LI G CK+  ++EA+ +   M + G     + Y A
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI  L KK     AR LF++M K  +  +   Y   ID     ++ +  L L + + EV
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEV 734


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 111/210 (52%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  ++ T++ G C +     ++    EM++ GL A+ V  T L++   +AGE  EA  +L
Sbjct: 354 DAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVL 413

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM D  ++V  VT+ VLIDG CK G + EA     +M    + PNV  YTAL DGLCK+
Sbjct: 414 QEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQ 473

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  L  EM  + +  +   Y +LI+G  K  + ++A+     M E G+  D+  Y
Sbjct: 474 GDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTY 533

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           T+++  L +   L  A  L  EM+ +GI P
Sbjct: 534 TTIIGALCQSKELDRAHSLLQEMLDKGIKP 563



 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 125/249 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + + AD   Y  +I GLC   + ++++ +L EM++ GL  + V  T L+D Y K G+
Sbjct: 381 MQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGK 440

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + ++M+  R+   VVT+  L DGLCK G V  A +    M   GL  N+  Y +
Sbjct: 441 MTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNS 500

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +E+A     +M +  + PD   YT +I    + +    A +L   M + G
Sbjct: 501 LINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKG 560

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  L+ G    G ++  + L   M+ + I P+     SL+K++    NM    
Sbjct: 561 IKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTT 620

Query: 241 ELQNEMMGR 249
           E+   M+ +
Sbjct: 621 EIYKGMLSQ 629



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 125/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  YG ++ G C  S+ E +  LLSEM   GL  N V  T+++      G+ S+A+ ++
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M+   + +    F  ++ G C+ G +  A ++F  M   GL  +   YTALI+GLC+ 
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  +  EM  + +  D   YT LIDGY K     EA  + N+M +  V  ++  Y
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L  GL + G +  A  L HEM  +G+  +     SL+    + GN+++A+    +M  
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523

Query: 249 RGL 251
            GL
Sbjct: 524 AGL 526



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ +   Y ++I  LC E +  D+  ++ +M  +G+  +  + TT+M  + + G+
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A +  DEM    +    VT+  LI+GLC++G ++EA      M D GL  +   YT 
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +  A  + ++M ++ + P+   YTAL DG  K      A  L + M   G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++L++  Y SL+ GL + G+L++A     +M   G+ PD     +++    +   +D A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G+
Sbjct: 551 SLLQEMLDKGI 561



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 109/211 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ ++  Y ++I GLC     E +   + +M E GL  +    TT++ A  ++ E
Sbjct: 486 MCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE 545

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SLL EMLD  I+ T+VT+ VL++G C SG V         M +  +HPN   Y +
Sbjct: 546 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNS 605

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C +  ++    ++  M  ++++P+   Y  LI G+ K  + KEAL   + M E G
Sbjct: 606 LMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKG 665

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             L  ++Y +L+  L++     EAR LF +M
Sbjct: 666 FRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 35/251 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +  D   Y  +I G C   K  ++ L+ ++M +  +T N V  T L D   K G+
Sbjct: 416 MEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGD 475

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM    +E+ + T+  LI+GLCK+G + +A+     M + GL P+V  YT 
Sbjct: 476 VCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTT 535

Query: 121 LIDGLCKKNCIERARNLFDEM------P-----------------------------KRD 145
           +I  LC+   ++RA +L  EM      P                             +++
Sbjct: 536 IIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKN 595

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+TT Y +L+  Y   ++ K    +   M    V  + N Y  L+ G  +  +++EA 
Sbjct: 596 IHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEAL 655

Query: 206 VLFHEMIGRGI 216
               EMI +G 
Sbjct: 656 YFHSEMIEKGF 666



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 21/228 (9%)

Query: 29  SKLLLSEMKENGLTA-----NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           S  LL  +++ G++      N V+C   +D         EA+ L  E+     E    ++
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRLPLD---------EAVQLFQEL----PEKNTCSY 256

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            +L+  LC +G +++A   F  M      P+V  Y  ++ G C  + +E A  L  EM  
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKLLSEMAA 313

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           R +  +  AYT++I          +A+ +   M   GV LD   +T+++ G  R G L  
Sbjct: 314 RGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           AR  F EM  RG+  D +   +L+      G + EA  +  EM  +GL
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL 421



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 77/179 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK  +  Y  ++ G C+  + E  K LL  M E  +  NT    +LM  Y     
Sbjct: 556 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKN 615

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 +   ML   +     T+ +LI G CK+  ++EA+ +   M + G     + Y A
Sbjct: 616 MKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNA 675

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI  L KK     AR LF++M K  +  +   Y   ID     ++ +  L L + + EV
Sbjct: 676 LIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEV 734


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K ++  YGT++ G   +    +   LL  M  NG+  N  + + L+ AY K  +
Sbjct: 219 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 278

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  +M    +    VT+  +I  LCKSG V +A+ YF +M D GL P   VY +
Sbjct: 279 VEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 338

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC  N  ERA  L  EM  R +  +T  + ++ID + K     E+  L + M  +G
Sbjct: 339 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 398

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y++L+ G    G + EA  L   M+  G+ PD +   +L+  + +   M +A+
Sbjct: 399 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDAL 458

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 459 VLFREMESSGV 469



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y +II  LC     + +  +L+ M ++G+  + +   +++  +  +G+
Sbjct: 114 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 173

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L+D LCK+G   EA   F  M   GL P +  Y  
Sbjct: 174 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGT 233

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + P+   ++ L+  Y K E  +EA+ + ++M + G
Sbjct: 234 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 293

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +++  L + G +++A + F +MI  G+ P  I+  SL+         + A 
Sbjct: 294 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 353

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 354 ELILEMLDRGI 364



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 127/253 (50%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G +   D+  Y T+I G   E   + +    +EM +  ++ N V   +++ A  KA    
Sbjct: 81  GGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVD 140

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ +L  M+ S +    +T+  ++ G C SG  +EAI +  +M   G+ P+V  Y +L+
Sbjct: 141 KAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLM 200

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK      AR +FD M KR + P+ T Y  L+ GY    +  E   L + M   G+ 
Sbjct: 201 DYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 260

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +   ++ LV   ++   ++EA ++F +M  +G+ P+ +   +++    + G +++A+  
Sbjct: 261 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 320

Query: 243 QNEMMGRGLLSGS 255
             +M+  GL  G+
Sbjct: 321 FEQMIDEGLSPGN 333



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 98/208 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  +   YG +I  LC   + ED+ L   +M + GL+   ++  +L+       +
Sbjct: 289 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+ EMLD  I +  + F  +ID  CK G V E+   F  M   G+ P++  Y+ 
Sbjct: 349 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L   M    M PD   Y+ LI+GY K    K+AL L   M   G
Sbjct: 409 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSG 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  D+  Y  ++ GL +      A+ L+
Sbjct: 469 VSPDIITYNIILQGLFQTRRTAAAKELY 496



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 104/200 (52%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y ++I GLC  +K+E ++ L+ EM + G+  NT+   +++D++ K G   E+  L D M
Sbjct: 335 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 394

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++  ++T+  LIDG C +G + EA      M   G+ P+   Y+ LI+G CK + +
Sbjct: 395 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRM 454

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A  LF EM    + PD   Y  ++ G  +      A  L   +T+ G  L+L+ Y  +
Sbjct: 455 KDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNII 514

Query: 192 VWGLSRCGHLQEARVLFHEM 211
           + GL +     +A  +F  +
Sbjct: 515 LHGLCKNKLTDDALRMFQNL 534



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 115/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y +++  LC   +  +++ +   M + GL        TL+  Y   G 
Sbjct: 184 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 243

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD M+ + I      F +L+    K   V EA+  F +M   GL+PN   Y A
Sbjct: 244 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGA 303

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK   +E A   F++M    + P    Y +LI G      ++ A  L   M + G
Sbjct: 304 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 363

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   + S++    + G + E+  LF  M+  G+ PD I   +L+  +   G MDEA 
Sbjct: 364 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 423

Query: 241 ELQNEMMGRGL 251
           +L   M+  G+
Sbjct: 424 KLLASMVSVGM 434



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 96/191 (50%), Gaps = 3/191 (1%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG--LHPNVAVYTA 120
           +A  + DE+L   I   V ++ +L++GLC     +EA++    M D G    P+V  Y+ 
Sbjct: 35  DARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G  K+  +++  + ++EM  + + P+   Y ++I    K ++  +A+ +   M + G
Sbjct: 94  VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y S+V G    G  +EA V   +M   G+ PD +   SL+    + G   EA 
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213

Query: 241 ELQNEMMGRGL 251
           ++ + M  RGL
Sbjct: 214 KIFDSMTKRGL 224



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 100/208 (48%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            + +II   C E +  +S+ L   M   G+  + +  +TL+D Y  AG+  EA  LL  M
Sbjct: 370 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASM 429

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++   VT+  LI+G CK   +++A+  F  M   G+ P++  Y  ++ GL +    
Sbjct: 430 VSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRT 489

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A+ L+  + K     + + Y  ++ G  K++   +AL +   +  + + L+   +  +
Sbjct: 490 AAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIM 549

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  L + G   EA+ LF      G++P+
Sbjct: 550 IDALLKVGRNDEAKDLFVAFSSNGLVPN 577



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 107/234 (45%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T+I G C+  K +++  LL+ M   G+  + V  +TL++ Y K     +AL
Sbjct: 399 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDAL 458

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM  S +   ++T+ +++ GL ++     A + +  +   G    ++ Y  ++ GL
Sbjct: 459 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGL 518

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK    + A  +F  +   D+  +   +  +ID  LK     EA +L    +  G+  + 
Sbjct: 519 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 578

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y  +   +   G L+E   LF  M   G   D  +   ++++  +RG +  A
Sbjct: 579 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 632



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 90/204 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K D   Y T+I G C  S+ +D+ +L  EM+ +G++ + +    ++   F+   
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L   +  S  ++ + T+ +++ GLCK+ L  +A+  F  +    L      +  
Sbjct: 489 TAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 548

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID L K    + A++LF       ++P+   Y  + +  +     +E   L   M + G
Sbjct: 549 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 608

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
             +D      +V  L + G +  A
Sbjct: 609 CTVDSGMLNFIVRELLQRGEITRA 632



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 69/123 (56%), Gaps = 3/123 (2%)

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL--DLNAYT 189
           E AR++FDE+ +R  IPD  +Y  L++G       +EAL L + M + G D   D+ +Y+
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +++ G  + G L +    ++EM+ + I P+ +   S++    +   +D+A+E+   M+  
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 250 GLL 252
           G++
Sbjct: 153 GVM 155


>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 120/247 (48%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           L  + ++++G C E K  ++K +L +++E G   + V+   L+  Y  AG+  +A  LL 
Sbjct: 119 LKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLK 178

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM     E  V++F  LI  LC    + EA+  F  M   G   +   YT LI G CK  
Sbjct: 179 EMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWG 238

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I +   L D M ++  IP+   Y  ++  + K E  +E + L   M ++G   DLN Y 
Sbjct: 239 KISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYN 298

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            ++    + G ++E   +++EM   G+ P     + ++     +  + EA E   EM+GR
Sbjct: 299 IVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGR 358

Query: 250 GLLSGSK 256
           GLLS  +
Sbjct: 359 GLLSAPQ 365



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 4/211 (1%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           ++E+G+ A+   C  L+DA  K G   EA SL ++M   R   T+  F  L+ G C+ G 
Sbjct: 79  LQESGV-AHVFGC--LLDALCKNGSVKEAASLFEDM-RIRFTPTLKHFTSLLYGWCREGK 134

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + EA     ++ + G  P++ VY  L+ G      +  A +L  EM +++  P+  ++T 
Sbjct: 135 LMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTT 194

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI      +  +EA+ +   M   G   D   YT+L+ G  + G + +   L   MI +G
Sbjct: 195 LIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQG 254

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +P+ +  + ++  H ++  ++E IEL  EM
Sbjct: 255 HIPNPMTYLHIMAAHEKKEELEECIELMEEM 285



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 5/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+     AD   Y T+I G C   K      LL  M + G   N +    +M A+ K  E
Sbjct: 215 MQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEE 274

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L++EM        +  + ++I   CK G ++E +  +  M   GL P +  +  
Sbjct: 275 LEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVI 334

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           +I G   + C+  A   F EM  R ++  P       L++  L+ E  + + ++ + +  
Sbjct: 335 MIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMT 394

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL---LKKHYERGN 235
            G DL++ A+T  +  L   GH++EA     +M+  G++P       L   L+K Y R  
Sbjct: 395 KGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQI 454

Query: 236 MDEAIELQNEM 246
             E  E   +M
Sbjct: 455 AAEITEKVRKM 465


>gi|224576645|gb|ACN56996.1| At1g03560-like protein [Capsella grandiflora]
          Length = 196

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYX 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      G   N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILIXGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             +++GLCK   +E A + F          ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  XVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILIXGMFKDH--- 177

Query: 234 GNMDEAIELQNEMMGRGL 251
              +EA++L + M+ +G+
Sbjct: 178 -RNEEALKLWDMMIDKGI 194



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 1/179 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V    +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYXVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        +   +  + +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            L K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + G+
Sbjct: 136 ALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILIXGMFKDHRNEEALKLWDMMIDKGI 194



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 1/149 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NG   N++  ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYXVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            LI G+ K +  E A  L+D M  + + P
Sbjct: 168 ILIXGMFKDHRNEEALKLWDMMIDKGITP 196


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 118/231 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y ++I       + ED   +  EM   G + + ++  + MD  FKAGE  +  +L 
Sbjct: 516 NVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALF 575

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +E+    +   V ++ +LI GL K+G  RE    F  M + GLH +V  Y  +IDG CK 
Sbjct: 576 EEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKS 635

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +++A  L +EM  + + P    Y +++DG  K +   EA  L      +GVDL++  Y
Sbjct: 636 GKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIY 695

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           +SL+ G  + G + EA ++  E++ +G+ P+      LL    +   +DEA
Sbjct: 696 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEA 746



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 123/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K + +  D+  Y  +I GL       ++  L  EMKE GL  + +   T++D + K+G+
Sbjct: 578 IKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGK 637

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL+EM    ++ TVVT+  ++DGL K   + EA   F      G+  NV +Y++
Sbjct: 638 VDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSS 697

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   I+ A  + +E+ ++ + P++  +  L+D  +K E   EA      M  + 
Sbjct: 698 LIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLK 757

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y+ ++ GL       +A V + EM  +G+ P+ I   +++    + GN+ EA 
Sbjct: 758 CSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEAR 817

Query: 241 ELQNEMMGRG 250
            L +     G
Sbjct: 818 GLFDRFKASG 827



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 117/239 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K ++  +  YG+++ GL    + +++ +L  E K  G+  N VI ++L+D + K G 
Sbjct: 648 MKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGR 707

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L+E++   +     T+  L+D L K+  + EA   F  M +    PN   Y+ 
Sbjct: 708 IDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSI 767

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLC      +A   + EM K+ + P+   YT +I G  K  +  EA  L +R    G
Sbjct: 768 MINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASG 827

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
              D   Y +++ GLS      +A ++F E   +G   +   C+ LL   ++   +++A
Sbjct: 828 GVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G     KF+++  LL   K  G   + +    ++    + G+  EAL + DEM 
Sbjct: 346 YNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMR 405

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  + T+ +LID LCK+G +  A+     M + GL PN+     +ID LCK   ++
Sbjct: 406 QDAAP-NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLD 464

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A ++F  +  +   PD+  + +LIDG  +     +A +L  +M +     ++  YTSL+
Sbjct: 465 EACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLI 524

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               +CG  ++   ++ EM+ RG  PD +L  S +   ++ G +++   L  E+  +GL+
Sbjct: 525 QNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLV 584



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 102/219 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  D+  Y T+I G C   K + +  LL EMK  GL    V   +++D   K   
Sbjct: 613 MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDR 672

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L +E     +++ VV +  LIDG  K G + EA      +   GL PN   +  
Sbjct: 673 LDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNC 732

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D L K   I+ A+  F  M      P+   Y+ +I+G      F +A      M + G
Sbjct: 733 LLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQG 792

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  +   YT+++ GL++ G++ EAR LF      G +PD
Sbjct: 793 LKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPD 831



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    +     Y T+I  L   ++ +    L  +M+E G  AN  + TTL+  + + G 
Sbjct: 194 MRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGR 253

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              ALSLLDEM  +     +V + V ID   K G V  A  +F  M   GL P+   YT 
Sbjct: 254 IDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTT 313

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK   ++ A  LF+E+     +P   AY  +I GY     F EA +L  R    G
Sbjct: 314 LIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKG 373

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               + AY  ++  L R G ++EA +  H+ + +   P+      L+    + G ++ A+
Sbjct: 374 CIPSVIAYNCILTCLGRKGKVEEA-LRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAAL 432

Query: 241 ELQNEMMGRGLL 252
           ++Q+ M   GL 
Sbjct: 433 KVQDTMKEAGLF 444



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 116/247 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   + ++I GL    + +D+  L  +M ++    N V+ T+L+  +FK G   +   + 
Sbjct: 481 DSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIY 540

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+       ++     +D + K+G V +    F  +   GL P+V  Y+ LI GL K 
Sbjct: 541 KEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKA 600

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                   LF EM ++ +  D  AY  +IDG+ K     +A  L   M   G+   +  Y
Sbjct: 601 GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTY 660

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            S+V GL++   L EA +LF E    G+  + ++  SL+    + G +DEA  +  E+M 
Sbjct: 661 GSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 720

Query: 249 RGLLSGS 255
           +GL   S
Sbjct: 721 KGLTPNS 727



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 9/243 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+  L  + K E++  +  EM+++    N      L+D   KAGE   AL + D M 
Sbjct: 381 YNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMK 439

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ +   ++T  ++ID LCK+  + EA   F  +      P+   + +LIDGL ++  ++
Sbjct: 440 EAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVD 499

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L+++M   D IP+   YT+LI  + K    ++   +   M   G   DL    S +
Sbjct: 500 DAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYM 559

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNMDEAIELQNEMMG 248
             + + G +++ R LF E+  +G++PD     IL   L+K  + R    E  +L  EM  
Sbjct: 560 DCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSR----ETYKLFYEMKE 615

Query: 249 RGL 251
           +GL
Sbjct: 616 QGL 618



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 117/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  ++     +I  LC   K +++  +   +     + ++    +L+D   + G 
Sbjct: 438 MKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGR 497

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A SL ++MLDS     VV +  LI    K G   +    +  M   G  P++ +  +
Sbjct: 498 VDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNS 557

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +D + K   +E+ R LF+E+  + ++PD  +Y+ LI G +K    +E   L   M E G
Sbjct: 558 YMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQG 617

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD+ AY +++ G  + G + +A  L  EM  +G+ P  +   S++    +   +DEA 
Sbjct: 618 LHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAY 677

Query: 241 ELQNEMMGRGL 251
            L  E    G+
Sbjct: 678 MLFEEAKSIGV 688



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 101/225 (44%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E  + L  E+K  GL  +    + L+    KAG   E   L  EM +  + + V+ +  +
Sbjct: 569 EKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTV 628

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           IDG CKSG V +A      M   GL P V  Y +++DGL K + ++ A  LF+E     +
Sbjct: 629 IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGV 688

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
             +   Y++LIDG+ K     EA  +   + + G+  +   +  L+  L +   + EA+V
Sbjct: 689 DLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQV 748

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            F  M      P+ +    ++         ++A     EM  +GL
Sbjct: 749 CFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGL 793



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/314 (22%), Positives = 126/314 (40%), Gaps = 71/314 (22%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +A++ L+ T++     E + + +  LL EMK N  TA+ V+    +D + K G+   A  
Sbjct: 235 EANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWK 294

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF----------------------- 103
              EM    +    VT+  LI  LCK+  + EA++ F                       
Sbjct: 295 FFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYG 354

Query: 104 ------------GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                        R    G  P+V  Y  ++  L +K  +E A  + DEM ++D  P+ T
Sbjct: 355 SAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLT 413

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGV------------------------------ 181
            Y  LID   K    + AL +++ M E G+                              
Sbjct: 414 TYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGL 473

Query: 182 -----DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
                  D   + SL+ GL R G + +A  L+ +M+    +P+ ++  SL++  ++ G  
Sbjct: 474 DHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRK 533

Query: 237 DEAIELQNEMMGRG 250
           ++  ++  EM+ RG
Sbjct: 534 EDGHKIYKEMVHRG 547



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 89/221 (40%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L EM   G   +  +   L+ ++ K+ +  EA  +++ M   +       +  LI  L 
Sbjct: 155 ILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALS 214

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
            +      +  F +M + G   NV ++T L+    ++  I+ A +L DEM       D  
Sbjct: 215 AANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLV 274

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y   ID + K      A    + M   G+  D   YT+L+  L +   L EA  LF E+
Sbjct: 275 LYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEEL 334

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                +P      +++  +   G  DEA  L      +G +
Sbjct: 335 DLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCI 375


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 119/242 (49%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y T+I G C   + E +     +MK   +  + +    L++   KA   + A  LL EM
Sbjct: 373 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 432

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            D+ +  TV TF  LID   ++G + +       M + GL PNV  Y ++++  CK   I
Sbjct: 433 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 492

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  + D+M  +D++P+   Y A+ID Y++H    +A  L  +M   G+   +  Y  L
Sbjct: 493 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 552

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL     + EA  + + +    ++PD +   +L+     RGN+D+A++LQ  M   G+
Sbjct: 553 IKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 612

Query: 252 LS 253
            S
Sbjct: 613 KS 614



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 35/284 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK ++IK D   Y  +I GLC   +  +++ LL EM++NG+        TL+DAY + G+
Sbjct: 397 MKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQ 456

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +L EM ++ ++  VV++  +++  CK+G + EA+     M    + PN  VY A
Sbjct: 457 LEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNA 516

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           +ID                                   GLC ++ I  A  + + +    
Sbjct: 517 IIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR 576

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +IPD  +Y  LI       +  +AL+L+ RM + G+   +  Y  L+ GL   G L E  
Sbjct: 577 LIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEME 636

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L+ +M+   ++P   +   +++ + + GN  +A +L+ EM+ +
Sbjct: 637 YLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 122/251 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +   Y  ++ GLC   +  ++  LL EM    +  +    + L D   + G+    L
Sbjct: 262 LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAML 321

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  + L + + +   T  +L++GLCK G V  A +    + + GL P   +Y  LI+G 
Sbjct: 322 SLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGY 381

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   +E A + F +M  R + PD   Y ALI+G  K E    A +L   M + GV+  +
Sbjct: 382 CQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTV 441

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             + +L+    R G L++  ++  EM   G+ P+ +   S++    + G + EA+ + ++
Sbjct: 442 ETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDD 501

Query: 246 MMGRGLLSGSK 256
           M  + +L  ++
Sbjct: 502 MFHKDVLPNAQ 512



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 126/254 (49%), Gaps = 6/254 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLS---EMKENGLTANTVICTTLMDAYFK 57
           M  + +  D   Y  +  GL   S+  DSK +LS   +  +NG+T     C+ L++   K
Sbjct: 292 MASQKMVPDGFTYSILFDGL---SRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCK 348

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            G+ S A  +L  ++++ +  T V +  LI+G C++G +  A   FG+M    + P+   
Sbjct: 349 DGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHIT 408

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y ALI+GLCK   I  A++L  EM    + P    +  LID Y +    ++   + + M 
Sbjct: 409 YNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ 468

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           E G+  ++ +Y S+V    + G + EA  +  +M  + +LP+  +  +++  + E G  D
Sbjct: 469 ENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPND 528

Query: 238 EAIELQNEMMGRGL 251
           +A  L  +M   G+
Sbjct: 529 QAFILVEKMKSNGI 542



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 5/211 (2%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           N  + N VI        ++AG   +A+ + DEM +  +    +T+  +IDG  K G +  
Sbjct: 195 NAFSYNVVIA-----GMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEA 249

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
                 +M   GL PN   Y  L+ GLC+   +     L DEM  + M+PD   Y+ L D
Sbjct: 250 GFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFD 309

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           G  ++   K  L+L  +  + GV +     + L+ GL + G +  A  +   ++  G++P
Sbjct: 310 GLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 369

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGR 249
             ++  +L+  + + G ++ A     +M  R
Sbjct: 370 TRVIYNTLINGYCQTGELEGAFSTFGQMKSR 400



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 108/274 (39%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G+    +  D+  +  EM E  +  N +   T++D + K G+     SL D+M+
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID--------- 123
              ++   +T+ VL+ GLC++G + E       M    + P+   Y+ L D         
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318

Query: 124 --------------------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                     GLCK   +  A  +   +    ++P    Y  LI
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 378

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +GY +    + A +   +M    +  D   Y +L+ GL +   +  A+ L  EM   G+ 
Sbjct: 379 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 438

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P      +L+  +   G +++   + +EM   GL
Sbjct: 439 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 472



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 1/134 (0%)

Query: 87  IDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +     +G + EA+    RM  D    PN   Y  +I G+ +      A  +FDEM +R 
Sbjct: 167 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 226

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+   Y  +IDG++K    +   +L+++M   G+  +   Y  L+ GL R G + E  
Sbjct: 227 VLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETS 286

Query: 206 VLFHEMIGRGILPD 219
            L  EM  + ++PD
Sbjct: 287 ALLDEMASQKMVPD 300


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 125/273 (45%), Gaps = 31/273 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  YGTI+ G+C     + +  LLS+M+E  +  + VI + ++D   K G 
Sbjct: 36  MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 95

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L  EML+  I   V T+  +IDG C  G   +A      M +  ++P+V  + A
Sbjct: 96  HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 155

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA----------- 169
           LI    K+  +  A  L DEM  R + PDT  Y ++I G+ KH  F +A           
Sbjct: 156 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD 215

Query: 170 --------------------LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
                               + L   ++  G+  +   Y +L+ G     +L  A+ LF 
Sbjct: 216 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 275

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           EMI  G+ PD I C  LL    E   ++EA+EL
Sbjct: 276 EMISHGVCPDTITCNILLYGFCENEKLEEALEL 308



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 8/253 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I+G C  ++F+D+K +   M     + + V   T++D Y +A  
Sbjct: 176 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 231

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + LL E+    +     T+  LI G C+   +  A D F  M   G+ P+      
Sbjct: 232 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 291

Query: 121 LIDGLCKKNCIERARNLFD--EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           L+ G C+   +E A  LF+  +M K D+  DT AY  +I G  K     EA +L   +  
Sbjct: 292 LLYGFCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 349

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            GV+ D+  Y  ++ G      + +A VLFH+M   G  PD     +L++   + G +D+
Sbjct: 350 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 409

Query: 239 AIELQNEMMGRGL 251
           +IEL +EM   G 
Sbjct: 410 SIELISEMRSNGF 422



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 107/204 (52%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E GLT   +   TL++     G   EA +L+++M+   + + VVT+  +++G+CK G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
            + A++   +M +  + P+V +Y+A+ID LCK      A+ LF EM ++ + P+   Y  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +IDG+     + +A  L   M E  ++ D+  + +L+    + G L EA  L  EM+ R 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 216 ILPDEILCISLLKKHYERGNMDEA 239
           I PD +   S++    +    D+A
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDA 204



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 89/181 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + + A+   Y T+I G C       ++ L  EM  +G+  +T+ C  L+  + +  +  E
Sbjct: 245 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 304

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L + +  S+I++  V + ++I G+CK   V EA D F  +P  G+ P+V  Y  +I 
Sbjct: 305 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 364

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C K+ I  A  LF +M      PD + Y  LI G LK     +++ L + M   G   
Sbjct: 365 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 424

Query: 184 D 184
           D
Sbjct: 425 D 425



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 93/182 (51%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M++  +   V+TF  LI+GLC  G V EA     +M   GLH +V  Y  +++G+CK   
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
            + A NL  +M +  + PD   Y+A+ID   K     +A  L + M E G+  ++  Y  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++ G    G   +A+ L  +MI R I PD +   +L+    + G + EA +L +EM+ R 
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 251 LL 252
           + 
Sbjct: 181 IF 182



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 1/232 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + TII   C   + ++   LL E+   GL ANT    TL+  + +    + A  L 
Sbjct: 215 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 274

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   +    +T  +L+ G C++  + EA++ F  +    +  +   Y  +I G+CK 
Sbjct: 275 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 334

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A +LF  +P   + PD   Y  +I G+    +  +A  L ++M + G + D + Y
Sbjct: 335 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 394

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +L+ G  + G + ++  L  EM   G   D    I ++      G +D++ 
Sbjct: 395 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDA-FTIKMVADLITDGRLDKSF 445


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 1   MKGKN-IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           + G+N +  ++  Y  +I G CI    + + L+++ M + G +AN V   T++  Y  +G
Sbjct: 585 LMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 644

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             + AL +LD M D   +    ++  LI G CK   +  A   F  M D GL PN   YT
Sbjct: 645 NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYT 704

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ALIDG CK   ++ A +L + M +    P+   Y  LI G  K  +F  A  L   M E 
Sbjct: 705 ALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE 764

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  ++  YT+++ GL + G    A  +F++MI +G LP+ +   SL++   + G ++EA
Sbjct: 765 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 824

Query: 240 IELQNEMMGRGLL 252
             L  E+   GL+
Sbjct: 825 ENLFAELERHGLI 837



 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 119/250 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +   A+L  Y TII G C       +  +L  M++ G   +    T L+  + K  +
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 680

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L +EM+D  +    VT+  LIDG CK   +  A      M   G  PNV  Y  
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 740

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL K+N    A  L   M +  + P+   YTA+IDG  K+ S   AL + N+M E G
Sbjct: 741 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 800

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y+SL+  L + G ++EA  LF E+   G++PDEI  + +++ +   G ++ A 
Sbjct: 801 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 860

Query: 241 ELQNEMMGRG 250
                M+  G
Sbjct: 861 NFLGRMIKAG 870



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 118/240 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  L    + + + ++L+ M  NGL  N V    ++  Y   G+P +A+ +++ ML
Sbjct: 563 YNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNML 622

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+  +I G C SG    A+     M D G  P+   YT LI G CK + +E
Sbjct: 623 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 682

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM    + P+   YTALIDGY K E    A +L   M   G   ++  Y  L+
Sbjct: 683 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 742

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL++  +   A  L   MI  GI P+ +   +++    + G+   A+E+ N+M+ +G L
Sbjct: 743 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 802



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 90/183 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C + K + +  LL  MK +G   N      L+    K    S A  L   M+
Sbjct: 703 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 762

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I   VVT+  +IDGLCK+G    A++ F +M + G  PN+  Y++LI  L ++  +E
Sbjct: 763 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 822

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NLF E+ +  +IPD   Y  +I+ Y+     + A N   RM + G    L  Y  L+
Sbjct: 823 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 882

Query: 193 WGL 195
            GL
Sbjct: 883 KGL 885



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 121/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ +L +Y  +I  LC +    D++ ++ ++ E+ ++ +T   T+++  + +  +
Sbjct: 376 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 435

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL + ++M     E   VT+  LI+GLC SG V EA D    M   G+ P     T 
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 495

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I  LC   C E A  LF +M  +   P+   YTALI G       K A+ L +RM+  G
Sbjct: 496 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y +L+  L     ++ A V+ + M   G+  + +    ++K +   G+  +A+
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615

Query: 241 ELQNEMMGRG 250
            + N M+ RG
Sbjct: 616 LVMNNMLQRG 625



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 118/245 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   Y ++I G C +   + +  + ++M + G   NTV  +TL++    +G  +EA 
Sbjct: 416 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 475

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EM+   I  T  T    I  LC  G   +A   F  M + G  PNV  YTALI GL
Sbjct: 476 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 535

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    ++ A  LF  M +  + P+T  Y ALI+  +++   K A  + N M   G+  ++
Sbjct: 536 CVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNI 595

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  ++ G    G  ++A ++ + M+ RG   + +   +++K + + GN   A+ + + 
Sbjct: 596 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 655

Query: 246 MMGRG 250
           M   G
Sbjct: 656 MRDGG 660



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 110/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC   +  ++  L+ EM  +G+      CT  + A    G   +A  L  +M 
Sbjct: 458 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 517

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   E  V T+  LI GLC SGL++ AI  F RM   G+ PN   Y ALI+ L +   I+
Sbjct: 518 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 577

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + + M +  +  +   Y  +I GY      K+A+ + N M + G   +L  Y +++
Sbjct: 578 YAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 637

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G    G+   A  +   M   G  PDE     L+    +   M+ A  L NEM+  GL
Sbjct: 638 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 696



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 96/189 (50%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +  +S LD +  S + + +  +  L+  L + G+    +D + RM   G+ PN+ +Y A+
Sbjct: 332 ARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 391

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+ LCK   +  A  +  ++ + +M PDT  YT++I G+ +      AL + N+M + G 
Sbjct: 392 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 451

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           + +   Y++L+ GL   G + EA  L  EMI  GILP    C   +    + G  ++A  
Sbjct: 452 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 511

Query: 242 LQNEMMGRG 250
           L  +M  +G
Sbjct: 512 LFVDMKNKG 520



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 100/219 (45%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
            M   G+  N +I   +++A  K G  ++A +++ ++ +S +     T+  +I G C+  
Sbjct: 375 RMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKH 434

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            +  A+  F +M   G  PN   Y+ LI+GLC    +  A +L  EM    ++P     T
Sbjct: 435 DLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCT 494

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
             I        +++A  L   M   G + ++  YT+L+ GL   G L+ A  LFH M   
Sbjct: 495 GPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRD 554

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           G+ P+ +   +L+    E   +  A  + N M   GL +
Sbjct: 555 GVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFT 593



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 118/275 (42%), Gaps = 26/275 (9%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + ++  Y  +I GL  ++ F  ++ L   M E G+  N V  T ++D   K G 
Sbjct: 726 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 785

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL + ++M++      ++T+  LI  L + G V EA + F  +   GL P+   Y  
Sbjct: 786 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 845

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE---------------- 164
           +I+       +E A N    M K    P    Y  LI G LK+E                
Sbjct: 846 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG-LKNEYLLADQRLAALPDVVP 904

Query: 165 --SF------KEALN-LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
             SF      ++A++ +  ++ E+   L +    +LV  LS  G   EA  L   MI +G
Sbjct: 905 NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 964

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + PD+    SLL       N+D A+ +   M  +G
Sbjct: 965 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 999



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 28/267 (10%)

Query: 9    DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
            +L  Y ++I  L  E K E+++ L +E++ +GL  + +    +++AY  +G+   A + L
Sbjct: 804  NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 863

Query: 69   DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD------FG------------ 110
              M+ +  + T+ T+ VLI GL    L+  A      +PD      FG            
Sbjct: 864  GRMIKAGCQPTLWTYGVLIKGLKNEYLL--ADQRLAALPDVVPNCSFGYQTTDQDAVSVM 921

Query: 111  ------LHP--NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
                  L P  +V V  AL+  L        A  L   M  + + PD  AY +L+   L+
Sbjct: 922  SAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 981

Query: 163  HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
              +   A+ +   M+  G ++ LN Y  L+  L +    +EAR+ F  M+ R   PD+++
Sbjct: 982  VRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVV 1041

Query: 223  CISLLKKHYERGNMDEAIELQNEMMGR 249
               L+      G  D  +E  + M  R
Sbjct: 1042 QAVLIDGLLRDGYKDLCMEFLHIMETR 1068


>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 125/247 (50%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N++ ++ +Y + +  LC +    ++     EM E GL  +    T ++  Y K G+ ++A
Sbjct: 351 NVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKA 410

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
              L EML   I  +V T+ +LI+  CKSG +  A     RM   GL P+V  +  LIDG
Sbjct: 411 FQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDG 470

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             KK  +++A  L D M    M PDT  Y ALI   +      EA ++ + +   G+  D
Sbjct: 471 FGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPD 530

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  +T ++ G S+ G+ +EA +++  M  R + PD + C +LL  +     MDEA  L  
Sbjct: 531 VMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFL 590

Query: 245 EMMGRGL 251
           +M+  GL
Sbjct: 591 KMLDAGL 597



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 122/244 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y  II G C       +   L EM + G+T +    T L++A  K+G+ + A  LL
Sbjct: 390 DCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLL 449

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M+   +   VVTF  LIDG  K G +++A +    M   G+ P+   Y ALI  L  +
Sbjct: 450 QRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIAR 509

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A+++  E+ +R + PD   +T +IDG+ K  +F+EA  + + M+E  V  D+   
Sbjct: 510 GYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTC 569

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           ++L+ G  R   + EA  LF +M+  G+ PD +L  +L+      GNM+ A  L   M+ 
Sbjct: 570 SALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMID 629

Query: 249 RGLL 252
            G L
Sbjct: 630 DGFL 633



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 97/214 (45%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I   +  Y  +I   C       ++ LL  M   GL  + V    L+D + K G   +A 
Sbjct: 422 ITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAF 481

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LLD M  + +    VT+  LI  L   G   EA D    +   GL P+V  +T +IDG 
Sbjct: 482 ELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGF 541

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            KK   E A  ++  M +R + PD    +AL++GY +     EA  L  +M + G+  DL
Sbjct: 542 SKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDL 601

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             Y +L+ G    G++  A  L   MI  G LP+
Sbjct: 602 VLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPN 635



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 3/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  +  +    I   C E   +    +L EMK  G+ A+ +  T ++DA  K   
Sbjct: 245 MQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISC 304

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SLL +M+   I V  V+   +IDG CK G   +AI+       F + PN+ VY++
Sbjct: 305 VKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNF---FNVRPNIFVYSS 361

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +  LCK   +  A   F EM +  + PD   YT +I GY K     +A      M + G
Sbjct: 362 FMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFG 421

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  YT L+    + G +  A  L   M+  G++PD +    L+    ++G + +A 
Sbjct: 422 ITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAF 481

Query: 241 ELQNEMMGRGL 251
           EL + M   G+
Sbjct: 482 ELLDIMRSAGM 492



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 88/189 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +  +I G   +   + +  LL  M+  G++ +TV    L+ +    G P+EA  +L
Sbjct: 460 DVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDIL 519

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            E++   +   V+TF  +IDG  K G   EA   +  M +  + P+V   +AL++G C+ 
Sbjct: 520 HELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRA 579

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  LF +M    + PD   Y  LI G+    +   A NL   M + G   ++  +
Sbjct: 580 RRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTH 639

Query: 189 TSLVWGLSR 197
            +   G  +
Sbjct: 640 RAFALGFEK 648



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 117/240 (48%), Gaps = 3/240 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  ++     ESK   +  L+ E+K   +  +  +C +L+ A  ++ +   A  +L+ M
Sbjct: 186 VYSMLVDCYVTESKVSLALNLIHEIKLLNIFPSMGVCNSLLKALLRSHQLDLAWDILEGM 245

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               + +      + I+  C  G ++        M ++G+  +V  YT +ID LCK +C+
Sbjct: 246 QSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALCKISCV 305

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A +L  +M    +  D+ + +++IDGY K     +A+NL N      V  ++  Y+S 
Sbjct: 306 KVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFN---VRPNIFVYSSF 362

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  L + G++ EA   F EM   G+ PD      ++  + + G++++A +   EM+  G+
Sbjct: 363 MTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLKFGI 422



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 3/221 (1%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L  M+  G+  N  I +  +++Y   G       +L EM +  I+  V+ + ++ID LC
Sbjct: 241 ILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMKNYGIKADVIAYTIVIDALC 300

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K   V+ A     +M   G+  +    +++IDG CKK   ++A NL +    R   P+  
Sbjct: 301 KISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSDKAINLLNFFNVR---PNIF 357

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++ +    K  +  EA      M+E G+  D   YT ++ G  + G + +A     EM
Sbjct: 358 VYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEM 417

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  GI P       L+    + G+M  A  L   MM  GL+
Sbjct: 418 LKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLI 458



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 4/196 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D   Y  +I  L       ++K +L E+   GL+ + +  T ++D + K G 
Sbjct: 487 MRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGN 546

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +   M +  ++  VVT   L++G C++  + EA   F +M D GL P++ +Y  
Sbjct: 547 FEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNN 606

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY----LKHESFKEALNLKNRM 176
           LI G C    +  A NL   M     +P+ T + A   G+    +K+     +L LK  +
Sbjct: 607 LIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGFEKKWVKNPELHASLKLKQIL 666

Query: 177 TEVGVDLDLNAYTSLV 192
                 LD++ + +++
Sbjct: 667 LTHSTCLDVDEHLAMM 682


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 125/236 (52%), Gaps = 2/236 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC +   + +  LL  M+  G+ A+ V   TL+     A E  +A+ L+ EM 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S IE  VV +  L+ G CKSG   +    F  M + G+ P+V +YT LID LCK    +
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + D M +R + P+   Y  LI+   K  S KEA+ +  +M+E GV  D+  Y +L+
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 193 WGLSRCGHLQEARVLFHEMI-GRGIL-PDEILCISLLKKHYERGNMDEAIELQNEM 246
            GLS    + EA  L  EM+ G+ I+ P+ +   S+++   + G M +A +++  M
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMM 353



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 130/257 (50%), Gaps = 2/257 (0%)

Query: 1   MKGKNI-KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           ++GKNI K ++  + ++I GLC   +   +  + + M+E G   N V    L+    +  
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  +A+ L+DEM    +E    T+ +LI G CK   V  A D    M D G+ P +  Y 
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+  +C++  +ERARNLF+EM   +   D  AY+ +I G  K    K A  L   + + 
Sbjct: 437 PLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D   Y+ ++   ++ G ++ A  +  +M   G LPD  +  SL++ +  +G +++ 
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKV 555

Query: 240 IELQNEMMGRGLLSGSK 256
           +EL  EM+ + +   SK
Sbjct: 556 LELIREMITKNIALDSK 572



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 37/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++AD+  YGT+I GLC  ++ + +  L+ EM E+G+  N V+ ++L+  Y K+G 
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +  EM +  IE  VV +  LID LCK G  ++A      M   GL PNV  Y  
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG-----------YLKHE----- 164
           LI+ +CK+  ++ A  +  +M ++ + PD   Y  LI G           +L  E     
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGK 320

Query: 165 ---------------------SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
                                  ++A  ++  M E G  ++L  Y  L+ GL R   +++
Sbjct: 321 NIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRK 380

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A  L  EM   G+ PD      L+K   +   +D A +L + M  RG+
Sbjct: 381 AMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 117/238 (49%), Gaps = 3/238 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMK---ENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           Y T++  LC     + +  LL  M          N V  T LM A        +A+ LL 
Sbjct: 80  YNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLR 139

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
            M  + +   VVT+  LI GLC +  V +A++  G M + G+ PNV VY++L+ G CK  
Sbjct: 140 SMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSG 199

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
             E    +F EM ++ + PD   YT LID   K    K+A  + + M   G++ ++  Y 
Sbjct: 200 RWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN 259

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            L+  + + G ++EA  +  +M  +G+ PD +   +L+K   +   MDEA+ L  EM+
Sbjct: 260 VLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 3/211 (1%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEML---DSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           + V   T++ A  + G    A +LL  M            V++ VL+  LC   L  +A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
                M   G+  +V  Y  LI GLC    +++A  L  EM +  + P+   Y++L+ GY
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K   +++   +   M+E G++ D+  YT L+  L + G  ++A  +   M+ RG+ P+ 
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    L+    + G++ EAI +  +M  +G+
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGV 286



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 1/191 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D   Y  +I G C   + + ++ LLS M++ G+         L+ A  + G 
Sbjct: 388 MTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGM 447

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L +EM D+   + VV +  +I G CK+G ++ A +    + D GL P+   Y+ 
Sbjct: 448 MERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSI 506

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+   K   +E A  +  +M     +PD   + +LI GY       + L L   M    
Sbjct: 507 VINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566

Query: 181 VDLDLNAYTSL 191
           + LD    ++L
Sbjct: 567 IALDSKIISTL 577


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 116/248 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I G CI+   E +  LL  M+ NGL A+      L+DA  K G+
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGK 420

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SL D +    I    VTF  +I+GLCK G    A  +  +M   G  P+   Y+ 
Sbjct: 421 VDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSP 480

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+ LCK        +  DEM ++D+ P T  YT +ID   K  ++  A  +  +M  +G
Sbjct: 481 FIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLG 540

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YT+ V      G L EA  +  EM   GI+ D +   +L+  H   G  D A+
Sbjct: 541 CSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAV 600

Query: 241 ELQNEMMG 248
            +   M G
Sbjct: 601 TILKHMTG 608



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 110/244 (45%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  +  ++ GLC   + E+   +L +MKE G    T     L+D + +  +  EA  
Sbjct: 227 QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEK 286

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L+EM D+ +    VT   +++  C+ G +  A+  F  M   G  PNV  Y A++ G C
Sbjct: 287 MLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFC 346

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
               + +A  L D+M +  + PD   Y  LI G       + A  L   M   G+  D  
Sbjct: 347 NVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQY 406

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y  L+  L + G + EA  LF  +  RGI P+ +   +++    + G  D A     +M
Sbjct: 407 TYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKM 466

Query: 247 MGRG 250
           +  G
Sbjct: 467 VSAG 470



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 110/245 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++   C E K E+++ +L+EM +NGL    V CT +++AY + G  S A+ + + M 
Sbjct: 268 YAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMK 327

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E  V T+  ++ G C  G V +A+    +M + G+ P+V  Y  LI G C    IE
Sbjct: 328 LKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIE 387

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M    +  D   Y  LID   K     EA +L + +   G+  +   + +++
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVI 447

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL + G    A     +M+  G  PD       ++   +     E +   +EM+ + + 
Sbjct: 448 NGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVK 507

Query: 253 SGSKN 257
             + N
Sbjct: 508 PSTVN 512



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 98/221 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G  + AD   Y  +I  LC   K +++  L   ++  G+  N+V   T+++   K G+
Sbjct: 396 MEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGK 455

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A + L++M+ +       T+   I+ LCK+   RE + +   M    + P+   YT 
Sbjct: 456 FDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTI 515

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID L K+     A  ++ +M      PD   YT  +  Y       EA N+   M + G
Sbjct: 516 VIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGG 575

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           + +D  AY +L+ G +  G    A  +   M G   +P+  
Sbjct: 576 IIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHF 616



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 113/255 (44%), Gaps = 4/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D   Y  +I G C   + +++  L  E+++  +  +  +   L DA  + GE
Sbjct: 190 MPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDA--RRGE 247

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E L +L +M +         +  L+D  C+     EA      M D GL P     TA
Sbjct: 248 --EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTA 305

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++  C++  +  A  +F+ M  +   P+   Y A++ G+       +A+ L ++M E G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ D+  Y  L+ G    GH++ A  L   M G G+  D+     L+    + G +DEA 
Sbjct: 366 VEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEAC 425

Query: 241 ELQNEMMGRGLLSGS 255
            L + +  RG+   S
Sbjct: 426 SLFDGLEYRGIRPNS 440



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 109/270 (40%), Gaps = 31/270 (11%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC  +    ++  LS M  +G   +     +L+  Y +  +   A  L D+M 
Sbjct: 132 YNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMP 191

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYF----------------------------- 103
                   V++  LI+G C++G V EA++ F                             
Sbjct: 192 LRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLY 251

Query: 104 --GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
              +M + G  P    Y AL+D  C++   E A  + +EM    ++P     TA+++ Y 
Sbjct: 252 MLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYC 311

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +      A+ +   M   G + ++  Y ++V G    G + +A  L  +M   G+ PD +
Sbjct: 312 REGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVV 371

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               L++     G+++ A  L   M G GL
Sbjct: 372 TYNLLIRGQCIDGHIESAFRLLRLMEGNGL 401



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 5/220 (2%)

Query: 32  LLSEMKENGLTANT-VICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           L + M  +G  A T      L+ A  +  +   A   L  M+ S       TF  LI G 
Sbjct: 115 LFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGY 174

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           C++  +  A D F +MP  G   +   Y ALI+G C+   ++ A  LF E+ +    PD 
Sbjct: 175 CRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDM 230

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             + AL+ G       +E L +  +M E+G      AY +LV    R    +EA  + +E
Sbjct: 231 YTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNE 290

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           M   G++P  + C +++  +   G M  A+ +   M  +G
Sbjct: 291 MFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 106/260 (40%), Gaps = 20/260 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K++K     Y  +I  L  E  +  +  +  +M   G + + V  TT + AY   G 
Sbjct: 501 MLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGR 560

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +++ EM    I V  + +  LIDG    G    A+     M      PN   +T 
Sbjct: 561 LHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNH--FTF 618

Query: 121 LI------------DGLCKKNCIERARNLFD-----EMPKRDMIPDTT-AYTALIDGYLK 162
            I            D   K   + +   L D     E+ K++ +P +  AY A+++G+ +
Sbjct: 619 FILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSE 678

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E  +L + M E  + L+ + YTSLV    +     +A  L   MIG G LP+ I 
Sbjct: 679 ERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLIS 738

Query: 223 CISLLKKHYERGNMDEAIEL 242
              LL      G  D A E+
Sbjct: 739 YQYLLSGFTAEGQADRAKEI 758



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 66/155 (42%), Gaps = 3/155 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+PL  T +W      +  D   L   MK+N + ++      +++ + +     E  SL+
Sbjct: 633 DVPLKTTSVWKTI---ELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLV 689

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M +  + +    +  L++  CK  +  +A      M   G  PN+  Y  L+ G   +
Sbjct: 690 SHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAE 749

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
              +RA+ +F  +  ++   D   +  +IDG ++ 
Sbjct: 750 GQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQ 784


>gi|224576661|gb|ACN57004.1| At1g03560-like protein [Capsella grandiflora]
          Length = 207

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      G   N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    +E
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEE 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F          ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRN- 179

Query: 234 GNMDEAIELQNEMMGRGL 251
              +EA++L + M+ +G+
Sbjct: 180 ---EEALKLWDMMIDKGI 194



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 1/192 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        +   +  + +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCRFNGXAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            L K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + G+ 
Sbjct: 136 ALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEEALKLWDMMIDKGIT 195

Query: 183 LDLNAYTSLVWG 194
                + +L  G
Sbjct: 196 PTAACFRALSTG 207



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 1/160 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NG   N++  ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGXAINSMFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
            LI G+ K +  E A  L+D M  + + P    + AL  G
Sbjct: 168 ILISGMFKDHRNEEALKLWDMMIDKGITPTAACFRALSTG 207


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 127/244 (52%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
             + K D+  Y  +I  LC E K E +   L E  + GL  N +    L+ AY K+ E  
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A  LL +M +   +  +VT+ +LI GL  SG + +A++   ++ D G+ P+ A+Y  L+
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GLCK      A+ LF EM  R+++PD   Y  LIDG+++   F EA  + +   E GV 
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVK 517

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           +D+  + +++ G  R G L EA    + M    ++PD+    +++  + ++ +M  AI++
Sbjct: 518 VDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI 577

Query: 243 QNEM 246
              M
Sbjct: 578 FRYM 581



 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K     L  +GT+I G C E  F  S  LLSE+KE GL  +      ++DA ++ G 
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY 325

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +    +  ++ +  +  V T+ +LI+ LCK G    A+ +       GL PN   Y  
Sbjct: 326 KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   CK    + A  L  +M +R   PD   Y  LI G +      +A+N+K ++ + G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y  L+ GL + G    A++LF EM+ R ILPD  +  +L+      G+ DEA 
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505

Query: 241 ELQNEMMGRGL 251
           ++ +  + +G+
Sbjct: 506 KVFSLSVEKGV 516



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 1/248 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  YG +I GL +    +D+  +  ++ + G++ +  I   LM    K G 
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EMLD  I      +  LIDG  +SG   EA   F    + G+  +V  + A
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   ++ A    + M +  ++PD   Y+ +IDGY+K +    A+ +   M +  
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK-HYERGNMDEA 239
              ++  YTSL+ G    G  + A   F EM  R ++P+ +   +L++    E   +++A
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645

Query: 240 IELQNEMM 247
           +     MM
Sbjct: 646 VYYWELMM 653



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 117/250 (46%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK    ++  Y TII G C     E++ L+  E+K  G         T+++ + K G+  
Sbjct: 233 GKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV 292

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            +  LL E+ +  + V+V     +ID   + G   +  +  G +      P+VA Y  LI
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI 352

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LCK+   E A    DE  K+ +IP+  +Y  LI  Y K + +  A  L  +M E G  
Sbjct: 353 NRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y  L+ GL   GH+ +A  +  ++I RG+ PD  +   L+    + G    A  L
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472

Query: 243 QNEMMGRGLL 252
            +EM+ R +L
Sbjct: 473 FSEMLDRNIL 482



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 107/240 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C   +++ +  LL +M E G   + V    L+     +G   +A+++  +++
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +      + +L+ GLCK+G    A   F  M D  + P+  VY  LIDG  +    +
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR +F    ++ +  D   + A+I G+ +     EAL   NRM E  +  D   Y++++
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   +  A  +F  M      P+ +   SL+     +G+   A E   EM  R L+
Sbjct: 563 DGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLV 622



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 120/320 (37%), Gaps = 91/320 (28%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  D  +Y  ++ GLC   +F  +KLL SEM +  +  +  +  TL+D + ++G+  E
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDE 503

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDFGLH----- 112
           A  +    ++  ++V VV    +I G C+SG++ EA+    RM      PD   +     
Sbjct: 504 ARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563

Query: 113 ------------------------PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                                   PNV  YT+LI+G C +   + A   F EM  RD++P
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVP 623

Query: 149 DTTAYTALI------------------------------------DGYLKHES------- 165
           +   YT LI                                     G++K  S       
Sbjct: 624 NVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEP 683

Query: 166 ----------FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
                     F E  +   RM   G      AY S +  L   G ++ A +   +M+ +G
Sbjct: 684 DGSNHGQSSLFSEFFH---RMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG 740

Query: 216 ILPDEILCISLLKKHYERGN 235
             PD +   ++L      GN
Sbjct: 741 FSPDPVSFAAILHGFCVVGN 760



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 6/212 (2%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV---REAI 100
           + + C +L+    K+    +A  + DEM D    V   + C+L+ G+C  G V   R+ I
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLI 228

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           +  GR    G  PN+  Y  +I G CK   IE A  +F E+  +  +P    +  +I+G+
Sbjct: 229 E--GRWGK-GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGF 285

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K   F  +  L + + E G+ + +    +++    R G+  +       +I     PD 
Sbjct: 286 CKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDV 345

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                L+ +  + G  + A+   +E   +GL+
Sbjct: 346 ATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 17/231 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    K ++  Y ++I G C +  F+ ++    EM+   L  N V  TTL+ +  K   
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESS 640

Query: 61  PSE-ALSLLDEMLDSRIEVTVVTFCVLIDGLCK--SGLVREAID------------YFGR 105
             E A+   + M+ ++     VTF  L+ G  K  SG V    D            +F R
Sbjct: 641 TLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHR 700

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M   G   + A Y + +  LC    ++ A    D+M K+   PD  ++ A++ G+    +
Sbjct: 701 MKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760

Query: 166 FKEALNLKN-RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
            K+  N+    + E G+++ +     L   L +   + EA  + H M+ + 
Sbjct: 761 SKQWRNMDFCNLGEKGLEVAVRYSQVLEQHLPQ-PVICEASTILHAMVEKA 810



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/259 (18%), Positives = 95/259 (36%), Gaps = 35/259 (13%)

Query: 28  DSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLI 87
           D++ +  EM + G + +      L+      G+      L++          +V +  +I
Sbjct: 188 DARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTII 247

Query: 88  DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR--- 144
            G CK G +  A   F  +   G  P +  +  +I+G CK+     +  L  E+ +R   
Sbjct: 248 GGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLR 307

Query: 145 --------------------------------DMIPDTTAYTALIDGYLKHESFKEALNL 172
                                           D  PD   Y  LI+   K    + A+  
Sbjct: 308 VSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGF 367

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            +  ++ G+  +  +Y  L+    +      A  L  +M  RG  PD +    L+     
Sbjct: 368 LDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVV 427

Query: 233 RGNMDEAIELQNEMMGRGL 251
            G+MD+A+ ++ +++ RG+
Sbjct: 428 SGHMDDAVNMKVKLIDRGV 446



 Score = 43.1 bits (100), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 41/220 (18%), Positives = 96/220 (43%), Gaps = 1/220 (0%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           LS  K++   +N   C++ +    +    +E   +L  + +  +++T      ++    +
Sbjct: 87  LSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAE 146

Query: 93  SGLVREAIDYFGRMPD-FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           SG + +A++ +  + + +   P+V    +L+  L K   +  AR ++DEM  R    D  
Sbjct: 147 SGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNY 206

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +   L+ G       +    L       G   ++  Y +++ G  + G ++ A ++F E+
Sbjct: 207 STCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKEL 266

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +G +P      +++    + G+   +  L +E+  RGL
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL 306


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 128/248 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K IK ++ +YG ++ G   E    +    L  M  NG++ +  I   +  AY K     E
Sbjct: 301 KGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDE 360

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ + D+M   R+   +VT+  LID LCK G V +A+  F +M D G+ P++ V+++L+ 
Sbjct: 361 AMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVY 420

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC  +  E+A  LF E+  + +  DT  +  L+    +     EA  L + M  VGV  
Sbjct: 421 GLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRP 480

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+ +Y +LV G    G + EA  L   ++  G+ PD++   +LL  + +   +D+A  L 
Sbjct: 481 DVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLF 540

Query: 244 NEMMGRGL 251
            EM+ +GL
Sbjct: 541 REMLMKGL 548



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+ ++ ++++GLC   K+E ++ L  E+ + G+  +TV   TLM    + G 
Sbjct: 403 MIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGR 462

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+D ML   +   V+++  L+DG C +G + EA      +   GL P+   Y  
Sbjct: 463 VMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNT 522

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK   I+ A +LF EM  + + PD   Y  ++ G  +   F EA  L   M    
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSR 582

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +++  Y  ++ GL +   + EA  +FH +  + +  D      ++    + G  ++A+
Sbjct: 583 TQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAM 642

Query: 241 ELQNEMMGRGLL 252
           +L   +   GL+
Sbjct: 643 DLFATISAYGLV 654



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D  +Y  ++  LC   +  +++ +   +   G+  N  I   L+  Y   G 
Sbjct: 263 MSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGS 322

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SE  S LD M+ + +      F ++     K  ++ EA+  F +M    L PN+  Y A
Sbjct: 323 LSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGA 382

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++ A   F++M    M PD   +++L+ G    + +++A  L   + + G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQG 442

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD   + +L+  L R G + EA+ L   M+  G+ PD I   +L+  H   G +DEA 
Sbjct: 443 IRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 241 ELQNEMMGRGL 251
           +L + ++  GL
Sbjct: 503 KLLDVIVSIGL 513



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 3/246 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENG---LTANTVICTTLMDAYFKAGEPSEAL 65
           D+  Y  ++ G C E + E++  LLS M ++G    T N V  TT++D   KA     A 
Sbjct: 163 DVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAK 222

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +   M+D  +     T+  LI G    G  +E +     M   GL P+  +Y  L+D L
Sbjct: 223 GVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYL 282

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK      ARN+FD + ++ + P+ T Y  L+ GY    S  E  +  + M   GV  D 
Sbjct: 283 CKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDH 342

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
           + +  +    ++   + EA  +F +M  + + P+ +   +L+    + G +D+A+   N+
Sbjct: 343 HIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQ 402

Query: 246 MMGRGL 251
           M+  G+
Sbjct: 403 MIDEGM 408



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 122/274 (44%), Gaps = 35/274 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC     + +K +   M + G+  N    T L+  Y   G+  E + +L EM 
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMS 264

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG-------- 124
              ++     + VL+D LCK+G   EA + F  +   G+ PNV +Y  L+ G        
Sbjct: 265 THGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLS 324

Query: 125 ---------------------------LCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                        KK  I+ A ++FD+M ++ + P+   Y ALI
Sbjct: 325 EMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALI 384

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D   K     +A+   N+M + G+  D+  ++SLV+GL      ++A  LF E++ +GI 
Sbjct: 385 DALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIR 444

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            D +   +L+      G + EA  L + M+  G+
Sbjct: 445 LDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGV 478



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 115/234 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  Y T++ G C+  + +++  LL  +   GL  + V   TL+  Y KA    +A 
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAY 537

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  EML   +   VVT+  ++ GL ++G   EA + +  M +     N+  Y  +I+GL
Sbjct: 538 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N ++ A  +F  +  +D+  D      +I   LK    ++A++L   ++  G+  D+
Sbjct: 598 CKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDV 657

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y  +   L + G L+E   LF  M   G  P+  +  +L++    RG+++ A
Sbjct: 658 ETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRA 711



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 105/244 (43%), Gaps = 42/244 (17%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDS--RIEVTVVTFCVLIDGLCKSGLVREAIDYF-GR 105
           T L+  + + G      +    +L +  R+  TV+ F  L+ GLC +  V EA D    R
Sbjct: 96  TILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVI-FSQLLKGLCDAKRVDEATDILLRR 154

Query: 106 MPDFGL--------------------------------------HPNVAVYTALIDGLCK 127
           MP+FG                                        PNV  YT +IDGLCK
Sbjct: 155 MPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCK 214

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              ++RA+ +F  M  + + P+   YT LI GYL    +KE + +   M+  G+  D   
Sbjct: 215 AQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYI 274

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  L+  L + G   EAR +F  +I +GI P+  +   LL  +   G++ E     + M+
Sbjct: 275 YAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMV 334

Query: 248 GRGL 251
           G G+
Sbjct: 335 GNGV 338



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 2/254 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I+ D   + T++  LC E +  +++ L+  M   G+  + +   TL+D +   G   E
Sbjct: 441 QGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDE 500

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LLD ++   ++   VT+  L+ G CK+  + +A   F  M   GL P+V  Y  ++ 
Sbjct: 501 AAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILH 560

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL +      A+ L+  M       +   Y  +I+G  K+    EA  + + +    + L
Sbjct: 561 GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQL 620

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD-EILCISLLKKHYERGNMDEAIEL 242
           D+     ++  L + G  ++A  LF  +   G++PD E  C+ + +   + G+++E  EL
Sbjct: 621 DIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCL-IAENLIKEGSLEELDEL 679

Query: 243 QNEMMGRGLLSGSK 256
            + M   G    S+
Sbjct: 680 FSAMEENGTAPNSR 693



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 35/237 (14%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D   Y T++ G C   + +D+  L  EM   GLT + V   T++   F+ G  SEA 
Sbjct: 513 LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 572

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA-------------------------- 99
            L   M++SR ++ + T+ ++I+GLCK+  V EA                          
Sbjct: 573 ELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGAL 632

Query: 100 ---------IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
                    +D F  +  +GL P+V  Y  + + L K+  +E    LF  M +    P++
Sbjct: 633 LKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNS 692

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
               AL+   L       A    +++ E    L+ +  + L+   SR  + Q A+ L
Sbjct: 693 RMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSL 749



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 75/175 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + ++  Y  II GLC  +  +++  +   +    L  +      ++ A  K G 
Sbjct: 578 MINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGR 637

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L   +    +   V T+C++ + L K G + E  + F  M + G  PN  +  A
Sbjct: 638 KEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNA 697

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
           L+  L  +  I RA     ++ +++   + +  + LI  Y + E  + A +L  +
Sbjct: 698 LVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSLPEK 752


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  123 bits (309), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 121/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ G   +   +    L S M  +G+  +    + L++   K  +  EA  L  EML
Sbjct: 174 FNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEML 233

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +    VTF  LIDG CK+G V  A++ + +M    L P++  Y  LI GLCKK  ++
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +ARNL +EM  + + PD   YT LIDG  K    + A   + RM E  + LD  AYT+L+
Sbjct: 294 QARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALI 353

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL + G   +A  +  EM+  G+ PD      ++ +  ++G++    +L  EM   G
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G  A+      LM  + K GE   + S+ D + 
Sbjct: 116 YFKLVWGF------------YKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIR 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  + G + +       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM  + ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 EANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++AR L +EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMI 338



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 108/221 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK +++  L  EM + GL  N V  TTL+D + K G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGK 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A +    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +E A      M + ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 417



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 105/209 (50%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK+  I  ++++FD + K  + P   ++  L++GY++
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIR 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                +   LK+ M   GV  D+  Y+ L+ GL +   + EA  LF EM+ +G++P+ + 
Sbjct: 184 QGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGKVDLAMEIYKQMLSQSL 272



 Score = 37.0 bits (84), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +NI+ D   Y  +I GLC E +  D++ +L EM   GL  ++   T +++ + K G+   
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWT 399

Query: 64  ALSLLDEMLDSRIEVTVVT 82
              LL EM       +VVT
Sbjct: 400 GSKLLKEMQRDGHVPSVVT 418


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 117/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    ++  Y  +I G C   K E + +L S M E GL  N V  TTL+      G 
Sbjct: 240 MQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGH 299

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL  M    +     T  VLID LCK G + EA  + G +   G+  N  +YT+
Sbjct: 300 LEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTS 359

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK    + A NL  ++     +PD   Y++LIDG  +     EA++L N M E G
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   +T L+    R       +++   M   G+ PD +     ++ + + G M++A 
Sbjct: 420 VQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAE 479

Query: 241 ELQNEMMGRGL 251
            +  +M+  G+
Sbjct: 480 SMMIQMIDHGV 490



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 124/278 (44%), Gaps = 35/278 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  Y T+I   C       +K  LS +   GL  ++   T+ +  Y + G  + A  L 
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF------------- 109
             M       T  T+  L+ GLC +G+VREA+  F  M      PD              
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192

Query: 110 ----------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
                           G  PNVAVY ALIDG C    +E A ++F  M  +  +P+   Y
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           T LI G+ K    + A+ L +RM E G+  ++  YT+L+ G    GHL+ A  L H M  
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEA 312

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G+ P+E  C+ L+    + G ++EA +    ++ +G+
Sbjct: 313 CGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGI 350



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 111/243 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  +Y  ++ GLC   +  ++  LL++    G   N  +   L+D Y   G+   A+ + 
Sbjct: 178 DSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIF 237

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M        V T+  LI G CKSG V  A+  + RM + GL PNV  YT LI G C +
Sbjct: 238 KGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSE 297

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A  L   M    + P+      LID   KH   +EA      + + G+ ++   Y
Sbjct: 298 GHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIY 357

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           TS++  L + G    A  L  ++I  G +PD  +  SL+        + EAI L N+M+ 
Sbjct: 358 TSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIE 417

Query: 249 RGL 251
            G+
Sbjct: 418 SGV 420



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 116/238 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C E   E +  LL  M+  GL  N   C  L+DA  K G   EA   L  ++
Sbjct: 287 YTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLV 346

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+V  V +  +ID LCKSG    A +   ++   G  P+  +Y++LIDGLC++N + 
Sbjct: 347 QKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLL 406

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L ++M +  +  +   +T LID +L+         + +RM   GV  D+  YT  +
Sbjct: 407 EAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFI 466

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               + G +++A  +  +MI  G+ P+     +L+K +   G + +A      M+  G
Sbjct: 467 RSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNG 524



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 110/249 (44%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK    ++ +Y  +I G C     E +  +   M+  G   N    T L+  + K+G+  
Sbjct: 207 GKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVE 266

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A+ L   M+++ +   VVT+  LI G C  G +  A      M   GL PN      LI
Sbjct: 267 RAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLI 326

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK   IE A+     + ++ +  +   YT++ID   K   F  A NL  ++   G  
Sbjct: 327 DALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFV 386

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D + Y+SL+ GL R   L EA  L ++MI  G+  + +    L+ KH      D    +
Sbjct: 387 PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMI 446

Query: 243 QNEMMGRGL 251
            + M   G+
Sbjct: 447 SDRMAAAGV 455



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 113/242 (46%), Gaps = 4/242 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC      ++  + + M  +G   ++ + + ++     AG   EA++LL + +
Sbjct: 147 YAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAM 206

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  V  +  LIDG C +G +  AID F  M   G  PNV  YT LI G CK   +E
Sbjct: 207 GKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVE 266

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  L+  M +  + P+   YT LI G       + A  L + M   G  L  N +T LV
Sbjct: 267 RAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACG--LAPNEWTCLV 324

Query: 193 W--GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               L + G ++EA+     ++ +GI  ++++  S++    + G  D A  L  +++  G
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384

Query: 251 LL 252
            +
Sbjct: 385 FV 386



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 4/232 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            +I  LC   + E+++  L  + + G+  N VI T+++DA  K+G+   A +L+ +++  
Sbjct: 324 VLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITE 383

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
                   +  LIDGLC+   + EAI     M + G+  N   +T LID   ++   +  
Sbjct: 384 GFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSP 443

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
           + + D M    + PD   YT  I  Y +    ++A ++  +M + GV  +L  Y +L+ G
Sbjct: 444 KMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKG 503

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDE----ILCISLLKKHYERGNMDEAIEL 242
            +  G + +A      MI  G  P++    +L   LLKK+     + ++I L
Sbjct: 504 YANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISL 555



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 16/260 (6%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  +Y ++I GLC E+K  ++  LL++M E+G+ AN V  T L+D + +         + 
Sbjct: 388 DAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMIS 447

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M  + ++  VVT+ V I   C+ G + +A     +M D G+ PN+  Y  LI G    
Sbjct: 448 DRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANL 507

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA------------LNLKNRM 176
             + +A +    M      P+  +YT L+   LK  S+ +             + +   +
Sbjct: 508 GLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEEL 567

Query: 177 TEVGVDLDLNA----YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            E  + L  ++    Y   +  LS+   L+EA+     M    + P E +   +++  Y 
Sbjct: 568 LEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYR 627

Query: 233 RGNMDEAIELQNEMMGRGLL 252
              + EA+   + M+ R  L
Sbjct: 628 MKLLKEALRFLDSMVKRNYL 647



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 1/189 (0%)

Query: 70  EMLDSRIEV-TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           E L +R+ V  + T+  LI+  C +G +  A  +   +   GL P+   YT+ + G C+ 
Sbjct: 63  ESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRT 122

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A  LF  MP+R        Y AL+ G       +EA+ +   M   G   D + Y
Sbjct: 123 GLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVY 182

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + +V GL   G   EA  L  + +G+G +P+  +  +L+  +   G+++ AI++   M  
Sbjct: 183 SIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQS 242

Query: 249 RGLLSGSKN 257
           +G L   + 
Sbjct: 243 KGCLPNVRT 251



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 62/145 (42%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y   I  L    + E++K  L  M+   LT +  + T +++  ++     EAL  LD M
Sbjct: 582 VYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSM 641

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +       + ++  +I  LC+ G    A   FG +     + +   +  LIDGL +K   
Sbjct: 642 VKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNT 701

Query: 132 ERARNLFDEMPKRDMIPDTTAYTAL 156
                L   M +++  P +  Y+ L
Sbjct: 702 ADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/200 (20%), Positives = 81/200 (40%), Gaps = 3/200 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KN   DL      +W +      E+   LL E+ +   ++ + +    +    K     E
Sbjct: 542 KNSYHDLVADSISLWKIVDMKVLEE---LLEEVIKLQCSSASYVYDCFIRCLSKVDRLEE 598

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A S L  M  + +  +   +  +I+   +  L++EA+ +   M      P +  Y  +I 
Sbjct: 599 AKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIIC 658

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LC++     A+++F ++  ++   D  A+  LIDG L+  +  +   L + M E     
Sbjct: 659 ALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRP 718

Query: 184 DLNAYTSLVWGLSRCGHLQE 203
               Y+ L   ++     QE
Sbjct: 719 GSAIYSRLTGEITVTSEAQE 738


>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Vitis vinifera]
          Length = 622

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 120/247 (48%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           L  + ++++G C E K  ++K +L +++E G   + V+   L+  Y  AG+  +A  LL 
Sbjct: 227 LKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLK 286

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM     E  V++F  LI  LC    + EA+  F  M   G   +   YT LI G CK  
Sbjct: 287 EMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWG 346

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I +   L D M ++  IP+   Y  ++  + K E  +E + L   M ++G   DLN Y 
Sbjct: 347 KISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYN 406

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            ++    + G ++E   +++EM   G+ P     + ++     +  + EA E   EM+GR
Sbjct: 407 IVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGR 466

Query: 250 GLLSGSK 256
           GLLS  +
Sbjct: 467 GLLSAPQ 473



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 1/215 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L EM + G   +  +   L+DA  K G   EA SL ++M   R   T+  F  L+ G C
Sbjct: 180 VLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDM-RIRFTPTLKHFTSLLYGWC 238

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G + EA     ++ + G  P++ VY  L+ G      +  A +L  EM +++  P+  
Sbjct: 239 REGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVM 298

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           ++T LI      +  +EA+ +   M   G   D   YT+L+ G  + G + +   L   M
Sbjct: 299 SFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNM 358

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           I +G +P+ +  + ++  H ++  ++E IEL  EM
Sbjct: 359 IQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEM 393



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 5/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+     AD   Y T+I G C   K      LL  M + G   N +    +M A+ K  E
Sbjct: 323 MQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEE 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L++EM        +  + ++I   CK G ++E +  +  M   GL P +  +  
Sbjct: 383 LEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVI 442

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           +I G   + C+  A   F EM  R ++  P       L++  L+ E  + + ++ + +  
Sbjct: 443 MIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMT 502

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL---LKKHYERGN 235
            G DL++ A+T  +  L   GH++EA     +M+  G++P       L   L+K Y R  
Sbjct: 503 KGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQI 562

Query: 236 MDEAIELQNEM 246
             E  E   +M
Sbjct: 563 AAEITEKVRKM 573



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 2/186 (1%)

Query: 66  SLLDEMLDSRIE-VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +L++EM     + V+   F VL+     + +V++AI+    MP +G  P+  V+  L+D 
Sbjct: 143 ALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDA 202

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK   ++ A +LF++M  R   P    +T+L+ G+ +     EA  +  ++ E G + D
Sbjct: 203 LCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPD 261

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y +L+ G +  G + +A  L  EM  +   P+ +   +L++    +  M+EA+ +  
Sbjct: 262 IVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFF 321

Query: 245 EMMGRG 250
           EM   G
Sbjct: 322 EMQSCG 327


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 127/251 (50%), Gaps = 1/251 (0%)

Query: 3   GKN-IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           G+N    ++  Y  +I G CI    + + L+++ M + G +AN V   T++  Y  +G  
Sbjct: 417 GRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           + AL +LD M D   +    ++  LI G CK   +  A   F  M D GL PN   YTAL
Sbjct: 477 TSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTAL 536

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           IDG CK   ++ A +L + M +    P+   Y  LI G  K  +F  A  L   M E G+
Sbjct: 537 IDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++  YT+++ GL + G    A  +F++MI +G LP+ +   SL++   + G ++EA  
Sbjct: 597 FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 656

Query: 242 LQNEMMGRGLL 252
           L  E+   GL+
Sbjct: 657 LFAELERHGLI 667



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 119/250 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +   A+L  Y TII G C       +  +L  M++ G   +    T L+  + K  +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L +EM+D  +    VT+  LIDG CK   +  A      M   G  PNV  Y  
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL K+N    A  L   M +  + P+   YTA+IDG  K+ S   AL + N+M E G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y+SL+  L + G ++EA  LF E+   G++PDEI  + +++ +   G ++ A 
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 241 ELQNEMMGRG 250
                M+  G
Sbjct: 691 NFLGRMIKAG 700



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 118/240 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  L    + + + ++L+ M  NG + N V    ++  Y   G+P +A+ +++ ML
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+  +I G C SG    A+     M D G  P+   YT LI G CK + +E
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM    + P+   YTALIDGY K E    A +L   M   G   ++  Y  L+
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL++  +   A  L   MI  GI P+ +   +++    + G+   A+E+ N+M+ +G L
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 632



 Score =  104 bits (259), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 121/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ +L +Y  +I  LC +    D++ ++ ++ E+ ++ +T   T+++  + +  +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL + ++M     E   VT+  LI+GLC SG V EA D    M   G+ P     T 
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I  LC   C E A  LF +M  +   P+   YTALI G       K A+ L +RM+  G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y +L+  L     ++ A V+ + M   G  P+ +    ++K +   G+  +A+
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 241 ELQNEMMGRG 250
            + N M+ RG
Sbjct: 446 LVMNNMLQRG 455



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 90/183 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C + K + +  LL  MK +G   N      L+    K    S A  L   M+
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I   VVT+  +IDGLCK+G    A++ F +M + G  PN+  Y++LI  L ++  +E
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NLF E+ +  +IPD   Y  +I+ Y+     + A N   RM + G    L  Y  L+
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 193 WGL 195
            GL
Sbjct: 713 KGL 715



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   Y ++I G C +   + +  + ++M + G   NTV  +TL++    +G  +EA 
Sbjct: 246 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 305

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EM+   I  T  T    I  LC  G   +A   F  M + G  PNV  YTALI GL
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    ++ A  LF  M +  + P+T  Y ALI+  +++   K A  + N M   G   ++
Sbjct: 366 CVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  ++ G    G  ++A ++ + M+ RG   + +   +++K + + GN   A+ + + 
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485

Query: 246 MMGRG 250
           M   G
Sbjct: 486 MRDGG 490



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 110/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC   +  ++  L+ EM  +G+      CT  + A    G   +A  L  +M 
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   E  V T+  LI GLC SG+++ AI  F RM   G+ PN   Y ALI+ L +   I+
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + + M +    P+   Y  +I GY      K+A+ + N M + G   +L  Y +++
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G    G+   A  +   M   G  PDE     L+    +   M+ A  L NEM+  GL
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 96/189 (50%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +  +S LD +  S + + +  +  L+  L + G+    +D + RM   G+ PN+ +Y A+
Sbjct: 162 ARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+ LCK   +  A  +  ++ + +M PDT  YT++I G+ +      AL + N+M + G 
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           + +   Y++L+ GL   G + EA  L  EMI  GILP    C   +    + G  ++A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 242 LQNEMMGRG 250
           L  +M  +G
Sbjct: 342 LFVDMKNKG 350



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 118/275 (42%), Gaps = 26/275 (9%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + ++  Y  +I GL  ++ F  ++ L   M E G+  N V  T ++D   K G 
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL + ++M++      ++T+  LI  L + G V EA + F  +   GL P+   Y  
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE---------------- 164
           +I+       +E A N    M K    P    Y  LI G LK+E                
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG-LKNEYLLADQRLAALPDVVP 734

Query: 165 --SF------KEALN-LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
             SF      ++A++ +  ++ E+   L +    +LV  LS  G   EA  L   MI +G
Sbjct: 735 NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 794

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + PD+    SLL       N+D A+ +   M  +G
Sbjct: 795 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 28/267 (10%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  Y ++I  L  E K E+++ L +E++ +GL  + +    +++AY  +G+   A + L
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 693

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD------FG------------ 110
             M+ +  + T+ T+ VLI GL    L+  A      +PD      FG            
Sbjct: 694 GRMIKAGCQPTLWTYGVLIKGLKNEYLL--ADQRLAALPDVVPNCSFGYQTTDQDAVSVM 751

Query: 111 ------LHP--NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
                 L P  +V V  AL+  L        A  L   M  + + PD  AY +L+   L+
Sbjct: 752 SAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             +   A+ +   M+  G ++ LN Y  L+  L +    +EAR+ F  M+ R   PD+++
Sbjct: 812 VRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVV 871

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGR 249
              L+      G  D  +E  + M  R
Sbjct: 872 QAVLIDGLLRDGYKDLCMEFLHIMETR 898



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 100/224 (44%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
            L  + ++GL       + L+    + G  +  +     ML   ++  ++ +  +I+ LC
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G V +A     ++ +  + P+   YT++I G C+K+ ++ A  +F++M K    P+T 
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ LI+G        EA +L   M   G+    +  T  +  L   G  ++A  LF +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             +G  P+     +L+      G +  AI L + M   G+   +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390


>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 647

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 122/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++    +Y  +I GLC + K  +   +   M   G  AN  I T L+D+  K G 
Sbjct: 310 MDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGN 369

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L   M    +E   VT+ V+++ LCKSG + EA++Y       G+  N   Y++
Sbjct: 370 MGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSS 429

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGL K   ++ A  +F EM K+   PD+  Y ALID   K     EAL L  RM   G
Sbjct: 430 LIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDG 489

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            D  +  YT L+ GL R    +EA  L+  MI +GI P      +L       G +  A 
Sbjct: 490 CDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARAC 549

Query: 241 ELQNEMMGRGLL 252
           ++ +EM   G++
Sbjct: 550 KILDEMAPMGVI 561



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 114/246 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  D+  Y T+I G C   K   +   L  M+   +  + +   TL+ A +  G+
Sbjct: 240 MENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGD 299

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L L  EM +  +E+    + ++I GLCK G   E    F  M   G   NVA+YTA
Sbjct: 300 FDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTA 359

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K   +  A  LF  M K  + PD   Y  +++   K     EAL      +  G
Sbjct: 360 LIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKG 419

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V ++   Y+SL+ GL + G + EA  +F+EM+ +G  PD     +L+    + G +DEA+
Sbjct: 420 VAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEAL 479

Query: 241 ELQNEM 246
            L   M
Sbjct: 480 ALSKRM 485



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 111/250 (44%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K K    +L  Y ++I  L      +  K + S+ KE GL        +L+ ++   G  
Sbjct: 136 KQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMV 195

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            E L +   M ++ IE ++ ++  L++GL  S  +  A   F  M +  + P+V  Y  +
Sbjct: 196 EEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTM 255

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I G C+     +A      M  R++ PD   Y  LI        F   L L + M E G+
Sbjct: 256 IKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGL 315

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           ++  + Y+ ++ GL + G   E   +F  MI +G   +  +  +L+  + + GNM EA+ 
Sbjct: 316 EIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAML 375

Query: 242 LQNEMMGRGL 251
           L   M   GL
Sbjct: 376 LFKRMKKEGL 385



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 114/252 (45%), Gaps = 5/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  KA++ +Y  +I          ++ LL   MK+ GL  + V    ++++  K+G 
Sbjct: 345 MISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGR 404

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL  ++      + V  + +  LIDGL KSG V EA   F  M   G  P+   Y A
Sbjct: 405 LDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNA 464

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID L K   I+ A  L   M           YT LI G  +    +EAL L + M + G
Sbjct: 465 LIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKG 524

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL--CISLLKKHYERGNMDE 238
           +     A+ +L  GL   G +  A  +  EM   G++P+      I++L K    G + E
Sbjct: 525 ITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPETAFDDMINILCKA---GRIKE 581

Query: 239 AIELQNEMMGRG 250
           A +L + ++ RG
Sbjct: 582 ACKLADGIVDRG 593



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 1/213 (0%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK +  +   Y ++I GL    + ++++ +  EM + G   ++     L+DA  K G+  
Sbjct: 417 GKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKID 476

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL+L   M     + TV T+ +LI GL +     EA+  +  M D G+ P  A + AL 
Sbjct: 477 EALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALS 536

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GLC    + RA  + DEM    +IP+T A+  +I+   K    KEA  L + + + G +
Sbjct: 537 TGLCLSGKVARACKILDEMAPMGVIPET-AFDDMINILCKAGRIKEACKLADGIVDRGRE 595

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +     T L+  L + G+   A  L    IG G
Sbjct: 596 IPGRVRTVLINALRKAGNADLALKLMRSKIGIG 628


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 127/251 (50%), Gaps = 1/251 (0%)

Query: 3   GKN-IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           G+N    ++  Y  +I G CI    + + L+++ M + G +AN V   T++  Y  +G  
Sbjct: 417 GRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNT 476

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           + AL +LD M D   +    ++  LI G CK   +  A   F  M D GL PN   YTAL
Sbjct: 477 TSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTAL 536

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           IDG CK   ++ A +L + M +    P+   Y  LI G  K  +F  A  L   M E G+
Sbjct: 537 IDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGI 596

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++  YT+++ GL + G    A  +F++MI +G LP+ +   SL++   + G ++EA  
Sbjct: 597 FPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAEN 656

Query: 242 LQNEMMGRGLL 252
           L  E+   GL+
Sbjct: 657 LFAELERHGLI 667



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 119/250 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +   A+L  Y TII G C       +  +L  M++ G   +    T L+  + K  +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L +EM+D  +    VT+  LIDG CK   +  A      M   G  PNV  Y  
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL K+N    A  L   M +  + P+   YTA+IDG  K+ S   AL + N+M E G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y+SL+  L + G ++EA  LF E+   G++PDEI  + +++ +   G ++ A 
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 241 ELQNEMMGRG 250
                M+  G
Sbjct: 691 NFLGRMIKAG 700



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 118/240 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  L    + + + ++L+ M  NG + N V    ++  Y   G+P +A+ +++ ML
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+  +I G C SG    A+     M D G  P+   YT LI G CK + +E
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM    + P+   YTALIDGY K E    A +L   M   G   ++  Y  L+
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL++  +   A  L   MI  GI P+ +   +++    + G+   A+E+ N+M+ +G L
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 632



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 121/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ +L +Y  +I  LC +    D++ ++ ++ E+ ++ +T   T+++  + +  +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL + ++M     E   VT+  LI+GLC SG V EA D    M   G+ P     T 
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I  LC   C E A  LF +M  +   P+   YTALI G       K A+ L +RM+  G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y +L+  L     ++ A V+ + M   G  P+ +    ++K +   G+  +A+
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 241 ELQNEMMGRG 250
            + N M+ RG
Sbjct: 446 LVMNNMLQRG 455



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 90/183 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C + K + +  LL  MK +G   N      L+    K    S A  L   M+
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I   VVT+  +IDGLCK+G    A++ F +M + G  PN+  Y++LI  L ++  +E
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NLF E+ +  +IPD   Y  +I+ Y+     + A N   RM + G    L  Y  L+
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 193 WGL 195
            GL
Sbjct: 713 KGL 715



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   Y ++I G C +   + +  + ++M + G   NTV  +TL++    +G  +EA 
Sbjct: 246 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 305

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EM+   I  T  T    I  LC  G   +A   F  M + G  PNV  YTALI GL
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    ++ A  LF  M +  + P+T  Y ALI+  +++   K A  + N M   G   ++
Sbjct: 366 CVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  ++ G    G  ++A ++ + M+ RG   + +   +++K + + GN   A+ + + 
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485

Query: 246 MMGRG 250
           M   G
Sbjct: 486 MRDGG 490



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 110/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC   +  ++  L+ EM  +G+      CT  + A    G   +A  L  +M 
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   E  V T+  LI GLC SGL++ AI  F RM   G+ PN   Y ALI+ L +   I+
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + + M +    P+   Y  +I GY      K+A+ + N M + G   +L  Y +++
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G    G+   A  +   M   G  PDE     L+    +   M+ A  L NEM+  GL
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 96/189 (50%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +  +S LD +  S + + +  +  L+  L + G+    +D + RM   G+ PN+ +Y A+
Sbjct: 162 ARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+ LCK   +  A  +  ++ + +M PDT  YT++I G+ +      AL + N+M + G 
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           + +   Y++L+ GL   G + EA  L  EMI  GILP    C   +    + G  ++A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 242 LQNEMMGRG 250
           L  +M  +G
Sbjct: 342 LFVDMKNKG 350



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 118/275 (42%), Gaps = 26/275 (9%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + ++  Y  +I GL  ++ F  ++ L   M E G+  N V  T ++D   K G 
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL + ++M++      ++T+  LI  L + G V EA + F  +   GL P+   Y  
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE---------------- 164
           +I+       +E A N    M K    P    Y  LI G LK+E                
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG-LKNEYLLADQRLAALPDVVP 734

Query: 165 --SF------KEALN-LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
             SF      ++A++ +  ++ E+   L +    +LV  LS  G   EA  L   MI +G
Sbjct: 735 NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 794

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + PD+    SLL       N+D A+ +   M  +G
Sbjct: 795 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 28/267 (10%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  Y ++I  L  E K E+++ L +E++ +GL  + +    +++AY  +G+   A + L
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 693

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD------FG------------ 110
             M+ +  + T+ T+ VLI GL    L+  A      +PD      FG            
Sbjct: 694 GRMIKAGCQPTLWTYGVLIKGLKNEYLL--ADQRLAALPDVVPNCSFGYQTTDQDAVSVM 751

Query: 111 ------LHP--NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
                 L P  +V V  AL+  L        A  L   M  + + PD  AY +L+   L+
Sbjct: 752 SAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             +   A+ +   M+  G ++ LN Y  L+  L +    +EAR+ F  M+ R   PD+++
Sbjct: 812 VRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVV 871

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGR 249
              L+      G  D  +E  + M  R
Sbjct: 872 QAVLIDGLLRDGYKDLCMEFLHIMETR 898



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 100/224 (44%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
            L  + ++GL       + L+    + G  +  +     ML   ++  ++ +  +I+ LC
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G V +A     ++ +  + P+   YT++I G C+K+ ++ A  +F++M K    P+T 
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ LI+G        EA +L   M   G+    +  T  +  L   G  ++A  LF +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             +G  P+     +L+      G +  AI L + M   G+   +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 124/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K + AD+  Y  +I  LC  ++     LLL +M++  +  N V   TL++ +   G+
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL+EML   +    VTF  LIDG    G  +EA+  F  M   GL P+   Y  
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK    + AR  +  M +  +      YT +IDG  K+    EA+ L N M++ G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D D+  Y++L+ G  + G  + A+ +   +   G+ P+ I+  +L+      G + EAI
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493

Query: 241 ELQNEMMGRG 250
            +   M+  G
Sbjct: 494 RIYEAMILEG 503



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 124/255 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  +   Y T+I G   E K   +  LL+EM   GL+ N V    L+D +   G 
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL +   M    +  + V++ VL+DGLCK+     A  ++ RM   G+      YT 
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   ++ A  L +EM K  + PD   Y+ALI+G+ K   FK A  +  R+  VG
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y++L++   R G L+EA  ++  MI  G   D      L+    + G + EA 
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 241 ELQNEMMGRGLLSGS 255
           E    M   G+L  +
Sbjct: 529 EFMRCMTSDGILPNT 543



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +      YG ++ GLC  ++F+ ++     MK NG+    +  T ++D   K G 
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL+EM    I+  +VT+  LI+G CK G  + A +   R+   GL PN  +Y+ 
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478

Query: 121 LIDGLCKKNCIERARNLFDEM----PKRD------------------------------- 145
           LI   C+  C++ A  +++ M      RD                               
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+T ++  LI+GY       +A ++ + MT+VG       Y SL+ GL + GHL+EA 
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
                +       D ++  +LL    + GN+ +A+ L  EM+ R +L  S
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  +  +I  LC E  FE S  L+ +M+++G     V   T++  Y K G 
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ LLD M    ++  V T+ +LI  LC+S  + +       M    +HPN   Y  
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G   +  +  A  L +EM    + P+   + ALIDG++   +FKEAL +   M   G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +     +Y  L+ GL +      AR  +  M   G+    I    ++    + G +DEA+
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 241 ELQNEMMGRGL 251
            L NEM   G+
Sbjct: 424 VLLNEMSKDGI 434



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 115/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  Y  +I G C   +F+ +K ++  +   GL+ N +I +TL+    + G 
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + + M+         TF VL+  LCK+G V EA ++   M   G+ PN   +  
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G        +A ++FDEM K    P    Y +L+ G  K    +EA      +  V 
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 608

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +D   Y +L+  + + G+L +A  LF EM+ R ILPD     SL+     +G    AI
Sbjct: 609 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI 668

Query: 241 ELQNEMMGRG 250
               E   RG
Sbjct: 669 LFAKEAEARG 678



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 1/235 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  LC   K  +++  +  M  +G+  NTV    L++ Y  +GE  +A S+ DEM 
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 T  T+  L+ GLCK G +REA  +   +       +  +Y  L+  +CK   + 
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYL-KHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +A +LF EM +R ++PD+  YT+LI G   K ++    L  K       V  +   YT  
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           V G+ + G  +       +M   G  PD +   +++  +   G +++  +L  EM
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 98/229 (42%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E   +DS  +   M   G   +   C  ++ +  K+GE     S L EML  +I   V T
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 195

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           F +LI+ LC  G   ++     +M   G  P +  Y  ++   CKK   + A  L D M 
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 255

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
            + +  D   Y  LI    +     +   L   M +  +  +   Y +L+ G S  G + 
Sbjct: 256 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            A  L +EM+  G+ P+ +   +L+  H   GN  EA+++   M  +GL
Sbjct: 316 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 107/238 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G   E  F+++  +   M+  GLT + V    L+D   K  E   A      M 
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + + V  +T+  +IDGLCK+G + EA+     M   G+ P++  Y+ALI+G CK    +
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +   + +  + P+   Y+ LI    +    KEA+ +   M   G   D   +  LV
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             L + G + EA      M   GILP+ +    L+  +   G   +A  + +EM   G
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 111/275 (40%), Gaps = 36/275 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG+++ GLC      +++  L  +       +TV+  TL+ A  K+G  ++A+SL  EM+
Sbjct: 581 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 640

Query: 73  DSRIEVTVVTFCVLIDGLCKSG-------LVREA-------------------------- 99
              I     T+  LI GLC+ G         +EA                          
Sbjct: 641 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 700

Query: 100 ---IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
              I +  +M + G  P++    A+IDG  +   IE+  +L  EM  ++  P+ T Y  L
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           + GY K +    +  L   +   G+  D     SLV G+     L+    +    I RG+
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             D      L+ K    G ++ A +L   M   G+
Sbjct: 821 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 111/251 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N   +L  Y  ++ G         S LL   +  NG+  + + C +L+    ++  
Sbjct: 745 MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L +L   +   +EV   TF +LI   C +G +  A D    M   G+  +     A
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  L + +  + +R +  EM K+ + P++  Y  LI+G  +    K A  +K  M    
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +     A +++V  L++CG   EA +L   M+   ++P      +L+    + GN+ EA+
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984

Query: 241 ELQNEMMGRGL 251
           EL+  M   GL
Sbjct: 985 ELRVVMSNCGL 995



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 36/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M  ++I  D   Y ++I GLC + K   + L   E +  G +  N V+ T  +D  FKAG
Sbjct: 639 MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +    +   ++M +      +VT   +IDG  + G + +  D    M +    PN+  Y 
Sbjct: 699 QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 758

Query: 120 -----------------------------------ALIDGLCKKNCIERARNLFDEMPKR 144
                                              +L+ G+C+ N +E    +      R
Sbjct: 759 ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            +  D   +  LI     +     A +L   MT +G+ LD +   ++V  L+R    QE+
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           R++ HEM  +GI P+    I L+      G++  A  ++ EM+  
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 80/165 (48%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  + I  +   Y  +I GLC     + + ++  EM  + +    V  + ++ A  K G+
Sbjct: 885  MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 944

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA  LL  ML  ++  T+ +F  L+   CK+G V EA++    M + GL  ++  Y  
Sbjct: 945  ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            LI GLC K  +  A  L++EM     + + T Y ALI G L  E+
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARET 1049



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 1/251 (0%)

Query: 4    KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            + ++ D   +  +I   C   +   +  L+  M   G++ +   C  ++    +     E
Sbjct: 818  RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 877

Query: 64   ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            +  +L EM    I      +  LI+GLC+ G ++ A      M    + P     +A++ 
Sbjct: 878  SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937

Query: 124  GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             L K    + A  L   M K  ++P   ++T L+    K+ +  EAL L+  M+  G+ L
Sbjct: 938  ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 997

Query: 184  DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE-L 242
            DL +Y  L+ GL   G +  A  L+ EM G G L +     +L++    R       + +
Sbjct: 998  DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1057

Query: 243  QNEMMGRGLLS 253
              +++ RG ++
Sbjct: 1058 LKDLLARGFIT 1068



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 98/239 (41%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+     +I G     K E +  LL EM       N      L+  Y K  + S +  L 
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             ++ + I    +T   L+ G+C+S ++   +         G+  +   +  LI   C  
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I  A +L   M    +  D     A++    ++  F+E+  + + M++ G+  +   Y
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L+ GL R G ++ A V+  EMI   I P  +   ++++   + G  DEA  L   M+
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 124/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K + AD+  Y  +I  LC  ++     LLL +M++  +  N V   TL++ +   G+
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL+EML   +    VTF  LIDG    G  +EA+  F  M   GL P+   Y  
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK    + AR  +  M +  +      YT +IDG  K+    EA+ L N M++ G
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D D+  Y++L+ G  + G  + A+ +   +   G+ P+ I+  +L+      G + EAI
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533

Query: 241 ELQNEMMGRG 250
            +   M+  G
Sbjct: 534 RIYEAMILEG 543



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 124/255 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  +   Y T+I G   E K   +  LL+EM   GL+ N V    L+D +   G 
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL +   M    +  + V++ VL+DGLCK+     A  ++ RM   G+      YT 
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   ++ A  L +EM K  + PD   Y+ALI+G+ K   FK A  +  R+  VG
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y++L++   R G L+EA  ++  MI  G   D      L+    + G + EA 
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568

Query: 241 ELQNEMMGRGLLSGS 255
           E    M   G+L  +
Sbjct: 569 EFMRCMTSDGILPNT 583



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +      YG ++ GLC  ++F+ ++     MK NG+    +  T ++D   K G 
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 458

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL+EM    I+  +VT+  LI+G CK G  + A +   R+   GL PN  +Y+ 
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518

Query: 121 LIDGLCKKNCIERARNLFDEM----PKRD------------------------------- 145
           LI   C+  C++ A  +++ M      RD                               
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+T ++  LI+GY       +A ++ + MT+VG       Y SL+ GL + GHL+EA 
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
                +       D ++  +LL    + GN+ +A+ L  EM+ R +L  S
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  +  +I  LC E  FE S  L+ +M+++G     V   T++  Y K G 
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ LLD M    ++  V T+ +LI  LC+S  + +       M    +HPN   Y  
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G   +  +  A  L +EM    + P+   + ALIDG++   +FKEAL +   M   G
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +     +Y  L+ GL +      AR  +  M   G+    I    ++    + G +DEA+
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463

Query: 241 ELQNEMMGRGL 251
            L NEM   G+
Sbjct: 464 VLLNEMSKDGI 474



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 1/235 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  LC   K  +++  +  M  +G+  NTV    L++ Y  +GE  +A S+ DEM 
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 T  T+  L+ GLCK G +REA  +   +       +  +Y  L+  +CK   + 
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYL-KHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +A +LF EM +R ++PD+  YT+LI G   K ++    L  K       V  +   YT  
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           V G+ + G  +       +M   G  PD +   +++  +   G +++  +L  EM
Sbjct: 731 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 98/229 (42%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E   +DS  +   M   G   +   C  ++ +  K+GE     S L EML  +I   V T
Sbjct: 176 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 235

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           F +LI+ LC  G   ++     +M   G  P +  Y  ++   CKK   + A  L D M 
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 295

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
            + +  D   Y  LI    +     +   L   M +  +  +   Y +L+ G S  G + 
Sbjct: 296 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 355

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            A  L +EM+  G+ P+ +   +L+  H   GN  EA+++   M  +GL
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 107/238 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G   E  F+++  +   M+  GLT + V    L+D   K  E   A      M 
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + + V  +T+  +IDGLCK+G + EA+     M   G+ P++  Y+ALI+G CK    +
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +   + +  + P+   Y+ LI    +    KEA+ +   M   G   D   +  LV
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 555

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             L + G + EA      M   GILP+ +    L+  +   G   +A  + +EM   G
Sbjct: 556 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613



 Score = 78.6 bits (192), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 111/275 (40%), Gaps = 36/275 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG+++ GLC      +++  L  +       +TV+  TL+ A  K+G  ++A+SL  EM+
Sbjct: 621 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 680

Query: 73  DSRIEVTVVTFCVLIDGLCKSG-------LVREA-------------------------- 99
              I     T+  LI GLC+ G         +EA                          
Sbjct: 681 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 740

Query: 100 ---IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
              I +  +M + G  P++    A+IDG  +   IE+  +L  EM  ++  P+ T Y  L
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           + GY K +    +  L   +   G+  D     SLV G+     L+    +    I RG+
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 860

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             D      L+ K    G ++ A +L   M   G+
Sbjct: 861 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 111/251 (44%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  +N   +L  Y  ++ G         S LL   +  NG+  + + C +L+    ++  
Sbjct: 785  MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 844

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                L +L   +   +EV   TF +LI   C +G +  A D    M   G+  +     A
Sbjct: 845  LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 904

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            ++  L + +  + +R +  EM K+ + P++  Y  LI+G  +    K A  +K  M    
Sbjct: 905  MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 964

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +     A +++V  L++CG   EA +L   M+   ++P      +L+    + GN+ EA+
Sbjct: 965  ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 1024

Query: 241  ELQNEMMGRGL 251
            EL+  M   GL
Sbjct: 1025 ELRVVMSNCGL 1035



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 36/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M  ++I  D   Y ++I GLC + K   + L   E +  G +  N V+ T  +D  FKAG
Sbjct: 679 MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 738

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +    +   ++M +      +VT   +IDG  + G + +  D    M +    PN+  Y 
Sbjct: 739 QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 798

Query: 120 -----------------------------------ALIDGLCKKNCIERARNLFDEMPKR 144
                                              +L+ G+C+ N +E    +      R
Sbjct: 799 ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 858

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            +  D   +  LI     +     A +L   MT +G+ LD +   ++V  L+R    QE+
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           R++ HEM  +GI P+    I L+      G++  A  ++ EM+  
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 963



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 80/165 (48%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  + I  +   Y  +I GLC     + + ++  EM  + +    V  + ++ A  K G+
Sbjct: 925  MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 984

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA  LL  ML  ++  T+ +F  L+   CK+G V EA++    M + GL  ++  Y  
Sbjct: 985  ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1044

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            LI GLC K  +  A  L++EM     + + T Y ALI G L  E+
Sbjct: 1045 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARET 1089



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 1/251 (0%)

Query: 4    KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            + ++ D   +  +I   C   +   +  L+  M   G++ +   C  ++    +     E
Sbjct: 858  RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 917

Query: 64   ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            +  +L EM    I      +  LI+GLC+ G ++ A      M    + P     +A++ 
Sbjct: 918  SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 977

Query: 124  GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             L K    + A  L   M K  ++P   ++T L+    K+ +  EAL L+  M+  G+ L
Sbjct: 978  ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 1037

Query: 184  DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE-L 242
            DL +Y  L+ GL   G +  A  L+ EM G G L +     +L++    R       + +
Sbjct: 1038 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1097

Query: 243  QNEMMGRGLLS 253
              +++ RG ++
Sbjct: 1098 LKDLLARGFIT 1108



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 98/239 (41%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+     +I G     K E +  LL EM       N      L+  Y K  + S +  L 
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             ++ + I    +T   L+ G+C+S ++   +         G+  +   +  LI   C  
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I  A +L   M    +  D     A++    ++  F+E+  + + M++ G+  +   Y
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L+ GL R G ++ A V+  EMI   I P  +   ++++   + G  DEA  L   M+
Sbjct: 938 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 996


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 115/217 (52%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+ + G   N  +   LM+ + K G  S+A  + DE+    ++ TVV+F  LI+G CK G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + E      +M      P+V  Y+ALI+ LCK+N ++ A  LFDEM KR +IP+   +T
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LI G+ ++           +M   G+  D+  Y +LV G  + G L  AR +   MI R
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G+ PD+I   +L+      G+++ A+E++ EM   G+
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 35/274 (12%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++  ++   C E    D++ +  E+ +  L    V   TL++ Y K G   E   L  +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301

Query: 72  LDSRIEVTVVTFCVLIDGLCKS----------------GLVREAIDY------------- 102
             SR    V T+  LI+ LCK                 GL+   + +             
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361

Query: 103 ------FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
                 + +M   GL P++ +Y  L++G CK   +  ARN+ D M +R + PD   YT L
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           IDG+ +    + AL ++  M + G++LD   +++LV G+ + G + +A     EM+  GI
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            PD++    ++    ++G+     +L  EM   G
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 35/270 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    + D+  Y  +I  LC E+K + +  L  EM + GL  N VI TTL+  + + GE
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                    +ML   ++  +V +  L++G CK+G +  A +    M   GL P+   YT 
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420

Query: 121 LIDGLCKKNCIERARNLFDEMPK------------------------------RDMI--- 147
           LIDG C+   +E A  +  EM +                              R+M+   
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480

Query: 148 --PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             PD   YT ++D + K    +    L   M   G    +  Y  L+ GL + G ++ A 
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGN 235
           +L   M+  G++PD+I   +LL+ H+   N
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 4/211 (1%)

Query: 45  TVICTTLMDA----YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           T +C  L+DA    Y   G   +A+         R +V +     L+D + K        
Sbjct: 166 TPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIW 225

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
            ++  + D G   NV V+  L++  CK+  I  A+ +FDE+ KR + P   ++  LI+GY
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGY 285

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K  +  E   LK++M +     D+  Y++L+  L +   +  A  LF EM  RG++P++
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           ++  +L+  H   G +D   E   +M+ +GL
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGL 376



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 95/204 (46%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  L+D   K            E+LD+   + V  F +L++  CK G + +A   F  + 
Sbjct: 208 CGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEIT 267

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
              L P V  +  LI+G CK   ++    L  +M K    PD   Y+ALI+   K     
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            A  L + M + G+  +   +T+L+ G SR G +   +  + +M+ +G+ PD +L  +L+
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
               + G++  A  + + M+ RGL
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRGL 411



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 3/205 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D   Y T+I G C     E +  +  EM +NG+  + V  + L+    K G 
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A   L EML + I+   VT+ +++D  CK G  +        M   G  P+V  Y  
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GLCK   ++ A  L D M    ++PD   Y  L++G+ +H +  +    K    E+G
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQK---PEIG 582

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEAR 205
           +  DL +Y S+V  L R       R
Sbjct: 583 IVADLASYKSIVNELDRASKDHRNR 607


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 119/239 (49%), Gaps = 1/239 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y T+I   C +     +      ++E+G+  +T  C  L+  Y +  +  +A  LL
Sbjct: 178 DTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLL 237

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M          ++ +LI GLC++  VREA+     M   G   N+  YT LI GLCK+
Sbjct: 238 MMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKE 297

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I  AR L DEMP R ++P    Y A+IDGY K    K+AL +K  M + G + D   Y
Sbjct: 298 GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTY 357

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            SL++GL   G L EA  L +  I RG  P  I   +L+  + +   +D+A+ +++ M+
Sbjct: 358 NSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 3/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N K DL  YG +I  L  + + +++K  L+EM  NGL  N V  T+++D Y K G 
Sbjct: 414 MISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGM 473

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +   M          T+  LI GL +   + +A+    +M + G+ P V  YT 
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTT 533

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CKK+  + A  LF+ M +  + PD  AY  L D   K    +EA +    +   G
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKG 590

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V L    YTSLV G S+ G+   A VL  +M+  G   D      LL+   ++  ++EA+
Sbjct: 591 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEAL 650

Query: 241 ELQNEMMGRGL 251
            + ++M   G+
Sbjct: 651 SILDQMTVSGV 661



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 1/208 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I+GLC   K ++++ LL+     G T   +  T L++ Y KA    +AL +   M+
Sbjct: 357 YNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S  ++ +  + VLI+ L K   ++EA +    M   GL PNV  YT++IDG CK   + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVG 475

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F  M      P+   Y +LI G ++ +   +A+ L  +M E G+   +  YT+L+
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLI 535

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDE 220
            G  +      A  LF  M   G+ PDE
Sbjct: 536 QGQCKKHEFDNAFRLFEMMEQNGLTPDE 563



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 123/299 (41%), Gaps = 48/299 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTAN---------------- 44
           M+   I   +  Y T+I G C + +F+++  L   M++NGLT +                
Sbjct: 519 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGR 578

Query: 45  ----------------TVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
                            V  T+L+D + KAG    A  L+++M++   +  + T+ VL+ 
Sbjct: 579 AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQ 638

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            LCK   + EA+    +M   G+  N+  YT +I  + K+   + A++LF+EM      P
Sbjct: 639 ALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
             T YT  I  Y K    +EA +L   M   GV  D+  Y   + G    G++  A    
Sbjct: 699 SATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTL 758

Query: 209 HEMIGRGILPD---------EILCISLLKKHY-ERGNMDEAIELQ------NEMMGRGL 251
             M+     P+           L +SL+  HY +   M   IEL         MM  GL
Sbjct: 759 KRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGL 817



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 34/277 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL- 67
           +L  Y  +I GLC E +  D++ LL EM   G+  +      ++D Y K+G   +AL + 
Sbjct: 283 NLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 342

Query: 68  -----------------------------LDEMLDSRIE----VTVVTFCVLIDGLCKSG 94
                                         +E+L+  I      TV+TF  LI+G CK+ 
Sbjct: 343 ALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAE 402

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + +A+     M       ++  Y  LI+ L KK  ++ A+   +EM    + P+   YT
Sbjct: 403 RIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYT 462

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           ++IDGY K      AL +   M   G   +   Y SL++GL +   L +A  L  +M   
Sbjct: 463 SIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED 522

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           GI P  I   +L++   ++   D A  L   M   GL
Sbjct: 523 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 559



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 117/284 (41%), Gaps = 34/284 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++   ++ D      ++ G C  S    +  LL  M   G   N    T L+    +A  
Sbjct: 205 LRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARC 264

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L+  M+     + + T+ +LI GLCK G + +A      MP  G+ P+V  Y A
Sbjct: 265 VREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNA 324

Query: 121 LIDGLCKK----------------NC------------------IERARNLFDEMPKRDM 146
           +IDG CK                  C                  ++ A  L +    R  
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGF 384

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P    +T LI+GY K E   +AL +K+ M      LDL AY  L+  L +   L+EA+ 
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE 444

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +EM   G+ P+ +   S++  + + G +  A+E+   M   G
Sbjct: 445 TLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEG 488



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 16/223 (7%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K     Y   I   C   + E+++ L+ EM+ +G+T + V     ++     G    A S
Sbjct: 697 KPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFS 756

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR-EAIDYFG---------------RMPDFG 110
            L  M+D+  E    T+ +L+    K  L+    +D  G               RM   G
Sbjct: 757 TLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHG 816

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           L+P V  Y+++I G CK   +E A  L D M  +D+ P+   YT LI      + F +A+
Sbjct: 817 LNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAV 876

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           +    M E G    L +Y  L+ GL   G    A+ LF +++G
Sbjct: 877 SFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLG 919



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 19/249 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  KADL  Y  ++  LC + K  ++  +L +M  +G+  N V  T ++    K G+
Sbjct: 621 MVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGK 680

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SL +EM+ S  + +  T+ V I   CK G + EA    G M   G+ P+V  Y  
Sbjct: 681 HDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNI 740

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+G      I+RA +    M      P+   Y  L+  +LK       ++L        
Sbjct: 741 FINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK-------MSL-------- 785

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +NA+     G+     L     L   M+  G+ P  +   S++    +   ++EA 
Sbjct: 786 ----INAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEAC 841

Query: 241 ELQNEMMGR 249
            L + M+G+
Sbjct: 842 VLLDHMLGK 850



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 83/171 (48%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
            VT+  +I   CK G +  A  YF  + + G+  +     AL+ G C+ + + +A  L  
Sbjct: 179 TVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLM 238

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
            MP      +  +YT LI G  +    +EAL L   M   G  L+L+ YT L+ GL + G
Sbjct: 239 MMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEG 298

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            + +AR L  EM  RG++P      +++  + + G M +A+ ++  M   G
Sbjct: 299 RIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 72/161 (44%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           LL  M ++GL    V  ++++  + KA    EA  LLD ML   I      + +LI   C
Sbjct: 808 LLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCC 867

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
              L  +A+ +   M +FG  P +  Y  LI GLC +   +RA++LF ++   D   +  
Sbjct: 868 DIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEV 927

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           A+  L DG LK         L   M      +D  +Y+ L 
Sbjct: 928 AWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLT 968



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 64/146 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G C  ++ E++ +LL  M    ++ N  I T L+          +A+S + +M+
Sbjct: 824 YSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMI 883

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +  + ++  LI GLC  G    A   F  +     + N   +  L DGL K   ++
Sbjct: 884 EFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVD 943

Query: 133 RARNLFDEMPKRDMIPDTTAYTALID 158
               L   M  R    D+ +Y+ L D
Sbjct: 944 FCSQLLAAMDNRHCRIDSESYSMLTD 969


>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 418

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 117/221 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L  ++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 102/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 125/273 (45%), Gaps = 31/273 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  YGTI+ G+C     + +  LLS+M+E  +  + VI + ++D   K G 
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  L  EML+  I   V T+  +IDG C  G   +A      M +  ++P+V  + A
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA----------- 169
           LI    K+  +  A  L DEM  R + PDT  Y ++I G+ KH  F +A           
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD 431

Query: 170 --------------------LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
                               + L   ++  G+  +   Y +L+ G     +L  A+ LF 
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           EMI  G+ PD I C  LL    E   ++EA+EL
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALEL 524



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 15/249 (6%)

Query: 6   IKADLPLYGTIIWGLCIESK---------------FEDSKLLLSEMKENGLTANTVICTT 50
            + D+  + T++ GLC+E +               F ++  L  +M E GLT   +   T
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L++     G   EA +L+++M+   + + VVT+  +++G+CK G  + A++   +M +  
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+V +Y+A+ID LCK      A+ LF EM ++ + P+   Y  +IDG+     + +A 
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   M E  ++ D+  + +L+    + G L EA  L  EM+ R I PD +   S++   
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411

Query: 231 YERGNMDEA 239
            +    D+A
Sbjct: 412 CKHNRFDDA 420



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 8/253 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y ++I+G C  ++F+D+K +   M     + + V   T++D Y +A  
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 447

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + LL E+    +     T+  LI G C+   +  A D F  M   G+ P+      
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507

Query: 121 LIDGLCKKNCIERARNLFD--EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           L+ G C+   +E A  LF+  +M K D+  DT AY  +I G  K     EA +L   +  
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            GV+ D+  Y  ++ G      + +A VLFH+M   G  PD     +L++   + G +D+
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625

Query: 239 AIELQNEMMGRGL 251
           +IEL +EM   G 
Sbjct: 626 SIELISEMRSNGF 638



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 15/267 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  ++  +  +I   C   K   S     ++ + G   + V   TL+        
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191

Query: 61  PSEALSL---------------LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
            SEAL+L                D+M++  +   V+TF  LI+GLC  G V EA     +
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M   GLH +V  Y  +++G+CK    + A NL  +M +  + PD   Y+A+ID   K   
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
             +A  L + M E G+  ++  Y  ++ G    G   +A+ L  +MI R I PD +   +
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLL 252
           L+    + G + EA +L +EM+ R + 
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIF 398



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 89/181 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + + A+   Y T+I G C       ++ L  EM  +G+  +T+ C  L+  + +  +  E
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L + +  S+I++  V + ++I G+CK   V EA D F  +P  G+ P+V  Y  +I 
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C K+ I  A  LF +M      PD + Y  LI G LK     +++ L + M   G   
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640

Query: 184 D 184
           D
Sbjct: 641 D 641



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 8/223 (3%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + TII   C   + ++   LL E+   GL ANT    TL+  + +    + A  L 
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   +    +T  +L+ G C++  + EA++ F  +    +  +   Y  +I G+CK 
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A +LF  +P   + PD   Y  +I G+    +  +A  L ++M + G + D + Y
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGI--------LPDEILC 223
            +L+ G  + G + ++  L  EM   G         + +EI+C
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 15/222 (6%)

Query: 45  TVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG 104
            V C  ++  + +   P  A+SL  +M   RI + + +F +LI   C    +  ++  FG
Sbjct: 106 AVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIE---------------RARNLFDEMPKRDMIPD 149
           ++   G  P+V  +  L+ GLC ++ I                 A  LFD+M +  + P 
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPV 225

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              +  LI+G        EA  L N+M   G+ +D+  Y ++V G+ + G  + A  L  
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +M    I PD ++  +++ +  + G+  +A  L +EM+ +G+
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 15/233 (6%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M+   +  N      L+  +    + S +LS   ++     +  VVTF  L+ GLC
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLC 187

Query: 92  KSGLVREAIDYFG---------------RMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
               + EA+  FG               +M + GL P V  +  LI+GLC +  +  A  
Sbjct: 188 LEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 247

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           L ++M  + +  D   Y  +++G  K    K ALNL ++M E  +  D+  Y++++  L 
Sbjct: 248 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 307

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           + GH  +A+ LF EM+ +GI P+      ++      G   +A  L  +M+ R
Sbjct: 308 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360



 Score = 54.3 bits (129), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 17/207 (8%)

Query: 55  YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
           YFK+ +  +A+   D M+ SR   T V    +I    +      AI  + +M    +  N
Sbjct: 83  YFKSLD--DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLN 140

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID---------------G 159
           +  +  LI   C  + +  + + F ++ K    PD   +  L+                G
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           Y+    F EA+ L ++M E+G+   +  + +L+ GL   G + EA  L ++M+G+G+  D
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260

Query: 220 EILCISLLKKHYERGNMDEAIELQNEM 246
            +   +++    + G+   A+ L ++M
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKM 287


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 129/287 (44%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ K +K D+  Y T++ G C   +F+D   L++EM E G        + L+D   K G 
Sbjct: 279 LREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGN 338

Query: 61  PSEALSLL-----------------------------------DEMLDSRIEVTVVTFCV 85
              A  L+                                     M    + +  VT+ +
Sbjct: 339 IDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSI 398

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LID  CK G++  A  YFGRM + G+   +  Y +LI+G CK   +  A  L+ +M    
Sbjct: 399 LIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEG 458

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P  T +T LI GY K    ++A  L   M E  +   +  +T+L++GL     + EA 
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            LF EM+ R I P E+    +++ + +  NMD+A EL  +M+  GL+
Sbjct: 519 KLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLV 565



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 1/248 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KN+K +   Y  ++ G C + +  ++     EM + G+  + V    L+D   K  +   
Sbjct: 597 KNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKR 656

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              LL +M D  +    V +  +ID   K G  +++ +    M      PNV  YTA ++
Sbjct: 657 LFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMN 716

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   I+RA +LF++M   ++ P++  Y   +D   K  + KEA +L + M + G+  
Sbjct: 717 GLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLA 775

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y  L+ G  + G L EA  +  EM   GI PD I   +++ +H   G++  A+EL 
Sbjct: 776 NTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELW 835

Query: 244 NEMMGRGL 251
           + M+ +G+
Sbjct: 836 DTMLRKGV 843



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 5/253 (1%)

Query: 4   KNIKA-DLPL----YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
           KN+ + +LPL    Y  +I   C     + ++     M E+G+        +L++ + K 
Sbjct: 382 KNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKF 441

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ S A  L  +M++  +E T  TF  LI G CK   V +A   +  M +  + P+V  +
Sbjct: 442 GDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTF 501

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           TALI GLC  N +  A  LFDEM +R + P    Y  +I+GY K  +  +A  L   M  
Sbjct: 502 TALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLH 561

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G+  D   Y  L+ GL   G +  A+    ++  + +  +E+   +LL  +  +G + E
Sbjct: 562 NGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTE 621

Query: 239 AIELQNEMMGRGL 251
           A+    EM+ RG+
Sbjct: 622 ALSASCEMIQRGI 634



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 117/229 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C + + E +  L  EM E  +  +    T L+       E +EA  L DEM+
Sbjct: 466 FTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMV 525

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + +I+ T VT+ V+I+G CK+  + +A +    M   GL P+   Y  LI GLC    + 
Sbjct: 526 ERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVS 585

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A++  D++ K+++  +   Y+AL+ GY       EAL+    M + G+++DL  +  L+
Sbjct: 586 AAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLI 645

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            G  +   ++    L  +M  +G+ PD ++  S++  + + G+  ++ E
Sbjct: 646 DGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGE 694



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 36/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I   +  +  +I+GLC  ++  ++  L  EM E  +    V    +++ Y KA  
Sbjct: 489 MNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHN 548

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF----------------- 103
             +A  LL++ML + +     T+  LI GLC +G V  A D+                  
Sbjct: 549 MDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSA 608

Query: 104 --------GRMPDF----------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                   GR+ +           G++ ++  +  LIDG  K+  ++R   L  +M  + 
Sbjct: 609 LLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQG 668

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD+  YT++ID Y K  SFK++    + M       ++  YT+ + GL + G +  A 
Sbjct: 669 LRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAG 728

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            LF +M+   I P+ +     L    + GNM EA +L +EM+ +GLL+ +
Sbjct: 729 HLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANT 777



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 116/246 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+       +  Y  +I GLC      ++  +   ++E GL  + V   TL+  + +  +
Sbjct: 244 MESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQ 303

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + L++EM++     T      L+DGL K G +  A D   ++  FG  PN+ VY A
Sbjct: 304 FDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNA 363

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+ LCK   +++A  L+  M   ++  +   Y+ LID + K      A +   RM E G
Sbjct: 364 LINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDG 423

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y SL+ G  + G L  A  L+ +MI  G+ P      +L+  + +   +++A 
Sbjct: 424 IRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAF 483

Query: 241 ELQNEM 246
           +L  EM
Sbjct: 484 KLYREM 489



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 116/260 (44%), Gaps = 10/260 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D  +Y ++I     E  F+ S   L  M       N V  T  M+   K GE
Sbjct: 664 MYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGE 723

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L ++ML + I    VT+   +D L K G ++EA D    M   GL  N A Y  
Sbjct: 724 IDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNI 782

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +  A  +  EM +  + PD   Y+ +I  + +      A+ L + M   G
Sbjct: 783 LIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKG 842

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL---------CISLLKKHY 231
           V+ D  A+  L++G    G L +A  L ++M+ RG+ P +IL         C  L+    
Sbjct: 843 VEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGC 902

Query: 232 ERGNMDEAIELQNEMMGRGL 251
             G +D A+ L + M+ R +
Sbjct: 903 VTGEVDTALRLYHSMLTRAV 922



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 112/246 (45%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+  +  Y ++I G C       ++ L ++M   GL       TTL+  Y K  +  +A 
Sbjct: 424 IRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAF 483

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM +  I  +V TF  LI GLC +  + EA   F  M +  + P    Y  +I+G 
Sbjct: 484 KLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGY 543

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK + +++A  L ++M    ++PDT  Y  LI G         A +  + + +  + L+ 
Sbjct: 544 CKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNE 603

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y++L+ G    G L EA     EMI RGI  D +    L+    ++ +M     L  +
Sbjct: 604 MCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKK 663

Query: 246 MMGRGL 251
           M  +GL
Sbjct: 664 MYDQGL 669



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 112/243 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L +Y  +I  LC     + ++LL   M    L  N V  + L+D++ K G    A S  
Sbjct: 357 NLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYF 416

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M++  I  T+  +  LI+G CK G +  A   + +M + GL P    +T LI G CK 
Sbjct: 417 GRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKD 476

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E+A  L+ EM ++++ P    +TALI G        EA  L + M E  +      Y
Sbjct: 477 LQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTY 536

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             ++ G  +  ++ +A  L  +M+  G++PD      L+      G +  A +  +++  
Sbjct: 537 NVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHK 596

Query: 249 RGL 251
           + L
Sbjct: 597 KNL 599



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 113/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  +  ++     I+ GL    KF     +  E    G+  +   C+ ++ +  +  +
Sbjct: 174 MLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKD 233

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A   +  M  +R ++++VT+ VLI GLCK G V EA++    + + GL  +V  Y  
Sbjct: 234 FCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCT 293

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+    +    L +EM +   +P   A + L+DG  K  +   A +L  ++   G
Sbjct: 294 LVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFG 353

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y +L+  L +   L +A +L+  M    +  +++    L+    +RG +D A 
Sbjct: 354 FLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAE 413

Query: 241 ELQNEMMGRGL 251
                M+  G+
Sbjct: 414 SYFGRMIEDGI 424



 Score = 40.0 bits (92), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 72/174 (41%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           + + F  L+    ++  V +A+     M    L P V   +A+++GL +         +F
Sbjct: 147 STLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVF 206

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
           DE     + PD    +A+I    + + F  A      M     DL +  Y  L+ GL + 
Sbjct: 207 DESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKG 266

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G + EA  +   +  +G+  D +   +L+         D+ I L NEM+  G +
Sbjct: 267 GGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFV 320


>gi|260766045|gb|ACX50053.1| AT1G03560-like protein [Capsella bursa-pastoris]
          Length = 187

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/187 (38%), Positives = 99/187 (52%), Gaps = 1/187 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+    ++  +I GLC E K  +   +   M   G   N  I T L+D Y K+G   +A+
Sbjct: 1   IQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI 60

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL  M+D   +  VVT+ V+++GLCK+G V EA+DYF      GL  N   Y++LIDGL
Sbjct: 61  RLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGL 120

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLD 184
            K   I+ A  LF+EM ++    D+  Y ALID   KH    EA+ L  RM  E G D  
Sbjct: 121 GKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQT 180

Query: 185 LNAYTSL 191
           +  YT L
Sbjct: 181 VYTYTIL 187



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/171 (33%), Positives = 84/171 (49%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I+V    F ++I GLCK G + E    F  M   G  PNVA+YT LIDG  K   +E A 
Sbjct: 1   IQVPPHVFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI 60

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L   M      PD   Y+ +++G  K+   +EAL+        G+ ++   Y+SL+ GL
Sbjct: 61  RLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGL 120

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + G + EA  LF EM  +G   D     +L+    + G +DEA+ L   M
Sbjct: 121 GKAGRIDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 171



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 79/155 (50%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           K G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V 
Sbjct: 17  KEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV 76

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y+ +++GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M
Sbjct: 77  TYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEM 136

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +E G   D   Y +L+  L++ G + EA  LF  M
Sbjct: 137 SEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRM 171



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 71/134 (52%)

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           V++ +I GLCK+  +     +F+ M ++   P+   YT LIDGY K  S ++A+ L +RM
Sbjct: 7   VFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 66

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            + G   D+  Y+ +V GL + G ++EA   F      G+  + +   SL+    + G +
Sbjct: 67  IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRI 126

Query: 237 DEAIELQNEMMGRG 250
           DEA  L  EM  +G
Sbjct: 127 DEAERLFEEMSEKG 140



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 1/122 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NGL  N++  ++L+D   KAG 
Sbjct: 66  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGR 125

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 126 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYT 185

Query: 120 AL 121
            L
Sbjct: 186 IL 187


>gi|224576657|gb|ACN57002.1| At1g03560-like protein [Capsella grandiflora]
          Length = 207

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      GL  N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    + 
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEX 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRN- 179

Query: 234 GNMDEAIELQNEMMGRGL 251
              + A++L + M+ +G+
Sbjct: 180 ---EXALKLWDMMIDKGI 194



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 1/160 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + NGL  N++  ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCRFNGLAINSMFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
            LI G+ K +  E A  L+D M  + + P    + AL  G
Sbjct: 168 ILISGMFKDHRNEXALKLWDMMIDKGITPTAACFRALSTG 207



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 1/192 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        + + +  + +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCRFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            L K   ++ A  LF  M + +    T   YT LI G  K    + AL L + M + G+ 
Sbjct: 136 ALTKHGKVDEAMTLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEXALKLWDMMIDKGIT 195

Query: 183 LDLNAYTSLVWG 194
                + +L  G
Sbjct: 196 PTAACFRALSTG 207


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 125/243 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I GL + +K  ++  L+  M   G   + V    +++   K G+   A +LL++M 
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             ++E  V+ +  +IDGLCK   + +A++ F  M   G+ PNV  Y++LI  LC      
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  +M +R + PD   ++ALID ++K     EA  L + M +  +D  +  Y+SL+
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G      L EA+ +F  M+ +   PD +   +L+K   +   ++E +E+  EM  RGL+
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428

Query: 253 SGS 255
             +
Sbjct: 429 GNT 431



 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 124/240 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++  + +Y TII GLC     +D+  L  EM+  G+  N V  ++L+      G 
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL +M++ +I   V TF  LID   K G + EA   +  M    + P++  Y++
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C  + ++ A+ +F+ M  +   PD   Y  LI G+ K++  +E + +   M++ G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y  L+ GL + G    A+ +F EM+  G+ P+ +   +LL    + G +++A+
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + DL  YG ++ GLC     + +  LL++M++  L    +I  T++D   K   
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  EM    I   VVT+  LI  LC  G   +A      M +  ++P+V  ++A
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+  +  A  L+DEM KR + P    Y++LI+G+  H+   EA  +   M    
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +L+ G  +   ++E   +F EM  RG++ + +    L++  ++ G+ D A 
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451

Query: 241 ELQNEMMGRGL 251
           E+  EM+  G+
Sbjct: 452 EIFKEMVSDGV 462



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 120/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C  S+   +  +L +M + G   N V  ++L++ Y  +   SEA++L+D+M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +  +   VTF  LI GL       EA+    RM   G  P++  Y  +++GLCK+   +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NL ++M +  + P    Y  +IDG  K++   +ALNL   M   G+  ++  Y+SL+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L   G   +A  L  +MI R I PD     +L+    + G + EA +L +EM+ R +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 106/208 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ ++  Y ++I  LC   ++ D+  LLS+M E  +  +    + L+DA+ K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEM+   I+ ++VT+  LI+G C    + EA   F  M      P+V  Y  
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E    +F EM +R ++ +T  Y  LI G  +      A  +   M   G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  ++  Y +L+ GL + G L++A V+F
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVF 489



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I   +  Y ++I G C+  + +++K +   M       + V   TL+  + K   
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + +  EM    +    VT+ +LI GL ++G    A + F  M   G+ PN+  Y  
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +E+A  +F+ + +  M P    Y  +I+G  K    ++  +L   ++  G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+ AY +++ G  R G  +EA  LF EM   G LP+     +L++     G+ + + 
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591

Query: 241 ELQNEMMGRGL 251
           EL  EM   G 
Sbjct: 592 ELIKEMRSCGF 602



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 1/240 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   D+  Y T+I G C   + E+   +  EM + GL  NTV    L+   F+AG+
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  EM+   +   ++T+  L+DGLCK+G + +A+  F  +    + P +  Y  
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   +E   +LF  +  + + PD  AY  +I G+ +  S +EA  L   M E G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y +L+    R G  + +  L  EM   G   D    I L+      G +D++ 
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS-TIGLVTNMLHDGRLDKSF 625



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 112/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  +   +KF+    L  +M+  G+  N    + L++ + +  +   AL++L +M+
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E  +VT   L++G C S  + EA+    +M   G  PN   +  LI GL   N   
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L D M  +   PD   Y  +++G  K      A NL N+M +  ++  +  Y +++
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +  H+ +A  LF EM  +GI P+ +   SL+      G   +A  L ++M+ R +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 107/229 (46%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E K +D+  L  EM ++    + +  + L+ A  K  +    +SL ++M +  I     T
Sbjct: 59  ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           + +LI+  C+   +  A+   G+M   G  PN+   ++L++G C    I  A  L D+M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
                P+T  +  LI G   H    EA+ L +RM   G   DL  Y  +V GL + G   
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            A  L ++M    + P  ++  +++    +  +MD+A+ L  EM  +G+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287


>gi|224576649|gb|ACN56998.1| At1g03560-like protein [Capsella grandiflora]
          Length = 196

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  +   +   M   G   N  I T L+D Y K+G   +A+ LL  M+D   +  VVT+ 
Sbjct: 2   KLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYS 61

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+++GLCK+G V EA+DYF      GL  N   Y++LIDGL K   I+ A  LF+EM ++
Sbjct: 62  VVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEK 121

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               D+  Y ALID   KH    EA+ L  RM  E G D  +  YT L+ G+ +    + 
Sbjct: 122 GCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEX 181

Query: 204 ARVLFHEMIGRGILP 218
           A  L+  MI +GI P
Sbjct: 182 ALKLWDMMIDKGITP 196



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 9/198 (4%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+ +E  ++ + M+    +  V  + VLIDG  KSG V +AI    RM D G  P+V  Y
Sbjct: 1   GKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 60

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +++GLCK   +E A + F       +  ++  Y++LIDG  K     EA  L   M+E
Sbjct: 61  SVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSE 120

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-----IGRGILPDEILCISLLKKHYER 233
            G   D   Y +L+  L++ G + EA  LF  M       + +    IL   + K H   
Sbjct: 121 KGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRN- 179

Query: 234 GNMDEAIELQNEMMGRGL 251
              + A++L + M+ +G+
Sbjct: 180 ---EXALKLWDMMIDKGI 194



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 1/179 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K ++ +Y  +I G       ED+  LL  M + G   + V  + +++   K G   E
Sbjct: 16  KGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEE 75

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL        + + +  + +  LIDGL K+G + EA   F  M + G   +   Y ALID
Sbjct: 76  ALDYFQTCXFNGLAINSMFYSSLIDGLGKAGRIDEAERLFEEMSEKGCTRDSYCYNALID 135

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            L K   ++ A  LF  M + +    T   YT LI G  K    + AL L + M + G+
Sbjct: 136 ALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYTILISGMFKDHRNEXALKLWDMMIDKGI 194



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 1/149 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++         NGL  N++  ++L+D   KAG 
Sbjct: 48  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFQTCXFNGLAINSMFYSSLIDGLGKAGR 107

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID L K G V EA+  F RM  + G    V  YT
Sbjct: 108 IDEAERLFEEMSEKGCTRDSYCYNALIDALTKHGKVDEAMXLFKRMEEEEGCDQTVYTYT 167

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            LI G+ K +  E A  L+D M  + + P
Sbjct: 168 ILISGMFKDHRNEXALKLWDMMIDKGITP 196


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 117/234 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I G C   K +D+  LL EM   GL  N  IC +L++ Y K GE  EA  ++  M+
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  ++    ++  L+DG C+ G   EA +   +M   G+ P V  Y  L+ GLC+    +
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  ++  M K  + PD   Y+ L+DG  K E+F+ A  L   +   G       + +++
Sbjct: 455 DALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 514

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL + G + EA  +F +M   G  PD I   +L+  + +  N+ +A +++  M
Sbjct: 515 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/192 (35%), Positives = 97/192 (50%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y   I GLC   K +D++   S +   G   +     TL+  Y  AG   EA  L DEM
Sbjct: 716 VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEM 775

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L   +   +VT+  LI+GLCKS  V  A   F ++   GL PNV  Y  LIDG CK   +
Sbjct: 776 LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNM 835

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A  L D+M +  + P    Y+ALI+G  KH   + ++ L N+M + GVD  L  Y +L
Sbjct: 836 DAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTL 895

Query: 192 VWGLSRCGHLQE 203
           V G  +  +  E
Sbjct: 896 VQGGFKTSNYNE 907



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 67/302 (22%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  ++  YG +I G C E   + +     EM ENGL+AN +IC+T++   ++ G   E
Sbjct: 606 RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDE 665

Query: 64  ALSLLDEMLD------------SRIEVTVV--------------------TFCVLIDGLC 91
           A  L+ +M+D            S I    +                     + + I GLC
Sbjct: 666 ANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLC 725

Query: 92  KSGLVREAIDYF------GRMPD-----------------------------FGLHPNVA 116
           K+G V +A  +F      G +PD                              GL PN+ 
Sbjct: 726 KTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIV 785

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y ALI+GLCK   ++RA+ LF ++ ++ + P+   Y  LIDGY K  +   A  LK++M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G+   +  Y++L+ GL + G ++ +  L ++MI  G+    I   +L++  ++  N 
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNY 905

Query: 237 DE 238
           +E
Sbjct: 906 NE 907



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+  +  Y T++ GLC    F+D+  +   M + G+  + V  +TL+D  FK   
Sbjct: 428 MLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMEN 487

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L  ++L      + +TF  +I GLCK G + EA + F +M D G  P+   Y  
Sbjct: 488 FEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRT 547

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK + + +A  +   M +  + P    Y +LI G  K     E  +L   M   G
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG 607

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+ G  + G L +A   + EM   G+  + I+C +++   Y  G +DEA 
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEAN 667

Query: 241 ELQNEMMGRGLL 252
            L  +M+  G  
Sbjct: 668 LLMQKMVDHGFF 679



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
           M  K +  ++  Y  +I G C + K ++++ +L  M+E   L  +      L+D Y + G
Sbjct: 287 MSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTG 346

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  +A+ LLDEML   ++  +     LI+G CK G + EA     RM D+ L P+   Y 
Sbjct: 347 KIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYN 406

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+DG C++     A NL D+M +  + P    Y  L+ G  +  +F +AL + + M + 
Sbjct: 407 TLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKX 466

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV  D   Y++L+ GL +  + + A  L+ +++ RG     I   +++    + G M EA
Sbjct: 467 GVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEA 526

Query: 240 IELQNEMMGRG 250
            E+ ++M   G
Sbjct: 527 EEIFDKMKDLG 537



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 125/281 (44%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +L +  ++I G C   +  +++ +++ M +  L  ++    TL+D Y + G  SEA 
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 422

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID-- 123
           +L D+ML   IE TV+T+  L+ GLC+ G   +A+  +  M   G+ P+   Y+ L+D  
Sbjct: 423 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGL 482

Query: 124 ---------------------------------GLCKKNCIERARNLFDEMPKRDMIPDT 150
                                            GLCK   +  A  +FD+M      PD 
Sbjct: 483 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 542

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LIDGY K  +  +A  +K  M    +   +  Y SL+ GL +   L E   L  E
Sbjct: 543 ITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTE 602

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  RG+ P+ +   +L+    + G +D+A     EM   GL
Sbjct: 603 MGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 102/208 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ GL     FE +  L  ++   G T + +   T++    K G+  EA  + D+M 
Sbjct: 475 YSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D       +T+  LIDG CK+  V +A    G M    + P++ +Y +LI GL K   + 
Sbjct: 535 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLV 594

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
              +L  EM  R + P+   Y ALIDG+ K     +A +    MTE G+  ++   +++V
Sbjct: 595 EXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMV 654

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDE 220
            GL R G + EA +L  +M+  G  PD 
Sbjct: 655 SGLYRLGRIDEANLLMQKMVDHGFFPDH 682



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 126/282 (44%), Gaps = 36/282 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+ +   ++   C + K +++   + +M+  G+  N V   +L++ Y   G+   A 
Sbjct: 222 IVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK 281

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-GRMPDFGLHPNVAVYTALIDG 124
            +L  M +  +   VVT+ +LI G CK   + EA     G   +  L P+   Y  LIDG
Sbjct: 282 GVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDG 341

Query: 125 LCKKNCIERARNLFDEMPK-----------------------------------RDMIPD 149
            C+   I+ A  L DEM +                                    ++ PD
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
           + +Y  L+DGY +     EA NL ++M + G++  +  Y +L+ GL R G   +A  ++H
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 461

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            M+  G+ PDE+   +LL   ++  N + A  L  +++ RG 
Sbjct: 462 LMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGF 503



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 23/249 (9%)

Query: 14  GTIIW----GLCIESKFEDS--KLLLSEMKENGLTANTVI----------------CTTL 51
           G +IW    G+  E  F  +   ++L    E GLT N +                 C +L
Sbjct: 138 GNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSL 197

Query: 52  MDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGL 111
           ++   K GE   A  +  +M+   I   V    ++++  CK G V EA  +  +M + G+
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
            PN+  Y +LI+G      +E A+ +   M ++ +  +   YT LI GY K     EA  
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 317

Query: 172 -LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L+    E  +  D  AY  L+ G  R G + +A  L  EM+  G+  +  +C SL+  +
Sbjct: 318 VLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGY 377

Query: 231 YERGNMDEA 239
            +RG + EA
Sbjct: 378 CKRGEIHEA 386



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 3/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      D   Y T+I G C  S    +  +   M+   ++ +  +  +L+   FK+  
Sbjct: 533 MKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRR 592

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LL EM    +   +VT+  LIDG CK G++ +A   +  M + GL  N+ + + 
Sbjct: 593 LVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICST 652

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GL +   I+ A  L  +M      PD   +      Y   +   ++L+   +   + 
Sbjct: 653 MVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLP 712

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            ++    Y   + GL + G + +AR  F  +  +G +PD     +L+  +   GN+DEA 
Sbjct: 713 NNI---VYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769

Query: 241 ELQNEMMGRGLL 252
            L++EM+ RGL+
Sbjct: 770 RLRDEMLRRGLV 781



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 62/124 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  Y  +I GLC     + ++ L  ++ + GL  N V   TL+D Y K G 
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L D+M++  I  +VVT+  LI+GLCK G +  ++    +M   G+   +  Y  
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894

Query: 121 LIDG 124
           L+ G
Sbjct: 895 LVQG 898



 Score = 39.7 bits (91), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 2/148 (1%)

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
           G   +F   P   V+  ++    +K   + A  +FD M K   IP   +  +L++  +K+
Sbjct: 147 GVYREFAFSP--TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKN 204

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
                A  +  +M  VG+  D+   + +V    + G + EA     +M   G+ P+ +  
Sbjct: 205 GETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTY 264

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
            SL+  +   G+++ A  +   M  +G+
Sbjct: 265 HSLINGYVSLGDVEAAKGVLKFMSEKGV 292


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 128/253 (50%), Gaps = 1/253 (0%)

Query: 1   MKGKN-IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           + G+N    ++  Y  +I G CI    + + L+++ M + G +AN V   T++  Y  +G
Sbjct: 415 LMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSG 474

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             + AL +LD M D   +    ++  LI G CK   +  A   F  M D GL PN   YT
Sbjct: 475 NTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYT 534

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ALIDG CK   ++ A +L + M +    P+   Y  LI G  K  +F  A  L   M E 
Sbjct: 535 ALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEE 594

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  ++  YT+++ GL + G    A  +F++MI +G LP+ +   SL++   + G ++EA
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEA 654

Query: 240 IELQNEMMGRGLL 252
             L  E+   GL+
Sbjct: 655 ENLFAELERHGLI 667



 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 119/250 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +   A+L  Y TII G C       +  +L  M++ G   +    T L+  + K  +
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISK 510

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L +EM+D  +    VT+  LIDG CK   +  A      M   G  PNV  Y  
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL K+N    A  L   M +  + P+   YTA+IDG  K+ S   AL + N+M E G
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG 630

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y+SL+  L + G ++EA  LF E+   G++PDEI  + +++ +   G ++ A 
Sbjct: 631 CLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 241 ELQNEMMGRG 250
                M+  G
Sbjct: 691 NFLGRMIKAG 700



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 118/240 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  L    + + + ++L+ M  NG + N V    ++  Y   G+P +A+ +++ ML
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+  +I G C SG    A+     M D G  P+   YT LI G CK + +E
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM    + P+   YTALIDGY K E    A +L   M   G   ++  Y  L+
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLI 572

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL++  +   A  L   MI  GI P+ +   +++    + G+   A+E+ N+M+ +G L
Sbjct: 573 HGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL 632



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 121/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ +L +Y  +I  LC +    D++ ++ ++ E+ ++ +T   T+++  + +  +
Sbjct: 206 MLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHD 265

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL + ++M     E   VT+  LI+GLC SG V EA D    M   G+ P     T 
Sbjct: 266 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 325

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I  LC   C E A  LF +M  +   P+   YTALI G       K A+ L +RM+  G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y +L+  L     ++ A V+ + M   G  P+ +    ++K +   G+  +A+
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445

Query: 241 ELQNEMMGRG 250
            + N M+ RG
Sbjct: 446 LVMNNMLQRG 455



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 90/183 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C + K + +  LL  MK +G   N      L+    K    S A  L   M+
Sbjct: 533 YTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMI 592

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I   VVT+  +IDGLCK+G    A++ F +M + G  PN+  Y++LI  L ++  +E
Sbjct: 593 EEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVE 652

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A NLF E+ +  +IPD   Y  +I+ Y+     + A N   RM + G    L  Y  L+
Sbjct: 653 EAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712

Query: 193 WGL 195
            GL
Sbjct: 713 KGL 715



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 117/245 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   Y ++I G C +   + +  + ++M + G   NTV  +TL++    +G  +EA 
Sbjct: 246 MSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAF 305

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EM+   I  T  T    I  LC  G   +A   F  M + G  PNV  YTALI GL
Sbjct: 306 DLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGL 365

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    ++ A  LF  M +  + P+T  Y ALI+  +++   K A  + N M   G   ++
Sbjct: 366 CVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNI 425

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  ++ G    G  ++A ++ + M+ RG   + +   +++K + + GN   A+ + + 
Sbjct: 426 VTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDL 485

Query: 246 MMGRG 250
           M   G
Sbjct: 486 MRDGG 490



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 110/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC   +  ++  L+ EM  +G+      CT  + A    G   +A  L  +M 
Sbjct: 288 YSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMK 347

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   E  V T+  LI GLC SGL++ AI  F RM   G+ PN   Y ALI+ L +   I+
Sbjct: 348 NKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIK 407

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + + M +    P+   Y  +I GY      K+A+ + N M + G   +L  Y +++
Sbjct: 408 YAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTII 467

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G    G+   A  +   M   G  PDE     L+    +   M+ A  L NEM+  GL
Sbjct: 468 KGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGL 526



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 96/189 (50%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +  +S LD +  S + + +  +  L+  L + G+    +D + RM   G+ PN+ +Y A+
Sbjct: 162 ARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+ LCK   +  A  +  ++ + +M PDT  YT++I G+ +      AL + N+M + G 
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           + +   Y++L+ GL   G + EA  L  EMI  GILP    C   +    + G  ++A  
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 242 LQNEMMGRG 250
           L  +M  +G
Sbjct: 342 LFVDMKNKG 350



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 118/275 (42%), Gaps = 26/275 (9%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + ++  Y  +I GL  ++ F  ++ L   M E G+  N V  T ++D   K G 
Sbjct: 556 MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 615

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL + ++M++      ++T+  LI  L + G V EA + F  +   GL P+   Y  
Sbjct: 616 TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 675

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE---------------- 164
           +I+       +E A N    M K    P    Y  LI G LK+E                
Sbjct: 676 MIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG-LKNEYLLADQRLAALPDVVP 734

Query: 165 --SF------KEALN-LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
             SF      ++A++ +  ++ E+   L +    +LV  LS  G   EA  L   MI +G
Sbjct: 735 NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 794

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + PD+    SLL       N+D A+ +   M  +G
Sbjct: 795 LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQG 829



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 28/267 (10%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  Y ++I  L  E K E+++ L +E++ +GL  + +    +++AY  +G+   A + L
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFL 693

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD------FG------------ 110
             M+ +  + T+ T+ VLI GL    L+  A      +PD      FG            
Sbjct: 694 GRMIKAGCQPTLWTYGVLIKGLKNEYLL--ADQRLAALPDVVPNCSFGYQTTDQDAVSVM 751

Query: 111 ------LHP--NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
                 L P  +V V  AL+  L        A  L   M  + + PD  AY +L+   L+
Sbjct: 752 SAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             +   A+ +   M+  G ++ LN Y  L+  L +    +EAR+ F  M+ R   PD+++
Sbjct: 812 VRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVV 871

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGR 249
              L+      G  D  +E  + M  R
Sbjct: 872 QAVLIDGLLRDGYKDLCMEFLHIMETR 898



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 100/224 (44%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
            L  + ++GL       + L+    + G  +  +     ML   ++  ++ +  +I+ LC
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G V +A     ++ +  + P+   YT++I G C+K+ ++ A  +F++M K    P+T 
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ LI+G        EA +L   M   G+    +  T  +  L   G  ++A  LF +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             +G  P+     +L+      G +  AI L + M   G+   +
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 122/248 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K D+  Y  +I G+C E + +++   L+ M   G   N +    ++ +    G 
Sbjct: 269 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGR 328

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL +ML      +VVTF +LI+ LC+  L+  AID   +MP  G  PN   Y  
Sbjct: 329 WMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNP 388

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C++  ++RA    + M  R   PD   Y  L+    K      A+ + N+++  G
Sbjct: 389 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L  Y +++ GL++ G  + A  L  EM  +G+ PD I   +LL+     G +DEAI
Sbjct: 449 CSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAI 508

Query: 241 ELQNEMMG 248
           ++ ++M G
Sbjct: 509 KIFHDMEG 516



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 35/282 (12%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  Y TI+  LC   K +++  +L    +     + +  T L++A        +A
Sbjct: 203 SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQA 262

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN---------- 114
           + LLDEM     +  VVT+ VLI+G+CK G + EAI +   MP +G  PN          
Sbjct: 263 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRS 322

Query: 115 -------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
                                    V  +  LI+ LC+K  + RA ++ ++MPK   +P+
Sbjct: 323 MCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPN 382

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
           + +Y  L+ G+ + +    A+     M   G   D+  Y +L+  L + G +  A  + +
Sbjct: 383 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILN 442

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           ++  +G  P  I   +++    + G  + A+EL  EM  +GL
Sbjct: 443 QLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGL 484



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 112/241 (46%), Gaps = 3/241 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++I G C   K + +  ++  ++ +G   + +    L+  Y K+GE  +AL +L+ M   
Sbjct: 146 SLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM--- 202

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +   VVT+  ++  LC SG ++EA++   R      +P+V  YT LI+  C  + + +A
Sbjct: 203 SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQA 262

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L DEM K+   PD   Y  LI+G  K     EA+   N M   G   ++  +  ++  
Sbjct: 263 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRS 322

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           +   G   +A  L  +M+ +G  P  +    L+     +  +  AI++  +M   G +  
Sbjct: 323 MCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPN 382

Query: 255 S 255
           S
Sbjct: 383 S 383



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 3/226 (1%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + E+    L  M   G   + + CT+L+  + ++G+  +A  +++ + +S     V+T+ 
Sbjct: 121 ELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYN 180

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VLI G CKSG + +A++   RM    + P+V  Y  ++  LC    ++ A  + D   +R
Sbjct: 181 VLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQR 237

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           +  PD   YT LI+         +A+ L + M + G   D+  Y  L+ G+ + G L EA
Sbjct: 238 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 297

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               + M   G  P+ I    +L+     G   +A  L ++M+ +G
Sbjct: 298 IKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 3/242 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I G C   + + +  +L  M    +  + V   T++ +   +G+  EA+ +L
Sbjct: 175 DVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVL 231

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D  L       V+T+ +LI+  C    V +A+     M   G  P+V  Y  LI+G+CK+
Sbjct: 232 DRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 291

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A    + MP     P+   +  ++        + +A  L + M   G    +  +
Sbjct: 292 GRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTF 351

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+  L R   L  A  +  +M   G +P+ +    LL    +   MD AIE    M+ 
Sbjct: 352 NILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS 411

Query: 249 RG 250
           RG
Sbjct: 412 RG 413



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 86/189 (45%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L +M ++G   N++    L+  + +  +   A+  L+ M+       +VT+  L+  LC
Sbjct: 370 VLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALC 429

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G V  A++   ++   G  P +  Y  +IDGL K    E A  L +EM ++ + PD  
Sbjct: 430 KDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDII 489

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ L+ G  +     EA+ + + M  + +      Y +++ GL +      A      M
Sbjct: 490 TYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM 549

Query: 212 IGRGILPDE 220
           + +G  P E
Sbjct: 550 VEKGCKPTE 558



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 3/194 (1%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           + GE  E L  L+ M+       V+    LI G C+SG  ++A      + + G  P+V 
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y  LI G CK   I++A  + + M    + PD   Y  ++         KEA+ + +R 
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 234

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            +     D+  YT L+        + +A  L  EM  +G  PD +    L+    + G +
Sbjct: 235 LQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 294

Query: 237 DEAIELQNEMMGRG 250
           DEAI+  N M   G
Sbjct: 295 DEAIKFLNNMPSYG 308



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 3/161 (1%)

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L ++G + E + +  RM   G  P+V   T+LI G C+    ++A  + + +     +PD
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  LI GY K     +AL +  RM+   V  D+  Y +++  L   G L+EA  +  
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLD 232

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             + R   PD I    L++       + +A++L +EM  +G
Sbjct: 233 RQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG 273



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 63/125 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K     L  Y T+I GL    K E +  LL EM+  GL  + +  +TL+    + G+
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  +M    I+ + VT+  ++ GLCK+     AID+   M + G  P  A YT 
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563

Query: 121 LIDGL 125
           LI+G+
Sbjct: 564 LIEGI 568


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 127/252 (50%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   +  ++ G   + K +++   LS M + G   +   CT ++ A  + G 
Sbjct: 231 MSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGL 290

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+    +M+D   +  ++ F  LIDGLCK G +++A +    M   G  PNV  +TA
Sbjct: 291 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 350

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LIDGLCK+   E+A  LF ++ + D+  P+   YT++I GY K +    A  L +RM E 
Sbjct: 351 LIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 410

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  ++N YT+L+ G  + G+   A  L + M   G  P+     +++    ++    EA
Sbjct: 411 GLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEA 470

Query: 240 IELQNEMMGRGL 251
            EL N+    GL
Sbjct: 471 YELLNKAFSCGL 482



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 114/245 (46%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  Y ++I G C E K   +++L S MKE GL  N    TTL++ + KAG    A  
Sbjct: 378 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYE 437

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L++ M D      + T+  +ID LCK     EA +   +    GL  +   YT LI   C
Sbjct: 438 LMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQC 497

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K++ I++A   F  M K     D      LI  + + +  KE+  L   +  +G+     
Sbjct: 498 KQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKE 557

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YTS++ G  + G    A   FH M   G +PD     SL+    ++  +DEA +L   M
Sbjct: 558 TYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 617

Query: 247 MGRGL 251
           + RGL
Sbjct: 618 IDRGL 622



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 119/234 (50%), Gaps = 2/234 (0%)

Query: 20  LCIESKFED-SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
           + IES   D ++ +  EM   G+  ++     ++   F+ G+  EA   L  M+      
Sbjct: 214 IAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIP 273

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
              T  +++  LC++GLV  AI YF +M D G  PN+  +T+LIDGLCKK  I++A  + 
Sbjct: 274 DNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEML 333

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV-DLDLNAYTSLVWGLSR 197
           +EM +    P+   +TALIDG  K    ++A  L  ++    +   +++ YTS++ G  +
Sbjct: 334 EEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCK 393

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              L  A +LF  M  +G+ P+     +L+  H + GN D A EL N M   G 
Sbjct: 394 EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGF 447



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 115/240 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  ++  Y T+I G C    F+ +  L++ M + G   N      ++D+  K   
Sbjct: 407 MKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSR 466

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL++     +E   VT+ +LI   CK   +++A+ +F RM   G   ++ +   
Sbjct: 467 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNI 526

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C++  ++ +  LF  +    ++P    YT++I GY K   F  AL   + M   G
Sbjct: 527 LIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHG 586

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y SL+ GL +   + EA  L+  MI RG+ P E+  ++L  ++ +R +   A+
Sbjct: 587 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAM 646



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 119/286 (41%), Gaps = 36/286 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K +L  + ++I GLC +   + +  +L EM  NG   N    T L+D   K G   +A 
Sbjct: 306 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 365

Query: 66  SLL-------------------------------DEMLDSRIE-----VTVVTFCVLIDG 89
            L                                 EML SR++       V T+  LI+G
Sbjct: 366 RLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 425

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
            CK+G    A +    M D G  PN+  Y A+ID LCKK+    A  L ++     +  D
Sbjct: 426 HCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEAD 485

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              YT LI    K    K+AL    RM + G + D+     L+    R   ++E+  LF 
Sbjct: 486 GVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 545

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            ++  G++P +    S++  + + G+ D A++  + M   G +  S
Sbjct: 546 LVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDS 591



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 93/192 (48%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++  + + G  +EA+ ++ +M +  +  + +T   +++   +SGL+  A + F  M   G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+ + +  ++ G  +   I+ A      M +R  IPD    T ++    ++     A+
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
               +M ++G   +L  +TSL+ GL + G +++A  +  EM+  G  P+     +L+   
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 231 YERGNMDEAIEL 242
            +RG  ++A  L
Sbjct: 356 CKRGWTEKAFRL 367



 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 75/157 (47%)

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G + EA+     M + GL P+      +++   +   I+ A N+FDEM  R + PD++++
Sbjct: 184 GRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSF 243

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             ++ G  +    +EA    + M + G   D    T ++  L   G +  A   F +MI 
Sbjct: 244 KLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMID 303

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  P+ I   SL+    ++G++ +A E+  EM+  G
Sbjct: 304 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 340


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 16/263 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y  +I  LC  +K E + LL  EMK  G+T +    T L+D++ KAG 
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L +EM       TVVT+  LI    K+  V +A D F RM D G  PN   Y A
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398

Query: 121 LIDGLCKKNCIERARNLFDEM-------------PKRD---MIPDTTAYTALIDGYLKHE 164
           L+DGLCK   I +A  ++ ++             P  D   + P+   Y AL+DG  K  
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
               A  L + M   G + +   Y +L+ G  + G +  A+ +F +M   G LP      
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 518

Query: 225 SLLKKHYERGNMDEAIELQNEMM 247
           SL+ + ++ G +D A+++ ++M+
Sbjct: 519 SLIDRMFKDGRLDLAMKVLSQML 541



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 116/250 (46%), Gaps = 16/250 (6%)

Query: 13  YGTIIWGLC----IESKFE------------DSKLLLSEMKENGLTANTVICTTLMDAYF 56
           YG ++ GLC    I   FE            DS         + L  N V    L+D   
Sbjct: 396 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 455

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           KA +   A  LLD ML S  E   + +  LIDG CK+G +  A + F +M   G  P+V 
Sbjct: 456 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 515

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            YT+LID + K   ++ A  +  +M K    P+   YTA+IDG  +    ++AL L + M
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G   ++  YT+L+ GL + G +  +  LF +M  +G  P+ +    L+      G +
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 635

Query: 237 DEAIELQNEM 246
           D+A  L  EM
Sbjct: 636 DKARLLLGEM 645



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 128/301 (42%), Gaps = 51/301 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D+  Y  +I   C     E ++ L  EM+  G +   V  T L+ AY KA +
Sbjct: 314 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 373

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--------PDF--- 109
             +A  +   M+D+      VT+  L+DGLCK+G + +A + + ++         DF   
Sbjct: 374 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 433

Query: 110 ----------------------------------------GLHPNVAVYTALIDGLCKKN 129
                                                   G  PN  VY ALIDG CK  
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I+ A+ +F +M K   +P    YT+LID   K      A+ + ++M +     ++  YT
Sbjct: 494 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 553

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +++ GL R G  ++A  L   M  +G  P+ +   +L+    + G +D +++L  +M  +
Sbjct: 554 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613

Query: 250 G 250
           G
Sbjct: 614 G 614



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 40/261 (15%)

Query: 22  IESKFEDSKL-----LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           I+  F+D +L     +LS+M ++  T N V  T ++D   + GE  +AL LL  M +   
Sbjct: 521 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 580

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR- 135
              VVT+  LIDGL K+G +  ++D F +M   G  PN   Y  LI+ LC    +++AR 
Sbjct: 581 SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARL 640

Query: 136 --------------------------------NLFDEMPKRDMIPDTTAYTALIDGYLKH 163
                                            + +EM     +P    Y  LID + K 
Sbjct: 641 LLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKA 700

Query: 164 ESFKEALNLKNRMTEV--GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
              + A+ L   M EV   V  D + Y SL+  L     ++EA  L+ EM  RG +P+  
Sbjct: 701 GRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELS 760

Query: 222 LCISLLKKHYERGNMDEAIEL 242
           + + L+K   E    DEA++L
Sbjct: 761 VFVCLIKGLVEVKKWDEALQL 781



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 2/236 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K + ++ +  +M + G   +    T+L+D  FK G    A+ +L +M
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L       VVT+  +IDGLC+ G   +A+     M + G  PNV  YTALIDGL K   I
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + + +LF +M ++   P+   Y  LI+         +A  L   M +      L  Y   
Sbjct: 601 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + G S+      +  +  EM   G +P   +   L+    + G ++ A+EL  EMM
Sbjct: 661 IQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 714



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 6/208 (2%)

Query: 12  LYGTIIWGLCIESKFEDSKLL------LSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +Y   I  +C + K     LL        EM       N V            G+  +A 
Sbjct: 214 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 273

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EM+         T+  +I  LC +  V +A   F  M   G+ P+V  YT LID  
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 333

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   IE+A+ LF+EM      P    YTALI  YLK +   +A ++ +RM + G   + 
Sbjct: 334 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 393

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             Y +LV GL + G++ +A  ++ ++IG
Sbjct: 394 VTYGALVDGLCKAGNISKAFEVYAKLIG 421



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 8/244 (3%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD-- 69
           L+ +++   C E  +  +  LL+ M   G     V+    + +     E   +  LLD  
Sbjct: 179 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS-ICGQEKLPSPDLLDLA 237

Query: 70  -----EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
                EML +   +  V        LC  G   +A      M   G  P+ + Y+ +I  
Sbjct: 238 EKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 297

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC    +E+A  LF EM    + PD   YT LID + K    ++A  L   M  VG    
Sbjct: 298 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 357

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  YT+L+    +   + +A  +FH M+  G  P+++   +L+    + GN+ +A E+  
Sbjct: 358 VVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYA 417

Query: 245 EMMG 248
           +++G
Sbjct: 418 KLIG 421



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 108/288 (37%), Gaps = 41/288 (14%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           ++ K D  L   +I GL   S F+++   L  M+ N    N V   TL+  + K  +   
Sbjct: 101 EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 160

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              +++ M+          F  L+   C       A     RM   G  P   VY   I 
Sbjct: 161 CKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG 220

Query: 124 GLCKK----------------------NCI-------------------ERARNLFDEMP 142
            +C +                      NC+                   ++A  L  EM 
Sbjct: 221 SICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 280

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           ++  +PDT+ Y+ +I         ++A  L   M  VGV  D+  YT L+    + G ++
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +A+ LF EM   G  P  +   +L+  + +   + +A ++ + M+  G
Sbjct: 341 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 8/196 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +   Y  +I  LC     + ++LLL EMK+             +  + K+  
Sbjct: 610 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI 669

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF--GLHPNVAVY 118
            S  L +L+EM           + +LID   K+G +  A++    M +    +  +  +Y
Sbjct: 670 AS--LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMY 727

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT- 177
            +LI  LC  + +E A  L+ EM +R  +P+ + +  LI G ++ + + EAL L   +  
Sbjct: 728 ASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICH 787

Query: 178 EVGVDLDLNAYTSLVW 193
           EVG+   L +YT+ ++
Sbjct: 788 EVGL---LLSYTTQIF 800



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 96/278 (34%), Gaps = 44/278 (15%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G     LC E ++ D+   L  ++      +TV+CT ++    +A    EA+S L  M  
Sbjct: 79  GCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRC 135

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
           +     VVT+  L+ G  K   +         M   G +PN +++ +L+   C +     
Sbjct: 136 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 195

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHE----------------------------- 164
           A  L + M      P    Y   I      E                             
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255

Query: 165 ------------SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
                        F +A  L   M   G   D + Y+ ++  L     +++A +LF EM 
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             G+ PD      L+    + G +++A  L  EM   G
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 92/258 (35%), Gaps = 44/258 (17%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           +K+ G   + V    L+     AG+      +  EM +S   +   T       LCK G 
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 96  VREAID-------------------------YFGRMPDFGLH--------PNVAVYTALI 122
             +A+D                         YF     F LH        PNV  Y  L+
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSF-LHRMRCNSCIPNVVTYRTLL 149

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G  KK  +   + + + M      P+ + + +L+  Y   + +  A  L NRMT  G  
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 209

Query: 183 LDLNAYTSLVWGLSRCGH--------LQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
                Y   +  +  CG         L  A  ++ EM+    + +++   +  +     G
Sbjct: 210 PGYVVYNIFIGSI--CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 235 NMDEAIELQNEMMGRGLL 252
             D+A +L  EMM +G +
Sbjct: 268 KFDKAFQLIKEMMRKGFV 285


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 121/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G       +    L + M  +G+  +    T L++   K  +  EA  L +EML
Sbjct: 174 FNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEML 233

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +    VTF  LIDG CKSG V  A++ + +M   G  P++  Y  LI GLC+K  ++
Sbjct: 234 DKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLK 293

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +AR+L  EM  + + PD   YT LIDG  K    + A  L+ RM E  + LD  AYT+L+
Sbjct: 294 QARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALI 353

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL + G   +A  +  EM+  G+ P+      ++    ++G++  A +L  EM   G
Sbjct: 354 SGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDG 411



 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 119/235 (50%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G   +      LM  + K GE   A S+ D + 
Sbjct: 116 YFKLVWGF------------YKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  LI+G  + G + +       M   G+HP+V   T LI+GLCK++ ++
Sbjct: 164 KCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM  + ++P+   +T LIDG+ K      AL +  +M   G   DL  Y +L+
Sbjct: 224 EANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL R G L++AR L  EM  +G+ PD+I   +L+    + G+++ A EL+  M+
Sbjct: 284 YGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMI 338



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 109/218 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+     +I GLC ESK +++  L +EM + GL  N V  TTL+D + K+G 
Sbjct: 197 MHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +ML       ++T+  LI GLC+ G +++A D    M   GL P+   YT 
Sbjct: 257 VDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A  L   M +  +  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  +   YT ++ G  + G ++ A  L  EM   G +P
Sbjct: 377 LKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVP 414



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 103/208 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+         +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK+  I  A+++FD + K  + P   ++  LI+GY++
Sbjct: 124 YKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIR 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                +   LK  M   GV  D+   T L+ GL +   + EA  LF+EM+ +G++P+ + 
Sbjct: 184 LGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRG 250
             +L+  H + G +D A+E+  +M+ +G
Sbjct: 244 FTTLIDGHCKSGRVDLALEIYKQMLRQG 271



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 51/117 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K D   Y T+I G C E   E +  L   M E  +  + V  T L+    + G 
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGR 361

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
             +A  +L EML   ++    T+ ++I+G CK G V+ A      M   G  P V  
Sbjct: 362 AVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVPCVVT 418


>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
          Length = 655

 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 120/247 (48%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           L  + ++++G C E K  ++K +L +++E G   + V+   L+  Y  AG+  +A  LL 
Sbjct: 260 LKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLK 319

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM     E  V++F  LI  LC    + EA+  F  M   G   +   YT LI G CK  
Sbjct: 320 EMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWG 379

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I +   L D M ++  IP+   Y  ++  + K E  +E + L   M ++G   DLN Y 
Sbjct: 380 KISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYN 439

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            ++    + G ++E   +++EM   G+ P     + ++     +  + EA E   EM+GR
Sbjct: 440 IVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGR 499

Query: 250 GLLSGSK 256
           GLLS  +
Sbjct: 500 GLLSAPQ 506



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 1/219 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L EM + G   +  +   L+DA  K G   EA SL ++M   R   T+  F  L+ G C
Sbjct: 213 VLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDM-RIRFTPTLKHFTSLLYGWC 271

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G + EA     ++ + G  P++ VY  L+ G      +  A +L  EM +++  P+  
Sbjct: 272 REGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVM 331

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           ++T LI      +  +EA+ +   M   G   D   YT+L+ G  + G + +   L   M
Sbjct: 332 SFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNM 391

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I +G +P+ +  + ++  H ++  ++E IEL  EM   G
Sbjct: 392 IQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIG 430



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 5/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+     AD   Y T+I G C   K      LL  M + G   N +    +M A+ K  E
Sbjct: 356 MQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEE 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L++EM        +  + ++I   CK G ++E +  +  M   GL P +  +  
Sbjct: 416 LEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVI 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           +I G   + C+  A   F EM  R ++  P       L++  L+ E  + + ++ + +  
Sbjct: 476 MIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMT 535

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL---LKKHYERGN 235
            G DL++ A+T  +  L   GH++EA     +M+  G++P       L   L+K Y R  
Sbjct: 536 KGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQI 595

Query: 236 MDEAIELQNEM 246
             E  E   +M
Sbjct: 596 AAEITEKVRKM 606



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 95/186 (51%), Gaps = 2/186 (1%)

Query: 66  SLLDEMLDSRIE-VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +L++EM     + V+   F VL+     + +V++AI+    MP +G  P+  V+  L+D 
Sbjct: 176 ALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDA 235

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK   ++ A +LF++M  R   P    +T+L+ G+ +     EA  +  ++ E G + D
Sbjct: 236 LCKNGSVKEAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPD 294

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y +L+ G +  G + +A  L  EM  +   P+ +   +L++    +  M+EA+ +  
Sbjct: 295 IVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFF 354

Query: 245 EMMGRG 250
           EM   G
Sbjct: 355 EMQSCG 360


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  123 bits (308), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 126/246 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+    +I++GLC   K  ++ +LL EM   GL  N V  TT++ A  K+G   EA 
Sbjct: 267 VMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAF 326

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +   +M+   I + +V    ++DGL K+G  +EA + F  +    L PN   YTAL+DG 
Sbjct: 327 NHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGH 386

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +E A  +  +M K  ++P+   ++++I+GY K     +A+ +  +M ++ +  ++
Sbjct: 387 CKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNV 446

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ G  R G  + A   + EM   G+  + I+   LL      G M EA  L  +
Sbjct: 447 FVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKD 506

Query: 246 MMGRGL 251
           ++ +G+
Sbjct: 507 ILSKGI 512



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 125/269 (46%), Gaps = 21/269 (7%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N   D   Y T++WG C     +    LLSEM + G+  ++V C  L+  Y + G    
Sbjct: 69  RNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQY 128

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  ++  ++   + +  +    L+DG C+ GLV  A+D        G+ P++  Y  L++
Sbjct: 129 AEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVN 188

Query: 124 GLCKKNCIERARNLFDEMPK---------------------RDMIPDTTAYTALIDGYLK 162
             CK+  + +A ++ +E+                       RD+ P    +T LI  Y K
Sbjct: 189 AFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCK 248

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           H    +  +L  +M   GV  D+   +S+++GL R G L EA +L  EM   G+ P+ + 
Sbjct: 249 HRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVS 308

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +++    + G + EA   Q++M+ RG+
Sbjct: 309 YTTIISALLKSGRVMEAFNHQSQMVVRGI 337



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 38/294 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+++ D+  Y  +  GL    K+E  K + S M E GLT + V   ++M+ YF  G+
Sbjct: 542 MTEKDMQFDVVAYNALTKGLLRLGKYE-PKSVFSRMIELGLTPDCVTYNSVMNTYFIQGK 600

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF------GRMP------- 107
              AL LL+EM    +   +VT+ +LI GLCK+G + + I         G +P       
Sbjct: 601 TENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKF 660

Query: 108 ----------------------DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                 D GL+ N  VY  LI  LC+    ++A  +  EM  + 
Sbjct: 661 LLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKG 720

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +  D   Y ALI GY      ++A N  ++M   G+  ++  Y +L+ GLS  G +++A 
Sbjct: 721 ISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDAD 780

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL--SGSKN 257
            L  EM  RG++P+      L+  H   GN  ++I+L  EM+ +G +  +G+ N
Sbjct: 781 KLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYN 834



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 119/234 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII  L    +  ++    S+M   G++ + V+CTT+MD  FKAG+  EA  +   +L
Sbjct: 309 YTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTIL 368

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +    VT+  L+DG CK G V  A     +M    + PNV  ++++I+G  KK  + 
Sbjct: 369 KLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLN 428

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  +  +M + +++P+   Y  L+DGY +    + A      M   G++ +   +  L+
Sbjct: 429 KAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILL 488

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             L R G ++EA+ L  +++ +GI  D     SL+  +++ GN   A+ +  EM
Sbjct: 489 NNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEM 542



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 125/255 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  ++  Y  +I GLC     E    +L EM   G     +I   L+ AY ++ +
Sbjct: 611 MKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRK 670

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L +  +++D  + +  + +  LI  LC+ G+ ++A      M   G+  ++  Y A
Sbjct: 671 ADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNA 730

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C  + +E+A N + +M    + P+ T Y AL++G   +   ++A  L + M E G
Sbjct: 731 LIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERG 790

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y  LV G  R G+ +++  L+ EMI +G +P       L++ + + G M +A 
Sbjct: 791 LVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQAR 850

Query: 241 ELQNEMMGRGLLSGS 255
           EL NEM+ RG +  S
Sbjct: 851 ELLNEMLTRGRIPNS 865



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 131/248 (52%), Gaps = 1/248 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+  +   Y  ++ G C     E ++ +L +M++  +  N V  +++++ Y K G  ++A
Sbjct: 371 NLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKA 430

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + +L +M+   I   V  + +L+DG  ++G    A  ++  M  +GL  N  ++  L++ 
Sbjct: 431 VEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNN 490

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L +   ++ A++L  ++  + +  D   Y++L+DGY K  +   AL++   MTE  +  D
Sbjct: 491 LKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFD 550

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           + AY +L  GL R G   E + +F  MI  G+ PD +   S++  ++ +G  + A++L N
Sbjct: 551 VVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLN 609

Query: 245 EMMGRGLL 252
           EM   G++
Sbjct: 610 EMKSYGVM 617



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 127/248 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           ++++  +  + T+I   C     +D   L  +M  +G+  + V C++++    + G+ +E
Sbjct: 230 RDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTE 289

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EM +  ++   V++  +I  L KSG V EA ++  +M   G+  ++ + T ++D
Sbjct: 290 AAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMD 349

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K    + A  +F  + K +++P+   YTAL+DG+ K    + A  +  +M +  V  
Sbjct: 350 GLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLP 409

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  ++S++ G ++ G L +A  +  +M+   I+P+  +   LL  ++  G  + A    
Sbjct: 410 NVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFY 469

Query: 244 NEMMGRGL 251
            EM   GL
Sbjct: 470 KEMKSWGL 477



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 126/285 (44%), Gaps = 34/285 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +++  ++  + +II G   +     +  +L +M +  +  N  +   L+D YF+ G+
Sbjct: 402 MEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQ 461

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM    +E   + F +L++ L +SG ++EA      +   G++ +V  Y++
Sbjct: 462 HEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSS 521

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF-------------- 166
           L+DG  K+     A ++  EM ++DM  D  AY AL  G L+   +              
Sbjct: 522 LMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGL 581

Query: 167 --------------------KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
                               + AL+L N M   GV  ++  Y  L+ GL + G +++   
Sbjct: 582 TPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVIS 641

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + HEM+  G +P  I+   LLK +      D  +++  +++  GL
Sbjct: 642 VLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGL 686



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 21/263 (7%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEM------KENG---------------LTAN 44
           +K D+  Y T++   C       ++ +++E+       E+G               L   
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPT 235

Query: 45  TVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG 104
            V  TTL+ AY K     +  SL ++M+ S +   VVT   ++ GLC+ G + EA     
Sbjct: 236 VVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLR 295

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            M + GL PN   YT +I  L K   +  A N   +M  R +  D    T ++DG  K  
Sbjct: 296 EMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAG 355

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             KEA  +   + ++ +  +   YT+L+ G  + G ++ A  +  +M    +LP+ +   
Sbjct: 356 KSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFS 415

Query: 225 SLLKKHYERGNMDEAIELQNEMM 247
           S++  + ++G +++A+E+  +M+
Sbjct: 416 SIINGYAKKGMLNKAVEVLRKMV 438



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 23/245 (9%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I AD+  Y  +I G C  S  E +    S+M  +G++ N      L++     G   +
Sbjct: 719 KGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRD 778

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L+ EM +  +     T+ +L+ G  + G  R++I  +  M   G  P    Y  LI 
Sbjct: 779 ADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQ 838

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
              K   + +AR L +EM  R  IP+++ Y  LI G+ K       L+ +  M       
Sbjct: 839 DYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCK-------LSCQPEMDR----- 886

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
                      L +  +  EA+ L  EM  +G +P E   + +       G  D+A  L 
Sbjct: 887 -----------LLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFSAPGKRDDAKRLL 935

Query: 244 NEMMG 248
             ++G
Sbjct: 936 KTVIG 940


>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 418

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 115/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M  +G+  +    + L++   K  +  +A  L DEMLD  +    VTF  LIDG C
Sbjct: 193 LKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLC+K  +++AR+L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD   YT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G+ PD I    ++ +  ++G++    +L  EM   G
Sbjct: 373 LSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 108/221 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK +D+  L  EM + GL  N V  TTL+D + K G 
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLC+ G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M + ++  D   YTALI G  +   + +A  +   M  VG
Sbjct: 317 LIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVV 417



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 120/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G  A+      LM  + K G+   A S+ + + 
Sbjct: 116 YFKLVWGF------------YEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  + G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM  + ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL R G L++AR L  EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 284 YGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMI 338



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 103/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK   I  A+++F+ + K  + P   ++  L++GY++
Sbjct: 124 YEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK  M   GV  D+  Y+ L+ GL +   + +A  LF EM+ +G++P+ + 
Sbjct: 184 LGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 41.6 bits (96), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 43/82 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI+ D   Y  +I GLC E ++ D++ +L EM   GL  +T+  T +++ + K G+
Sbjct: 337 MIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGD 396

Query: 61  PSEALSLLDEMLDSRIEVTVVT 82
                 LL EM       +VVT
Sbjct: 397 VWTGSKLLKEMQRDGQMPSVVT 418


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D   + T+I GL + +K  ++  L+ +M + G   + V   T+++   K G+   AL+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL++M  +RI+  VV F  +ID LCK   V  A+D F  M   G+ PNV  Y +LI+ LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L   M ++ + P+   + ALID + K     EA  L   M +  +D D  
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y  L+ G      L EA+ +F  M+ +  LP+     +L+    +   +++ +EL  EM
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424

Query: 247 MGRGLLSGS 255
             RGL+  +
Sbjct: 425 SQRGLVGNT 433



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 123/248 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + DL  YGT++ GLC     + +  LL++M+   + AN VI  T++D+  K   
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L  EM    I   VVT+  LI+ LC  G   +A      M +  ++PNV  + A
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+  +  A  L +EM +R + PDT  Y  LI+G+  H    EA  +   M    
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y +L+ G  +C  +++   LF EM  RG++ + +   ++++  ++ G+ D A 
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453

Query: 241 ELQNEMMG 248
            +  +M+ 
Sbjct: 454 MVFKQMVS 461



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 1/227 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   IKA++ ++ TII  LC     E +  L +EM+  G+  N V   +L++     G 
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL  ML+ +I   VVTF  LID   K G + EA      M    + P+   Y  
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C  N ++ A+ +F  M  +D +P+   Y  LI+G+ K +  ++ + L   M++ G
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +  +   YT+++ G  + G    A+++F +M+   + P +I+  S+L
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV-PTDIMTYSIL 474



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 105/208 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ ++  Y ++I  LC   ++ D+  LLS M E  +  N V    L+DA+FK G+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L +EM+   I+   +T+ +LI+G C    + EA   F  M      PN+  Y  
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +E    LF EM +R ++ +T  YT +I G+ +      A  +  +M    
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  D+  Y+ L+ GL   G L  A V+F
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIF 491



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 125/246 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+    +++ G C   +  D+  L+ +M E G   +T   TTL+   F   + SEA++
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L+D+M+    +  +VT+  +++GLCK G +  A++   +M    +  NV ++  +ID LC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +E A +LF EM  + + P+   Y +LI+    +  + +A  L + M E  ++ ++ 
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + +L+    + G L EA  L  EMI R I PD I    L+        +DEA ++   M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389

Query: 247 MGRGLL 252
           + +  L
Sbjct: 390 VSKDCL 395



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 6/241 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   ++  Y T+I G C   + ED   L  EM + GL  NTV  TT++  +F+AG+
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  +M+ +R+   ++T+ +L+ GLC  G +  A+  F  +    +  N+ +Y  
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   +  A +LF  +  +   PD   Y  +I G       +EA +L  +M E G
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565

Query: 181 VDLDLNAYTSLVWG-LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
              +   Y +L+   L  C     A  L  EM   G + D    ISL+      G +D++
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAE-LIKEMRSSGFVGDAS-TISLVTNMLHDGRLDKS 623

Query: 240 I 240
            
Sbjct: 624 F 624



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  DL  Y   I   C  S+   +  +L++M + G   + V  ++L++ Y  +  
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A++L+D+M++   +    TF  LI GL       EA+    +M   G  P++  Y  
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK+  I+ A NL ++M    +  +   +  +ID   K+   + A++L   M   G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y SL+  L   G   +A  L   M+ + I P+ +   +L+   ++ G + EA 
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348

Query: 241 ELQNEMMGRGL 251
           +L  EM+ R +
Sbjct: 349 KLHEEMIQRSI 359



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 111/228 (48%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           +KFE    L  +M+  G++ +    +  ++ + +  + S AL++L +M+    E  +VT 
Sbjct: 97  NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 156

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             L++G C S  + +A+    +M + G  P+   +T LI GL   N    A  L D+M +
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           R   PD   Y  +++G  K      ALNL N+M    +  ++  + +++  L +  H++ 
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A  LF EM  +GI P+ +   SL+      G   +A  L + M+ + +
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 108/227 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +D+  L  +M ++    + V    L+ A  K  +    +SL ++M    I   + T+ 
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           + I+  C+   +  A+    +M   G  P++   ++L++G C    I  A  L D+M + 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PDT  +T LI G   H    EA+ L ++M + G   DL  Y ++V GL + G +  A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L ++M    I  + ++  +++    +  +++ A++L  EM  +G+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 125/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+     ++ GLC + +F ++  L  EM + G   N V   TL+D+  KAG   E LSLL
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   + + +VT+  L+D L K G   E  D         L PN   YT LID LCK 
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A  +  EM ++ + P+   ++++I+G++K     +A   K  M E G++ ++  Y
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G  +      A  ++H+M+  G+  ++ +  SL+    + G ++EA+ L  +  G
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 249 RGL 251
            GL
Sbjct: 513 SGL 515



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N+  D  +Y   I  LC+  KF+++K  L+EM+  GL  +     T++ ++ + GE ++
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA------------------------ 99
           AL LL EM  S I+  ++T+  L+ GL  +G V +A                        
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 100 -----------IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                      +D    M + GLH ++ VY  L+  LC      +A  + +EM    + P
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           DT  + ALI G+ K      A     +M    +  ++  + +L+ GL   G + EA  + 
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            EM   G+ P+ +    L   H ++ N  EA+ L  EM+G+G +
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFV 831



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 117/255 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K+I  ++  + ++I G       + +      MKE G+  N V   TL+D +FK   
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +ML   ++V       L++GL ++G + EA+  F      GL  +   YT 
Sbjct: 465 QDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGL K   +  A     E+  R+M+PD   Y   I+       FKEA +    M  +G
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMG 584

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D + Y +++    R G   +A  L HEM    I P+ I   +L+   +  G +++A 
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 241 ELQNEMMGRGLLSGS 255
            L NEM+  G    S
Sbjct: 645 YLLNEMVSAGFSPSS 659



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 10/256 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y T++ G C   + + ++ +L  MKE G+  N    T  +  Y +   
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L + M+ + + + VVT   L+ GLC+ G   EA   F  M   G  PN   Y  
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT 314

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH---ESFKEALN--LKNR 175
           LID L K    +   +L  EM  R ++ D   YTAL+D   K    +  K+ L   L + 
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           ++  GV      YT L+  L +  ++ EA  +  EM  + I P+ +   S++    +RG 
Sbjct: 375 LSPNGV-----TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 236 MDEAIELQNEMMGRGL 251
           +D+A E +  M  RG+
Sbjct: 430 LDKATEYKRMMKERGI 445



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 3/225 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVI-CTTLMDAYFKAGEPSEALSLLDEMLD 73
           T++ GLC   + + +  L    +  G+ A  VI   TL+  Y + G+   ALS+ D M  
Sbjct: 140 TLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTA 197

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             + + VV +  L+ G C++G V  A      M + G+ PNVA YT  I   C+   +E 
Sbjct: 198 QGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A +L++ M +  ++ D    +AL+ G  +   F EA  L   M +VG   +   Y +L+ 
Sbjct: 258 AFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLID 317

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            L++ G  +E   L  EM+ RG++ D +   +L+    ++G  DE
Sbjct: 318 SLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 11/234 (4%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD-----EMLDSRIEV 78
           S    +  +L+EM + G+  + V   TL+    + G+   A +L D       LD     
Sbjct: 114 SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALD----- 168

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
            V+ +  LI G C+ G    A+    RM   GL  +V  Y  L+ G C+   ++ AR + 
Sbjct: 169 -VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
           D M +  + P+   YT  I  Y + +  +EA +L   M   GV LD+   ++LV GL R 
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G   EA  LF EM   G  P+ +   +L+    + G   E + L  EM+ RG++
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 122/252 (48%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAG 59
           MK + I  ++  YGT+I G   + + +D+ L +  +M   G+  N  I  +L++   + G
Sbjct: 440 MKERGINPNVVTYGTLIDGF-FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNG 498

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  EA++L  +   S + +  V +  LIDGL K+G +  A  +   + D  + P+  VY 
Sbjct: 499 KIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYN 558

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             I+ LC     + A++   EM    + PD + Y  +I  + +     +AL L + M   
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            +  +L  Y +LV GL   G +++A+ L +EM+  G  P  +    +L+   +   +D  
Sbjct: 619 SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVI 678

Query: 240 IELQNEMMGRGL 251
           +++   MM  GL
Sbjct: 679 LDIHEWMMNAGL 690



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +K +  +  +++ GL    K E++  L  +   +GL+ + V  TTL+D  FKAG+   
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A     E++D  +    V + V I+ LC  G  +EA  +   M + GL P+ + Y  +I 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY----------------------- 160
             C+K    +A  L  EM    + P+   Y  L+ G                        
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657

Query: 161 --LKHESFKEA----------LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
             L H    +A          L++   M   G+  D+  Y +L+  L   G  ++A V+ 
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM+G GI PD I   +L+  H +  ++D A     +M+ + +
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 1/246 (0%)

Query: 2   KGKNIKA-DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +G  I A D+  + T+I G C       +  +   M   GL  + V   TL+  + +AG+
Sbjct: 160 RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +LD M ++ ++  V T+   I   C++  V EA D +  M   G+  +V   +A
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+      A  LF EM K    P+   Y  LID   K    KE L+L   M   G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V +DL  YT+L+  L + G   E +      +   + P+ +    L+    +  N+DEA 
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 241 ELQNEM 246
           ++  EM
Sbjct: 400 QVLLEM 405



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 116/281 (41%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL  Y  ++  L  + K ++ K  L     + L+ N V  T L+DA  KA  
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L EM +  I   VVTF  +I+G  K GL+ +A +Y   M + G++PNV  Y  
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 121 LIDG-----------------LC------------------KKNCIERARNLFDEMPKRD 145
           LIDG                 LC                  +   IE A  LF +     
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +  D   YT LIDG  K      A      + +  +  D   Y   +  L   G  +EA+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
               EM   G+ PD+    +++  H  +G   +A++L +EM
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 94/220 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    + AD+ +Y T++  LC       + ++L EM  +G+  +T+    L+  + K+  
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +   +ML   I   + TF  L+ GL   G + EA      M   GL PN   Y  
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L  G  K++    A  L+ EM  +  +P  + Y ALI  + K     +A  L   M + G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           V      Y  LV G SR  +  E +    +M  +G  P +
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSK 904



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 88/211 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D   +  +I G C  S  +++    ++M    ++ N     TL+      G 
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGR 779

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L EM  S +E   +T+ +L  G  K     EA+  +  M   G  P V+ Y A
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI    K   + +A+ LF +M KR + P +  Y  L+ G+ +  +  E       M E G
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
                   + +    S+ G   +A+ L   +
Sbjct: 900 FSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930


>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 418

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 110/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK ED+  L  EM  NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 120/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------EYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ +E
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKME 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMI 338



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 120/244 (49%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A L  +  ++     E +   ++ +   + + GL  + V   TLM+ Y K G+  E   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            + M  S ++  V T+ VLI+GLCK   + +A + F  M + GL PN   +T LIDG CK
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCK 253

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              ++ A  ++ +M  + + PD   Y  LI G  K    K+A +L + M+  G+  D   
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKIT 313

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+L+ G  + GHL+ A      MI   I  D++   +L+    + G   +A ++  EM+
Sbjct: 314 YTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 248 GRGL 251
             GL
Sbjct: 374 SVGL 377



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 104/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +I+ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    ++G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   +++A  LF EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 91/185 (49%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
             +E L+     ++  F +L+    K G +R A   F  +  +GL P+V  +  L++G  
Sbjct: 123 FYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   ++    L + M    + PD   Y+ LI+G  K    ++A  L + M   G+  +  
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGV 242

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302

Query: 247 MGRGL 251
             +GL
Sbjct: 303 SMKGL 307


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 114/235 (48%), Gaps = 1/235 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C E   E +  LL +M  +G+ A+ V   TLMD   KAG   EA  LL+ M 
Sbjct: 155 FNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S     VV +   + GLCKSG V +A     +M D    PNV  Y  ++DGLCK   I+
Sbjct: 215 ASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKID 274

Query: 133 RARNLFDEMPKRDMIP-DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            A  + ++M   D    +   Y+ ++DG  K    +EA ++   M   G   D+  Y+SL
Sbjct: 275 TALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           V GL + G ++EA     EM   G  P+ +   SL+      G + EA  +  EM
Sbjct: 335 VNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 6/217 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
           M+  +   ++  Y TI+ GLC   K + +  ++ +M   +G   N V  +T++D   K G
Sbjct: 248 MRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA S+++ M  +     VVT+  L++GLCK+G + EA++    M   G  PN   Y 
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMI-----PDTTAYTALIDGYLKHESFKEALNLKN 174
           +L+ GLC    +  A  + +EM           P  + Y ALI G  K     +AL    
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           RM   G D D  +Y+++V GL+R G   +A ++  E+
Sbjct: 428 RMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 123/248 (49%), Gaps = 2/248 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG--LTANTVICTTLMDAYFKA 58
           M  ++I+ ++  Y  ++ GLC   ++ +++ L+ +M   G   T + V  +TL+  Y KA
Sbjct: 36  MAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKA 95

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+  E+  LL E++   +    + +  ++  LCKS  + EA++    M   G  P +  +
Sbjct: 96  GKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITF 155

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             LI G C++  +E A +L  +M    +  D   Y  L+DG  K    +EA  L  RM  
Sbjct: 156 NTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA 215

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G   D+ AY+S V+GL + G + +A  +  +M      P+ +   ++L    + G +D 
Sbjct: 216 SGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDT 275

Query: 239 AIELQNEM 246
           A+E+  +M
Sbjct: 276 ALEMMEQM 283



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 124/285 (43%), Gaps = 36/285 (12%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G     D+  Y T++ G C   K E+S+ LL E+   GL  + ++ T ++ +  K+   
Sbjct: 74  RGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARL 133

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EAL LL+EM+ +    T++TF  LI G C+   +  A     +M   G+  +V  Y  L
Sbjct: 134 GEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTL 193

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI------------------------ 157
           +DGLCK   ++ A  L + M      PD  AY++ +                        
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHH 253

Query: 158 -----------DGYLKHESFKEALNLKNRMTEV-GVDLDLNAYTSLVWGLSRCGHLQEAR 205
                      DG  K      AL +  +M    G  L++  Y+++V GL + G  QEAR
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEAR 313

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +   M   G  PD +   SL+    + G ++EA+E   EM   G
Sbjct: 314 SVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 105/253 (41%), Gaps = 47/253 (18%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK--- 92
           M   G   N+V    L++ + K G P +   LL+ M    I+  VV++  L++GLCK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 93  ----SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                 LVR+ I   GR       P++  Y+ L+ G CK   +E +R L  E+  R + P
Sbjct: 61  WHEAEELVRDMISRGGRST-----PDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP 115

Query: 149 DTTAYT-----------------------------------ALIDGYLKHESFKEALNLK 173
           D   YT                                    LI G  + ++ + A +L 
Sbjct: 116 DALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLL 175

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
            +M   GV  D+  Y +L+ GL + G LQEA  L   M   G  PD +   S +    + 
Sbjct: 176 QKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235

Query: 234 GNMDEAIELQNEM 246
           G + +A ++  +M
Sbjct: 236 GKVLDAHQVLEQM 248



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 73/173 (42%), Gaps = 2/173 (1%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           VTF  L++G  K G   +       M    + PNV  Y  L++GLCK      A  L  +
Sbjct: 11  VTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRD 70

Query: 141 MPKRD--MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
           M  R     PD   Y+ L+ GY K    +E+  L   +   G+  D   YT +V  L + 
Sbjct: 71  MISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKS 130

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L EA  L  EMI  G  P  I   +L+       N++ A  L  +M   G+
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGV 183


>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 418

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 112/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A     +M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 122/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+  + + G+++ A E + +M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMI 338



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 118/221 (53%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + +M +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 119/244 (48%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A L  +  ++     E +   ++ +   + +  L  + V   TLM+ Y K G+  E   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            + M  S ++  V T+ VLI+GLCK   + +A + F  M D GL PN   +T LIDG CK
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              ++ A  ++ +M  + + PD   Y  LI G  K    K+A +L + M+  G+  D   
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+L+ G  + G L+ A     +MI   I  D++   +L+    + G   +A ++  EM+
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 248 GRGL 251
             GL
Sbjct: 374 SVGL 377



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 102/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 8/257 (3%)

Query: 3   GKNIKA-----DLPLYGTIIWGLCIES---KFEDSKLLLSEMKENGLTANTVICTTLMDA 54
            K+IKA      +  Y ++I G C +          +LL EM E G++   V    L++ 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 55  YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
           Y K    + A+ + +EM    I  +VVT+  LI GLC  G V E +     M D GL PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
              +  ++ G CKK  +  A +  D M +R++ PD   Y  LID Y +    ++A+ +K 
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M + G+  ++  Y  L+ G SR G  + A  L  EM  +GI  D +    L+     +G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 235 NMDEAIELQNEMMGRGL 251
            + +A++L +EM   GL
Sbjct: 454 EVRKAVKLLDEMSEVGL 470



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 120/234 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G +I G C  S    +  +  EMK+ G+ A+ V   +L+      G+  E + L++EM 
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +    +TF  ++ G CK G++ +A D+   M +  + P+V +Y  LID   +   +E
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 386

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + + M K+ + P+ T Y  LI G+ +   ++ A  L + M E G++ D+  Y  L+
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             L   G +++A  L  EM   G+ P+ +   ++++   ++GN+  A E++  M
Sbjct: 447 GALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 123/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I A +  Y ++I GLC E K E+   L+ EM++ GL+ N +    ++  + K G 
Sbjct: 290 MKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGM 349

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A   +D M +  +E  VV + +LID   + G + +A+     M   G+ PNV  Y  
Sbjct: 350 MADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNC 409

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  +      A  L DEM ++ +  D   Y  LI         ++A+ L + M+EVG
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +++ G    G+++ A  +   M       + +     +K   + G MDEA 
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAN 529

Query: 241 ELQNEMMGRGLL 252
           +L NEM+ + L+
Sbjct: 530 DLLNEMLDKCLV 541



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 3/183 (1%)

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L  R+   + TF  +I GLC+ G +R+A D    +  +GL P+VA Y +LIDG CKK   
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242

Query: 132 ERARN---LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
               +   L  EM +  + P    +  LI+GY K+ +   A+ +   M + G+   +  Y
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SL+ GL   G ++E   L  EM   G+ P+EI    +LK   ++G M +A +  + M  
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362

Query: 249 RGL 251
           R +
Sbjct: 363 RNV 365



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 77/162 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y  +I G      +  +  LL EMKE G+ A+ V    L+ A    GE
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LLDEM +  +E   +T+  +I G C  G ++ A +   RM       NV  Y  
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
            I   C+   ++ A +L +EM  + ++P+   Y  + +G ++
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 59/128 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I+AD+  Y  +I  LC + +   +  LL EM E GL  N +   T++  +   G 
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +   M   R    VVT+ V I   C+ G + EA D    M D  L PN   Y  
Sbjct: 490 IKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET 549

Query: 121 LIDGLCKK 128
           + +G+ +K
Sbjct: 550 IKEGMMEK 557


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 16/263 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y  +I  LC  +K E + LL  EMK  G+T +    T L+D++ KAG 
Sbjct: 448 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 507

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L +EM       TVVT+  LI    K+  V +A D F RM D G  PN   Y A
Sbjct: 508 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 567

Query: 121 LIDGLCKKNCIERARNLFDEM-------------PKRD---MIPDTTAYTALIDGYLKHE 164
           L+DGLCK   I +A  ++ ++             P  D   + P+   Y AL+DG  K  
Sbjct: 568 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 627

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
               A  L + M   G + +   Y +L+ G  + G +  A+ +F +M   G LP      
Sbjct: 628 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 687

Query: 225 SLLKKHYERGNMDEAIELQNEMM 247
           SL+ + ++ G +D A+++ ++M+
Sbjct: 688 SLIDRMFKDGRLDLAMKVLSQML 710



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 16/266 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D+  Y  +I   C     E ++ L  EM+  G +   V  T L+ AY KA +
Sbjct: 483 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 542

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--------PDF--- 109
             +A  +   M+D+      VT+  L+DGLCK+G + +A + + ++         DF   
Sbjct: 543 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 602

Query: 110 -----GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
                 L PNV  Y AL+DGLCK + ++ A  L D M      P+   Y ALIDG+ K  
Sbjct: 603 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 662

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
               A  +  +MT+ G    ++ YTSL+  + + G L  A  +  +M+     P+ +   
Sbjct: 663 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 722

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRG 250
           +++      G  ++A++L + M  +G
Sbjct: 723 AMIDGLCRIGESEKALKLLSLMEEKG 748



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 94/201 (46%), Gaps = 16/201 (7%)

Query: 13  YGTIIWGLC----IESKFE------------DSKLLLSEMKENGLTANTVICTTLMDAYF 56
           YG ++ GLC    I   FE            DS         + L  N V    L+D   
Sbjct: 565 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 624

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           KA +   A  LLD ML S  E   + +  LIDG CK+G +  A + F +M   G  P+V 
Sbjct: 625 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 684

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            YT+LID + K   ++ A  +  +M K    P+   YTA+IDG  +    ++AL L + M
Sbjct: 685 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 744

Query: 177 TEVGVDLDLNAYTSLVWGLSR 197
            E G   ++  YT+L+ GL +
Sbjct: 745 EEKGCSPNVVTYTALIDGLGQ 765



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 6/208 (2%)

Query: 12  LYGTIIWGLCIESKFEDSKLL------LSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +Y   I  +C + K     LL        EM       N V            G+  +A 
Sbjct: 383 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 442

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EM+         T+  +I  LC +  V +A   F  M   G+ P+V  YT LID  
Sbjct: 443 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 502

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   IE+A+ LF+EM      P    YTALI  YLK +   +A ++ +RM + G   + 
Sbjct: 503 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 562

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             Y +LV GL + G++ +A  ++ ++IG
Sbjct: 563 VTYGALVDGLCKAGNISKAFEVYAKLIG 590



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 8/244 (3%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD-- 69
           L+ +++   C E  +  +  LL+ M   G     V+    + +     E   +  LLD  
Sbjct: 348 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS-ICGQEKLPSPDLLDLA 406

Query: 70  -----EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
                EML +   +  V        LC  G   +A      M   G  P+ + Y+ +I  
Sbjct: 407 EKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 466

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC    +E+A  LF EM    + PD   YT LID + K    ++A  L   M  VG    
Sbjct: 467 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 526

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  YT+L+    +   + +A  +FH M+  G  P+++   +L+    + GN+ +A E+  
Sbjct: 527 VVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYA 586

Query: 245 EMMG 248
           +++G
Sbjct: 587 KLIG 590



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 60/114 (52%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K + ++ +  +M + G   +    T+L+D  FK G    A+ +L +M
Sbjct: 650 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 709

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           L       VVT+  +IDGLC+ G   +A+     M + G  PNV  YTALIDGL
Sbjct: 710 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 108/288 (37%), Gaps = 41/288 (14%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           ++ K D  L   +I GL   S F+++   L  M+ N    N V   TL+  + K  +   
Sbjct: 270 EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 329

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              +++ M+          F  L+   C       A     RM   G  P   VY   I 
Sbjct: 330 CKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG 389

Query: 124 GLCKK----------------------NCI-------------------ERARNLFDEMP 142
            +C +                      NC+                   ++A  L  EM 
Sbjct: 390 SICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 449

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           ++  +PDT+ Y+ +I         ++A  L   M  VGV  D+  YT L+    + G ++
Sbjct: 450 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 509

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +A+ LF EM   G  P  +   +L+  + +   + +A ++ + M+  G
Sbjct: 510 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 557



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 86/222 (38%), Gaps = 3/222 (1%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           ++  L   ++ G +        L DA    G   +A  LL E+ +   EV      VL+ 
Sbjct: 123 ARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVR 182

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
             C+ G+  EA++  GR+ DFG  P+   Y AL+  L     ++    +  EM +     
Sbjct: 183 RCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCM 242

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D            K   + +AL++  R       LD    T ++ GL    +  EA    
Sbjct: 243 DRFTVGCFAHALCKEGRWADALDMIERED---FKLDTVLCTHMISGLMEASYFDEAMSFL 299

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           H M     +P+ +   +LL    ++  +     + N MM  G
Sbjct: 300 HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 341



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 96/278 (34%), Gaps = 44/278 (15%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G     LC E ++ D+   L  ++      +TV+CT ++    +A    EA+S L  M  
Sbjct: 248 GCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRC 304

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
           +     VVT+  L+ G  K   +         M   G +PN +++ +L+   C +     
Sbjct: 305 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 364

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHE----------------------------- 164
           A  L + M      P    Y   I      E                             
Sbjct: 365 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 424

Query: 165 ------------SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
                        F +A  L   M   G   D + Y+ ++  L     +++A +LF EM 
Sbjct: 425 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 484

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             G+ PD      L+    + G +++A  L  EM   G
Sbjct: 485 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 522



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 93/261 (35%), Gaps = 44/261 (16%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           L  +K+ G   + V    L+     AG+      +  EM +S   +   T       LCK
Sbjct: 197 LGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCK 256

Query: 93  SGLVREAID-------------------------YFGRMPDFGLH--------PNVAVYT 119
            G   +A+D                         YF     F LH        PNV  Y 
Sbjct: 257 EGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSF-LHRMRCNSCIPNVVTYR 315

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+ G  KK  +   + + + M      P+ + + +L+  Y   + +  A  L NRMT  
Sbjct: 316 TLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTC 375

Query: 180 GVDLDLNAYTSLVWGLSRCGH--------LQEARVLFHEMIGRGILPDEILCISLLKKHY 231
           G       Y   +  +  CG         L  A  ++ EM+    + +++   +  +   
Sbjct: 376 GCPPGYVVYNIFIGSI--CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 433

Query: 232 ERGNMDEAIELQNEMMGRGLL 252
             G  D+A +L  EMM +G +
Sbjct: 434 GVGKFDKAFQLIKEMMRKGFV 454



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 95/242 (39%), Gaps = 3/242 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +   L  + +  D++ LL E+ E        +   L+    + G  +EAL  L  + 
Sbjct: 142 YDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLK 201

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D     + VT+  L+  L  +G V         M + G   +          LCK+    
Sbjct: 202 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEG--- 258

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           R  +  D + + D   DT   T +I G ++   F EA++  +RM       ++  Y +L+
Sbjct: 259 RWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 318

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   L   + + + M+  G  P+  L  SL+  +    +   A +L N M   G  
Sbjct: 319 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 378

Query: 253 SG 254
            G
Sbjct: 379 PG 380



 Score = 44.7 bits (104), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)

Query: 22  IESKFEDSKL-----LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           I+  F+D +L     +LS+M ++  T N V  T ++D   + GE  +AL LL  M +   
Sbjct: 690 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 749

Query: 77  EVTVVTFCVLIDGLCKS 93
              VVT+  LIDGL +S
Sbjct: 750 SPNVVTYTALIDGLGQS 766


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 16/263 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y  +I  LC  +K E + LL  EMK  G+T +    T L+D++ KAG 
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L +EM       TVVT+  LI    K+  V +A D F RM D G  PN   Y A
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398

Query: 121 LIDGLCKKNCIERARNLFDEM-------------PKRD---MIPDTTAYTALIDGYLKHE 164
           L+DGLCK   I +A  ++ ++             P  D   + P+   Y AL+DG  K  
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
               A  L + M   G + +   Y +L+ G  + G +  A+ +F +M   G LP      
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 518

Query: 225 SLLKKHYERGNMDEAIELQNEMM 247
           SL+ + ++ G +D A+++ ++M+
Sbjct: 519 SLIDRMFKDGRLDLAMKVLSQML 541



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 116/250 (46%), Gaps = 16/250 (6%)

Query: 13  YGTIIWGLC----IESKFE------------DSKLLLSEMKENGLTANTVICTTLMDAYF 56
           YG ++ GLC    I   FE            DS         + L  N V    L+D   
Sbjct: 396 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 455

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           KA +   A  LLD ML S  E   + +  LIDG CK+G +  A + F +M   G  P+V 
Sbjct: 456 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 515

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            YT+LID + K   ++ A  +  +M K    P+   YTA+IDG  +    ++AL L + M
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G   ++  YT+L+ GL + G +  +  LF +M  +G  P+ +    L+      G +
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 635

Query: 237 DEAIELQNEM 246
           D+A  L  EM
Sbjct: 636 DKARLLLGEM 645



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 128/301 (42%), Gaps = 51/301 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D+  Y  +I   C     E ++ L  EM+  G +   V  T L+ AY KA +
Sbjct: 314 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 373

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--------PDF--- 109
             +A  +   M+D+      VT+  L+DGLCK+G + +A + + ++         DF   
Sbjct: 374 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 433

Query: 110 ----------------------------------------GLHPNVAVYTALIDGLCKKN 129
                                                   G  PN  VY ALIDG CK  
Sbjct: 434 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 493

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I+ A+ +F +M K   +P    YT+LID   K      A+ + ++M +     ++  YT
Sbjct: 494 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 553

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +++ GL R G  ++A  L   M  +G  P+ +   +L+    + G +D +++L  +M  +
Sbjct: 554 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613

Query: 250 G 250
           G
Sbjct: 614 G 614



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 40/261 (15%)

Query: 22  IESKFEDSKL-----LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           I+  F+D +L     +LS+M ++  T N V  T ++D   + GE  +AL LL  M +   
Sbjct: 521 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 580

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR- 135
              VVT+  LIDGL K+G +  ++D F +M   G  PN   Y  LI+ LC    +++AR 
Sbjct: 581 SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARL 640

Query: 136 --------------------------------NLFDEMPKRDMIPDTTAYTALIDGYLKH 163
                                            + +EM     +P    Y  LID + K 
Sbjct: 641 LLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKA 700

Query: 164 ESFKEALNLKNRMTEV--GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
              + A+ L   M EV   V  D + Y SL+  L     ++EA  L+ EM  RG +P+  
Sbjct: 701 GRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELS 760

Query: 222 LCISLLKKHYERGNMDEAIEL 242
           + + L+K   E    DEA++L
Sbjct: 761 VFVCLIKGLVEVKKWDEALQL 781



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 2/236 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K + ++ +  +M + G   +    T+L+D  FK G    A+ +L +M
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L       VVT+  +IDGLC+ G   +A+     M + G  PNV  YTALIDGL K   I
Sbjct: 541 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 600

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + + +LF +M ++   P+   Y  LI+         +A  L   M +      L  Y   
Sbjct: 601 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 660

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + G S+      +  +  EM   G +P   +   L+    + G ++ A+EL  EMM
Sbjct: 661 IQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 714



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 6/208 (2%)

Query: 12  LYGTIIWGLCIESKFEDSKLL------LSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +Y   I  +C + K     LL        EM       N V            G+  +A 
Sbjct: 214 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 273

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EM+         T+  +I  LC +  V +A   F  M   G+ P+V  YT LID  
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 333

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   IE+A+ LF+EM      P    YTALI  YLK +   +A ++ +RM + G   + 
Sbjct: 334 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 393

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             Y +LV GL + G++ +A  ++ ++IG
Sbjct: 394 VTYGALVDGLCKAGNISKAFEVYAKLIG 421



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 8/244 (3%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD-- 69
           L+ +++   C E  +  +  LL+ M   G     V+    + +     E   +  LLD  
Sbjct: 179 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS-ICGQEKLPSPDLLDLA 237

Query: 70  -----EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
                EML +   +  V        LC  G   +A      M   G  P+ + Y+ +I  
Sbjct: 238 EKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 297

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC    +E+A  LF EM    + PD   YT LID + K    ++A  L   M  VG    
Sbjct: 298 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 357

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  YT+L+    +   + +A  +FH M+  G  P+++   +L+    + GN+ +A E+  
Sbjct: 358 VVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYA 417

Query: 245 EMMG 248
           +++G
Sbjct: 418 KLIG 421



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 108/288 (37%), Gaps = 41/288 (14%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           ++ K D  L   +I GL   S F+++   L  M+ N    N V   TL+  + K  +   
Sbjct: 101 EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 160

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              +++ M+          F  L+   C       A     RM   G  P   VY   I 
Sbjct: 161 CKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG 220

Query: 124 GLCKK----------------------NCI-------------------ERARNLFDEMP 142
            +C +                      NC+                   ++A  L  EM 
Sbjct: 221 SICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 280

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           ++  +PDT+ Y+ +I         ++A  L   M  VGV  D+  YT L+    + G ++
Sbjct: 281 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 340

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +A+ LF EM   G  P  +   +L+  + +   + +A ++ + M+  G
Sbjct: 341 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 4/188 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +   Y  +I  LC     + ++LLL EMK+             +  + K+  
Sbjct: 610 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI 669

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF--GLHPNVAVY 118
            S  L +L+EM           + +LID   K+G +  A++    M +    +  +  +Y
Sbjct: 670 AS--LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMY 727

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            +LI  LC  + +E A  L+ EM +R  +P+ + +  LI G ++ + + EAL L   +  
Sbjct: 728 ASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICH 787

Query: 179 VGVDLDLN 186
            GV+   N
Sbjct: 788 EGVNWQGN 795



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 96/278 (34%), Gaps = 44/278 (15%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G     LC E ++ D+   L  ++      +TV+CT ++    +A    EA+S L  M  
Sbjct: 79  GCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRC 135

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
           +     VVT+  L+ G  K   +         M   G +PN +++ +L+   C +     
Sbjct: 136 NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 195

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHE----------------------------- 164
           A  L + M      P    Y   I      E                             
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 255

Query: 165 ------------SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
                        F +A  L   M   G   D + Y+ ++  L     +++A +LF EM 
Sbjct: 256 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             G+ PD      L+    + G +++A  L  EM   G
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 353



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/258 (21%), Positives = 92/258 (35%), Gaps = 44/258 (17%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           +K+ G   + V    L+     AG+      +  EM +S   +   T       LCK G 
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 96  VREAID-------------------------YFGRMPDFGLH--------PNVAVYTALI 122
             +A+D                         YF     F LH        PNV  Y  L+
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSF-LHRMRCNSCIPNVVTYRTLL 149

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G  KK  +   + + + M      P+ + + +L+  Y   + +  A  L NRMT  G  
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 209

Query: 183 LDLNAYTSLVWGLSRCGH--------LQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
                Y   +  +  CG         L  A  ++ EM+    + +++   +  +     G
Sbjct: 210 PGYVVYNIFIGSI--CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVG 267

Query: 235 NMDEAIELQNEMMGRGLL 252
             D+A +L  EMM +G +
Sbjct: 268 KFDKAFQLIKEMMRKGFV 285


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I   +  Y  +I GL    + E +++   EM+  GL  + +   +L++ Y KAG 
Sbjct: 334 MENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGS 393

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L  ++  + +  TV+T+ +LIDG C+ G + EA      M + G  P+V  YT 
Sbjct: 394 LKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTI 453

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G      +  AR  FDEM  + + PD  AY   I   L   +  +A  L+  M   G
Sbjct: 454 LMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEG 513

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  L+ GL + G+L +A+ L  +M+  G+ PD I    L+  H ERG + EA 
Sbjct: 514 ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 241 ELQNEMMGRGL 251
           +   +M+  GL
Sbjct: 574 KFFKDMISDGL 584



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 105/223 (47%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           ++    EM   GL  +     T + A    G  ++A  L + M+   I    VT+ +LID
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILID 526

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           GLCK+G + +A D   +M   GL P+   YT LI   C++  +  AR  F +M    + P
Sbjct: 527 GLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAP 586

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
               YT  I  Y +  +   A     +M E GV+ +   Y  L+  L R G  Q A   F
Sbjct: 587 SAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHF 646

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           HEM+ RG++P++     L+  + + GN ++A+    EM   G+
Sbjct: 647 HEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGI 689



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 114/245 (46%), Gaps = 9/245 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEM----KENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +  +I GL  +   E++  ++  M    K +  T N +I   L   + K     +A  L 
Sbjct: 277 HNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVK-----KADDLQ 331

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM +  I  TVVT+  +I GL +SG V  A   F  M   GL P+V  Y +L++G CK 
Sbjct: 332 LEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKA 391

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  LF ++    + P    Y  LIDGY +    +EA  LK  M E G   D+  Y
Sbjct: 392 GSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTY 451

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T L+ G      L  AR  F EM+ +G+ PD     + ++     G + +A  L+  MM 
Sbjct: 452 TILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMML 511

Query: 249 RGLLS 253
            G+ S
Sbjct: 512 EGISS 516



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 1/201 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I +D   Y  +I GLC      D+K L  +M  NGL  + +  T L+ A+ + G   E
Sbjct: 512 EGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLRE 571

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A     +M+   +  + VT+ V I   C+ G +  A  +F +M + G+ PN   Y  LI 
Sbjct: 572 ARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 631

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LC+    + A   F EM +R ++P+   YT LIDG  K  ++++A+     M + G+  
Sbjct: 632 ALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHP 691

Query: 184 DLNAYTSLVWGLSRCGHLQEA 204
           D   + +L  G    GH+  A
Sbjct: 692 DYLTHKALFKGFDE-GHMNHA 711



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 127/287 (44%), Gaps = 36/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+     ++  L   ++++D   + +EM + G+  + V   TL+D++ K G 
Sbjct: 193 MASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGR 252

Query: 61  PSEALSLLDEM-------LDSRIEVTVV-----------------------------TFC 84
             +   LL EM       L + +   VV                             T+ 
Sbjct: 253 NDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYN 312

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            LI GL   G V++A D    M + G+ P V  Y A+I GL +   +E A+  F EM   
Sbjct: 313 PLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAM 372

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   Y +L++GY K  S KEAL L   +   G+   +  Y  L+ G  R G L+EA
Sbjct: 373 GLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEA 432

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           R L  EM+ +G LPD      L+K  +   ++  A E  +EM+ +GL
Sbjct: 433 RRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGL 479



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 2/249 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y T I           +  L   M   G++++TV    L+D   K G 
Sbjct: 474 MLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGN 533

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L  +M+ + ++   +T+  LI   C+ GL+REA  +F  M   GL P+   YT 
Sbjct: 534 LNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTV 593

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I   C++  +  A   F +M +  + P+   Y  LI    +    + A    + M E G
Sbjct: 594 FIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERG 653

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT L+ G  + G+ ++A   + EM   GI PD +   +L K  ++ G+M+ AI
Sbjct: 654 LVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKG-FDEGHMNHAI 712

Query: 241 E-LQNEMMG 248
           E L+N ++G
Sbjct: 713 EYLENAVLG 721



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 3/221 (1%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
             EM  +G+  +   C  ++     A    +  ++  EML   IE ++VT+  L+D   K
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 93  SGLVREAIDYFGRMPD--FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
            G   +       M     G  PN   +  +I GL +K  +E A  + + M +      +
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKKASS 308

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LI G L     K+A +L+  M   G+   +  Y +++ GL + G ++ A+V F E
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M   G+ PD I   SLL  + + G++ EA+ L  ++   GL
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGL 409


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 125/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+     ++ GLC + +F ++  L  EM + G   N V   TL+D+  KAG   E LSLL
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   + + +VT+  L+D L K G   E  D         L PN   YT LID LCK 
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A  +  EM ++ + P+   ++++I+G++K     +A   K  M E G++ ++  Y
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G  +      A  ++H+M+  G+  ++ +  SL+    + G ++EA+ L  +  G
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 249 RGL 251
            GL
Sbjct: 513 SGL 515



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N+  D  +Y   I  LC+  KF+++K  L+EM+  GL  +     T++ ++ + GE ++
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA------------------------ 99
           AL LL EM  S I+  ++T+  L+ GL  +G V +A                        
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 100 -----------IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                      +D    M + GLH ++ VY  L+  LC      +A  + +EM    + P
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           DT  + ALI G+ K      A     +M    +  ++  + +L+ GL   G + EA  + 
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            EM   G+ P+ +    L   H ++ N  EA+ L  EM+G+G +
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFV 831



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 117/255 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K+I  ++  + ++I G       + +      MKE G+  N V   TL+D +FK   
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +ML   ++V       L++GL ++G + EA+  F      GL  +   YT 
Sbjct: 465 QDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGL K   +  A     E+  R+M+PD   Y   I+       FKEA +    M  +G
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMG 584

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D + Y +++    R G   +A  L HEM    I P+ I   +L+   +  G +++A 
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 241 ELQNEMMGRGLLSGS 255
            L NEM+  G    S
Sbjct: 645 YLLNEMVSAGFSPSS 659



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 10/256 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y T++ G C   + + ++ +L  MKE G+  N    T  +  Y +   
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L + M+ + + + VVT   L+ GLC+ G   EA   F  M   G  PN   Y  
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT 314

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH---ESFKEALN--LKNR 175
           LID L K    +   +L  EM  R ++ D   YTAL+D   K    +  K+ L   L + 
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           ++  GV      YT L+  L +  ++ EA  +  EM  + I P+ +   S++    +RG 
Sbjct: 375 LSPNGV-----TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 236 MDEAIELQNEMMGRGL 251
           +D+A E +  M  RG+
Sbjct: 430 LDKATEYKRMMKERGI 445



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 122/252 (48%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAG 59
           MK + I  ++  YGT+I G   + + +D+ L +  +M   G+  N  I  +L++   + G
Sbjct: 440 MKERGINPNVVTYGTLIDGF-FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNG 498

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  EA++L  +   S + +  V +  LIDGL K+G +  A  +   + D  + P+  VY 
Sbjct: 499 KIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYN 558

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             I+ LC     + A++   EM    + PD + Y  +I  + +     +AL L + M   
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            +  +L  Y +LV GL   G +++A+ L +EM+  G  P  +    +L+   +   +D  
Sbjct: 619 SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVI 678

Query: 240 IELQNEMMGRGL 251
           +++   MM  GL
Sbjct: 679 LDIHEWMMNAGL 690



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +K +  +  +++ GL    K E++  L  +   +GL+ + V  TTL+D  FKAG+   
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A     E++D  +    V + V I+ LC  G  +EA  +   M + GL P+ + Y  +I 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY----------------------- 160
             C+K    +A  L  EM    + P+   Y  L+ G                        
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657

Query: 161 --LKHESFKEA----------LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
             L H    +A          L++   M   G+  D+  Y +L+  L   G  ++A V+ 
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM+G GI PD I   +L+  H +  ++D A     +M+ + +
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 116/281 (41%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL  Y  ++  L  + K ++ K  L     + L+ N V  T L+DA  KA  
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L EM +  I   VVTF  +I+G  K GL+ +A +Y   M + G++PNV  Y  
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 121 LIDG-----------------LC------------------KKNCIERARNLFDEMPKRD 145
           LIDG                 LC                  +   IE A  LF +     
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +  D   YT LIDG  K      A      + +  +  D   Y   +  L   G  +EA+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
               EM   G+ PD+    +++  H  +G   +A++L +EM
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 3/224 (1%)

Query: 26  FEDSKLLLS---EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           F D+   LS    M   GL  + V   TL+  + +AG+   A  +LD M ++ ++  V T
Sbjct: 182 FGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVAT 241

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           +   I   C++  V EA D +  M   G+  +V   +AL+ GLC+      A  LF EM 
Sbjct: 242 YTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMD 301

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           K    P+   Y  LID   K    KE L+L   M   GV +DL  YT+L+  L + G   
Sbjct: 302 KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTD 361

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           E +      +   + P+ +    L+    +  N+DEA ++  EM
Sbjct: 362 EVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 94/220 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    + AD+ +Y T++  LC       + ++L EM  +G+  +T+    L+  + K+  
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +   +ML   I   + TF  L+ GL   G + EA      M   GL PN   Y  
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L  G  K++    A  L+ EM  +  +P  + Y ALI  + K     +A  L   M + G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           V      Y  LV G SR  +  E +    +M  +G  P +
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSK 904



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 34/225 (15%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR------------------------ 97
           + A ++L EM    +    VT   L+ GLC++G V                         
Sbjct: 117 AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSL 176

Query: 98  ----------EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
                      A+    RM   GL  +V  Y  L+ G C+   ++ AR + D M +  + 
Sbjct: 177 LDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVD 236

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
           P+   YT  I  Y + +  +EA +L   M   GV LD+   ++LV GL R G   EA  L
Sbjct: 237 PNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYAL 296

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           F EM   G  P+ +   +L+    + G   E + L  EM+ RG++
Sbjct: 297 FREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 88/211 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D   +  +I G C  S  +++    ++M    ++ N     TL+      G 
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGR 779

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L EM  S +E   +T+ +L  G  K     EA+  +  M   G  P V+ Y A
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI    K   + +A+ LF +M KR + P +  Y  L+ G+ +  +  E       M E G
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
                   + +    S+ G   +A+ L   +
Sbjct: 900 FSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 125/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+     ++ GLC + +F ++  L  EM + G   N V   TL+D+  KAG   E LSLL
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   + + +VT+  L+D L K G   E  D         L PN   YT LID LCK 
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A  +  EM ++ + P+   ++++I+G++K     +A   K  M E G++ ++  Y
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G  +      A  ++H+M+  G+  ++ +  SL+    + G ++EA+ L  +  G
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 249 RGL 251
            GL
Sbjct: 513 SGL 515



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N+  D  +Y   I  LC+  KF+++K  L+EM+  GL  +     T++ ++ + GE ++
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA------------------------ 99
           AL LL EM  S I+  ++T+  L+ GL  +G V +A                        
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 100 -----------IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                      +D    M + GLH ++ VY  L+  LC      +A  + +EM    + P
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           DT  + ALI G+ K      A     +M    +  ++  + +L+ GL   G + EA  + 
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            EM   G+ P+ +    L   H ++ N  EA+ L  EM+G+G +
Sbjct: 788 IEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFV 831



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 117/255 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K+I  ++  + ++I G       + +      MKE G+  N V   TL+D +FK   
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +ML   ++V       L++GL ++G + EA+  F      GL  +   YT 
Sbjct: 465 QDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGL K   +  A     E+  R+M+PD   Y   I+       FKEA +    M  +G
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMG 584

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D + Y +++    R G   +A  L HEM    I P+ I   +L+   +  G +++A 
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 241 ELQNEMMGRGLLSGS 255
            L NEM+  G    S
Sbjct: 645 YLLNEMVSAGFSPSS 659



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 10/256 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y T++ G C   + + ++ +L  MKE G+  N    T  +  Y +   
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L + M+ + + + VVT   L+ GLC+ G   EA   F  M   G  PN   Y  
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCT 314

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA-----LNLKNR 175
           LID L K    +   +L  EM  R ++ D   YTAL+D   K     E        L + 
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           ++  GV      YT L+  L +  ++ EA  +  EM  + I P+ +   S++    +RG 
Sbjct: 375 LSPNGV-----TYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 236 MDEAIELQNEMMGRGL 251
           +D+A E +  M  RG+
Sbjct: 430 LDKATEYKRMMKERGI 445



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 3/225 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVI-CTTLMDAYFKAGEPSEALSLLDEMLD 73
           T++ GLC   + + +  L    +  G+ A  VI   TL+  Y + G+   ALS+ D M  
Sbjct: 140 TLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTA 197

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             + + VV +  L+ G C++G V  A      M + G+ PNVA YT  I   C+   +E 
Sbjct: 198 QGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A +L++ M +  ++ D    +AL+ G  +   F EA  L   M +VG   +   Y +L+ 
Sbjct: 258 AFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLID 317

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            L++ G  +E   L  EM+ RG++ D +   +L+    ++G  DE
Sbjct: 318 SLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 122/252 (48%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAG 59
           MK + I  ++  YGT+I G   + + +D+ L +  +M   G+  N  I  +L++   + G
Sbjct: 440 MKERGINPNVVTYGTLIDGF-FKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNG 498

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  EA++L  +   S + +  V +  LIDGL K+G +  A  +   + D  + P+  VY 
Sbjct: 499 KIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYN 558

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             I+ LC     + A++   EM    + PD + Y  +I  + +     +AL L + M   
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            +  +L  Y +LV GL   G +++A+ L +EM+  G  P  +    +L+   +   +D  
Sbjct: 619 SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVI 678

Query: 240 IELQNEMMGRGL 251
           +++   MM  GL
Sbjct: 679 LDIHEWMMNAGL 690



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +K +  +  +++ GL    K E++  L  +   +GL+ + V  TTL+D  FKAG+   
Sbjct: 478 EGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPT 537

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A     E++D  +    V + V I+ LC  G  +EA  +   M + GL P+ + Y  +I 
Sbjct: 538 AFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY----------------------- 160
             C+K    +A  L  EM    + P+   Y  L+ G                        
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657

Query: 161 --LKHESFKEA----------LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
             L H    +A          L++   M   G+  D+  Y +L+  L   G  ++A V+ 
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM+G GI PD I   +L+  H +  ++D A     +M+ + +
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNI 760



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 11/234 (4%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD-----EMLDSRIEV 78
           S    +  +L+EM + G+  + V   TL+    + G+   A +L D       LD     
Sbjct: 114 SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALD----- 168

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
            V+ +  LI G C+ G    A+    RM   GL  +V  Y  L+ G C+   ++ AR + 
Sbjct: 169 -VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
           D M +  + P+   YT  I  Y + +  +EA +L   M   GV LD+   ++LV GL R 
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G   EA  LF EM   G  P+ +   +L+    + G   E + L  EM+ RG++
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 1/246 (0%)

Query: 2   KGKNIKA-DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +G  I A D+  + T+I G C       +  +   M   GL  + V   TL+  + +AG+
Sbjct: 160 RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQ 219

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +LD M ++ ++  V T+   I   C++  V EA D +  M   G+  +V   +A
Sbjct: 220 VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+      A  LF EM K    P+   Y  LID   K    KE L+L   M   G
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRG 339

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V +DL  YT+L+  L + G   E +      +   + P+ +    L+    +  N+DEA 
Sbjct: 340 VVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAE 399

Query: 241 ELQNEM 246
           ++  EM
Sbjct: 400 QVLLEM 405



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 116/281 (41%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL  Y  ++  L  + K ++ K  L     + L+ N V  T L+DA  KA  
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L EM +  I   VVTF  +I+G  K GL+ +A +Y   M + G++PNV  Y  
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 121 LIDG-----------------LC------------------KKNCIERARNLFDEMPKRD 145
           LIDG                 LC                  +   IE A  LF +     
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +  D   YT LIDG  K      A      + +  +  D   Y   +  L   G  +EA+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAK 574

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
               EM   G+ PD+    +++  H  +G   +A++L +EM
Sbjct: 575 SFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 106/253 (41%), Gaps = 35/253 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM------------------------ 36
           MK  +IK +L  Y T++ GL      E +K LL+EM                        
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674

Query: 37  -----------KENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                         GL A+  +  TL+      G   +A  +L+EML S I    +TF  
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G CKS  +  A   + +M    + PN+A +  L+ GL     I  A  +  EM K  
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSG 794

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+   Y  L  G+ K  +  EA+ L   M   G    ++ Y +L+   ++ G + +A+
Sbjct: 795 LEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAK 854

Query: 206 VLFHEMIGRGILP 218
            LF +M  RG+ P
Sbjct: 855 ELFKDMQKRGVHP 867



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 83/194 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    + AD+ +Y T++  LC       + ++L EM  +G+  +T+    L+  + K+  
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +   +ML   I   + TF  L+ GL   G + EA      M   GL PN   Y  
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L  G  K++    A  L+ EM  +  +P  + Y ALI  + K     +A  L   M + G
Sbjct: 805 LATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 181 VDLDLNAYTSLVWG 194
           V      Y  LV G
Sbjct: 865 VHPTSCTYDILVSG 878



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 72/160 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D   +  +I G C  S  +++    ++M    ++ N     TL+      G 
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGR 779

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L EM  S +E   +T+ +L  G  K     EA+  +  M   G  P V+ Y A
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           LI    K   + +A+ LF +M KR + P +  Y  L+ G+
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 125/263 (47%), Gaps = 16/263 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y  +I  LC  +K E + LL  EMK  G+T +    T L+D++ KAG 
Sbjct: 214 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 273

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L +EM       TVVT+  LI    K+  V +A D F RM D G  PN   Y A
Sbjct: 274 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 333

Query: 121 LIDGLCKKNCIERARNLFDEM-------------PKRD---MIPDTTAYTALIDGYLKHE 164
           L+DGLCK   I +A  ++ ++             P  D   + P+   Y AL+DG  K  
Sbjct: 334 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 393

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
               A  L + M   G + +   Y +L+ G  + G +  A+ +F +M   G LP      
Sbjct: 394 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 453

Query: 225 SLLKKHYERGNMDEAIELQNEMM 247
           SL+ + ++ G +D A+++ ++M+
Sbjct: 454 SLIDRMFKDGRLDLAMKVLSQML 476



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 116/250 (46%), Gaps = 16/250 (6%)

Query: 13  YGTIIWGLC----IESKFE------------DSKLLLSEMKENGLTANTVICTTLMDAYF 56
           YG ++ GLC    I   FE            DS         + L  N V    L+D   
Sbjct: 331 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 390

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           KA +   A  LLD ML S  E   + +  LIDG CK+G +  A + F +M   G  P+V 
Sbjct: 391 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 450

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            YT+LID + K   ++ A  +  +M K    P+   YTA+IDG  +    ++AL L + M
Sbjct: 451 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 510

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G   ++  YT+L+ GL + G +  +  LF +M  +G  P+ +    L+      G +
Sbjct: 511 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 570

Query: 237 DEAIELQNEM 246
           D+A  L  EM
Sbjct: 571 DKARLLLGEM 580



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 128/301 (42%), Gaps = 51/301 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D+  Y  +I   C     E ++ L  EM+  G +   V  T L+ AY KA +
Sbjct: 249 MKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ 308

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--------PDF--- 109
             +A  +   M+D+      VT+  L+DGLCK+G + +A + + ++         DF   
Sbjct: 309 VPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFP 368

Query: 110 ----------------------------------------GLHPNVAVYTALIDGLCKKN 129
                                                   G  PN  VY ALIDG CK  
Sbjct: 369 CEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAG 428

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I+ A+ +F +M K   +P    YT+LID   K      A+ + ++M +     ++  YT
Sbjct: 429 KIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT 488

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +++ GL R G  ++A  L   M  +G  P+ +   +L+    + G +D +++L  +M  +
Sbjct: 489 AMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 548

Query: 250 G 250
           G
Sbjct: 549 G 549



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 40/261 (15%)

Query: 22  IESKFEDSKL-----LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           I+  F+D +L     +LS+M ++  T N V  T ++D   + GE  +AL LL  M +   
Sbjct: 456 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGC 515

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR- 135
              VVT+  LIDGL K+G +  ++D F +M   G  PN   Y  LI+ LC    +++AR 
Sbjct: 516 SPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARL 575

Query: 136 --------------------------------NLFDEMPKRDMIPDTTAYTALIDGYLKH 163
                                            + +EM     +P    Y  LID + K 
Sbjct: 576 LLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKA 635

Query: 164 ESFKEALNLKNRMTEV--GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
              + A+ L   M EV   V  D + Y SL+  L     ++EA  L+ EM  RG +P+  
Sbjct: 636 GRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELS 695

Query: 222 LCISLLKKHYERGNMDEAIEL 242
           + + L+K   E    DEA++L
Sbjct: 696 VFVCLIKGLVEVKKWDEALQL 716



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 2/236 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K + ++ +  +M + G   +    T+L+D  FK G    A+ +L +M
Sbjct: 416 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 475

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L       VVT+  +IDGLC+ G   +A+     M + G  PNV  YTALIDGL K   I
Sbjct: 476 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKI 535

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + + +LF +M ++   P+   Y  LI+         +A  L   M +      L  Y   
Sbjct: 536 DLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCA 595

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + G S+      +  +  EM   G +P   +   L+    + G ++ A+EL  EMM
Sbjct: 596 IQGFSK--SFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM 649



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 6/208 (2%)

Query: 12  LYGTIIWGLCIESKFEDSKLL------LSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +Y   I  +C + K     LL        EM       N V            G+  +A 
Sbjct: 149 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 208

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EM+         T+  +I  LC +  V +A   F  M   G+ P+V  YT LID  
Sbjct: 209 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 268

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   IE+A+ LF+EM      P    YTALI  YLK +   +A ++ +RM + G   + 
Sbjct: 269 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 328

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             Y +LV GL + G++ +A  ++ ++IG
Sbjct: 329 VTYGALVDGLCKAGNISKAFEVYAKLIG 356



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 8/244 (3%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD-- 69
           L+ +++   C E  +  +  LL+ M   G     V+    + +     E   +  LLD  
Sbjct: 114 LFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGS-ICGQEKLPSPDLLDLA 172

Query: 70  -----EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
                EML +   +  V        LC  G   +A      M   G  P+ + Y+ +I  
Sbjct: 173 EKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 232

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC    +E+A  LF EM    + PD   YT LID + K    ++A  L   M  VG    
Sbjct: 233 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 292

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  YT+L+    +   + +A  +FH M+  G  P+++   +L+    + GN+ +A E+  
Sbjct: 293 VVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYA 352

Query: 245 EMMG 248
           +++G
Sbjct: 353 KLIG 356



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/288 (21%), Positives = 108/288 (37%), Gaps = 41/288 (14%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           ++ K D  L   +I GL   S F+++   L  M+ N    N V   TL+  + K  +   
Sbjct: 36  EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 95

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              +++ M+          F  L+   C       A     RM   G  P   VY   I 
Sbjct: 96  CKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG 155

Query: 124 GLCKK----------------------NCI-------------------ERARNLFDEMP 142
            +C +                      NC+                   ++A  L  EM 
Sbjct: 156 SICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 215

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           ++  +PDT+ Y+ +I         ++A  L   M  VGV  D+  YT L+    + G ++
Sbjct: 216 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 275

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +A+ LF EM   G  P  +   +L+  + +   + +A ++ + M+  G
Sbjct: 276 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 323



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 4/188 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +   Y  +I  LC     + ++LLL EMK+             +  + K+  
Sbjct: 545 MSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFI 604

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF--GLHPNVAVY 118
            S  L +L+EM           + +LID   K+G +  A++    M +    +  +  +Y
Sbjct: 605 AS--LGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMY 662

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            +LI  LC  + +E A  L+ EM +R  +P+ + +  LI G ++ + + EAL L   +  
Sbjct: 663 ASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICH 722

Query: 179 VGVDLDLN 186
            GV+   N
Sbjct: 723 EGVNWQGN 730



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/278 (20%), Positives = 96/278 (34%), Gaps = 44/278 (15%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G     LC E ++ D+   L  ++      +TV+CT ++    +A    EA+S L  M  
Sbjct: 14  GCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRC 70

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
           +     VVT+  L+ G  K   +         M   G +PN +++ +L+   C +     
Sbjct: 71  NSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAY 130

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHE----------------------------- 164
           A  L + M      P    Y   I      E                             
Sbjct: 131 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVN 190

Query: 165 ------------SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
                        F +A  L   M   G   D + Y+ ++  L     +++A +LF EM 
Sbjct: 191 VANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 250

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             G+ PD      L+    + G +++A  L  EM   G
Sbjct: 251 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVG 288


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 8/257 (3%)

Query: 3   GKNIKA-----DLPLYGTIIWGLCIES---KFEDSKLLLSEMKENGLTANTVICTTLMDA 54
            K+IKA      +  Y ++I G C +          +LL EM E G++   V    L++ 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 55  YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
           Y K    + A+ + +EM    I  +VVT+  LI GLC  G V E +     M D GL PN
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
              +  ++ G CKK  +  A +  D M +R++ PD   Y  LID Y +    ++A+ +K 
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M + G+  ++  Y  L+ G SR G  + A  L  EM  +GI  D +    L+     +G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 235 NMDEAIELQNEMMGRGL 251
            + +A++L +EM   GL
Sbjct: 454 EVRKAVKLLDEMSEVGL 470



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 120/234 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G +I G C  S    +  +  EMK+ G+ A+ V   +L+      G+  E + L++EM 
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +    +TF  ++ G CK G++ +A D+   M +  + P+V +Y  LID   +   +E
Sbjct: 327 DLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKME 386

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + + M K+ + P+ T Y  LI G+ +   ++ A  L + M E G++ D+  Y  L+
Sbjct: 387 DAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLI 446

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             L   G +++A  L  EM   G+ P+ +   ++++   ++GN+  A E++  M
Sbjct: 447 GALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 123/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I A +  Y ++I GLC E K E+   L+ EM++ GL+ N +    ++  + K G 
Sbjct: 290 MKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGM 349

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A   +D M +  +E  VV + +LID   + G + +A+     M   G+ PNV  Y  
Sbjct: 350 MADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNC 409

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  +      A  L DEM ++ +  D   Y  LI         ++A+ L + M+EVG
Sbjct: 410 LITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +++ G    G+++ A  +   M       + +     +K   + G MDEA 
Sbjct: 470 LEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEAN 529

Query: 241 ELQNEMMGRGLL 252
           +L NEM+ + L+
Sbjct: 530 DLLNEMLDKCLV 541



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 3/183 (1%)

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L  R+   + TF  +I GLC+ G +R+A D    +  +GL P+VA Y +LIDG CKK   
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242

Query: 132 ERARN---LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
               +   L  EM +  + P    +  LI+GY K+ +   A+ +   M + G+   +  Y
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTY 302

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SL+ GL   G ++E   L  EM   G+ P+EI    +LK   ++G M +A +  + M  
Sbjct: 303 NSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTE 362

Query: 249 RGL 251
           R +
Sbjct: 363 RNV 365



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 77/162 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y  +I G      +  +  LL EMKE G+ A+ V    L+ A    GE
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LLDEM +  +E   +T+  +I G C  G ++ A +   RM       NV  Y  
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
            I   C+   ++ A +L +EM  + ++P+   Y  + +G ++
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMME 556



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 59/128 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I+AD+  Y  +I  LC + +   +  LL EM E GL  N +   T++  +   G 
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +   M   R    VVT+ V I   C+ G + EA D    M D  L PN   Y  
Sbjct: 490 IKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET 549

Query: 121 LIDGLCKK 128
           + +G+ +K
Sbjct: 550 IKEGMMEK 557


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 2/244 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKF-EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           + I+ D+ +Y +I+ GLC  ++F E  K L   M   G +   V  T+L+    KA +  
Sbjct: 196 RRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMK 255

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A+ + + ML+ +I+ T+V++ V+IDGL K+G V +A      M   G   NV +YT LI
Sbjct: 256 LAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLI 315

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK   ++ A  L+  M +    P+   Y  LID + +++  + AL L + + +    
Sbjct: 316 DGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CP 374

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           LD+  YT++V GL R   L +AR LF EM   G+  D      LL   +     +EA  +
Sbjct: 375 LDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRI 434

Query: 243 QNEM 246
             E+
Sbjct: 435 LEEL 438



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 123/252 (48%), Gaps = 6/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+  +  Y  II GL    +  D+  ++ EM+  G   N VI TTL+D   K+G 
Sbjct: 264 MLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGF 323

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +L   M  S       T+  LID  C++     A+  F  + D+    +VA+YTA
Sbjct: 324 LDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDY-CPLDVAMYTA 382

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           ++ GLC++  ++ AR LF EM    +  DT AY  L+ G  + E  +EA  +   +  + 
Sbjct: 383 VVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDP 442

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   +L  Y +++ G      L+   VLF+EM  RGI PD     +L+ +    G +  A
Sbjct: 443 GCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRA 498

Query: 240 IELQNEMMGRGL 251
            +L  EM+  GL
Sbjct: 499 FDLCEEMLASGL 510



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 101/222 (45%), Gaps = 4/222 (1%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV-TVVTFCVLIDGL 90
            L E    G      + + ++D   K+G+   AL +L  ML S         F  LID L
Sbjct: 46  FLREKTAAGSIFPGFLSSVVIDRACKSGDLRGALLILATMLHSGTPPPNQHAFASLIDAL 105

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI-PD 149
            KS  + +A      M D G+HP+V  +T +I G CK   +ERA  +F EM K +   PD
Sbjct: 106 SKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPD 165

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQEA-RVL 207
              Y  LIDGY K      AL L   M  E  +  D+  Y S+V GL R     EA + L
Sbjct: 166 CFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFL 225

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
              M+ +G  P  +   SL++   +   M  A+ + N M+ R
Sbjct: 226 DETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLER 267



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 11/187 (5%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +Y  ++ GLC E + +D++ L  EM+  G++A+T     L+   F++  P EA  +L
Sbjct: 376 DVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRIL 435

Query: 69  DEMLDSRIEVT-VVTFCVLIDGLC-KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +E+ D    V  ++T+  +I G C +SG+V      F  M   G+ P+ A Y+ALID L 
Sbjct: 436 EELGDDPGCVANLLTYNTVIAGCCLESGMV-----LFYEMRQRGIAPDFATYSALIDRLL 490

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
               I RA +L +EM    + P     + ++   +    +    +L  ++ E+ + +D  
Sbjct: 491 GSGEIGRAFDLCEEMLASGLSPP----SGVLGRVVARLCWSRRGDLAAKVIEMAMAVDDT 546

Query: 187 AYTSLVW 193
           A  SL W
Sbjct: 547 ASFSLPW 553


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 120/249 (48%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G N   D+  Y T+I G   E     +  L  +M ++G+  N V C +++D   K     
Sbjct: 114 GDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD 173

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A ++L +M+D  I     T+  LI G   SG   EA+     M   G  PNV  Y  LI
Sbjct: 174 KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLI 233

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK      AR +F+ M +    PD T Y +L+ GY    +  E  N+K+ M + G+ 
Sbjct: 234 DCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMR 293

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            + + ++  ++   +CG L EA + F +M   G +PD +   +++    + G +D+A+  
Sbjct: 294 SNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSR 353

Query: 243 QNEMMGRGL 251
             +M+  GL
Sbjct: 354 FCQMIDDGL 362



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 3/251 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++AD   +  ++  LC + +  D+  ++L  M E G T +    +TL+       +  EA
Sbjct: 44  LRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEA 103

Query: 65  LSLLDEMLDS--RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
             L+  M +        VV++  +I G  K G V +A   F +M D G+ PNV    ++I
Sbjct: 104 AELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVI 163

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK   +++A  +  +M    ++P+ T Y +LI GYL    + EA+ +   M+  G  
Sbjct: 164 DGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQR 223

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y  L+  L + G   EAR +F+ MI  G  PD     SLL  +   GN+ E   +
Sbjct: 224 PNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNV 283

Query: 243 QNEMMGRGLLS 253
           ++ M+  G+ S
Sbjct: 284 KDLMVQNGMRS 294



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 117/263 (44%), Gaps = 19/263 (7%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D   YG+++ G   E    +   +   M +NG+ +N    +  + AY K G   EA  
Sbjct: 258 KPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASL 317

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
              +M        +VT+  +IDGLCK G + +A+  F +M D GL PN+  +T LI G  
Sbjct: 318 TFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFS 377

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                E+A  LF EM  R + PD T +TA+ID   K     EA  L + M   G   ++ 
Sbjct: 378 MYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVV 437

Query: 187 AYTSLVWGLSRCGHLQEA-------------------RVLFHEMIGRGILPDEILCISLL 227
           +Y +++ G    G + E                      L   M+  G+ PD   C +L+
Sbjct: 438 SYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLI 497

Query: 228 KKHYERGNMDEAIELQNEMMGRG 250
               E G +++ + L  EM+G+ 
Sbjct: 498 DSCCEDGRIEDILTLFREMLGKA 520



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 35/271 (12%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++I GLC     + ++ +L +M +  +  N     +L+  Y  +G+ +EA+ +L EM   
Sbjct: 161 SVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRD 220

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG---------- 124
                VVT+ +LID LCKSG   EA + F  M   G  P+   Y +L+ G          
Sbjct: 221 GQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEM 280

Query: 125 -------------------------LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
                                     CK   ++ A   F +M +   +PD   YT +IDG
Sbjct: 281 NNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDG 340

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K     +A++   +M + G+  ++  +T+L+ G S  G  ++A  LF+EM+ RGI PD
Sbjct: 341 LCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPD 400

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +  +++ + ++ G + EA +L + M   G
Sbjct: 401 VTIFTAMIDRLFKEGKVTEAQKLFDLMPRAG 431



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 19/224 (8%)

Query: 17  IWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           I+  C   + +++ L   +M++ G   + V  TT++D   K G   +A+S   +M+D  +
Sbjct: 303 IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 362

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
              ++TF  LI G    G   +A + F  M D G+ P+V ++TA+ID L K+  +  A+ 
Sbjct: 363 SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQK 422

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL- 195
           LFD MP+    P+  +Y  +I GY       E + L + M  +G+      + +L+ G+ 
Sbjct: 423 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 482

Query: 196 ----------------SRC--GHLQEARVLFHEMIGRGILPDEI 221
                           S C  G +++   LF EM+G+    D I
Sbjct: 483 SMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTI 526



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 121/245 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  Y  +I  LC      +++ + + M ++G   +     +L+  Y   G   E  +
Sbjct: 223 RPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNN 282

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           + D M+ + +     TF + I   CK G + EA   F +M   G  P++  YT +IDGLC
Sbjct: 283 VKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLC 342

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   ++ A + F +M    + P+   +T LI G+  +  +++A  L   M + G+  D+ 
Sbjct: 343 KIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVT 402

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +T+++  L + G + EA+ LF  M   G  P+ +   +++  ++  G + E ++L ++M
Sbjct: 403 IFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 462

Query: 247 MGRGL 251
           +  GL
Sbjct: 463 LLIGL 467



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 3/176 (1%)

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
           ++   + TF +LI   C +G +       G++   GL  +   +T L+  LC K     A
Sbjct: 8   KVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDA 67

Query: 135 RNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL--DLNAYTSL 191
            N+    MP+    PD  +Y+ L+ G    +  +EA  L + M E G +   D+ +Y+++
Sbjct: 68  MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTV 127

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + G  + G + +A  LF +M+  GI P+ + C S++    +   MD+A  +  +M+
Sbjct: 128 IHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMI 183



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 63/141 (44%), Gaps = 16/141 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+ ++  +I  L  E K  +++ L   M   G   N V   T++  YF AGE
Sbjct: 392 MMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGE 451

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + LLD+ML   ++ T VTF  L+DG                M   GL P+V     
Sbjct: 452 VGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVDTCKT 495

Query: 121 LIDGLCKKNCIERARNLFDEM 141
           LID  C+   IE    LF EM
Sbjct: 496 LIDSCCEDGRIEDILTLFREM 516


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+ +Y TII G+C E   E +  +LS M   GL  N V   T++     A  
Sbjct: 257 MAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADR 316

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL EM      +  VTF +L+D  C++GLV   I+   +M + G  P+V  YT 
Sbjct: 317 WEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTT 376

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK+  I+ A  L   MP     P+T +YT ++ G    E + +A  L +RM + G
Sbjct: 377 VINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQG 436

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + +++  L + G +++A  L  +M+  G  PD I   +++    + G  +EA+
Sbjct: 437 CLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEAL 496

Query: 241 ELQNEMMGRGL 251
           EL N M+ +G+
Sbjct: 497 ELLNVMINKGI 507



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 123/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ G+C   ++E ++ LL+EM +     + V    L+D + + G 
Sbjct: 292 MPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGL 351

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL++ML+      V+T+  +I+G CK GL+ EA+     MP  G  PN   YT 
Sbjct: 352 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTI 411

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC       A  L   M ++  +P+   +  +I+   K    ++A+ L  +M   G
Sbjct: 412 VLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG 471

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + DL +Y++++ GL + G  +EA  L + MI +GI P+ I   S+       G +D+ I
Sbjct: 472 CNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVI 531

Query: 241 EL 242
           ++
Sbjct: 532 QM 533



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 102/202 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC   ++ D++ L+S M + G   N V   T+++   K G   +A+ LL +ML
Sbjct: 409 YTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQML 468

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +     ++++  +IDGL K+G   EA++    M + G+ PNV  Y+++   L ++  I+
Sbjct: 469 VNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRID 528

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +   +FD +    +  D   Y A+I    K      A++    M   G   + + YT+L+
Sbjct: 529 KVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALI 588

Query: 193 WGLSRCGHLQEARVLFHEMIGR 214
            GL+  G L EA+ L  E+  R
Sbjct: 589 KGLASEGLLCEAQDLLSELCSR 610



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 10/254 (3%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLL----------LSEMKENGLTANTVICTTLMDAYF 56
           +AD+  Y  ++ GLC   ++ D + L          LS+M ++G T +  +  T++D   
Sbjct: 218 EADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGIC 277

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           K G    A  +L  M    ++  VV +  ++ G+C +    +A +    M       +  
Sbjct: 278 KEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDV 337

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +  L+D  C+   ++R   L ++M +   +PD   YT +I+G+ K     EA+ L   M
Sbjct: 338 TFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNM 397

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              G   +  +YT ++ GL       +A  L   MI +G LP+ +   +++    ++G +
Sbjct: 398 PSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLV 457

Query: 237 DEAIELQNEMMGRG 250
           ++AIEL  +M+  G
Sbjct: 458 EQAIELLKQMLVNG 471



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 110/241 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NT+  T ++          +A  L+
Sbjct: 370 DVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELM 429

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M+        VTF  +I+ LCK GLV +AI+   +M   G +P++  Y+ +IDGL K 
Sbjct: 430 SRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKA 489

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              E A  L + M  + + P+   Y+++     +     + + + + + +  +  D   Y
Sbjct: 490 GKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLY 549

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L +      A      M+  G +P+E    +L+K     G + EA +L +E+  
Sbjct: 550 NAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCS 609

Query: 249 R 249
           R
Sbjct: 610 R 610



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/247 (19%), Positives = 97/247 (39%), Gaps = 16/247 (6%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            +I  LC+  +  D+   +  +   G  A  V    ++  Y + G+   A  L   +   
Sbjct: 57  ALIRSLCVAGRTADA---VRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV--- 110

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +     T+  ++ GLC  G + +A+     M      P   +Y  +I+  C+      A
Sbjct: 111 PVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSA 170

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             + + +  +    DT     +I+         E L +  ++   G + D+ +Y +++ G
Sbjct: 171 LRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKG 230

Query: 195 L---SRCGHLQE---ARVLFHE----MIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           L    R G ++E     V  HE    M   G  PD  +  +++    + G+ + A E+ +
Sbjct: 231 LCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILS 290

Query: 245 EMMGRGL 251
            M   GL
Sbjct: 291 RMPSYGL 297


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 127/285 (44%), Gaps = 37/285 (12%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G++   +   Y T+I G C     E +  LL+EMKE G + + V  ++++ A    G  S
Sbjct: 98  GQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLS 157

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A+    E ++   +   V F +L+ GLCK+  + EA      M + G+ P+V  Y +LI
Sbjct: 158 RAMQYFRESVECAPD--SVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLI 215

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK   +E AR L + M KR + P+   Y  LI GY K      A  L  RM + G  
Sbjct: 216 DGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTH 275

Query: 183 LD-----------------------------------LNAYTSLVWGLSRCGHLQEARVL 207
            D                                   L  Y  L+ GL   G   EA  L
Sbjct: 276 PDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACEL 335

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             EM GRGILPD I   SL+        +++A ++QN M+ RG++
Sbjct: 336 LSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVI 380



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 8/248 (3%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  L+  ++ GLC  ++  +++ ++ EM E G+  + V   +L+D   K+    EA  LL
Sbjct: 172 DSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLL 231

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M+  ++   +VT+  LI G CK+G    A     RM   G HP+V  + +LI G C+K
Sbjct: 232 ETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQK 291

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + I++A  +   M K    P+   Y  LI G        EA  L + M   G+  D+  Y
Sbjct: 292 SKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITY 351

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI----LCISLLKKHYERGNMDEAIELQN 244
            SL+    R   +++A  + + M+ RG++PD I    L ++LLK   ER   DEA  L +
Sbjct: 352 NSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKS--ER--FDEAFALLD 407

Query: 245 EMMGRGLL 252
            M   G +
Sbjct: 408 NMFDAGAI 415



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 110/242 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y ++I GLC   + E+++ LL  M +  +  N V   TL+  Y K G 
Sbjct: 199 MSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGC 258

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L++ M+ S     VVTF  LI G C+   + +A +    M      PN+  Y  
Sbjct: 259 TGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNV 318

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC       A  L  EM  R ++PD   Y +LI  + ++   ++A  ++N M E G
Sbjct: 319 LISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D  +Y +L   L +     EA  L   M   G +P+     SL++       +DEA 
Sbjct: 379 VIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEAR 438

Query: 241 EL 242
            L
Sbjct: 439 HL 440



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 8/255 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ +L  Y T+I+G C       +  L+  M ++G   + V   +L+  + +  +
Sbjct: 234 MVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSK 293

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +L  M        +VT+ VLI GLC +G   EA +    M   G+ P++  Y +
Sbjct: 294 IDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNS 353

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C+   IE+A  + + M +R +IPD  +Y  L    LK E F EA  L + M + G
Sbjct: 354 LIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAG 413

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNM 236
              +L  + SL+ GL     L EAR L   M   G  P     E+L   L K     G +
Sbjct: 414 AIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKA----GRV 469

Query: 237 DEAIELQNEMMGRGL 251
           D+A E+   M+  G+
Sbjct: 470 DDAKEVLVMMVSEGI 484



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 105/244 (43%), Gaps = 35/244 (14%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLL-DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           N   C  L+    KA    +A  +  DE+L    +   +T+  LI G CK+G +  A   
Sbjct: 68  NNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQL 127

Query: 103 FGRMPDFGLHPNVAVYTA---------------------------------LIDGLCKKN 129
              M + G  P+V  +++                                 L+ GLCK N
Sbjct: 128 LAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKAN 187

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +  AR + +EM +R ++PD   Y +LIDG  K    +EA  L   M +  V  +L  Y 
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +L++G  + G    A  L   MI  G  PD +   SL+    ++  +D+A E+ + +M +
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLH-LMKK 306

Query: 250 GLLS 253
           GL +
Sbjct: 307 GLCA 310



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 94/210 (44%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + ++I G C +SK + +  +L  MK+     N V    L+     AG  +EA  LL
Sbjct: 277 DVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELL 336

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM    I   ++T+  LI   C++  + +A      M + G+ P+   Y  L   L K 
Sbjct: 337 SEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKS 396

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + A  L D M     IP+   + +L++G        EA +L   M  VG D   + Y
Sbjct: 397 ERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTY 456

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
             LV GL + G + +A+ +   M+  GI P
Sbjct: 457 EVLVTGLCKAGRVDDAKEVLVMMVSEGIQP 486



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 96/213 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      +L  Y  +I GLC   +  ++  LLSEM   G+  + +   +L+  + +  +
Sbjct: 304 MKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQ 363

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + + M++  +    +++C L   L KS    EA      M D G  PN+  + +
Sbjct: 364 IEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNS 423

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++GLC    ++ AR+L   M +    P  + Y  L+ G  K     +A  +   M   G
Sbjct: 424 LMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEG 483

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           +   +++  ++V  L+R G    A   F +++ 
Sbjct: 484 IQPLVSSSGTIVHTLAREGKQDLALHYFDQVVA 516



 Score = 46.2 bits (108), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 35/193 (18%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ I  D+  Y ++I   C   + E +  + + M E G+  + +   TL  A  K+  
Sbjct: 339 MDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSER 398

Query: 61  PSEALSLLDEMLDSRIEVTVVTF---------------------------C--------V 85
             EA +LLD M D+     + TF                           C        V
Sbjct: 399 FDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEV 458

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L+ GLCK+G V +A +    M   G+ P V+    ++  L ++   + A + FD++   +
Sbjct: 459 LVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAE 518

Query: 146 MIPDTTAYTALID 158
                 +Y  L++
Sbjct: 519 SKACDPSYQKLLE 531


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  122 bits (307), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 122/234 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GL        +  L  E   NG T +    TT++D   K  +  EA++L++++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +    T+ T+  L++GLCK G + EAID   ++ D G  P+V  YT+LIDGL KK    
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM  R +  DT  YTALI G L+     +A ++   MT  G   D+   ++++
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL + G +  A  +F  M  RG+ P+E++  +L+    +   MD A+E+  +M
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 235



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 116/252 (46%), Gaps = 3/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+    T+I GLC   +   +  +   M+  GL  N V+ + L+    KA +
Sbjct: 165 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 224

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +L +M  +      +T+ +LIDGLCKSG V  A  +F  M + G  P+V  Y  
Sbjct: 225 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNI 284

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK    + A  +FD+M      P+   Y  LI G  K     +A      M E G
Sbjct: 285 LISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERG 344

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEA 239
              D   Y+SLV GL + G L+   +LF EM   G+   +    + L  H  + N +DEA
Sbjct: 345 CPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTR--TRLIFHLCKANRVDEA 402

Query: 240 IELQNEMMGRGL 251
           + L N +   G+
Sbjct: 403 VSLFNAIRKEGM 414



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 112/242 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I GL  + +  ++  L  EM   GL  +TV  T L+    +AG+  +A S+ 
Sbjct: 103 DVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVY 162

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M        VVT   +IDGLCK+G +  A+  F  M   GL PN  VY+ALI GLCK 
Sbjct: 163 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 222

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  +  +M K    PDT  Y  LIDG  K      A    + M E G   D+  Y
Sbjct: 223 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTY 282

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+ G  + G+   A  +F +M      P+ +   +L+    +R  + +A      M  
Sbjct: 283 NILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKE 342

Query: 249 RG 250
           RG
Sbjct: 343 RG 344



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 111/237 (46%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           +  Y  ++ GLC   + E++  LL ++ +NG T + V  T+L+D   K     EA  L  
Sbjct: 69  IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFK 128

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM    + +  V +  LI GL ++G + +A   +  M   G  P+V   + +IDGLCK  
Sbjct: 129 EMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAG 188

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I  A  +F  M  R + P+   Y+ALI G  K      AL +  +M +     D   Y 
Sbjct: 189 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 248

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            L+ GL + G +  AR  F EM+  G  PD      L+    + GN D A  + ++M
Sbjct: 249 ILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 305



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 103/203 (50%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           + L++   KAG   +A SL  E   +   + + T+  ++D L K+  ++EA+    ++  
Sbjct: 3   SILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITA 62

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            G  P +A Y AL++GLCK   +E A +L  ++      PD   YT+LIDG  K +   E
Sbjct: 63  NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFE 122

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A  L   M   G+ LD   YT+L+ GL + G + +A  ++  M  +G +PD +   +++ 
Sbjct: 123 AYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 182

Query: 229 KHYERGNMDEAIELQNEMMGRGL 251
              + G +  A+ +   M  RGL
Sbjct: 183 GLCKAGRIGAAVRIFKSMEARGL 205



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 67/135 (49%)

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            ++ LI+GL K   + +A +L  E        D   YT ++D   K++  +EA+ L  ++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
           T  G    +  Y +L+ GL + G L+EA  L  +++  G  PD +   SL+    ++   
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 237 DEAIELQNEMMGRGL 251
            EA +L  EM  RGL
Sbjct: 121 FEAYKLFKEMASRGL 135


>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 418

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 116/250 (46%), Gaps = 35/250 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK  D+  L  EM  NGL  N V              
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGV-------------- 242

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                                TF  LIDG CK+G +  A++ +  M   G  P++  Y  
Sbjct: 243 ---------------------TFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNT 281

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCKK  +++A++L DEM  + + PD   YT LIDG  K    + AL  + RM +  
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKEN 341

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD  AYT+L+ GL R G   +A  +  EM+  G+ PD      ++ +  ++G++    
Sbjct: 342 IRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGS 401

Query: 241 ELQNEMMGRG 250
           +L  EM   G
Sbjct: 402 KLLKEMQRDG 411



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G  A+      LM  + K GE   A S+ DE+ 
Sbjct: 116 YFKLVWGF------------YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  + G + E       M   G+ P+V  Y+ LI+GLCK++ + 
Sbjct: 164 KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMN 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM    ++P+   +T LIDG+ K  S   A+     M   G   DL  Y +L+
Sbjct: 224 DANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+    + G+++ A+  +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMI 338



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 105/209 (50%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +AL       + +  V   T   +++   K    +    +
Sbjct: 64  SDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK+  +  A+++FDE+ K  + P   ++  L++GY++
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIR 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   GV  D+  Y+ L+ GL +   + +A  LF EMIG G++P+ + 
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G++D A+E   EM+ +G 
Sbjct: 244 FTTLIDGHCKTGSIDLAMETYKEMLRQGF 272



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 94/204 (46%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  +++ + K            E+L+     ++  F +L+   CK G +R A   F  + 
Sbjct: 104 CRKVLEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEIT 163

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
            +GL P+V  +  L++G  +   ++    L   M    + PD   Y+ LI+G  K     
Sbjct: 164 KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMN 223

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A  L   M   G+  +   +T+L+ G  + G +  A   + EM+ +G  PD I   +L+
Sbjct: 224 DANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLI 283

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
               ++G++ +A +L +EM  +GL
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGL 307


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 5/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVIC-TTLMDAYFKA 58
           M+   +K ++  Y T+I GLC     E ++ LL EM ++ G +A  ++   TL++A+++A
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
               EA +  ++M  + I   V+T  +L+ G+CK G V EA++    M   G  P+V  Y
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            ++I  LC    +  A  +   M      PD   +  L+DG+ K      AL +   M  
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             +  D+  YT LV GL R G +Q A  L  E++ +G +PD I   SL+    + G ++E
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 359

Query: 239 AIELQNEMMGRGLLSG 254
           A +L  EM  RG  +G
Sbjct: 360 AHKLVKEMSVRGCRTG 375



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 124/250 (49%), Gaps = 3/250 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      D+  Y +II  LC+  K  ++  +L  M     + + V   TL+D + KAG 
Sbjct: 230 MKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGM 286

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +L+EM    I   V+T+ +L++GLC+ G V+ A      +   G  P+V  YT+
Sbjct: 287 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 346

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   IE A  L  EM  R        Y++L+ GY +  +  +A  +   M  + 
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSIN 406

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   L  Y  ++ GL + G + +A  L  +++ RG +PD +   +L+    +   + EA 
Sbjct: 407 MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREAC 466

Query: 241 ELQNEMMGRG 250
           +L +EM  RG
Sbjct: 467 DLADEMASRG 476



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 110/219 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  +  + +Y +++ G C       ++ +L+EM    +         ++    K G 
Sbjct: 367 MSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGS 426

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A+SL+ +++       VVT+  LIDGLCK+  VREA D    M   G  PN     +
Sbjct: 427 ISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGS 486

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC+   ++ A +L  EM ++   P+   YT+LIDG  K +   +A  + + M   G
Sbjct: 487 VVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQG 546

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V LD  AY  L+  +S  G + EA  ++ EM+ RG LPD
Sbjct: 547 VALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPD 585



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 122/244 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y +++ GLC   + E++  L+ EM   G     V+ ++L+  Y +AG   +A  +L
Sbjct: 340 DVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREIL 399

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   +   + T+ +++ GL K G + +A+     +   G  P+V  Y  LIDGLCK 
Sbjct: 400 AEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKA 459

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +  A +L DEM  R   P+     +++ G  +     +A +L   M+      ++  Y
Sbjct: 460 NRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVY 519

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           TSL+ GL +   + +A ++   M G+G+  D+     L+      G + EA+ + +EM+ 
Sbjct: 520 TSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVA 579

Query: 249 RGLL 252
           RG L
Sbjct: 580 RGFL 583



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 119/246 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K  +   DL  + T++ G C       +  +L EM    +  + +  T L++   + G+
Sbjct: 262 LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ 321

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL+E++       V+ +  L+DGLCKSG + EA      M   G    V +Y++
Sbjct: 322 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSS 381

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+   + +AR +  EM   +M+P    Y  ++ G +K  S  +A++L + +   G
Sbjct: 382 LVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 441

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +L+ GL +   ++EA  L  EM  RG  P+++   S++      G +D+A 
Sbjct: 442 YVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAW 501

Query: 241 ELQNEM 246
            L  EM
Sbjct: 502 SLVVEM 507



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 2/214 (0%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           ++  +G + N V    L+    KAG+   AL  L  + +  +   V  F VLI GL K G
Sbjct: 52  DLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDG 111

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR--DMIPDTTA 152
              +A+  F  M    + P +  Y  +I GLCK   +E+AR L +EM ++     PD   
Sbjct: 112 NPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVT 171

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y  LI+ + +    +EA   + +M   G++ D+     LV G+ + G ++EA  +   M 
Sbjct: 172 YNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMK 231

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             G +PD I   S++      G + EA E+   M
Sbjct: 232 LAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM 265



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 2/198 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+D   K+G       +  ++L S     +VTF +LI G CK+G    A+++   + +F 
Sbjct: 33  LLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFS 92

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+V ++  LI GL K    ++A  LF+ M    + P+   Y  +I G  K  + ++A 
Sbjct: 93  VAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKAR 152

Query: 171 NLKNRMTEVG--VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
            L   M   G     D+  Y +L+    R   ++EA     +M   GI PD + C  L+ 
Sbjct: 153 ELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVS 212

Query: 229 KHYERGNMDEAIELQNEM 246
              + G+++EA+E+ + M
Sbjct: 213 GICKDGDVEEALEILDGM 230



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 72/159 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GLC  ++  ++  L  EM   G   N V   +++    + G   +A SL+
Sbjct: 445 DVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLV 504

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM   R    VV +  LIDGLCKS  + +A      M   G+  +   Y  LI  +   
Sbjct: 505 VEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHG 564

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
             +  A  ++DEM  R  +PD +    L +  + +  F+
Sbjct: 565 GRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSNSVFE 603



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G   +V  Y  L+D L K     R   ++ ++      P+   +  LI G  K      A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           L     + E  V  D+  +  L+ GL + G+  +A  LF  M    + P+ +   +++  
Sbjct: 82  LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141

Query: 230 HYERGNMDEAIELQNEMMGRG 250
             + GN+++A EL  EM+ +G
Sbjct: 142 LCKSGNLEKARELLEEMIRKG 162


>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 418

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 129/248 (52%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +++  +  + T++ G       ++   L + M+ +G+  +    + L++   K  +  +A
Sbjct: 166 SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             L DEM+D+ +    VTF  LIDG CK+G V  A++ + +M    L P++  Y  LI G
Sbjct: 226 NELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCKK  +++A++L DEM  + + PD   YT LIDG  K    + A   + RM +  + LD
Sbjct: 286 LCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLD 345

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
             AYT+L+ GL + G   +A  +  EM+  G+ P+      ++ +  ++G++    +L  
Sbjct: 346 DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLK 405

Query: 245 EMMGRGLL 252
           EM   G +
Sbjct: 406 EMQRDGYM 413



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 102/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EMI  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 98/215 (45%)

Query: 37  KENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV 96
           KE+        C  +++   K           +E L+     ++  F +L+    K G +
Sbjct: 93  KEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEI 152

Query: 97  REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
           R A   F  +  + L P+V  +  L++G  K   ++    L + M    + PD   Y+ L
Sbjct: 153 RLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVL 212

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           I+G  K     +A  L + M + G+  +   +T+L+ G  + G +  A  ++ +M+ + +
Sbjct: 213 INGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            PD I   +L+    ++G++ +A +L +EM  +GL
Sbjct: 273 SPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGL 307


>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 418

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM  + ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EMI +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 110/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM + GL  N V  TTL+D + K G 
Sbjct: 197 MQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 117/221 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD  +    VTF  LIDG C
Sbjct: 193 LKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 103/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+ +G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 124/264 (46%), Gaps = 17/264 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y  +I  LC  SK E +  L  EMK NG+T +    TTL+D + K G 
Sbjct: 113 MMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGL 172

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A +  DEM        VVT+  LI    K+  +  A + F  M   G  PN+  YTA
Sbjct: 173 IEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTA 232

Query: 121 LIDGLCKKNCIERARNLFDEM-------PKRDMI----------PDTTAYTALIDGYLKH 163
           LIDG CK    E+A  ++  M       P  D+           P+   Y AL+DG  K 
Sbjct: 233 LIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKA 292

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
              KEA +L   M+  G + +   Y +L+ G  + G L EA+ +F +M+G G  P+    
Sbjct: 293 HKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTY 352

Query: 224 ISLLKKHYERGNMDEAIELQNEMM 247
            SL+ K ++   +D A+++  +M+
Sbjct: 353 SSLIDKLFKDKRLDLALKVLTKML 376



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 118/248 (47%), Gaps = 17/248 (6%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           LC   KFE +  ++ EM   G   ++   + ++     A +  +A  L  EM  + I   
Sbjct: 97  LCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPD 156

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V T+  L+D  CK GL+ +A ++F  M   G  PNV  YTALI    K   + RA  +F+
Sbjct: 157 VYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFE 216

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL---------------- 183
            M     +P+   YTALIDG+ K    ++A  +  RM    VD+                
Sbjct: 217 MMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE 276

Query: 184 -DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +LV GL +   ++EAR L   M   G  P++I+  +L+    + G +DEA E+
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336

Query: 243 QNEMMGRG 250
             +M+G G
Sbjct: 337 FTKMLGHG 344



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 119/267 (44%), Gaps = 17/267 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      ++  Y  +I       K   +  +   M  NG   N V  T L+D + KAGE
Sbjct: 183 MQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGE 242

Query: 61  PSEALSLLDEMLDSRIEV-----------------TVVTFCVLIDGLCKSGLVREAIDYF 103
             +A  +   M + ++++                  VVT+  L+DGLCK+  V+EA D  
Sbjct: 243 TEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLL 302

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
             M   G  PN  +Y ALIDG CK   ++ A+ +F +M      P+   Y++LID   K 
Sbjct: 303 ETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKD 362

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
           +    AL +  +M E     ++  YT +V GL + G   EA  L   M  +G  P+ +  
Sbjct: 363 KRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTY 422

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRG 250
            +++    + G +D  +EL   M  +G
Sbjct: 423 TAMIDGFGKAGRVDRCLELLQLMTSKG 449



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 92/199 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG ++ GLC   K ++++ LL  M   G   N +I   L+D + K G+  EA  +  +ML
Sbjct: 282 YGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML 341

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  V T+  LID L K   +  A+    +M +    PNV +YT ++DGLCK    +
Sbjct: 342 GHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTD 401

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M ++   P+   YTA+IDG+ K       L L   MT  G   +   Y  L+
Sbjct: 402 EAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLI 461

Query: 193 WGLSRCGHLQEARVLFHEM 211
                 G L +A  L  EM
Sbjct: 462 NHCCAAGLLDDAHKLLEEM 480



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 4/217 (1%)

Query: 30  KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG 89
           +++ SE+KE     N V    L+D   KA +  EA  LL+ M     E   + +  LIDG
Sbjct: 268 RIVDSELKE----PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDG 323

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
            CK G + EA + F +M   G  PNV  Y++LID L K   ++ A  +  +M +    P+
Sbjct: 324 FCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPN 383

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              YT ++DG  K     EA  L   M E G   ++  YT+++ G  + G +     L  
Sbjct: 384 VVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQ 443

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            M  +G  P+ I    L+      G +D+A +L  EM
Sbjct: 444 LMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEM 480



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 2/235 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K ++++ + ++M  +G + N    ++L+D  FK      AL +L +M
Sbjct: 316 IYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKM 375

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L++     VV +  ++DGLCK G   EA      M + G +PNV  YTA+IDG  K   +
Sbjct: 376 LENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRV 435

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +R   L   M  +   P+   Y  LI+         +A  L   M +      +  Y  +
Sbjct: 436 DRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKV 495

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           + G S       +  L  E+   G +P   +   L+    + G ++ A+EL  E+
Sbjct: 496 IEGFSH--EFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEEL 548



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 3/238 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y  ++ GLC   K +++  L+  M+E G   N V  T ++D + KAG     L LL
Sbjct: 383 NVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELL 442

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M         +T+ VLI+  C +GL+ +A      M       ++ +Y  +I+G   +
Sbjct: 443 QLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHE 502

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                +  L  E+ +   +P    Y  LID ++K    + AL L   ++        N Y
Sbjct: 503 --FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ-NTY 559

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            SL+  L+    + +A  L+ +M  RG +P+  + + L+K     G  +EA++L + +
Sbjct: 560 VSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSI 617



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 85/178 (47%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EML+  + +  V  C     LC  G   +A +    M   G  P+ + Y+ +I  LC  
Sbjct: 76  NEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNA 135

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + +E+A  LF EM +  + PD   YT L+D + K    ++A N  + M + G   ++  Y
Sbjct: 136 SKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTY 195

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           T+L+    +   L  A  +F  M+  G +P+ +   +L+  H + G  ++A ++   M
Sbjct: 196 TALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARM 253



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 84/182 (46%), Gaps = 5/182 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +   Y  +I   C     +D+  LL EMK+     +  +   +++ +  + E
Sbjct: 445 MTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHE 502

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF-GLHPNVAVYT 119
              +L LL E+ +      +  + +LID   K+G +  A++    +  F   + N   Y 
Sbjct: 503 FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNT--YV 560

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LI+ L     +++A  L+ +M +R  +P+ +    LI G L+   ++EAL L + + ++
Sbjct: 561 SLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQM 620

Query: 180 GV 181
            +
Sbjct: 621 DI 622



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 6/148 (4%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK-- 167
           G +P+  ++ +L+   C+      A  L  +M      P    Y  LI G    E     
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65

Query: 168 EALNLK----NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
           E + L     N M E+GV L+     +    L   G  ++A  +  EM+ +G +PD    
Sbjct: 66  EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
             ++        +++A +L  EM   G+
Sbjct: 126 SKVIGYLCNASKVEKAFQLFQEMKRNGI 153


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/208 (33%), Positives = 112/208 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C   K +++  L  +MKE+G   +    T L+ A+ + G+ +EAL   +EM+
Sbjct: 263 YTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMV 322

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ IE  V T+ VLID  CK G + E ++    M + GL  +V  + ALIDG CK+  +E
Sbjct: 323 ENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMME 382

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + D M    + P++  Y  LI G+ + +S   A+ L N+M E  +  +L  Y +L+
Sbjct: 383 DAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLI 442

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDE 220
            GL +   +  A  L H MI  G +PD+
Sbjct: 443 HGLCKARVVDSAWRLHHLMIKDGFVPDQ 470



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 115/255 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      D+P Y  ++   C   K  ++     EM ENG+  N    T L+D + K G+
Sbjct: 286 MKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGK 345

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + +L  ML+  +  +VV F  LIDG CK G++ +AI     M    + PN   Y  
Sbjct: 346 MDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNE 405

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+K  ++RA  L ++M +  + P+   Y  LI G  K      A  L + M + G
Sbjct: 406 LICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDG 465

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   + + +  L + G +++A  +F  +  +    +E L  +L+  + +     +A 
Sbjct: 466 FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAH 525

Query: 241 ELQNEMMGRGLLSGS 255
            L   M+  G    S
Sbjct: 526 LLFKRMLFEGCFPNS 540



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 114/255 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  +   Y  +I G C +   + +  LL++M EN L+ N V   TL+    KA  
Sbjct: 391 MKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARV 450

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L   M+         TFC  ID LCK G V +A   F  + +     N  +YTA
Sbjct: 451 VDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTA 510

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK      A  LF  M      P++  +  L+DG  K    ++A++L + M +  
Sbjct: 511 LIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFD 570

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               ++ YT L+  + R      A +   +MI  G  P+ +   + +K +  +G + EA 
Sbjct: 571 AKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAE 630

Query: 241 ELQNEMMGRGLLSGS 255
           E+  ++   G+L  S
Sbjct: 631 EMVVKIKEEGILLDS 645



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 2/234 (0%)

Query: 21  CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           C+ S   +++ +L+ +  +  + +      L     + G   E   L  +ML+  +E  +
Sbjct: 133 CVSS--HEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNL 190

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           ++F  +++  CK G V  A  YF  +  FG   +   YT+LI G CK + +  A  +F+ 
Sbjct: 191 ISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEI 250

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           MP+   + +  +YT LI G+ +     EAL L  +M E G   D+  YT LV      G 
Sbjct: 251 MPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGK 310

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             EA   F EM+  GI P+      L+    + G MDE +E+ + M+ +GL+S 
Sbjct: 311 ETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSS 364



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 107/250 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  +L  Y T+I GLC     + +  L   M ++G   +       +D   K G+
Sbjct: 426 MYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGK 485

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + + + +   E     +  LIDG CK+    +A   F RM   G  PN   +  
Sbjct: 486 VEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNV 545

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGL K+  +E A +L D M K D  P    YT LI+  L+   F  A    ++M   G
Sbjct: 546 LLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSG 605

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YT+ +    R G L EA  +  ++   GIL D  +   L+  +   G +D A 
Sbjct: 606 CQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAF 665

Query: 241 ELQNEMMGRG 250
            +   M   G
Sbjct: 666 GVLIRMFDTG 675



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 126/308 (40%), Gaps = 61/308 (19%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K+ +A+  LY  +I G C   KF D+ LL   M   G   N++    L+D   K G+
Sbjct: 496 LKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGK 555

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+SL+D M     + TV T+ +LI+ + +      A  +  +M   G  PNV  YTA
Sbjct: 556 VEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTA 615

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY-------------------- 160
            I   C++  +  A  +  ++ +  ++ D+  Y  L++ Y                    
Sbjct: 616 FIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTG 675

Query: 161 -----------LKHESF----KEALNLK--------------------------NRMTEV 179
                      LKH  F    KE + L                            +M E 
Sbjct: 676 CEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQ 735

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   ++N Y+ L+ GL +  HL  A  LF+ M   GI P E +  SLL    + G  +EA
Sbjct: 736 GCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEA 795

Query: 240 IELQNEMM 247
           + L + MM
Sbjct: 796 LRLLDSMM 803



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 100/229 (43%), Gaps = 3/229 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   +   I  LC   K E +  +   +KE    AN  + T L+D Y KA + S+A  L 
Sbjct: 469 DQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLF 528

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             ML        +TF VL+DGL K G V +A+     M  F   P V  YT LI+ + ++
Sbjct: 529 KRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRE 588

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           +  +RA    D+M      P+   YTA I  Y +     EA  +  ++ E G+ LD   Y
Sbjct: 589 SDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIY 648

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH--YERGN 235
             LV      G L  A  +   M   G  P      S+L KH  +E+ N
Sbjct: 649 DVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSR-QTYSILLKHLIFEKYN 696



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 123/276 (44%), Gaps = 26/276 (9%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + ++  Y   I   C + +  +++ ++ ++KE G+  ++ I   L++AY   G+
Sbjct: 601 MISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQ 660

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLC-----KSGL---------------VREAI 100
              A  +L  M D+  E +  T+ +L+  L      K G+               + +  
Sbjct: 661 LDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIA 720

Query: 101 DY------FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
           D+      F +M + G  PNV  Y+ LI GLCK   +  A  LF+ M +  + P    + 
Sbjct: 721 DFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHN 780

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +L+    K    +EAL L + M E      L +Y  LV GL   G+ ++A  +F  ++  
Sbjct: 781 SLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSC 840

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G   DE++   LL     +G +DE  +L++ M   G
Sbjct: 841 GYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 110/246 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ +L  + T++   C       +K     + + G   ++   T+L+  Y K  E
Sbjct: 181 MLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHE 240

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + + M         V++  LI G C+ G + EA++ F +M + G  P+V  YT 
Sbjct: 241 LGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTV 300

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C+      A   F+EM +  + P+   YT LID + K     E + + + M E G
Sbjct: 301 LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKG 360

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  + +L+ G  + G +++A  +   M    + P+      L+     + +MD A+
Sbjct: 361 LVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAM 420

Query: 241 ELQNEM 246
            L N+M
Sbjct: 421 ALLNKM 426



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 3/175 (1%)

Query: 17  IWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           IW +   + FE   +L  +M E G   N    + L+    K    S A  L + M +S I
Sbjct: 716 IWKI---ADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGI 772

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
             +      L+   CK G+  EA+     M ++    ++  Y  L+ GL ++   E+A  
Sbjct: 773 SPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEE 832

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +F  +       D   +  L+DG ++     E   L++ M + G  L  + +T L
Sbjct: 833 IFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 38/289 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFK--- 57
           M  + I+ +L  +   I GLC   K   ++ ++ ++K  G + N V   TL+D + K   
Sbjct: 191 MIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGS 250

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK------------------------- 92
           AG+   A ++L EML ++I    +TF  LIDG CK                         
Sbjct: 251 AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVT 310

Query: 93  ----------SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
                     +G + EAI  + +M   GL PN+  + ALI+G CKK  I+ AR LFD++ 
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA 370

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           ++D++P+   +  +ID + K    +E   L N M + G+  +++ Y  L+ GL R  +++
Sbjct: 371 EQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVR 430

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            A+ L +EM    +  D +    L+    + G   +A +L  EM+  G+
Sbjct: 431 AAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGV 479



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 111/219 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  +K ++  +  +I G C +   ++++ L  ++ E  L  N +   T++DA+ KAG 
Sbjct: 334 MVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGM 393

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  +L + MLD  I   V T+  LI GLC++  VR A      M ++ L  +V  Y  
Sbjct: 394 MEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNI 453

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK     +A  L  EM    + P+   Y  L+DGY    + K AL ++ +M + G
Sbjct: 454 LIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG 513

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              ++  Y  L+ G  + G L++A  L +EM+ +G+ P+
Sbjct: 514 KRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPN 552



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 117/238 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C +     +K    EM+  GL  N V   +L++     G+  EA++L D+M+
Sbjct: 276 FNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV 335

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++  +VTF  LI+G CK  +++EA   F  + +  L PN   +  +ID  CK   +E
Sbjct: 336 GLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMME 395

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L + M    + P+ + Y  LI G  ++++ + A  L N M    +  D+  Y  L+
Sbjct: 396 EGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILI 455

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  + G   +A  L  EM+  G+ P+ +   +L+  +   GN+  A++++ +M   G
Sbjct: 456 GGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG 513



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +K ++  Y ++I GL    K +++  L  +M   GL  N V    L++ + K   
Sbjct: 299 MQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKM 358

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L D++ +  +    +TF  +ID  CK+G++ E       M D G+ PNV+ Y  
Sbjct: 359 IKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNC 418

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC+   +  A+ L +EM   ++  D   Y  LI G+ K     +A  L   M  VG
Sbjct: 419 LIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVG 478

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y +L+ G    G+L+ A  +  +M   G   + +    L+K   + G +++A 
Sbjct: 479 VKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDAN 538

Query: 241 ELQNEMMGRGL 251
            L NEM+ +GL
Sbjct: 539 RLLNEMLEKGL 549



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 108/211 (51%), Gaps = 3/211 (1%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  L+ A  K  E  E   +  EM+  RI+  + TF + I+GLCK+G + +A D    + 
Sbjct: 168 CNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIK 227

Query: 108 DFGLHPNVAVYTALIDGLCKKNC---IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            +G  PN+  Y  LIDG CKK     + RA  +  EM    + P+   +  LIDG+ K E
Sbjct: 228 AWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDE 287

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
           +   A N    M   G+  ++  Y SL+ GLS  G L EA  L+ +M+G G+ P+ +   
Sbjct: 288 NVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFN 347

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           +L+    ++  + EA +L +++  + L+  +
Sbjct: 348 ALINGFCKKKMIKEARKLFDDIAEQDLVPNA 378



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 113/226 (50%), Gaps = 3/226 (1%)

Query: 30  KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG 89
           + +  EM +  +  N       ++   KAG+ ++A  +++++        +VT+  LIDG
Sbjct: 185 QYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDG 244

Query: 90  LCK---SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
            CK   +G +  A      M    + PN   +  LIDG CK   +  A+N F+EM ++ +
Sbjct: 245 HCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGL 304

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P+   Y +LI+G   +    EA+ L ++M  +G+  ++  + +L+ G  +   ++EAR 
Sbjct: 305 KPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARK 364

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           LF ++  + ++P+ I   +++    + G M+E   L N M+  G+ 
Sbjct: 365 LFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIF 410



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 17/219 (7%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           AN +I   L+ AY    E   A  +   + D   ++++ +   L+  L K     E    
Sbjct: 128 ANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYV 187

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  M    + PN+  +   I+GLCK   + +A ++ +++      P+   Y  LIDG+ K
Sbjct: 188 YKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCK 247

Query: 163 HES----------FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
             S           KE L  K    E+        + +L+ G  +  ++  A+  F EM 
Sbjct: 248 KGSAGKMYRADAILKEMLANKICPNEI-------TFNTLIDGFCKDENVLAAKNAFEEMQ 300

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +G+ P+ +   SL+      G +DEAI L ++M+G GL
Sbjct: 301 RQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGL 339



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 47/91 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +   Y T++ G C+E   + +  + ++M++ G  AN V    L+  + K G+  +A 
Sbjct: 479 VKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDAN 538

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV 96
            LL+EML+  +     T+ V+   + + G +
Sbjct: 539 RLLNEMLEKGLNPNRTTYDVVRLEMLEKGFI 569


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 121/247 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   Y ++I G C     +++  +   M + G   N V  T L+    +AG  +EAL
Sbjct: 225 LHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEAL 284

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  +M +     TV T+ VLI  L  SG   EA++ F  M + G  PNV  YT LIDGL
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+N ++ AR +  EM ++ +IP    Y ALIDGY K     +A  + + M       + 
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNT 404

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ GL +   + +A  L ++M+ R + P  I   SL+    +  +++ A  L + 
Sbjct: 405 RTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSL 464

Query: 246 MMGRGLL 252
           M   GL+
Sbjct: 465 MNENGLV 471



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 115/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC   +  ++  L ++M E+         T L+ A   +G   EAL+L +EM 
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   E  V T+ VLIDGLCK   + EA      M + GL P+V  Y ALIDG CK+  I+
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + D M      P+T  Y  LI G  K     +A+ L N+M E  +   L  Y SL+
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   L+ A  L   M   G++PD+      +    + G ++EA  L + +  +G+
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K  + ++  Y  +I GLC E+K ++++ +LSEM E GL  + V    L+D Y K G 
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +LD M  +       T+  LI GLCK   V +A+    +M +  L P++  Y +
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK N +E A  L   M +  ++PD   Y+  ID   K    +EA  L + +   G
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   YT+L+ G  + G +  A  L   M+    LP+      L++   +   M EA 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 241 ELQNEMMGRGL 251
            L  +M+  G+
Sbjct: 565 SLVAKMLTMGV 575



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I+ L    +  ++  L +EMKE G   N    T L+D   K  +  EA  +L EM 
Sbjct: 302 YTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS 361

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +  +VVT+  LIDG CK G++ +A +    M      PN   Y  LI GLCKK  + 
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH 421

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L ++M +R + P    Y +LI G  K    + A  L + M E G+  D   Y+  +
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L + G ++EA  LF  +  +G+  +E++  +L+  + + G +D A  L   M+    L
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541

Query: 253 SGS 255
             S
Sbjct: 542 PNS 544



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 103/227 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y   I  LC E + E++  L   +K  G+ AN VI T L+D Y K G+   A SLL+ ML
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +        T+ VLI+GLCK   ++EA     +M   G+ P V  YT LI  + K    +
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F+ M      PD   YTA +  Y      +E  ++  +M E G+  DL  YT L+
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            G +R G    A      M+  G  P   +   L+K       M E 
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703



 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 119/240 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC + K   +  LL++M E  L+ + +   +L+    K  +   A  LL  M 
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ +     T+ V ID LCK G V EA   F  +   G+  N  +YTALIDG CK   I+
Sbjct: 467 ENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKID 526

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L + M     +P++  Y  LI+G  K +  KEA +L  +M  +GV   +  YT L+
Sbjct: 527 VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             + + G    A  +F+ M+  G  PD     + L  ++ +G ++E  ++  +M   G+L
Sbjct: 587 GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGIL 646



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 112/250 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   L  Y ++I G C  +  E +  LLS M ENGL  +    +  +D   K G 
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +L D +    ++   V +  LIDG CK G +  A     RM +    PN   Y  
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK+  ++ A +L  +M    + P    YT LI   LK  +F  AL + N M  +G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YT+ +      G L+E   +  +M   GILPD +    L+  +   G    A 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 241 ELQNEMMGRG 250
           +    M+  G
Sbjct: 670 DFLKCMVDTG 679



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 131/305 (42%), Gaps = 53/305 (17%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K +KA+  +Y  +I G C   K + +  LL  M  +    N+     L++   K  +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SL+ +ML   ++ TVVT+ +LI  + K G    A+  F  M   G  P+V  YTA
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY-------------------- 160
            +     +  +E   ++  +M +  ++PD   YT LIDGY                    
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679

Query: 161 --------------LKHES-------------------FKEALNLKNRMTEVGVDLDLNA 187
                         L HE+                   ++ AL L  +M E G  +D++ 
Sbjct: 680 CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSI 739

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y +L+ G  +   L+EA+ L H M  RG+ P E +  SLL    + G   EA+ L + M+
Sbjct: 740 YGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMV 799

Query: 248 GRGLL 252
             GLL
Sbjct: 800 ENGLL 804



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 6   IKADLPLYGTIIWGLCIESKF---EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K  L  Y TI+  L   SKF   ++ K +  E+  N ++ N      +++ Y K G   
Sbjct: 155 FKPTLRCYNTILMSL---SKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA     +++ + +     T+  LI G C++  V  A + F  MP  G   N   YT LI
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GLC+   I  A  LF +M + +  P    YT LI          EALNL N M E G +
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +++ YT L+ GL +   + EAR +  EM  +G++P  +   +L+  + + G +D+A E+
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391

Query: 243 QNEM 246
            + M
Sbjct: 392 LDLM 395



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 96/183 (52%)

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           E+L+++I   + TF  +++G CK G V EA  Y  ++   GLHP+   YT+LI G C+  
Sbjct: 184 ELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNK 243

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++ A  +F  MP++    +  +YT LI G  +     EAL L   MTE      +  YT
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L++ LS  G   EA  LF+EM  +G  P+      L+    +   MDEA ++ +EM  +
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363

Query: 250 GLL 252
           GL+
Sbjct: 364 GLI 366



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 120/262 (45%), Gaps = 18/262 (6%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y   +     +   E+   ++++M E G+  + V  T L+D Y + G    A  
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFD 670

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE------------------AIDYFGRMPD 108
            L  M+D+  + ++    +LI  L     ++E                  A+  F +M +
Sbjct: 671 FLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVE 730

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            G   +V++Y ALI G C++  +E A+ L   M +R M P    Y +L+D   K   + E
Sbjct: 731 HGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAE 790

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A+ L + M E G+   L +Y  LV GL   G  ++A+ +FH ++  G   DE+    L+ 
Sbjct: 791 AVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLID 850

Query: 229 KHYERGNMDEAIELQNEMMGRG 250
              +R  +DE  EL + M  +G
Sbjct: 851 GLLKRDLVDECSELIDIMEEKG 872



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 83/151 (54%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +YG +I G C + + E+++ L+  MKE G++ +  I  +L+D   K G  +EA+ L+
Sbjct: 736 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 795

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+++ +   + ++ +L+ GL   G   +A   F  +   G + +   +  LIDGL K+
Sbjct: 796 DAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKR 855

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           + ++    L D M ++   P+   Y+ LI+G
Sbjct: 856 DLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 81/176 (46%)

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
           + + T+  +  ++  L K  L+ E    +  + +  + PN+  + A+++G CK   +  A
Sbjct: 154 KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA 213

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
                ++ +  + PDT  YT+LI G+ +++    A  +   M + G   +  +YT+L+ G
Sbjct: 214 ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L   G + EA  LF +M      P       L+      G   EA+ L NEM  +G
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 1/170 (0%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L ++M++    + V  +  LI G C+   + EA      M + G+ P+  +Y +L+D
Sbjct: 721 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 780

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             CK      A  L D M +  ++P   +Y  L+ G     S ++A  + + +   G + 
Sbjct: 781 CCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNY 840

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
           D  A+  L+ GL +   + E   L   M  +G  P+  L  SLL +  ER
Sbjct: 841 DEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNP-LTYSLLIEGLER 889



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 3/172 (1%)

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
           +I ++++  C  I+ +     V E         +F   P +  Y  ++  L K   I+  
Sbjct: 122 KIRISMIKSCCSIEDVL---FVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEM 178

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
           + ++ E+    + P+   + A+++GY K  +  EA    +++ + G+  D   YTSL+ G
Sbjct: 179 KTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILG 238

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             R   +  A  +F  M  +G   +E+   +L+    E G ++EA++L  +M
Sbjct: 239 HCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 125/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +Y TII G+C E   + +  +L+ M   GL  N V   TL+     A    E   LL
Sbjct: 296 DIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM D    +  VTF +L+D  C++GLV   I+   +M   G  P+V  YT +I+G CK+
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKE 415

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I+ A  L   M      P+T +YT ++ G    E + +A +L ++M + G  L+   +
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+  L + G +++A  L  +M+  G  PD I   +++    + G  DEA+EL N M+ 
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535

Query: 249 RGL 251
           +G+
Sbjct: 536 KGM 538



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 121/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ GLC   ++E+++ LL+EM +     + V    L+D + + G 
Sbjct: 323 MPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGL 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL++ML       V+T+  +I+G CK GL+ EA+     M   G  PN   YT 
Sbjct: 383 VDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC       A +L  +M ++    +   +  LI+   K    ++A+ L  +M   G
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL +Y++++ GL + G   EA  L + M+ +G+ P+ I+  S+       G +++ I
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 562

Query: 241 EL 242
           ++
Sbjct: 563 QM 564



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 115/244 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NT+  T ++     A    +A  L+
Sbjct: 401 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 460

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+     +  +TF  LI+ LCK GLV +AI+   +M   G  P++  Y+ +IDGL K 
Sbjct: 461 SQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 520

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + A  L + M  + M P+T  Y+++     +     + + + + + +  +  D   Y
Sbjct: 521 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLY 580

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L + G  + A      M+  G +P+E     L++     G + EA E+  E+  
Sbjct: 581 NAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCS 640

Query: 249 RGLL 252
           +G L
Sbjct: 641 KGAL 644



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y  ++ GLC+  ++   + L+ EM       N V   TL+    + G       
Sbjct: 224 EPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHE 283

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L +M +      +  +  +IDG+CK G ++ A +   RMP +GL PNV  Y  L+ GLC
Sbjct: 284 VLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLC 343

Query: 127 K----------------KNC-------------------IERARNLFDEMPKRDMIPDTT 151
                            K+C                   ++R   L ++M     +PD  
Sbjct: 344 SAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVI 403

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT +I+G+ K     EA+ L   MT  G   +  +YT ++ GL       +A  L  +M
Sbjct: 404 TYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM 463

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I +G   + I   +L+    ++G +++AIEL  +M+  G
Sbjct: 464 IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 107/217 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K +   Y  ++ GLC   ++ D++ L+S+M + G   N +   TL++   K G 
Sbjct: 428 MTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGL 487

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL +ML +     ++++  +IDGL K+G   EA++    M + G+ PN  +Y++
Sbjct: 488 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 547

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +   L ++  I +   +FD +    +  D   Y A+I    K    + A+     M   G
Sbjct: 548 IASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSG 607

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
              + + YT L+ GL+  G ++EA+ +  E+  +G L
Sbjct: 608 CVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 644



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 6/245 (2%)

Query: 11  PLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           P+Y  I+   C    F  +  +L ++   G   +   C  +++A    G   +AL LL +
Sbjct: 158 PMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRD 217

Query: 71  MLDSRIEVTVVTFCVLIDGLCKS---GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           +     E  VV++  ++ GLC +   G V+E ++   RM      PN+  +  LI  LC+
Sbjct: 218 LPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM---ACPPNIVTFNTLISYLCR 274

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
               ER   +  +M +    PD   Y  +IDG  K    K A  + NRM   G+  ++  
Sbjct: 275 NGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVC 334

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y +L+ GL      +E   L  EM  +    D++    L+    + G +D  IEL  +M+
Sbjct: 335 YNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 394

Query: 248 GRGLL 252
             G +
Sbjct: 395 VHGCM 399



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 104/235 (44%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  +C +   + +  LL ++   G   + V    ++     A        L++EM+   
Sbjct: 198 VLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
               +VTF  LI  LC++GL     +   +M + G  P++ +Y  +IDG+CK+  ++ A 
Sbjct: 258 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAH 317

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            + + MP   + P+   Y  L+ G    E ++E   L   M +    LD   +  LV   
Sbjct: 318 EILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFF 377

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            + G +     L  +M+  G +PD I   +++    + G +DEA+ L   M   G
Sbjct: 378 CQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 107/237 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC   +  D+  +L EM   G      +   +++A  + G    A+ +L+++ 
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                + V    ++++ +C  G V +A+     +P FG  P+V  Y A++ GLC      
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWG 244

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             + L +EM +    P+   +  LI    ++  F+    +  +M E G   D+  Y +++
Sbjct: 245 CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATII 304

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            G+ + GHL+ A  + + M   G+ P+ +   +LLK        +E  EL  EM  +
Sbjct: 305 DGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDK 361



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/237 (18%), Positives = 88/237 (37%), Gaps = 38/237 (16%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
            ++  Y +AG+   A  L   +    +     T+  ++  LC  G + +A+     MP  
Sbjct: 95  AMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMPRR 151

Query: 110 GLHPNVAVYTALIDGLCK-----------------------KNC------------IERA 134
           G  P   +Y  +++  C+                        NC            +++A
Sbjct: 152 GCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKA 211

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            +L  ++P     PD  +Y A++ G    + +     L   M  +    ++  + +L+  
Sbjct: 212 LHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISY 271

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L R G  +    +  +M   G  PD  +  +++    + G++  A E+ N M   GL
Sbjct: 272 LCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328


>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 638

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 123/245 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  + ++++G C E K  ++K +L +MKE G   + V  T L+  Y  AG+ ++A  LL
Sbjct: 252 NLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLL 311

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M     E     + VLI  LCK   + EA+  F  M  +    +V  YTAL+ G CK 
Sbjct: 312 KDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKW 371

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I++   + D+M K+ ++P    Y  ++  + K E   E L L  +M ++    D+  Y
Sbjct: 372 GKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIY 431

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             ++    + G ++EA  L++EM G G+ P     + ++     +G + EA +   EM+ 
Sbjct: 432 NVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEACDHFKEMVA 491

Query: 249 RGLLS 253
           RGL S
Sbjct: 492 RGLFS 496



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 1/215 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L EM   GL  +  +   L+DA  K G   +A  L ++M   R  V +  F  L+ G C
Sbjct: 206 VLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RLRFPVNLRYFTSLLYGWC 264

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           +   + EA     +M + G  P++  YT L+ G      +  A +L  +M +R   P+ T
Sbjct: 265 REEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNAT 324

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LI    K +  +EA+ +   M     + D+  YT+LV G  + G + +  ++  +M
Sbjct: 325 CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDM 384

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           I +G++P ++  + ++  H ++  + E +EL  +M
Sbjct: 385 IKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKM 419



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 1/164 (0%)

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           F VL+     + +V++AI+    MP FGL P+  V+  L+D LCK   ++ A  LF++M 
Sbjct: 187 FVVLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 246

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
            R  + +   +T+L+ G+ + E   EA  +  +M E G + D+  YT+L+ G +  G + 
Sbjct: 247 LRFPV-NLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMA 305

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +A  L  +M  RG  P+      L++   +   M+EA+++  EM
Sbjct: 306 DAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEM 349



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 93/217 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + D+  Y  ++ G     K  D+  LL +M+  G   N    T L+ A  K   
Sbjct: 279 MKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDR 338

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM     E  VVT+  L+ G CK G + +       M   GL P+   Y  
Sbjct: 339 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMH 398

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    KK  +     L ++M + +  PD   Y  +I    K    KEA+ L N M   G
Sbjct: 399 IMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNG 458

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +    + +  ++ GL+  G L EA   F EM+ RG+ 
Sbjct: 459 LSPGADTFVIIINGLTSQGCLLEACDHFKEMVARGLF 495


>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 418

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 118/221 (53%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYV 413



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMI 338



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 102/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +I+ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYXQMLSQSL 272



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 91/185 (49%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
             +E L+     ++  F +L+    K G +R A   F  +  +GL P+V  +  L++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   ++    L + M    + PD   Y+ LI+G  K     +A  L + M + G+  +  
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEM 302

Query: 247 MGRGL 251
             +GL
Sbjct: 303 SMKGL 307



 Score = 37.4 bits (85), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI+ D   Y  +I GLC E +  D++ +L EM   GL       T +++ + K G+
Sbjct: 337 MIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 61  PSEALSLLDEMLDSRIEVTVVT 82
                 LL EM       +VVT
Sbjct: 397 VWTGSKLLKEMQRDGYVPSVVT 418


>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 418

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVV 417



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 118/221 (53%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCM 413



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 102/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 90/183 (49%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +E L+     ++  F +L+    K G +R A   F  +  + L P+V  +  L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++    L + M    + PD   Y+ LI+G  K     +A  L + M + G+  +   +
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304

Query: 249 RGL 251
           +GL
Sbjct: 305 KGL 307


>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 418

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 118/221 (53%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 102/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 90/183 (49%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +E L+     ++  F +L+    K G +R A   F  +  + L P+V  +  L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++    L + M    + PD   Y+ LI+G  K     +A  L + M + G+  +   +
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM  
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304

Query: 249 RGL 251
           +GL
Sbjct: 305 KGL 307


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 118/244 (48%), Gaps = 1/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  L G ++  +   S F+  K LL+E++   +  N+ +   L+    K  +  EA+ L 
Sbjct: 107 DSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLF 166

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            E L  +      TF +LI GLC+ G V  A + F  M  FG  P+V  Y  LI+GLCK 
Sbjct: 167 KEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKA 226

Query: 129 NCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           N ++R   LF E+  R D  PD   YT++I G+ K    KEA NL   M   G+  ++  
Sbjct: 227 NEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVIT 286

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +  L+ G  + G++ EA  ++ +M       D +   SL+  +   G ++  ++  N M 
Sbjct: 287 FNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMK 346

Query: 248 GRGL 251
            R +
Sbjct: 347 TRNV 350



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 112/235 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y +II G C   K +++  L  EM  +G+  N +    L+D + K G  +EA ++ 
Sbjct: 248 DIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMY 307

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M        VVTF  LIDG C++G V   + ++  M    + P V  Y  LI+ LCK+
Sbjct: 308 RKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKE 367

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +  AR+   ++    +IP    Y  +IDG+ K  +  E   +   M E   D D   +
Sbjct: 368 NRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTF 427

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           T L+ G    G + EA  +F+ M+     PD I   SL+    + G  +EA  ++
Sbjct: 428 TILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIR 482



 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 1/241 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEPSEALSL 67
           D+  Y T+I GLC  ++ +    L  E++     + + V  T+++  + K+G+  EA +L
Sbjct: 212 DVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNL 271

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            +EM+ S I+  V+TF VLIDG  K G + EA   + +M  F    +V  +T+LIDG C+
Sbjct: 272 FEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCR 331

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +      ++ M  R++ P    Y  LI+   K     EA +   ++    +      
Sbjct: 332 AGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFM 391

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  ++ G  + G++ E  V+  EM  +   PD++    L+  H  +G M EAI + N M+
Sbjct: 392 YNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRML 451

Query: 248 G 248
            
Sbjct: 452 A 452



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 1/243 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+      Y  ++  LC     +   ++   M  +G   ++ +   L+    +A +    
Sbjct: 68  NVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMV 127

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             LL E+    + +    +  L+  L K   V EAI  F         P+   +  LI G
Sbjct: 128 KKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRG 187

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL-KNRMTEVGVDL 183
           LC+   ++RA  +F +M     +PD   Y  LI+G  K    +    L K   +      
Sbjct: 188 LCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSP 247

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  YTS++ G  + G ++EA  LF EM+  GI P+ I    L+    + GN+ EA  + 
Sbjct: 248 DIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMY 307

Query: 244 NEM 246
            +M
Sbjct: 308 RKM 310



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 70/171 (40%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           AD+  + ++I G C   +        + MK   ++        L++A  K    +EA   
Sbjct: 317 ADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDF 376

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L ++ +S I      +  +IDG CK+G V E       M +    P+   +T LI G C 
Sbjct: 377 LGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCV 436

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           K  +  A N+F+ M      PD     +LI   LK     EA  ++    E
Sbjct: 437 KGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALE 487


>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 418

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 118/221 (53%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYV 413



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMI 338



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 120/244 (49%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A L  +  ++     E +   ++ +   + + GL  + V   TLM+ Y K G+  E   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            + M  S ++  V T+ VLI+GLCK   + +A + F  M D GL PN   +T LIDG CK
Sbjct: 194 KNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              ++ A  ++ +M  + + PD   Y  LI G  K    K+A +L + M+  G+  D   
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKIT 313

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+L+ G  + GHL+ A      MI   I  D++   +L+    + G   +A ++  EM+
Sbjct: 314 YTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 248 GRGL 251
             GL
Sbjct: 374 SVGL 377



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 102/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +J+ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 91/185 (49%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
             +E L+     ++  F +L+    K G +R A   F  +  +GL P+V  +  L++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   ++    L + M    + PD   Y+ LI+G  K     +A  L + M + G+  +  
Sbjct: 183 KLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302

Query: 247 MGRGL 251
             +GL
Sbjct: 303 SMKGL 307


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 124/249 (49%), Gaps = 3/249 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+  + D+  YGT+I GLC + +  ++  L S+M   G++ N    ++L+      G 
Sbjct: 106 MTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGH 165

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR---EAIDYFGRMPDFGLHPNVAV 117
             EA+ L   M+  +I    +TF  L+D LCK G+++   +A+  F  M   GL P+   
Sbjct: 166 WKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVT 225

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y  LI GLC    +  A  LF EM     IPD   Y  L D   K+    EA+ L   + 
Sbjct: 226 YNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIE 285

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
              +D D++ Y+ ++ G+ R G L+ AR LF ++  +G+ PD      ++    ++G + 
Sbjct: 286 GTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLA 345

Query: 238 EAIELQNEM 246
           EA +L  EM
Sbjct: 346 EASKLFGEM 354



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 3/222 (1%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M   G+  NT     L++++        A S+L ++L    + +  TF  LI GLC
Sbjct: 32  LYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLC 91

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + EA+  F +M   G  P+V  Y  LI+GLCK   +  A +LF +M  + + P+  
Sbjct: 92  VEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNF 151

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ---EARVLF 208
            Y++LI G      +KEA+ L   M    +  D   + +LV  L + G +Q   +A  LF
Sbjct: 152 TYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLF 211

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            EM  +G++PD +   +L+      G + +AI L +EM+  G
Sbjct: 212 EEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 253



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 95/194 (48%), Gaps = 3/194 (1%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S  LSL  +M    I     T  +LI+  C    +  A    G +   G  P+ A +T L
Sbjct: 27  STVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTL 86

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I GLC +  I  A  LFD+M      PD   Y  LI+G  K     EAL+L + M   G+
Sbjct: 87  IRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGI 146

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN---MDE 238
             +   Y+SL+ GL   GH +EA  LF+ MI R I+PD++   +L+    + G    MD+
Sbjct: 147 SPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDK 206

Query: 239 AIELQNEMMGRGLL 252
           A+ L  EM  +GL+
Sbjct: 207 AMGLFEEMSQQGLI 220



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 7/194 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFE--DSKL-LLSEMKENGLTANTVICTTLMDAYFK 57
           M  + I  D   + T++  LC E   +  D  + L  EM + GL  +TV   TL+     
Sbjct: 176 MIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCH 235

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            G   +A++L  EM+       +VT+ +L D LCK+  + EA+     +    L P++ +
Sbjct: 236 VGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHI 295

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y+ ++DG+C+   +E AR+LF ++  + + PD   YT +I+G  +     EA  L   M 
Sbjct: 296 YSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 355

Query: 178 EVGVDLDLNAYTSL 191
           E     D+ +Y++ 
Sbjct: 356 EN----DIESYSTF 365



 Score = 74.7 bits (182), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 83/182 (45%)

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           ML  R   ++V F  L+  + +       +  + +M  FG+  N      LI+  C  N 
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +  A ++  ++ K    P T  +T LI G        EAL L ++MT  G   D+  Y +
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ GL +   L EA  LF +M+ +GI P+     SL+      G+  EAI L   M+ R 
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 251 LL 252
           ++
Sbjct: 181 IM 182


>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 418

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVV 417



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 119/221 (53%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + AL  + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYV 413



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+    + G+++ A+E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMI 338



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 102/210 (48%)

Query: 42  TANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
           T++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    
Sbjct: 63  TSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
           ++    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           K     E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ +
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              +L+  H + G +  A+E+  +M+ + L
Sbjct: 243 TFTTLIDGHCKNGRVVLAMEIYKQMLSQSL 272



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 91/183 (49%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +E L+     ++  F +L+    K G +R A   F  +  +GL P+V  +  L++G  K 
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKL 184

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++    L + M    + PD   Y+ LI+G  K     +A  L + M + G+  +   +
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM  
Sbjct: 245 TTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304

Query: 249 RGL 251
           +GL
Sbjct: 305 KGL 307


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 107/201 (53%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           LM    ++G+ + A ++ DEML   +  TVVTF  L+ G+CK+  +  A    G M   G
Sbjct: 250 LMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAG 309

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+V  Y A + GLCK   I+ A  +F+EM +R + P+T  +T LID + K  +    L
Sbjct: 310 VAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGL 369

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   M   G+  DL AY +L  GL R   L+ A  +  EM   G+ PD++   +L+   
Sbjct: 370 ELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGF 429

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + G +D A+E++ EM   G+
Sbjct: 430 CKEGELDMAMEMKQEMSDEGV 450



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 128/288 (44%), Gaps = 38/288 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  YG  + GLC   + +D+  +  EM+E G+  NTV+ TTL+DA+ K G 
Sbjct: 305 MAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGN 364

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +  L L  EM    I+  +V +  L +GLC+   ++ A D    M + GL P+   YT 
Sbjct: 365 VAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTT 424

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI--------------------------------- 147
           LIDG CK+  ++ A  +  EM    +                                  
Sbjct: 425 LIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAG 484

Query: 148 --PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             PD T YT +ID + K+   K    L   M   G    +  Y  ++ G    G ++ A 
Sbjct: 485 LEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNAD 544

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           +L + M+  G+ PD+I    LL  H + G + +A EL++    +G++S
Sbjct: 545 MLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKS---AKGMVS 589



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 114/242 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ G+C  S    +  L   M + G+  +       M    KAG   +A+ + +EM 
Sbjct: 282 FNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMR 341

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +    V F  LID  CK G V   ++    M   G+  ++  Y AL +GLC+   ++
Sbjct: 342 ERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLK 401

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A ++ +EM    + PD   YT LIDG+ K      A+ +K  M++ GV LD   YT+L+
Sbjct: 402 AANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLI 461

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GLS+ G   ++  +  EM+  G+ PD      ++    +  ++    +L  EM  +G  
Sbjct: 462 SGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRK 521

Query: 253 SG 254
            G
Sbjct: 522 PG 523



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 111/233 (47%), Gaps = 3/233 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + IK DL  Y  +  GLC     + +  ++ EM+ NGL  + V  TTL+D + K GE
Sbjct: 375 MATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGE 434

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  EM D  + +  VT+  LI GL KSG   ++      M + GL P+   YT 
Sbjct: 435 LDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTM 494

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  CK + ++    L  EM  +   P    Y  +++G+      K A  L N M  +G
Sbjct: 495 VIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIG 554

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
           V  D   Y  L+ G  + G +++A  L      +G++ D  L  SL+ +  ++
Sbjct: 555 VCPDDITYNILLDGHCKHGKVRDAEELKS---AKGMVSDFGLYTSLINEFVKK 604



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 81/156 (51%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           V EA  ++ ++ D G+ P    +  L+  + +   +  ARN+FDEM +R + P    +  
Sbjct: 225 VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNT 284

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L+ G  K      A  L+  M + GV  D+  Y + + GL + G +Q+A  +F EM  RG
Sbjct: 285 LMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERG 344

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + P+ ++  +L+  H + GN+   +EL  EM  RG+
Sbjct: 345 VNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGI 380


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 121/242 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GL    + +++  L  ++K  G + N V  T ++D   KAG   + L   
Sbjct: 362 DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF 421

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M  S    T  T+ V+IDGLCK+ ++ +A   F +M   G  P+   YT LIDG  K 
Sbjct: 422 EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKA 481

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ AR L D M  +   P    Y +++ G+ K +   EA  +  +M E G +  L  +
Sbjct: 482 SKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 541

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           TSL+      G  +EA  +  EM  RG  PD IL  SL+   +  G + EA  + + M+ 
Sbjct: 542 TSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 601

Query: 249 RG 250
           +G
Sbjct: 602 KG 603



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G +       Y  +I GLC      D+  +  +M + G   +T+  TTL+D + KA +
Sbjct: 424 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 483

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LLD ML    E T VT+  ++ G CK  ++ EA +   +M + G  P + ++T+
Sbjct: 484 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 543

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+     K   E A  +  EM  R   PD   YT+LID         EA ++ + M E G
Sbjct: 544 LLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 603

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +++   S+ G+++ A  +   M   G+ PD     SL+  + +   +D+A 
Sbjct: 604 CAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAF 663

Query: 241 ELQNEMMGRGL 251
            + + M+  G+
Sbjct: 664 GVYDRMVASGI 674



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 6/246 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  ++ G    ++ +D+  L   +   G   N    TT++   + A    EA +  
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DE LD      V+++  +I GL  S  + EA + F ++   G  PNV  YTA+IDGL K 
Sbjct: 358 DEALD------VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKA 411

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             IE     F++M     +P  T YT +IDG  K +   +A  +  +M + G   D   Y
Sbjct: 412 GRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITY 471

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L+ G S+   + EAR L   M+ +G  P  +   S++    +   ++EA E+  +M  
Sbjct: 472 TTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 531

Query: 249 RGLLSG 254
           RG   G
Sbjct: 532 RGCEPG 537



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 116/241 (48%), Gaps = 1/241 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG+I+ G C      ++K ++++M+E G      I T+L+  Y   G   EA  +L EM 
Sbjct: 506 YGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 565

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  V+ +  LID L  +G V EA   F  M + G  P+   Y  +I    K   +E
Sbjct: 566 ARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVE 625

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + + M K  + PD  AY +L+DGY+K E   +A  + +RM   G+  +   +  L+
Sbjct: 626 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 685

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER-GNMDEAIELQNEMMGRGL 251
            GL + G    A  LF EM+ +  +P  ++  ++L     + G + EA     EM+ RG+
Sbjct: 686 HGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGI 745

Query: 252 L 252
           +
Sbjct: 746 I 746



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 117/252 (46%), Gaps = 16/252 (6%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K    D   YGTII         E +  +L  M ++G+  +     +LMD Y K     +
Sbjct: 602 KGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 661

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALI 122
           A  + D M+ S I+   VTF VL+ GL K G    A   F  M +   + P +  YT LI
Sbjct: 662 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILI 721

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGL K   +  A + F EM  R +IP+   YT+LI    K     EA  L   M ++GV+
Sbjct: 722 DGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 781

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI---------------LCISLL 227
            D+ AY++L+ GL     +  A  +F EM+ RG  P+E+               L +  +
Sbjct: 782 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 841

Query: 228 KKHYERGNMDEA 239
           K+H+ +G   EA
Sbjct: 842 KQHFSQGVAMEA 853



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+ LY ++I  L    +  +++ +   M E G   + +   T++  + K G 
Sbjct: 564 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 623

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +L+ M  S +      +  L+DG  K   V +A   + RM   G+ PN   +  
Sbjct: 624 VEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNV 683

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDT-TAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L+ GL K    +RA +LF EM ++D +P T  +YT LIDG  K     EA +    M + 
Sbjct: 684 LMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDR 743

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  + + YTSL++ L++ G + EA+ L  +M+  G+ PD     +L+    +   +D A
Sbjct: 744 GIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTA 803

Query: 240 IELQNEMMGRG 250
            ++  EMM RG
Sbjct: 804 WDVFQEMMKRG 814



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 1/218 (0%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           L EM   GL  + V C  +++   KA +  +A+ L  EM     E T+V++  +I GL  
Sbjct: 8   LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
              + EA  +F  M D G  P+V  +T LI G CK    +    L ++  KR   PD   
Sbjct: 68  IDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFL 126

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           YT++I GY K         +   M   G   D  AY  L+  L + G + EA  LF  M 
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMR 186

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             G L D +  ++L++     G +DEA EL  EM+ RG
Sbjct: 187 KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG 224



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 1/235 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GL    K +++    + M +NG   + +  TTL+  + KAG+P     LL++ L
Sbjct: 58  YNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQAL 117

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             R    V  +  +I G CK+G +         M   G  P+ A Y  LID LCK   ++
Sbjct: 118 -KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVD 176

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+ M K   + D   +  LI+    H    EA  L   M E G +  L    SL+
Sbjct: 177 EAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLI 236

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + L + G + EA  ++  ++ + +    +   SL+  + + G +D+ ++L  +M+
Sbjct: 237 FALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMV 291



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +  +  L ++ +++     + + E++  +L+EM   G   + ++ T+L+D  F  G 
Sbjct: 529 MRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 588

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + D M++       +T+  +I    K G V  A +    M   G+ P+   Y +
Sbjct: 589 VPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNS 648

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG  K   +++A  ++D M    + P+   +  L+ G  K      A +L   M E  
Sbjct: 649 LMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKD 708

Query: 181 -VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            V   L +YT L+ GL + G + EA   F EMI RGI+P+     SL+    + G + EA
Sbjct: 709 EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 768

Query: 240 IELQNEMMGRGL 251
            +L  +M+  G+
Sbjct: 769 KKLVEDMVKLGV 780



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 109/241 (45%), Gaps = 15/241 (6%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GLC   K + +  L  EM   G     V   T++       +  EA    + M+D+ 
Sbjct: 26  VLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNG 85

Query: 76  IEVTVVTFCVLIDGLCKSG-------LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            E  V+ F  LI G CK+G       L+ +A+  F         P+V +YT++I G CK 
Sbjct: 86  CEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRF--------RPDVFLYTSVIHGYCKA 137

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++    + +EM     IPD  AY  LID   K     EA  L  RM + G   D   +
Sbjct: 138 GDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTF 197

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+  LS  G L EA  L+ EMI RG  P   +  SL+    + G +DEA E+   ++ 
Sbjct: 198 MTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVA 257

Query: 249 R 249
           +
Sbjct: 258 K 258



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 107/244 (43%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  + D+ LY ++I G C     +    +L EM   G   +      L+D   K G   E
Sbjct: 118 KRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L + M  S      VTF  LI+ L   G + EA + +  M + G  P + V  +LI 
Sbjct: 178 AYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIF 237

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK   ++ A  ++  +  + +     AY +L+DGY K     + L L  +M E     
Sbjct: 238 ALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFP 297

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y  LV G SR   L +A  LF  +   G  P+     ++++  Y+   M+EA    
Sbjct: 298 DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF 357

Query: 244 NEMM 247
           +E +
Sbjct: 358 DEAL 361



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 1/190 (0%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL  L EM  + +   VV   ++++GLCK+  + +AI+ F  MP  G  P +  Y  +I
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GL   + ++ A   F+ M      PD  A+T LI G+ K    +    L N+  +    
Sbjct: 63  SGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-RFR 121

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  YTS++ G  + G L     +  EM+  G +PD      L+    + G +DEA EL
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYEL 181

Query: 243 QNEMMGRGLL 252
              M   G L
Sbjct: 182 FERMRKSGCL 191



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 6/242 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y  +I  LC   + +++  L   M+++G   + V   TL++A    G+  EA  L 
Sbjct: 158 DAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELY 217

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM++   E  +     LI  LCK+G V EA + +  +    +  +   Y +L+DG CK 
Sbjct: 218 REMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKL 277

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++    L  +M + D  PD   Y  L+ G+ +     +AL L   ++  G   +   Y
Sbjct: 278 GRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATY 337

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+++ GL     ++EA+  F E +      D I   +++K   +   +DEA EL  ++  
Sbjct: 338 TTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKT 391

Query: 249 RG 250
            G
Sbjct: 392 AG 393



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 122/314 (38%), Gaps = 64/314 (20%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      D   + T+I  L    K +++  L  EM E G      +  +L+ A  KAG+
Sbjct: 185 MRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGK 244

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV------------------------ 96
             EA  +   ++  ++  + V +  L+DG CK G V                        
Sbjct: 245 VDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNI 304

Query: 97  -----------REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE----- 140
                       +A++ F  +  +G  PN A YT +I GL     +E A+  FDE     
Sbjct: 305 LVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVI 364

Query: 141 ------------------------MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
                                   +      P+  AYTA+IDG LK    ++ L     M
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
           +          YT ++ GL +   L +A  +F +M+ +G +PD I   +L+    +   M
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484

Query: 237 DEAIELQNEMMGRG 250
           DEA +L + M+ +G
Sbjct: 485 DEARKLLDVMLTKG 498



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 1/157 (0%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + EA+D    M   GL P+V     +++GLCK   I++A  LF EMP     P   +Y  
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +I G    +   EA    N M + G + D+ A+T+L+ G  + G  Q   +L ++ + R 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             PD  L  S++  + + G++D   ++  EM+  G +
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCI 156


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 20/269 (7%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KNI  D+  +  ++  LC E K +++K  ++ M + G+  + V  ++LMD Y    E ++
Sbjct: 275 KNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNK 334

Query: 64  A--------------------LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           A                    LSL  EM   RI    VT+  LIDGLCKSG +  A +  
Sbjct: 335 AKHVYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELV 394

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
             M D G   ++  Y +LID LCK + +++A  L  ++  + +  D   Y  LIDG  K 
Sbjct: 395 DEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQ 454

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
              K+A  +   +   G +L +  YT ++ GL   G L EA  L  +M   G +PD + C
Sbjct: 455 GRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTC 514

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            ++++  +E    + A +L  EM+ RGLL
Sbjct: 515 ETIIRALFENDKNERAEKLLREMIARGLL 543



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 117/238 (49%), Gaps = 15/238 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC   +   +  +L +++   ++ + V+ +T++D   K    ++A  L  EM+
Sbjct: 179 YGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMI 238

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             RI  TVVT   LI G C  G  +EA      M    ++P+V  +  L+D LCK+  I+
Sbjct: 239 TKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIK 298

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A++    M K  ++PD   Y++L+DGY         +N  N+   V        Y+ ++
Sbjct: 299 EAKSGIAVMMKEGVMPDVVTYSSLMDGYC-------LVNEVNKAKHV--------YSIVI 343

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + +A  LF+EM  R I PD +   SL+    + G +  A EL +EM   G
Sbjct: 344 NGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSG 401



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 96/196 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           + +++ + G   NT+  TTL+  +    +  EAL   D +L        V++  LI+GLC
Sbjct: 128 IFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLC 187

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G  R A+    ++    +  +V +Y+ +IDGLCK   +  A  L+ EM  + + P   
Sbjct: 188 KIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVV 247

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
              +LI GY     FKEA  L   M    ++ D+  +  LV  L + G ++EA+     M
Sbjct: 248 TLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVM 307

Query: 212 IGRGILPDEILCISLL 227
           +  G++PD +   SL+
Sbjct: 308 MKEGVMPDVVTYSSLM 323



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 104/240 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G I+  L     +     L  +++ NG+  N V  + L++ Y   G+   A S+  ++L
Sbjct: 74  FGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIFAKIL 133

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   +T   L+ G C +  V+EA+ +   +   G H N   Y  LI+GLCK     
Sbjct: 134 KMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGETR 193

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +  ++  + +  D   Y+ +IDG  K +   +A  L + M    +   +    SL+
Sbjct: 194 AALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLI 253

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +G    G  +EA  L  EM+ + I PD      L+    + G + EA      MM  G++
Sbjct: 254 YGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVM 313



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 92/181 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  D   Y ++I GLC   +   +  L+ EM+++G  A+ +   +L+DA  K   
Sbjct: 362 MRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHH 421

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++L+ ++ D  I++ + T+ +LIDGLCK G +++A   F  +   G +  V  YT 
Sbjct: 422 VDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTI 481

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLC +  +  A  L  +M     +PD      +I    +++  + A  L   M   G
Sbjct: 482 MINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARG 541

Query: 181 V 181
           +
Sbjct: 542 L 542



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+     AD+  Y ++I  LC     + +  L+ ++K+ G+  +      L+D   K G 
Sbjct: 397 MRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGLCKQGR 456

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +  ++L     +TV T+ ++I+GLC  GL+ EA     +M D G  P+      
Sbjct: 457 LKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGCVPDAVTCET 516

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI 147
           +I  L + +  ERA  L  EM  R ++
Sbjct: 517 IIRALFENDKNERAEKLLREMIARGLL 543



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 84/171 (49%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           +V+ F  ++  L K       I  F ++   G+ PN+   + LI+  C    +  A ++F
Sbjct: 70  SVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSILINCYCHLGQMRFAFSIF 129

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
            ++ K    P+T   T L+ G+  +   KEAL+  + +  +G   +  +Y +L+ GL + 
Sbjct: 130 AKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKI 189

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           G  + A  +  ++ G+ +  D ++  +++    +   +++A EL +EM+ +
Sbjct: 190 GETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITK 240


>gi|255684956|gb|ACU27967.1| At1g03560-like protein [Arabidopsis thaliana]
 gi|255684958|gb|ACU27968.1| At1g03560-like protein [Arabidopsis thaliana]
          Length = 193

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 102/188 (54%), Gaps = 1/188 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +   M   G   N  I T L+  Y K+G   +A+ LL  M+D   +  VVT+ V+++GLC
Sbjct: 1   VFENMIRKGSKPNVAIYTVLIYGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V EA+DYF      GL  N   Y++LIDGL K   ++ A  LF+EM ++    D+ 
Sbjct: 61  KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            Y ALID + KH    EA+ L  RM  E G D  +  YT L+ G+ +    +EA  L+  
Sbjct: 121 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDM 180

Query: 211 MIGRGILP 218
           MI +GI P
Sbjct: 181 MIDKGITP 188



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 1/182 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K ++ +Y  +I+G       ED+  LL  M + G   + V  + +++   K G 
Sbjct: 5   MIRKGSKPNVAIYTVLIYGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGR 64

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL          + +  + +  LIDGL K+G V EA   F  M + G   +   Y A
Sbjct: 65  VEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNA 124

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTT-AYTALIDGYLKHESFKEALNLKNRMTEV 179
           LID   K   ++ A  LF  M + +    T   YT LI G  K    +EAL L + M + 
Sbjct: 125 LIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDK 184

Query: 180 GV 181
           G+
Sbjct: 185 GI 186



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 69/144 (47%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           F  M   G  PNVA+YT LI G  K   +E A  L   M      PD   Y+ +++G  K
Sbjct: 2   FENMIRKGSKPNVAIYTVLIYGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 61

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           +   +EAL+  +     G+ ++   Y+SL+ GL + G + EA  LF EM  +G   D   
Sbjct: 62  NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 121

Query: 223 CISLLKKHYERGNMDEAIELQNEM 246
             +L+    +   +DEAI L   M
Sbjct: 122 YNALIDAFTKHRKVDEAIALFKRM 145



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 1/154 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ GLC   + E++       + +GL  N++  ++L+D   KAG 
Sbjct: 40  MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGR 99

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
             EA  L +EM +         +  LID   K   V EAI  F RM  + G    V  YT
Sbjct: 100 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 159

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
            LI G+ K++  E A  L+D M  + + P    +
Sbjct: 160 ILISGMFKEHRNEEALKLWDMMIDKGITPTAACF 193



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 60/114 (52%)

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           +F+ M ++   P+   YT LI GY K  S ++A+ L +RM + G   D+  Y+ +V GL 
Sbjct: 1   VFENMIRKGSKPNVAIYTVLIYGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 60

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + G ++EA   FH     G+  + +   SL+    + G +DEA  L  EM  +G
Sbjct: 61  KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 114


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  ++ G   + K +++   L+ M + G   +   CT ++ A  + G 
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+    +M+D   +  ++ F  LIDGLCK G +++A +    M   G  PNV  +TA
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LIDGLCK+   E+A  LF ++ + D   P+   YT++I GY K +    A  L +RM E 
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  ++N YT+L+ G  + G    A  L + M   G +P+     + +    ++    EA
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447

Query: 240 IELQNEMMGRGL 251
            EL N+    GL
Sbjct: 448 YELLNKAFSCGL 459



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++    K ++  Y ++I G C E K   +++L S MKE GL  N    TTL++ + KAG 
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L++ M D      + T+   ID LCK     EA +   +    GL  +   YT 
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 468

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   CK+N I +A   F  M K     D      LI  + + +  KE+  L   +  +G
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTS++    + G +  A   FH M   G +PD     SL+    ++  +DEA 
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEAC 588

Query: 241 ELQNEMMGRGL 251
           +L   M+ RGL
Sbjct: 589 KLYEAMIDRGL 599



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 1/227 (0%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E ++ +  EM   G+  ++     ++   F+ G+  EA   L  M+         T  ++
Sbjct: 199 EYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLI 258

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           +  LC++GLV  AI YF +M D G  PN+  +T+LIDGLCKK  I++A  + +EM +   
Sbjct: 259 LTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV-DLDLNAYTSLVWGLSRCGHLQEAR 205
            P+   +TALIDG  K    ++A  L  ++        +++ YTS++ G  +   L  A 
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +LF  M  +G+ P+     +L+  H + G+   A EL N M   G +
Sbjct: 379 MLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFM 425



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 36/286 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K +L  + ++I GLC +   + +  +L EM  NG   N    T L+D   K G   +A 
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342

Query: 66  SLL-------------------------------DEMLDSRIE-----VTVVTFCVLIDG 89
            L                                 EML SR++       V T+  LI+G
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
            CK+G    A +    M D G  PN+  Y A ID LCKK+    A  L ++     +  D
Sbjct: 403 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 462

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              YT LI    K     +AL    RM + G + D+     L+    R   ++E+  LF 
Sbjct: 463 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 522

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            ++  G++P +    S++  + + G++D A++  + M   G +  S
Sbjct: 523 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 75/157 (47%)

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G + EA+     M + GL P+      +++   +   IE A N+FDEM  R ++PD+++Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             ++ G  +    +EA      M + G   D    T ++  L   G +  A   F +MI 
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  P+ I   SL+    ++G++ +A E+  EM+  G
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 92/192 (47%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++  + + G  +EA+ ++ +M +  +  + +T   +++   + GL+  A + F  M   G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+ + Y  ++ G  +   I+ A      M +R  IPD    T ++    ++     A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
               +M ++G   +L  +TSL+ GL + G +++A  +  EM+  G  P+     +L+   
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332

Query: 231 YERGNMDEAIEL 242
            +RG  ++A  L
Sbjct: 333 CKRGWTEKAFRL 344



 Score = 53.9 bits (128), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 59/144 (40%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     +AD+ L   +I   C + K ++S+ L   +   GL       T+++  Y K G+
Sbjct: 489 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 548

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL     M          T+  LI GLCK  +V EA   +  M D GL P       
Sbjct: 549 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 608

Query: 121 LIDGLCKKNCIERARNLFDEMPKR 144
           L    CK+N    A  L + + K+
Sbjct: 609 LAYEYCKRNDSANAMILLEPLDKK 632


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G C +   +D+  +L +    G   +     +L++ + K G+P  A+++  + L
Sbjct: 298 YNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGL 357

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  ++V +  LI GL + GL+  A+     M + G  PN+  Y  +I+GLCK  C+ 
Sbjct: 358 GKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVS 417

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L D+   +   PD   Y  LIDGY K      A  + NRM   G+  D+  Y +L+
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G  +E   +F  M  +G  P+ I    ++    +   ++EA++L  EM  +GL
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGL 536



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 9/261 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +++D+  Y   I   C  ++   +  LL  M E G  +N V   T++   + +GE
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L DEML   +   VV F  L+  LCK GLV E+    G++   G+ PN+  +  
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256

Query: 121 LIDGLCKKNCIERA----RNLFDEMPKRDMI-----PDTTAYTALIDGYLKHESFKEALN 171
            + GLC++  ++RA    R +  E   R M+     PD   Y ++IDGY K    ++A  
Sbjct: 257 FVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANR 316

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
           +       G   D   Y SL+ G  + G    A  +F + +G+G+ P  +L  +L+K   
Sbjct: 317 VLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLS 376

Query: 232 ERGNMDEAIELQNEMMGRGLL 252
           ++G +  A++L NEM   G L
Sbjct: 377 QQGLILPALQLMNEMAENGCL 397



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 99/209 (47%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK ++  + LY T+I GL  +     +  L++EM ENG   N      +++   K G  S
Sbjct: 358 GKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVS 417

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L+D+ +       + T+  LIDG CK   +  A +   RM   G+ P+V  Y  L+
Sbjct: 418 DASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLL 477

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +GLCK    E    +F  M ++   P+   Y  ++D   K +   EA++L   M   G+ 
Sbjct: 478 NGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLK 537

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            D+ ++ +L  G  + G +  A  LF  M
Sbjct: 538 PDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 1/222 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y T++ GLC   K E+   +   M+E G T N +    ++D+  KA +
Sbjct: 461 MWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKK 520

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
            +EA+ LL EM    ++  VV+F  L  G CK G +  A   F RM   + +    A Y 
Sbjct: 521 VNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYN 580

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            ++    ++  +  A  LF  M      PD   Y  +IDG+ K  +  +         E 
Sbjct: 581 IIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEK 640

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
                L  +  ++  L     + EA  + H M+ +GI+P+ +
Sbjct: 641 RFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV 682



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 34/239 (14%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+  L    +FE+ + LLSEM+EN   A       L  AY +A              
Sbjct: 43  YKCIVQKLGHHGEFEEMEKLLSEMRENVNNA------LLEGAYIEA-------------- 82

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                         +    + G V+EA+D F RM  +   P+V  + A+++ L +     
Sbjct: 83  --------------MKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHN 128

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  ++  M  R +  D   YT  I  + K      AL L   M E+G D +  AY ++V
Sbjct: 129 QAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVV 188

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL   G    AR LF EM+ R + PD +    L+    ++G + E+  L  +++ RG+
Sbjct: 189 AGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGV 247


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/209 (35%), Positives = 109/209 (52%), Gaps = 1/209 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +Y + I GLC   K +++K +  +M E G   + V    ++ +  K    SEA  L+
Sbjct: 186 DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELM 245

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDGLCK 127
           D+ ++ +    V    VL+DGLCKS  V EA     RM + G   P+V  Y+A+IDGLCK
Sbjct: 246 DQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCK 305

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
            + ++ A  +  +M +   +PD   YTA+ID + K     EA  L  RM E G   D+ A
Sbjct: 306 ADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVA 365

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           Y  L+ G  R   + EA  +  EM GRGI
Sbjct: 366 YNILIRGYCRAAKVDEAIAMIEEMAGRGI 394



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 125/252 (49%), Gaps = 3/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KG        LY T+I GLC   + E+++ L  EM   G   + ++ T+ +    KAG+
Sbjct: 145 LKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EMAA-GDVQDVIVYTSFISGLCKAGK 202

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++  +M+++      V++ V+I  LCK   V EA +   +  +    P V V T 
Sbjct: 203 LDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTV 262

Query: 121 LIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L+DGLCK   +E A  + + M +  D  P    Y+A+IDG  K +   +A  +  +M   
Sbjct: 263 LVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRA 322

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  YT+++    + G L EAR LF  M  RG   D +    L++ +     +DEA
Sbjct: 323 GCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEA 382

Query: 240 IELQNEMMGRGL 251
           I +  EM GRG+
Sbjct: 383 IAMIEEMAGRGI 394



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 2/246 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
            +K D  LY  +I  LC  +K + +     +M ++G   + V  T L+ + FKA +  + 
Sbjct: 44  KVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQG 103

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             + +EML       +VT+  +++G CK+G + +A+    R+   G  P+ ++Y+ LIDG
Sbjct: 104 HQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDG 163

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK +  E AR LF EM   D + D   YT+ I G  K     EA  +  +M E G   D
Sbjct: 164 LCKHDRHEEARELF-EMAAGD-VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPD 221

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
             +Y  +++ L +   + EA+ L  + + R  +P   +C  L+    +   ++EA  +  
Sbjct: 222 PVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE 281

Query: 245 EMMGRG 250
            M+  G
Sbjct: 282 RMLEAG 287



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 120/254 (47%), Gaps = 3/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +L  Y T++ G C   + + +  L+  +K  G + +  + +TL+D   K   
Sbjct: 110 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 169

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM    ++  V+ +   I GLCK+G + EA     +M + G  P+   Y  
Sbjct: 170 HEEARELF-EMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNV 227

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK N +  A+ L D+  +R  +P     T L+DG  K    +EA  +  RM E G
Sbjct: 228 IIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAG 287

Query: 181 VDL-DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
                +  Y++++ GL +   L +A ++  +M   G +PD +   +++    + G +DEA
Sbjct: 288 DRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEA 347

Query: 240 IELQNEMMGRGLLS 253
            EL   M  RG  S
Sbjct: 348 RELFQRMHERGCAS 361



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 2/219 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           LL EMK  G+T   V   +L+    +    ++AL +  +M+D +++     + V+I  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K   +  A  YF +M   G  P+   YT L+  L K    E+   +F+EM  +   P+  
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  +++GY K     +AL+L  R+   G     + Y++L+ GL +    +EAR LF   
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE-- 178

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G + D I+  S +    + G +DEA  +  +M+  G
Sbjct: 179 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAG 217



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 4/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAG 59
           MK   I   +  +G++I  LC E  F +  L +  +M +  +  +  + T ++    K  
Sbjct: 5   MKAAGITPTIVTFGSLIRKLC-ELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKIN 63

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +   A S  ++M+ S      VT+ VL+  L K+    +    F  M   G  P +  Y 
Sbjct: 64  KLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYA 123

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +++G CK   I++A +L   +      P  + Y+ LIDG  KH+  +EA  L       
Sbjct: 124 TVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE--MAA 181

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  YTS + GL + G L EA+ +  +MI  G  PD +    ++    +   + EA
Sbjct: 182 GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEA 241

Query: 240 IELQNEMMGRGLLSG 254
            EL ++ M R  + G
Sbjct: 242 KELMDQAMERKCMPG 256


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 133/255 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ADL  Y  +I  LC   +   + LLL  M+E  LT +     TL+  +F  G+
Sbjct: 290 MEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGK 349

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A+ + ++ML   ++ +V T+  LIDG C++G   EA      M   G+ P+   Y+A
Sbjct: 350 INLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSA 409

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK + +  A +L   +  R +  + T YT LIDG+ +     +A  +   M   G
Sbjct: 410 LLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADG 469

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D D+  Y++L+ G+ + G + E + +   M   G+LP+ +L  +L+    + G+  EA+
Sbjct: 470 IDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEAL 529

Query: 241 ELQNEMMGRGLLSGS 255
           +   ++   GL++ S
Sbjct: 530 KYFVDIYRSGLVANS 544



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 125/279 (44%), Gaps = 36/279 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+     ++  LC + K   ++ +L +MK N    N V   T+++ Y K G    AL +L
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMK-NCRLPNAVTYNTILNWYVKKGRCKSALRIL 287

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCK-----------------------------------S 93
           D+M  + IE  + T+ ++ID LCK                                    
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G +  AI  F +M    L P+VA YTALIDG C+    + AR +  EM    + P    Y
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           +AL++GY KH     AL+L   +    + ++   YT L+ G  + G + +A+ +   M+ 
Sbjct: 408 SALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLA 467

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GI PD I   +L+    + G + E  E+ + M   G+L
Sbjct: 468 DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVL 506



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 115/230 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ G C  SK   +  L+  ++   ++ N  + T L+D + + GE S+A  +L  ML
Sbjct: 407 YSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCML 466

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+  V+T+  LI+G+CK G++ E  +   RM   G+ PN  +YT L+   CK    +
Sbjct: 467 ADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAK 526

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F ++ +  ++ ++  + AL+  + +     EA   K  M+ + +  D+ ++  ++
Sbjct: 527 EALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCII 586

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
               + G++ EA  ++  M+  G  PD     SLL+   + G++ +A E 
Sbjct: 587 DSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEF 636



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 118/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  Y  +I G+C      ++K +LS M+++G+  N V+ TTL+  + KAG 
Sbjct: 465 MLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGH 524

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL    ++  S +    V    L+    + G++ EA  +   M    +  +VA +  
Sbjct: 525 AKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNC 584

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  C++  +  A +++D M +    PD   Y +L+ G  +     +A      + E  
Sbjct: 585 IIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKA 644

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +D     +L+ G+ + G L EA  L  +M+ R ILPD      LL    +RG +  A+
Sbjct: 645 CAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPAL 704

Query: 241 ELQNEMMGRGLL 252
            L   M+ +GL+
Sbjct: 705 ILLQMMLEKGLV 716



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 111/236 (47%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           LY T+++  C     +++     ++  +GL AN+VI   L+ ++++ G  +EA      M
Sbjct: 511 LYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYM 570

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
              +I   V +F  +ID  C+ G V EA   +  M   G  P++  Y +L+ GLC+   +
Sbjct: 571 SRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHL 630

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            +A+     + ++    D      L+ G  KH +  EAL+L  +M    +  D   YT L
Sbjct: 631 VQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTIL 690

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + G  + G +  A +L   M+ +G++PD I    LL      G +  A  +  E++
Sbjct: 691 LDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEII 746



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 118/283 (41%), Gaps = 36/283 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  YG+++ GLC       +K  +  + E     +     TL+    K G   EAL L 
Sbjct: 613 DICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLC 672

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M+   I     T+ +L+DG CK G V  A+     M + GL P+   YT L++GL  +
Sbjct: 673 EKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNE 732

Query: 129 NCIERARNLFDE------------------------------------MPKRDMIPDTTA 152
             ++ A  +F E                                    M + ++ P + +
Sbjct: 733 GQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSAS 792

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y  L+ GY+K       L L   M + G+  D   Y  L++GL   G ++ A     +M+
Sbjct: 793 YNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMV 852

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             G+ PD +    L+K   E+  M  A++L + M   G + G+
Sbjct: 853 LEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGA 895



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 51/301 (16%)

Query: 8    ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
            AD   Y +++ G     +  + + L+  M EN +  ++     LM  Y K G+ S  L L
Sbjct: 753  ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYL 812

Query: 68   LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PD------------- 108
              +M+   I+   VT+ +LI GLC+ GL+  A+ +  +M      PD             
Sbjct: 813  YRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSE 872

Query: 109  --------------------------------FGLHPNVAVYTALIDGLCKKNCIERARN 136
                                             G+ P+    ++++ GLCK   +E A  
Sbjct: 873  KSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAII 932

Query: 137  LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
            +F  + +  M+P    +T L+ G  K     +A +LK  M   G+ +D+  Y  L+ GL 
Sbjct: 933  VFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLC 992

Query: 197  RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
                + +A  L+ EM  +G+LP+    I+L    Y  G M +  +L  ++  RG++   K
Sbjct: 993  NKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYK 1052

Query: 257  N 257
            +
Sbjct: 1053 H 1053



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 16/235 (6%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  + IK D   Y  +I+GLC     E +   L +M   G+  + +    L+ A+ +  +
Sbjct: 816  MVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSK 875

Query: 61   PSEALSLLDEM-----LDSRIEV-----------TVVTFCVLIDGLCKSGLVREAIDYFG 104
             S AL L   M     +D   E+           + V    ++ GLCK G V EAI  F 
Sbjct: 876  MSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFS 935

Query: 105  RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
             +   G+ P +A +T L+ GLCK+  I+ A +L   M    +  D   Y  LI G    +
Sbjct: 936  SIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKK 995

Query: 165  SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
               +AL+L   M   G+  ++  Y +L   +   G +Q+   L  ++  RGI+P 
Sbjct: 996  CICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 109/252 (43%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  +  II   C      ++  +   M  +G   +     +L+    + G 
Sbjct: 570 MSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGH 629

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A   +  +L+    +   T   L+ G+CK G + EA+D   +M    + P+   YT 
Sbjct: 630 LVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTI 689

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA-LNLKNRMTEV 179
           L+DG CK+  +  A  L   M ++ ++PDT AYT L++G +     K A    +  + + 
Sbjct: 690 LLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 749

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D  AY S++ G  + G + E   L   M    + P       L+  + ++G +   
Sbjct: 750 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 809

Query: 240 IELQNEMMGRGL 251
           + L  +M+  G+
Sbjct: 810 LYLYRDMVKEGI 821



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 4/184 (2%)

Query: 10   LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
            L L+  + W   I+  FE    L  +MK  G+  + V  ++++    K G+  EA+ +  
Sbjct: 880  LQLFSYMKWVGDIDGAFE----LKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFS 935

Query: 70   EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
             ++ + +  T+ TF  L+ GLCK   + +A      M   GL  +V  Y  LI GLC K 
Sbjct: 936  SIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKK 995

Query: 130  CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            CI  A +L++EM  + ++P+ T Y  L        + ++   L   + + G+        
Sbjct: 996  CICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPE 1055

Query: 190  SLVW 193
            SL W
Sbjct: 1056 SLEW 1059


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 122/241 (50%), Gaps = 8/241 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVIC-------TTLMDAYFKAGEPSEAL 65
           YGT+I GLC       +  L  EM  NG +   + C         ++D   K G+  EA 
Sbjct: 199 YGTLIKGLCRTGNINLALKLHQEML-NGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAK 257

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +EM+D  +   VVTF  LID LCK G+V EA  +   M   G+ P++  +T+LI+G 
Sbjct: 258 RLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGF 317

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    ++ A+ LF  MP +   PD  +YT LI GY K  + +EA+ L N M  VG   D+
Sbjct: 318 CLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDM 377

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +  L+ GL   G + +A+ LF  +    +  +  +C   L    + G + EA+EL NE
Sbjct: 378 KTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNE 437

Query: 246 M 246
           +
Sbjct: 438 L 438



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 121/246 (49%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I  DL  + ++I G C+    + +K L   M   G   + +  T L+  Y K     E
Sbjct: 301 RGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEE 360

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ L +EML       + TFCVL+ GL  +G V +A   FG +    +  N+ + +  +D
Sbjct: 361 AMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLD 420

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK  C+  A  LF+E+   +M  D  ++  LIDG  K    + A  L  ++++ G+  
Sbjct: 421 GLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQP 480

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y  ++ G  + G +  A +LF  M   G  P+ +   +LL   Y+   ++E ++L 
Sbjct: 481 DVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLL 540

Query: 244 NEMMGR 249
           ++M+ +
Sbjct: 541 HKMIQK 546



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 95/181 (52%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +  ++ GL +  K  D+K L   +K + +  N  IC+  +D   K G   EA+ L 
Sbjct: 376 DMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELF 435

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +E+    +++ + +F  LIDGLCK+  +  A + F ++   GL P+V  Y  +I+G CK 
Sbjct: 436 NELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKN 495

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  LF  M +    P+   Y+AL+ G+ K+   +E + L ++M +  V L  + Y
Sbjct: 496 GQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIY 555

Query: 189 T 189
           T
Sbjct: 556 T 556



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 117/270 (43%), Gaps = 35/270 (12%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N K ++  Y  II  LC   K++++K L +EM + G+  + V  + L+D   K G   EA
Sbjct: 232 NCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEA 291

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
              L+ M+   I   + TF  LI+G C  G +  A + F  MP  G  P+V  YT LI G
Sbjct: 292 KKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYG 351

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTAL---------------------------- 156
            CK   +E A  L++EM +    PD   +  L                            
Sbjct: 352 YCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKN 411

Query: 157 -------IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
                  +DG  K+    EA+ L N +    + LD+ ++  L+ GL +   L+ A  LF 
Sbjct: 412 LYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFE 471

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEA 239
           ++   G+ PD +    ++    + G +D A
Sbjct: 472 KLSQEGLQPDVVTYCIMINGFCKNGQVDNA 501



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 104/216 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + D+  Y  +I+G C     E++  L +EM   G   +      L+   F AG+
Sbjct: 333 MPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGK 392

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L   +    +   +    V +DGLCK+G + EA++ F  +  + +  ++  +  
Sbjct: 393 VGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNC 452

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  LF+++ +  + PD   Y  +I+G+ K+     A  L   M E G
Sbjct: 453 LIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENG 512

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
              +L  Y++L+ G  +   L+E   L H+MI + +
Sbjct: 513 CTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDV 548



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 103/225 (45%), Gaps = 6/225 (2%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M   GL+ N      L++         E LS +  ++       VVT+  LI GLC
Sbjct: 113 LYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLC 172

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM-----PKR-D 145
               + EA   F RM   G  PNV  Y  LI GLC+   I  A  L  EM     P   +
Sbjct: 173 MEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAIN 232

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+  +Y  +ID   K   +KEA  L N M + GV  D+  +++L+  L + G + EA+
Sbjct: 233 CKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAK 292

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
                M+ RGI+PD     SL++     G++D A EL   M  +G
Sbjct: 293 KFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKG 337



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 108/237 (45%), Gaps = 6/237 (2%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           LC  ++  +    ++ +   G   + V  T+L+         SEA  L   M        
Sbjct: 136 LCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPN 195

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPD------FGLHPNVAVYTALIDGLCKKNCIER 133
           VVT+  LI GLC++G +  A+     M +          PN+  Y  +ID LCK    + 
Sbjct: 196 VVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKE 255

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A+ LF+EM  + + PD   ++ALID   K     EA      M   G+  DL  +TSL+ 
Sbjct: 256 AKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIE 315

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           G    G L  A+ LF  M  +G  PD I    L+  + +  N++EA++L NEM+  G
Sbjct: 316 GFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVG 372



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 6/208 (2%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+ A  K    S+  SL  +M  + +     T  +LI+ LC    VRE +     +   G
Sbjct: 97  LLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRG 156

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+V  YT+LI GLC ++ I  A  LF  M K    P+   Y  LI G  +  +   AL
Sbjct: 157 YIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLAL 216

Query: 171 NLKNRMTE------VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
            L   M        +    ++ +Y  ++  L + G  +EA+ LF+EM+ +G+ PD +   
Sbjct: 217 KLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFS 276

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +L+    + G + EA +    MM RG++
Sbjct: 277 ALIDTLCKEGMVIEAKKFLETMMLRGIV 304



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 85/176 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K   +  +L +    + GLC      ++  L +E+K   +  +      L+D   KA +
Sbjct: 403 VKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARK 462

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L +++    ++  VVT+C++I+G CK+G V  A   F  M + G  PN+  Y+A
Sbjct: 463 LETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSA 522

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           L+ G  K N +E    L  +M ++D+    + YT + D   K E  +E L++  R 
Sbjct: 523 LLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRF 578



 Score = 73.9 bits (180), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 13/197 (6%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           ++AL   D M+ S     +++F +L+  L K     +    + +M   GL PN      L
Sbjct: 78  TQALQFFDLMMRS-----IISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNIL 132

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+ LC  N +    +    + +R  IPD   YT+LI G        EA  L  RM ++G 
Sbjct: 133 INCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGC 192

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS-------LLKKHYERG 234
             ++  Y +L+ GL R G++  A  L  EM+  G  P  I C         ++ +  + G
Sbjct: 193 WPNVVTYGTLIKGLCRTGNINLALKLHQEMLN-GTSPYAINCKPNIFSYNIIIDELCKIG 251

Query: 235 NMDEAIELQNEMMGRGL 251
              EA  L NEM+ +G+
Sbjct: 252 KWKEAKRLFNEMVDQGV 268



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 51/102 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  Y  +I G C   + +++ +L   M+ENG T N +  + L+  ++K  +  E +
Sbjct: 478 LQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVV 537

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
            LL +M+   + +    + ++ D + K    RE +D   R P
Sbjct: 538 KLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRFP 579


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 128/240 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GL +E+K E +++L+ E++E G+  ++V    +++ Y + G+  +A +L DEM+
Sbjct: 366 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMM 425

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+ T  T+  LI  LC+    REA + F ++   G+ P++ +   L+DG C    ++
Sbjct: 426 TDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMD 485

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA +L  EM + ++ PD   Y  L+ G      F+EA  L   M   G+  D  +Y +L+
Sbjct: 486 RAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 545

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G S+ G  + A ++  EM+  G  P  +   +LLK   +  + + A EL  EM   G++
Sbjct: 546 SGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIV 605



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 121/246 (49%), Gaps = 3/246 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   IK  +  Y T++ G  +  + E +++++SEMK  G   +      ++      G 
Sbjct: 252 MESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR 311

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SE   +L EM    +    V++ +LI G   +G +  A  Y   M   G+ P    Y  
Sbjct: 312 ASE---VLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNT 368

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL  +N IE A  L  E+ ++ ++ D+  Y  +I+GY +H   K+A  L + M   G
Sbjct: 369 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDG 428

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTSL++ L R    +EA  LF +++G+G+ PD ++  +L+  H   GNMD A 
Sbjct: 429 IKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAF 488

Query: 241 ELQNEM 246
            L  EM
Sbjct: 489 SLLKEM 494



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG  +  D   Y  +I G       E +     EM + G+        TL+   F   +
Sbjct: 319 MKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 378

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+ E+ +  I +  VT+ ++I+G C+ G  ++A      M   G+ P    YT+
Sbjct: 379 IEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTS 438

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC++N    A  LF+++  + M PD      L+DG+    +   A +L   M  + 
Sbjct: 439 LIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMN 498

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D D   Y  L+ GL   G  +EAR L  EM  RGI PD I   +L+  + ++G+   A 
Sbjct: 499 IDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 558

Query: 241 ELQNEMMGRGL 251
            +++EM+  G 
Sbjct: 559 IVRDEMLSLGF 569



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 32/248 (12%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           MKE G    T  C  ++    +      A     +M    I+  V TF ++I+ LCK G 
Sbjct: 182 MKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 241

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR----------- 144
           +++A  + G M  FG+ P +  Y  L+ G   +  IE AR +  EM  +           
Sbjct: 242 LKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNP 301

Query: 145 ---------------------DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
                                 ++PD+ +Y  LI G   +   + A   ++ M + G+  
Sbjct: 302 ILSWMCNEGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVP 361

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
               Y +L+ GL     ++ A +L  E+  +GI+ D +    ++  + + G+  +A  L 
Sbjct: 362 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALH 421

Query: 244 NEMMGRGL 251
           +EMM  G+
Sbjct: 422 DEMMTDGI 429



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 91/197 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    IK     Y ++I+ LC  +K  ++  L  ++   G+  + V+  TLMD +   G 
Sbjct: 424 MMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGN 483

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A SLL EM    I+   VT+  L+ GLC  G   EA +  G M   G+ P+   Y  
Sbjct: 484 MDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNT 543

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  KK   + A  + DEM      P    Y AL+ G  K++  + A  L   M   G
Sbjct: 544 LISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEG 603

Query: 181 VDLDLNAYTSLVWGLSR 197
           +  + +++ S++  +S+
Sbjct: 604 IVPNDSSFCSVIEAMSK 620



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 74/163 (45%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK +K DL +  T++ G C     + +  LL EM    +  + V    LM      G+  
Sbjct: 461 GKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFE 520

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA  L+ EM    I+   +++  LI G  K G  + A      M   G +P +  Y AL+
Sbjct: 521 EARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALL 580

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            GL K    E A  L  EM    ++P+ +++ ++I+   K ++
Sbjct: 581 KGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 66/129 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   NI  D   Y  ++ GLC E KFE+++ L+ EMK  G+  + +   TL+  Y K G+
Sbjct: 494 MDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGD 553

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + DEML      T++T+  L+ GL K+     A +    M   G+ PN + + +
Sbjct: 554 TKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCS 613

Query: 121 LIDGLCKKN 129
           +I+ + K +
Sbjct: 614 VIEAMSKSD 622



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 3/163 (1%)

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L +   +  A  ++  M    +  NV  +  +I+ LCK+  +++A+     M    + P 
Sbjct: 201 LSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPT 260

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  L+ GY      + A  + + M   G   DL  Y  ++  +   G   E   +  
Sbjct: 261 IVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASE---VLR 317

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           EM G G++PD +    L++     G+++ A   ++EM+ +G++
Sbjct: 318 EMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMV 360


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 120/247 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
            +P+Y  +I G+C E  FE++  LL EM   G+  N +  TT+++A   AG    +L++L
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVL 304

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M        + TF  LI G    G   EA+D++ RM   G+ PNV  Y AL+ GLC K
Sbjct: 305 AKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSK 364

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A ++F++M      P+   Y+ALIDGY K      A  + N M   G   ++ AY
Sbjct: 365 RSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAY 424

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T +V  L R     +A  L   M      P+ +   + +K     G +D AI++ ++M  
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484

Query: 249 RGLLSGS 255
            G    +
Sbjct: 485 SGCFPNT 491



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 114/234 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC +    D+  + ++M+ NG   N    + L+D Y KAG+   A  + + M+
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VV +  ++D LC++ +  +A      M      PN   +   I GLC    ++
Sbjct: 414 THGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVD 473

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +FD+M      P+TT Y  L+D  LK   F EA  L   M   G++L+L  Y +++
Sbjct: 474 WAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTII 533

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +G    G L EA  L  +M+ RG  PD I    ++  + ++G ++ AI+L + +
Sbjct: 534 YGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRL 587



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 30/279 (10%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K+ K     Y  +I  L  E + +  + LL +MK  G++ +  +  +++ +Y +AG   +
Sbjct: 70  KSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQ 129

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL     M D R++ TV  +  ++D L      +     +  M   G+ PNV  Y  L+ 
Sbjct: 130 ALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLK 189

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYT----------------------------- 154
            LCK N ++ A  L  EM  +   PD  +YT                             
Sbjct: 190 ALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVY 249

Query: 155 -ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
            ALI+G  K  +F+EA  L + M   G+D ++ +YT+++  LS  G+++ +  +  +M  
Sbjct: 250 NALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFA 309

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           RG  P+     SL+K  + +G   EA++  + M+  G++
Sbjct: 310 RGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVV 348



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 5/246 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K  + +Y  I+  L  E++F+    + S MK++G+  N      L+ A  K   
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM     +   V++  LI  LCK G V+EA     R       P+V VY A
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----RELAMSFTPSVPVYNA 251

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G+CK+   E A  L DEM  + + P+  +YT +I+      + + +L +  +M   G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L+ +TSL+ G    G   EA   +  MI  G++P+ +   +L+     + ++ +A+
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371

Query: 241 ELQNEM 246
            + N+M
Sbjct: 372 SVFNQM 377



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 5/250 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   ++ ++  Y  ++  LC  ++ + +  LL EM   G   + V  TTL+ +  K G+
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L      S     V  +  LI+G+CK     EA      M + G+ PNV  YT 
Sbjct: 232 VKEARELAMSFTPS-----VPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ L     +E +  +  +M  R   P+   +T+LI G+       EAL+  +RM   G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++ AY +L+ GL     L +A  +F++M   G  P+     +L+  + + G++D A 
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 241 ELQNEMMGRG 250
           E+ N M+  G
Sbjct: 407 EVWNWMITHG 416



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 110/251 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y TII  L      E S  +L++M   G + N    T+L+  +F  G 
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL   D M+   +   VV +  L+ GLC    + +A+  F +M   G  PNV  Y+A
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   ++ A  +++ M      P+  AYT ++D   ++  F +A  L   M    
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + + + GL   G +  A  +F +M   G  P+      LL    +     EA 
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511

Query: 241 ELQNEMMGRGL 251
            L  +M  RG+
Sbjct: 512 GLVKDMEHRGI 522



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 1/201 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N   +   + T I GLC   + + +  +  +M  +G   NT     L+D+  K   
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+ +M    IE+ +VT+  +I G C +G++ EA++  G+M   G  P+      
Sbjct: 507 FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNI 566

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  CK+  +  A  L D +      PD  AYT+LI G   H   +EA+    RM   G
Sbjct: 567 VIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEG 626

Query: 181 VDLDLNAYTSLVWGL-SRCGH 200
           +  ++  +  LV  L S  GH
Sbjct: 627 ISPNVATWNVLVRHLFSNMGH 647



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 4/241 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC  S F  +  L+  M+      NTV   T +     +G    A+ + D+M 
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMG 483

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S       T+  L+D L K     EA      M   G+  N+  Y  +I G C    + 
Sbjct: 484 NSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLG 543

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  +M  R   PD      +ID Y K      A+ L +R++      D+ AYTSL+
Sbjct: 544 EALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLI 603

Query: 193 WGLSRCGHL--QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G+  C H+  +EA V    M+  GI P+      L++  +       A++  + ++G G
Sbjct: 604 SGI--CTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSG 661

Query: 251 L 251
            
Sbjct: 662 F 662


>gi|125606474|gb|EAZ45510.1| hypothetical protein OsJ_30168 [Oryza sativa Japonica Group]
          Length = 651

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 2/254 (0%)

Query: 1   MKGKNIKADLP--LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
           M+ + +  D+P   Y  +I  LC + K  +   +   M + G  AN  I T L+D+  K 
Sbjct: 365 MEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKF 424

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G   EA++L + M DS +++  VT+ V+++ LC+ G + EA+  F    + G+  N   Y
Sbjct: 425 GREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFY 484

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           T+LIDG  K   +++++ LF+EM  +  +PD+  Y  LIDG  K     +A  L  RM +
Sbjct: 485 TSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMED 544

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G D  +  YT L+ GL +    +EA   +  MI +GI P      +L       G    
Sbjct: 545 DGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSR 604

Query: 239 AIELQNEMMGRGLL 252
           A  + +E+   G++
Sbjct: 605 ACRILDELAPMGVI 618



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 3/245 (1%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEPSE 63
            ++ D+  Y  +I G C   +  D+   LSEM+E   LT + V   TLM  ++  G    
Sbjct: 298 QVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPV 357

Query: 64  ALSLLDEMLDSRI--EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            + L  EM +  +  ++    + ++I  LCK G   E +  F RM   G   N A+YTAL
Sbjct: 358 CIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL 417

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ID + K    + A  LF+ M    +  D+  Y  +++   +     EA+       E G+
Sbjct: 418 IDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGI 477

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            ++   YTSL+ G  + G + +++ LF EMI +G +PD      L+    + G MD+A  
Sbjct: 478 AVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACA 537

Query: 242 LQNEM 246
           L   M
Sbjct: 538 LYKRM 542



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD-SRIEVTVVTFCVLIDGLCKSGLV 96
           E+ +  + V    L+  Y +AG   +A++ L EM + +++    VT+  L+      G  
Sbjct: 296 EDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTF 355

Query: 97  REAIDYFGRMPDFGLHPNVA--VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
              I  F  M + G+  ++    Y  +I  LCK         +F+ M KR    +   YT
Sbjct: 356 PVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYT 415

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           ALID   K    KEA+ L  RM + G+ LD   Y  +V  L R G L EA   F     +
Sbjct: 416 ALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEK 475

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           GI  + I   SL+    + G +D++ EL  EM+ +G +  S
Sbjct: 476 GIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDS 516



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 1/171 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  +   Y ++I G       + SK L  EM   G   ++     L+D   K+G   +
Sbjct: 475 KGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDD 534

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A +L   M D   + TV T+ +LIDGL K     EA+ ++  M D G+ P  A +  L  
Sbjct: 535 ACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLAS 594

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           GLC      RA  + DE+    +IP+ TA+  +I+   K   FK+A  L +
Sbjct: 595 GLCLSGKFSRACRILDELAPMGVIPE-TAHEDMINVLCKAGRFKQACKLAD 644



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 8/230 (3%)

Query: 30  KLLLSEMKENGLTA----NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           + L++E++ +G TA          +L+ +    G   E L     M  + +E + + +  
Sbjct: 213 RQLVAELRAHGDTALRHLTPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNC 272

Query: 86  LIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           L+DGL  +GL+  A++ F  M  +  + P+V  Y  LI G C+      A     EM ++
Sbjct: 273 LLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQ 332

Query: 145 -DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV--DLDLNAYTSLVWGLSRCGHL 201
             + PD   Y  L+  +    +F   + L   M E G+  D+  +AY  ++  L + G  
Sbjct: 333 AKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKP 392

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            E   +F  M+ RG   +  +  +L+    + G   EA+ L   M   GL
Sbjct: 393 FEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALFERMKDSGL 442



 Score = 60.1 bits (144), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 1/139 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y  +I GL    + +D+  L   M+++G        T L+D  FK  +
Sbjct: 507 MIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMEDDGCDQTVYTYTILIDGLFKEHK 566

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL   D M+D  I  T   F  L  GLC SG    A      +   G+ P  A +  
Sbjct: 567 NEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSRACRILDELAPMGVIPETA-HED 625

Query: 121 LIDGLCKKNCIERARNLFD 139
           +I+ LCK    ++A  L D
Sbjct: 626 MINVLCKAGRFKQACKLAD 644


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 129/253 (50%), Gaps = 2/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIE-SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M  K + A++  Y  +I G C +  ++E++  LL EM+ENG+  + +  ++ + A  K G
Sbjct: 317 MPTKGVVANIITYSIVI-GACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKG 375

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  EA+ LL EM    +    +++ ++I    K G  REAID    M   G+ P+V  Y+
Sbjct: 376 QWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYS 435

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A ID   + +  E+A  L  EMP   + P+  +Y + ID   K    K A+ L   M   
Sbjct: 436 AAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAH 495

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D+  Y++++   +     +EA  LF EM  +GI PD + C + +    + G  +EA
Sbjct: 496 GLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEA 555

Query: 240 IELQNEMMGRGLL 252
           +++  EM   GL+
Sbjct: 556 LDVLGEMPTMGLV 568



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG+ +K ++ +Y   I       ++E +  LL EM   GL  + +  +T++DA  K G+
Sbjct: 247 MKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQ 306

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM    +   ++T+ ++I    K G   EA+     M + G+ P+V  Y++
Sbjct: 307 WEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSS 366

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I    KK   E A  L  EMP   + P+  +Y  +I    K   ++EA++L   M   G
Sbjct: 367 TISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHG 426

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y++ +   ++    ++A  L  EM   G+ P+ I   S +    + G    A+
Sbjct: 427 VPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAV 486

Query: 241 ELQNEMMGRGL 251
           EL  EM   GL
Sbjct: 487 ELLREMPAHGL 497



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 115/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +K D   Y + I       ++E +  LL+ M   G   + +  ++ + A  K   
Sbjct: 177 MQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSR 236

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL  M    ++  V+ +   I    K G    A+D    MP  GL P+V  Y+ 
Sbjct: 237 WKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYST 296

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID   K+   E A  L  EMP + ++ +   Y+ +I    K   ++EA+ L   M E G
Sbjct: 297 VIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENG 356

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y+S +   ++ G  +EA  L  EM   G+ P+ I    ++    +RG   EAI
Sbjct: 357 VAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAI 416

Query: 241 ELQNEMMGRGL 251
           +L  EM   G+
Sbjct: 417 DLLQEMQAHGV 427



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y T+I       ++E +  LL EM   G+ AN +  + ++ A  K G+
Sbjct: 282 MPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQ 341

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++LL EM ++ +   V+T+   I    K G   EA+     MP  G+ PN   Y  
Sbjct: 342 WEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGI 401

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I    K+     A +L  EM    + PD   Y+A ID   +   +++AL L   M   G
Sbjct: 402 VISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATG 461

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++ +Y S +   ++ G  + A  L  EM   G+ PD I   +++         +EA+
Sbjct: 462 LTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEAL 521

Query: 241 ELQNEMMGRGL 251
           +L  EM  +G+
Sbjct: 522 DLFREMQRQGI 532



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 112/251 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D+  Y   I      S++E +  LL EM   GLT N +   + +DA  K G 
Sbjct: 422 MQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGR 481

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ LL EM    +   V+T+  +I          EA+D F  M   G+ P+V     
Sbjct: 482 SKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNT 541

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+   +    E A ++  EMP   ++PD  +Y   ID   K + +KE ++L   M+ VG
Sbjct: 542 AINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVG 601

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D  +Y   +   S  G  +EA VL  +M+  G+ PD +   S +    + G   EA 
Sbjct: 602 LTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEAT 661

Query: 241 ELQNEMMGRGL 251
            L  +M   GL
Sbjct: 662 VLLRQMPTFGL 672



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 113/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D+  Y + I     + ++E++  LL EM   G+T N +    ++ A  K G 
Sbjct: 352 MQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGR 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL EM    +   V+ +   ID   ++    +A+     MP  GL PNV  Y +
Sbjct: 412 WREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNS 471

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            ID   K    + A  L  EMP   + PD   Y+A+I        ++EAL+L   M   G
Sbjct: 472 AIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQG 531

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ +  + +   ++ G  +EA  +  EM   G++PD I   + +    +     E I
Sbjct: 532 ITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEII 591

Query: 241 ELQNEMMGRGL 251
           +L  EM   GL
Sbjct: 592 DLLREMSTVGL 602



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 110/251 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y + I      S+++++  LL  MK  G+  N ++ +  + A  K G+
Sbjct: 212 MAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQ 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ LL EM    +   V+T+  +ID   K G    A      MP  G+  N+  Y+ 
Sbjct: 272 WETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSI 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I    K    E A  L  EM +  + PD   Y++ I    K   ++EA+ L   M   G
Sbjct: 332 VIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEG 391

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +  +Y  ++   ++ G  +EA  L  EM   G+ PD I   + +    +    ++A+
Sbjct: 392 VTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQAL 451

Query: 241 ELQNEMMGRGL 251
            L  EM   GL
Sbjct: 452 WLLREMPATGL 462



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 99/220 (45%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L  M+E G+  ++   ++ + A   A +   A+ LL  M        V+T+   I    
Sbjct: 173 VLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACA 232

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K    +EA+     M   G+ PNV VY+A I    K    E A +L  EMP   + PD  
Sbjct: 233 KVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVI 292

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ +ID   K   ++ A  L   M   GV  ++  Y+ ++   ++ G  +EA  L  EM
Sbjct: 293 TYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREM 352

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              G+ PD I   S +    ++G  +EA+ L  EM   G+
Sbjct: 353 QENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGV 392



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 18/250 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y  +I    +  ++E++  L  EM+  G+T + V C T ++A  + G 
Sbjct: 492 MPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGW 551

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-- 118
             EAL +L EM    +    +++   ID   K    +E ID    M   GL P+   Y  
Sbjct: 552 WEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRF 611

Query: 119 ---TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
                 +DGL K+  +     L  +M    + PD   Y + I+   K   +KEA  L  +
Sbjct: 612 AMSACSVDGLWKEALV-----LLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQ 666

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQE----ARVLFHEMIGRGILPDEILCISLLKKHY 231
           M   G+  D+N++ + +     CG+  +      VLF EM   G+ P+E   ++ +    
Sbjct: 667 MPTFGLAPDVNSFNAAI---DACGNGDQWGTAVEVLF-EMRALGVSPNEATYLTAMYACK 722

Query: 232 ERGNMDEAIE 241
             G  D+ ++
Sbjct: 723 RCGEKDDWMQ 732



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 73/160 (45%)

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G  R+A+D   RM + G+ P+   Y++ I         ERA  L   M  R   PD   Y
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           ++ I    K   +KEA+ L   M   GV  ++  Y++ +    + G  + A  L  EM  
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
            G+ PD I   +++    +RG  + A  L  EM  +G+++
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVA 324



 Score = 41.6 bits (96), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 41/90 (45%)

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           ++  +++AL++ +RM E GV  D   Y+S +         + A  L   M  RG  PD +
Sbjct: 163 QYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVL 222

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              S +    +     EA+ L   M G+G+
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRSMKGQGV 252


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 129/246 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  +L  Y  ++  LC + + +D+  +  EM+E G++ N V   TL+    +  +
Sbjct: 259 MQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  ++D+M    I   ++T+  LIDG C  G + +A+     +   GL P++  Y  
Sbjct: 319 ANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNV 378

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+K     A  +  EM +R + P    YT LID + + ++ + A+ L++ M E+G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELG 438

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D++ Y+ L+ G    G + EA  LF  M+ + + P+E++  +++  + + G+   A+
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRAL 498

Query: 241 ELQNEM 246
            L  +M
Sbjct: 499 RLFRDM 504



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 117/244 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y T+I G C + + E +K L  EM + GL AN    T L+   FK G   +   + 
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMY 256

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M +  +   + T+  +++ LCK G  ++A   F  M + G+  N+  Y  LI GLC++
Sbjct: 257 EKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A  + D+M    + P+   Y  LIDG+       +AL+L   +   G+   L  Y
Sbjct: 317 MKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTY 376

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             LV G  R G    A  +  EM  RGI P ++    L+       NM+ AI+L++ M  
Sbjct: 377 NVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEE 436

Query: 249 RGLL 252
            GL+
Sbjct: 437 LGLV 440



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 122/243 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +G +I G C   + E S  LL E++E G + N VI TTL+D   K GE  +A  L 
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM    +     T+ VLI GL K+G+ ++  + + +M + G+ PN+  Y  +++ LCK 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + A  +FDEM +R +  +   Y  LI G  +     EA  + ++M    ++ +L  Y
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G    G L +A  L  ++  RG+ P  +    L+     +G+   A ++  EM  
Sbjct: 342 NTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE 401

Query: 249 RGL 251
           RG+
Sbjct: 402 RGI 404



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 110/223 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  +L  Y T+I G C   K   +  L  ++K  GL+ + V    L+  + + G+
Sbjct: 329 MKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGD 388

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  ++ EM +  I+ + VT+ +LID   +S  +  AI     M + GL P+V  Y+ 
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSV 448

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C K  +  A  LF  M ++ + P+   Y  +I GY K  S   AL L   M E  
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKE 508

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
           +  ++ +Y+ L+  L +   L+EA  L  +MI  GI P + +C
Sbjct: 509 LAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTIC 551



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 5/212 (2%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K    LY  II         + S    +EM + G    +     L+     +   ++   
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC 150

Query: 67  LLDEMLDSRIEVT--VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             +E   S+I+V   V +F ++I G C++G + ++ D    + +FG  PNV +YT LIDG
Sbjct: 151 FFNE---SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CKK  IE+A++LF EM K  ++ +   YT LI G  K+   K+   +  +M E GV  +
Sbjct: 208 CCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPN 267

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           L  Y  ++  L + G  ++A  +F EM  RG+
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFKVFDEMRERGV 299


>gi|414590862|tpg|DAA41433.1| TPA: hypothetical protein ZEAMMB73_769800 [Zea mays]
          Length = 1295

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 122/231 (52%), Gaps = 1/231 (0%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y  I+ G C     +    L  +M  + +  +    T+L+ A  +     +AL + + ML
Sbjct: 1045 YSIILHGCCQHLDLKAISDLWFDMIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELML 1104

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYTALIDGLCKKNCI 131
            ++ +   +VT  +L+D   K GLV EA  +  RM    G+ PN+ +Y  +I+GLCK N  
Sbjct: 1105 ENGLSPNIVTCTILVDSFSKQGLVGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKY 1164

Query: 132  ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
                N+F +M KR  +PD   Y+ +I+G++K    +EAL L ++M + GV  ++  Y+SL
Sbjct: 1165 SGVWNVFADMIKRGYVPDVVLYSIIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSL 1224

Query: 192  VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            + GL     L EA  L  +MIG  +L D +L  S++  +  R NM  A+E+
Sbjct: 1225 INGLCNDDRLPEAMGLIRDMIGEDLLLDNVLYTSIIACYCRRLNMKAAMEM 1275



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 113/246 (45%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+   ++ +   YGT ++GLC   +   +   L  + ++G   +      ++  +   G+
Sbjct: 893  MESNGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQ 952

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              +A+ +   M        V ++ +L+DGLCK G + +  D    M   G+ PN   Y++
Sbjct: 953  VDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSS 1012

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L+ GLCK   +  A  +F  +       D   Y+ ++ G  +H   K   +L   M    
Sbjct: 1013 LLHGLCKTGQVALALKIFKNLQDHGFEHDQINYSIILHGCCQHLDLKAISDLWFDMIHHN 1072

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +  D+  YTSL++ L R  +LQ+A  +F  M+  G+ P+ + C  L+    ++G + EA 
Sbjct: 1073 IAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSFSKQGLVGEAF 1132

Query: 241  ELQNEM 246
               + M
Sbjct: 1133 LFLDRM 1138



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 1/193 (0%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M   NI  D+  Y ++I+ LC     +D+  +   M ENGL+ N V CT L+D++ K G 
Sbjct: 1068 MIHHNIAPDVYNYTSLIYALCRHRNLQDALGVFELMLENGLSPNIVTCTILVDSFSKQGL 1127

Query: 61   PSEALSLLDEMLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA   LD M  S  I   +  + V+I+GLCK+       + F  M   G  P+V +Y+
Sbjct: 1128 VGEAFLFLDRMHQSLGIVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKRGYVPDVVLYS 1187

Query: 120  ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             +I+G  K   ++ A  L+ +M    + P+   Y++LI+G    +   EA+ L   M   
Sbjct: 1188 IIIEGFVKALKLQEALRLYHKMLDEGVKPNIFTYSSLINGLCNDDRLPEAMGLIRDMIGE 1247

Query: 180  GVDLDLNAYTSLV 192
             + LD   YTS++
Sbjct: 1248 DLLLDNVLYTSII 1260



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 4/224 (1%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            ++ KNI  D  L   ++  L   ++   ++ L  +MK  G + N    + LM  Y   GE
Sbjct: 821  IQAKNIGVDRRLCNFLLKCLVEGNQIMYARSLFDDMKSCGPSPNVCSYSILMSMY-THGE 879

Query: 61   PS---EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
             S   EA  LL EM  + +     T+   + GLC+S  V  A D+   +   G   +   
Sbjct: 880  RSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCRSRQVTSAWDFLQTLSQSGGPCSNYC 939

Query: 118  YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
            + A+I G C +  +++A  +F  M K   +PD  +Y+ L+DG  K     +  ++   M 
Sbjct: 940  FNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHSYSILVDGLCKQGDLLKGYDMLEEMA 999

Query: 178  EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
              G+  +  +Y+SL+ GL + G +  A  +F  +   G   D+I
Sbjct: 1000 RNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQDHGFEHDQI 1043



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 4/244 (1%)

Query: 10   LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
            L +Y  +I      S FED+  LL+ ++   +  +  +C  L+    +  +   A SL D
Sbjct: 797  LQVYAAVIRIFVESSMFEDA--LLTYIQAKNIGVDRRLCNFLLKCLVEGNQIMYARSLFD 854

Query: 70   EMLDSRIEVTVVTFCVLIDGLC--KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            +M        V ++ +L+      +   + EA +    M   G+ PN   Y   + GLC+
Sbjct: 855  DMKSCGPSPNVCSYSILMSMYTHGERSCLEEAFELLCEMESNGVRPNATTYGTYLYGLCR 914

Query: 128  KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
               +  A +    + +         + A+I G+       +A+ + + M + G   D+++
Sbjct: 915  SRQVTSAWDFLQTLSQSGGPCSNYCFNAVIHGFCCEGQVDKAIEVFHGMKKCGYVPDVHS 974

Query: 188  YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            Y+ LV GL + G L +   +  EM   GI P+++   SLL    + G +  A+++   + 
Sbjct: 975  YSILVDGLCKQGDLLKGYDMLEEMARNGICPNQVSYSSLLHGLCKTGQVALALKIFKNLQ 1034

Query: 248  GRGL 251
              G 
Sbjct: 1035 DHGF 1038



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 4/140 (2%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            I  +L +Y  +I GLC  +K+     + ++M + G   + V+ + +++ + KA +  EAL
Sbjct: 1144 IVPNLCMYRVMINGLCKTNKYSGVWNVFADMIKRGYVPDVVLYSIIIEGFVKALKLQEAL 1203

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             L  +MLD  ++  + T+  LI+GLC    + EA+     M    L  +  +YT++I   
Sbjct: 1204 RLYHKMLDEGVKPNIFTYSSLINGLCNDDRLPEAMGLIRDMIGEDLLLDNVLYTSIIACY 1263

Query: 126  CKKNCIERARNLFDEMPKRD 145
            C++  ++ A     EM +RD
Sbjct: 1264 CRRLNMKAAM----EMAQRD 1279


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 121/247 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   Y ++I G C     +++  +   M + G   N V  T L+    +AG  +EAL
Sbjct: 225 LHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEAL 284

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  +M +     TV T+ VLI  L  SG   EA++ F  M + G  PNV  YT LIDGL
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+N ++ AR +  EM ++ +IP    Y ALIDGY K     +A  + + M       + 
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNT 404

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ GL +   + +A  L ++M+ R + P  I   SL+    +  +++ A  L + 
Sbjct: 405 RTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSL 464

Query: 246 MMGRGLL 252
           M   GL+
Sbjct: 465 MNENGLV 471



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 115/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC   +  ++  L ++M E+         T L+ A   +G   EAL+L +EM 
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   E  V T+ VLIDGLCK   + EA      M + GL P+V  Y ALIDG CK+  I+
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + D M      P+T  Y  LI G  K     +A+ L N+M E  +   L  Y SL+
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   L+ A  L   M   G++PD+      +    + G ++EA  L + +  +G+
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGV 505



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K  + ++  Y  +I GLC E+K ++++ +LSEM E GL  + V    L+D Y K G 
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +LD M  +       T+  LI GLCK   V +A+    +M +  L P++  Y +
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK N +E A  L   M +  ++PD   Y+  ID   K    +EA  L + +   G
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   YT+L+ G  + G +  A  L   M+    LP+      L++   +   M EA 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 241 ELQNEMMGRGL 251
            L  +M+  G+
Sbjct: 565 SLVAKMLTMGV 575



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 118/243 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I+ L    +  ++  L +EMKE G   N    T L+D   K  +  EA  +L EM 
Sbjct: 302 YTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS 361

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +  +VVT+  LIDG CK G++ +A +    M      PN   Y  LI GLCKK  + 
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVH 421

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L ++M +R + P    Y +LI G  K    + A  L + M E G+  D   Y+  +
Sbjct: 422 KAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFI 481

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L + G ++EA  LF  +  +G+  +E++  +L+  + + G +D A  L   M+    L
Sbjct: 482 DTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL 541

Query: 253 SGS 255
             S
Sbjct: 542 PNS 544



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 103/226 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y   I  LC E + E++  L   +K  G+ AN VI T L+D Y K G+   A SLL+ ML
Sbjct: 477 YSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +        T+ VLI+GLCK   ++EA     +M   G+ P V  YT LI  + K    +
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFD 596

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F+ M      PD   YTA +  Y      +E  ++  +M E G+  DL  YT L+
Sbjct: 597 HALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLI 656

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G +R G    A      M+  G  P   +   L+K       M E
Sbjct: 657 DGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 119/240 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC + K   +  LL++M E  L+ + +   +L+    K  +   A  LL  M 
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMN 466

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ +     T+ V ID LCK G V EA   F  +   G+  N  +YTALIDG CK   I+
Sbjct: 467 ENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKID 526

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L + M     +P++  Y  LI+G  K +  KEA +L  +M  +GV   +  YT L+
Sbjct: 527 VAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             + + G    A  +F+ M+  G  PD     + L  ++ +G ++E  ++  +M   G+L
Sbjct: 587 GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGIL 646



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 112/250 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   L  Y ++I G C  +  E +  LLS M ENGL  +    +  +D   K G 
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA +L D +    ++   V +  LIDG CK G +  A     RM +    PN   Y  
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK+  ++ A +L  +M    + P    YT LI   LK  +F  AL + N M  +G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  YT+ +      G L+E   +  +M   GILPD +    L+  +   G    A 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 241 ELQNEMMGRG 250
           +    M+  G
Sbjct: 670 DFLKCMVDTG 679



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 135/316 (42%), Gaps = 64/316 (20%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K +KA+  +Y  +I G C   K + +  LL  M  +    N+     L++   K  +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SL+ +ML   ++ TVVT+ +LI  + K G    A+  F  M   G  P+V  YTA
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY----LKHESFK--------- 167
            +     +  +E   ++  +M +  ++PD   YT LIDGY    L H +F          
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTG 679

Query: 168 ------------EALNLKNRM----TEVGVD----------------------------- 182
                       + L+ +NRM    +E+G+D                             
Sbjct: 680 CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKM 739

Query: 183 ------LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
                 +D++ Y +L+ G  +   L+EA+ L H M  RG+ P E +  SLL    + G  
Sbjct: 740 VEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVY 799

Query: 237 DEAIELQNEMMGRGLL 252
            EA+ L + M+  GLL
Sbjct: 800 AEAVRLVDAMVENGLL 815



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 6   IKADLPLYGTIIWGLCIESKF---EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K  L  Y TI+  L   SKF   ++ K +  E+  N ++ N      +++ Y K G   
Sbjct: 155 FKPTLRCYNTILMSL---SKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA     +++ + +     T+  LI G C++  V  A + F  MP  G   N   YT LI
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GLC+   I  A  LF +M + +  P    YT LI          EALNL N M E G +
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +++ YT L+ GL +   + EAR +  EM  +G++P  +   +L+  + + G +D+A E+
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391

Query: 243 QNEM 246
            + M
Sbjct: 392 LDLM 395



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 96/183 (52%)

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           E+L+++I   + TF  +++G CK G V EA  Y  ++   GLHP+   YT+LI G C+  
Sbjct: 184 ELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNK 243

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++ A  +F  MP++    +  +YT LI G  +     EAL L   MTE      +  YT
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            L++ LS  G   EA  LF+EM  +G  P+      L+    +   MDEA ++ +EM  +
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363

Query: 250 GLL 252
           GL+
Sbjct: 364 GLI 366



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 118/269 (43%), Gaps = 29/269 (10%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y   +     +   E+   ++++M E G+  + V  T L+D Y + G    A  
Sbjct: 611 QPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFD 670

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE---------------------------- 98
            L  M+D+  + ++    +LI  L     ++E                            
Sbjct: 671 FLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYE 730

Query: 99  -AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            A+  F +M + G   +V++Y ALI G C++  +E A+ L   M +R M P    Y +L+
Sbjct: 731 IALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLL 790

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D   K   + EA+ L + M E G+   L +Y  LV GL   G  ++A+ +FH ++  G  
Sbjct: 791 DCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYN 850

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEM 246
            DE+    L+    +R  +DE  EL + M
Sbjct: 851 YDEVAWKVLIDGLLKRDLVDECSELIDIM 879



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 76/137 (55%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +YG +I G C + + E+++ L+  MKE G++ +  I  +L+D   K G  +EA+ L+
Sbjct: 747 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 806

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+++ +   + ++ +L+ GL   G   +A   F  +   G + +   +  LIDGL K+
Sbjct: 807 DAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKR 866

Query: 129 NCIERARNLFDEMPKRD 145
           + ++    L D M ++D
Sbjct: 867 DLVDECSELIDIMEEKD 883



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 81/176 (46%)

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
           + + T+  +  ++  L K  L+ E    +  + +  + PN+  + A+++G CK   +  A
Sbjct: 154 KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA 213

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
                ++ +  + PDT  YT+LI G+ +++    A  +   M + G   +  +YT+L+ G
Sbjct: 214 ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L   G + EA  LF +M      P       L+      G   EA+ L NEM  +G
Sbjct: 274 LCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKG 329



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 3/172 (1%)

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
           +I ++++  C  I+ +     V E         +F   P +  Y  ++  L K   I+  
Sbjct: 122 KIRISMIKSCCSIEDVL---FVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEM 178

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
           + ++ E+    + P+   + A+++GY K  +  EA    +++ + G+  D   YTSL+ G
Sbjct: 179 KTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILG 238

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             R   +  A  +F  M  +G   +E+   +L+    E G ++EA++L  +M
Sbjct: 239 HCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G   K ++ +Y TII GLC   + +++  LL+ M+++G+  + V   +L+     +G 
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  ++  M    I   V TF  LID   K G V EA +++  M    L P++  Y+ 
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC  + ++ A  +F  M  +   PD   Y+ LI+GY K +  +  + L   M++ G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   YT L+ G  R G L  A  +F  M+  G+ P+ I    LL    + G +++A+
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416

Query: 241 ELQNEMMGRGL 251
            +  +M   G+
Sbjct: 417 VILADMQKNGM 427



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 127/252 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  D+  Y ++I GLC   ++ D+  ++S M +  +  +      L+DA  K G 
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA    +EM+   ++  +VT+ +LI GLC    + EA + FG M   G  P+V  Y+ 
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +E    LF EM +R ++ +T  YT LI GY +      A  +  RM   G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y  L+ GL   G +++A V+  +M   G+  D +    +++   + G + +A 
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451

Query: 241 ELQNEMMGRGLL 252
           ++   +  +GL+
Sbjct: 452 DIYCSLNCQGLM 463



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 113/220 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +++  D+  Y  +I+GLC+ S+ ++++ +   M   G   + V  + L++ Y K+ +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + L  EM    +    VT+ +LI G C++G +  A + F RM   G+HPN+  Y  
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    IE+A  +  +M K  M  D   Y  +I G  K     +A ++   +   G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  D+  YT+++ GL + G  +EA  LF +M   GILP+E
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 113/236 (47%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
            C  S+   +   L +M + G   + V   +L++ + +     +AL + D+M+    +  
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPN 185

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           VV +  +IDGLCKS  V  A+D   RM   G+ P+V  Y +LI GLC       A  +  
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
            M KR++ PD   + ALID  +K     EA      M    +D D+  Y+ L++GL    
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            L EA  +F  M+ +G  PD +    L+  + +   ++  ++L  EM  RG++  +
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 114/226 (50%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K++    L  +M+  G+  N   C  L++ + +  + S ALS L +M+    E ++VTF 
Sbjct: 96  KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFG 155

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            L++G C+   V +A+  F +M   G  PNV +Y  +IDGLCK   ++ A +L + M K 
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   Y +LI G      + +A  + + MT+  +  D+  + +L+    + G + EA
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              + EMI R + PD +    L+        +DEA E+   M+ +G
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 105/227 (46%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +DS  L   M +     +    + L+ A  K  +    + L ++M    I   + T  
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +L++  C+   +  A+ + G+M   G  P++  + +L++G C+ + +  A  +FD+M   
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              P+   Y  +IDG  K +    AL+L NRM + G+  D+  Y SL+ GL   G   +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +   M  R I PD     +L+    + G + EA E   EM+ R L
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 46/281 (16%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A++  + T++ GLC E +   +  L+  M E G   + V   T+++   K G+   AL++
Sbjct: 8   ANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNM 67

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L +M +S+I+  VV +  ++D LCK G   +A + F  M + G+ PNV  Y  +IDG C 
Sbjct: 68  LRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCS 127

Query: 128 -----------KNCIER------------------------ARNLFDEMPKRDMIPDTTA 152
                      ++ IER                        A  L+ EM +R++ P T  
Sbjct: 128 YGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTIT 187

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDL-----------NAYTSLVWGLSRCGHL 201
           Y+++IDG+ KH   ++A ++ + M   G   D+            A   L+ G  + G++
Sbjct: 188 YSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNV 247

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             A+ LF EMI  G+ PD + C +LL    E G +++A+E+
Sbjct: 248 NVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEM 288



 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 121/236 (51%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I G C       ++ L  EM  NG++ + V C TL+    + G+  +AL +      S+
Sbjct: 237 LIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSK 296

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           +++   T  ++I+G+CK   V EA D F  +P  G+  +V  Y  LI    K+    RA 
Sbjct: 297 MDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAE 356

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
           +++ EM  + +IP T  Y +++DG+ K    +EA  + + M   G   D+  +++L+ G 
Sbjct: 357 DIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGY 416

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + G + +   LF EM  RG++ D I   +L+    + G+++ A ++  EM+  G+
Sbjct: 417 CKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGV 472



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 116/215 (53%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E G  AN V  TTLM+   + G   +AL+L+D M++   +   VT+  +++G+CK G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
              A++   +M +  +  NV +Y+A++D LCK     +A+N+F EM ++ + P+   Y  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           +IDGY  +  + +A  L   M E  +D D+  +++L+    + G +  A  L+ EM+ R 
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I P  I   S++    +   +++A  + + M+ +G
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKG 215



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 109/227 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+    T++ GLC   K E +  +    +++ +  +T  C  +++   K  +
Sbjct: 257 MISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNK 316

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L + +  + +E  VVT+ +LI    K G    A D +  M   G+ P+   Y +
Sbjct: 317 VDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNS 376

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG CK+N +E AR + D M      PD   ++ LI GY K     + L L + M + G
Sbjct: 377 MVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRG 436

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +  D   Y +L+ G  + G L  A+ +F EM+  G+ PD I   S+L
Sbjct: 437 LVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSML 483



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 11/263 (4%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDA--------- 54
           +NI      Y ++I G C  S+ ED+K +   M   G + + +   TL+D          
Sbjct: 179 RNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLI 238

Query: 55  --YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH 112
             + + G  + A  L  EM+ + +   +VT   L+ GLC++G + +A++ F       + 
Sbjct: 239 HGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMD 298

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
            + A    +I+G+CK N ++ A +LF+ +P   +  D   Y  LI  ++K  +F  A ++
Sbjct: 299 LDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDI 358

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M   G+      Y S+V G  +   L+EAR +   M+  G  PD +   +L+K + +
Sbjct: 359 YLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCK 418

Query: 233 RGNMDEAIELQNEMMGRGLLSGS 255
            G +D+ +EL +EM  RGL++ +
Sbjct: 419 AGRVDDGLELFSEMCQRGLVADT 441



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 70/140 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I      Y +++ G C +++ E+++ ++  M   G + + V  +TL+  Y KAG   +
Sbjct: 365 KGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDD 424

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            L L  EM    +    +T+  LI G CK G +  A D F  M   G+ P+   + +++ 
Sbjct: 425 GLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLA 484

Query: 124 GLCKKNCIERARNLFDEMPK 143
           GLC K  +++   + +++ K
Sbjct: 485 GLCTKAELQKGLTMLEDLQK 504


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/235 (33%), Positives = 112/235 (47%), Gaps = 1/235 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C E   E +  LL  M  +G+ A+ V   TLMD   KAG   EA  LL+ M 
Sbjct: 155 FNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMK 214

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S     VV +   + GLCKSG V  A     +M D    PNV  Y  ++DGLCK   I+
Sbjct: 215 ASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKID 274

Query: 133 RARNLFDEMPKRDMIP-DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            A  + ++M   D    +   Y+ ++DG  K    +EA ++   M   G   D+  Y+SL
Sbjct: 275 TALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           V GL + G ++EA     EM   G  P+ +   SL+      G + EA  +  EM
Sbjct: 335 VNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 102/210 (48%), Gaps = 6/210 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
           M+  +   ++  Y TI+ GLC   K + +  ++ +M   +G   N V  +T++D   K G
Sbjct: 248 MRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA S+++ M  +     VVT+  L++GLCK+G + EA++    M   G  PN   Y 
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMI-----PDTTAYTALIDGYLKHESFKEALNLKN 174
           +L+ GLC    +  A  + +EM           P  + Y ALI G  K     +AL    
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           RM   G D D  +Y+++V GL+R G   +A
Sbjct: 428 RMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 123/285 (43%), Gaps = 36/285 (12%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G     DL  Y T++ G C   K E+S+ LL E+   GL  + ++ T +M +  K+   
Sbjct: 74  RGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARL 133

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EAL LL+EM+ +    T++TF  LI G C+   +  A      M   G+  +V  Y  L
Sbjct: 134 GEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTL 193

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI------------------------ 157
           +DGLCK   ++ A  L + M      PD  AY++ +                        
Sbjct: 194 MDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDH 253

Query: 158 -----------DGYLKHESFKEALNLKNRMTEV-GVDLDLNAYTSLVWGLSRCGHLQEAR 205
                      DG  K      AL +  +M    G  L++  Y+++V GL + G  QEAR
Sbjct: 254 DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEAR 313

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +   M   G  PD +   SL+    + G ++EA+E   EM   G
Sbjct: 314 SVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 2/248 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG--LTANTVICTTLMDAYFKA 58
           M  + I+ ++  Y  ++ GLC   ++ +++ L+ +M   G   T + V  +TL+  Y KA
Sbjct: 36  MAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKA 95

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G+  E+  LL E++   +    + +  ++  LCKS  + EA++    M   G  P +  +
Sbjct: 96  GKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITF 155

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             LI G C++  +E A +L   M    +  D   Y  L+DG  K    +EA  L  RM  
Sbjct: 156 NTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKA 215

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G   D+ AY+S V+GL + G +  A  +  +M      P+ +   ++L    + G +D 
Sbjct: 216 SGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDT 275

Query: 239 AIELQNEM 246
           A+E+  +M
Sbjct: 276 ALEMMEQM 283



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 103/253 (40%), Gaps = 47/253 (18%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK--- 92
           M   G   N+V    L++ + K G P +   LL+ M    I+  VV++  L++GLCK   
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 93  ----SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                 LVR+ I   GR       P++  Y+ L+ G CK   +E +R L  E+  R + P
Sbjct: 61  WHEAEELVRDMISRGGRST-----PDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRP 115

Query: 149 DTTAYT-----------------------------------ALIDGYLKHESFKEALNLK 173
           D   YT                                    LI G  + ++ + A +L 
Sbjct: 116 DALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLL 175

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
             M   GV  D+  Y +L+ GL + G LQEA  L   M   G  PD +   S +    + 
Sbjct: 176 QTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKS 235

Query: 234 GNMDEAIELQNEM 246
           G +  A ++  +M
Sbjct: 236 GKVLNAHQVLEQM 248



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 73/173 (42%), Gaps = 2/173 (1%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           VTF  L++G  K G   +       M   G+ PNV  Y  L++GLCK      A  L  +
Sbjct: 11  VTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRD 70

Query: 141 MPKRD--MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
           M  R     PD   Y+ L+ GY K    +E+  L   +   G+  D   YT ++  L + 
Sbjct: 71  MISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKS 130

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L EA  L  EMI  G  P  I   +L+       N++ A  L   M   G+
Sbjct: 131 ARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGV 183


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 124/240 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++  + +Y TII GLC     +D+  L  EM+  G+  N V  ++L+      G 
Sbjct: 42  MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 101

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL +M++ +I   V TF  LID   K G + EA   +  M    + P++  Y++
Sbjct: 102 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 161

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C  + ++ A+ +F+ M  +   PD   Y  LI G+ K++  +E + +   M++ G
Sbjct: 162 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 221

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y  L+ GL + G    A+ +F EM+  G+ P+ +   +LL    + G +++A+
Sbjct: 222 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 281



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + DL  YG ++ GLC     + +  LL++M++  L    +I  T++D   K   
Sbjct: 7   MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  EM    I   VVT+  LI  LC  G   +A      M +  ++P+V  ++A
Sbjct: 67  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+  +  A  L+DEM KR + P    Y++LI+G+  H+   EA  +   M    
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +L+ G  +   ++E   +F EM  RG++ + +    L++  ++ G+ D A 
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246

Query: 241 ELQNEMMGRGL 251
           E+  EM+  G+
Sbjct: 247 EIFKEMVSDGV 257



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 114/224 (50%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L+  M   G   + V    +++   K G+   A +LL++M   ++E  V+ +  +IDGLC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K   + +A++ F  M   G+ PNV  Y++LI  LC       A  L  +M +R + PD  
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            ++ALID ++K     EA  L + M +  +D  +  Y+SL+ G      L EA+ +F  M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           + +   PD +   +L+K   +   ++E +E+  EM  RGL+  +
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 226



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 106/209 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+ ++  Y ++I  LC   ++ D+  LLS+M E  +  +    + L+DA+ K G+
Sbjct: 77  METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 136

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEM+   I+ ++VT+  LI+G C    + EA   F  M      P+V  Y  
Sbjct: 137 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 196

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +E    +F EM +R ++ +T  Y  LI G  +      A  +   M   G
Sbjct: 197 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 256

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
           V  ++  Y +L+ GL + G L++A V+F 
Sbjct: 257 VPPNIMTYNTLLDGLCKNGKLEKAMVVFE 285



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I   +  Y ++I G C+  + +++K +   M       + V   TL+  + K   
Sbjct: 147 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 206

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + +  EM    +    VT+ +LI GL ++G    A + F  M   G+ PN+  Y  
Sbjct: 207 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 266

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +E+A  +F+ + +  M P    Y  +I+G  K    ++  +L   ++  G
Sbjct: 267 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 326

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+ AY +++ G  R G  +EA  LF EM   G LP+     +L++     G+ + + 
Sbjct: 327 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 386

Query: 241 ELQNEMMGRGL 251
           EL  EM   G 
Sbjct: 387 ELIKEMRSCGF 397



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 1/240 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   D+  Y T+I G C   + E+   +  EM + GL  NTV    L+   F+AG+
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 241

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +  EM+   +   ++T+  L+DGLCK+G + +A+  F  +    + P +  Y  
Sbjct: 242 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+CK   +E   +LF  +  + + PD  AY  +I G+ +  S +EA  L   M E G
Sbjct: 302 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y +L+    R G  + +  L  EM   G   D    I L+      G +D++ 
Sbjct: 362 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST-IGLVTNMLHDGRLDKSF 420


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 120/247 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
            +P+Y  +I G+C E  FE++  LL EM   G+  N +  TT+++A   AG    +L++L
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVL 304

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M        + TF  LI G    G   EA+D++ RM   G+ PNV  Y AL+ GLC K
Sbjct: 305 AKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSK 364

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A ++F++M      P+   Y+ALIDGY K      A  + N M   G   ++ AY
Sbjct: 365 RSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAY 424

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T +V  L R     +A  L   M      P+ +   + +K     G +D AI++ ++M  
Sbjct: 425 TCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGN 484

Query: 249 RGLLSGS 255
            G    +
Sbjct: 485 SGCFPNT 491



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 114/234 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC +    D+  + ++M+ NG   N    + L+D Y KAG+   A  + + M+
Sbjct: 354 YNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMI 413

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VV +  ++D LC++ +  +A      M      PN   +   I GLC    ++
Sbjct: 414 THGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVD 473

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +FD+M      P+TT Y  L+D  LK   F EA  L   M   G++L+L  Y +++
Sbjct: 474 WAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTII 533

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +G    G L EA  L  +M+ RG  PD I    ++  + ++G ++ AI+L + +
Sbjct: 534 YGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRL 587



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 30/280 (10%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K+ K     Y  +I  L  E + +  + LL +MK  G++ +  +  +++ +Y +AG   
Sbjct: 69  SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSE 128

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL     M D R++ TV  +  ++D L      +     +  M   G+ PNV  Y  L+
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYT---------------------------- 154
             LCK N ++ A  L  EM  +   PD  +YT                            
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPV 248

Query: 155 --ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
             ALI+G  K  +F+EA  L + M   G+D ++ +YT+++  LS  G+++ +  +  +M 
Sbjct: 249 YNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMF 308

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            RG  P+     SL+K  + +G   EA++  + M+  G++
Sbjct: 309 ARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVV 348



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 5/246 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K  + +Y  I+  L  E++F+    + S MK++G+  N      L+ A  K   
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM     +   V++  LI  LCK G V+EA     R       P+V VY A
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----RELAMSFTPSVPVYNA 251

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G+CK+   E A  L DEM  + + P+  +YT +I+      + + +L +  +M   G
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG 311

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L+ +TSL+ G    G   EA   +  MI  G++P+ +   +L+     + ++ +A+
Sbjct: 312 CSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAV 371

Query: 241 ELQNEM 246
            + N+M
Sbjct: 372 SVFNQM 377



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 5/250 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   ++ ++  Y  ++  LC  ++ + +  LL EM   G   + V  TTL+ +  K G+
Sbjct: 172 MKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGK 231

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L      S     V  +  LI+G+CK     EA      M + G+ PNV  YT 
Sbjct: 232 VKEARELAMSFTPS-----VPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTT 286

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ L     +E +  +  +M  R   P+   +T+LI G+       EAL+  +RM   G
Sbjct: 287 IINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREG 346

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++ AY +L+ GL     L +A  +F++M   G  P+     +L+  + + G++D A 
Sbjct: 347 VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGAS 406

Query: 241 ELQNEMMGRG 250
           E+ N M+  G
Sbjct: 407 EVWNWMITHG 416



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 110/251 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y TII  L      E S  +L++M   G + N    T+L+  +F  G 
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL   D M+   +   VV +  L+ GLC    + +A+  F +M   G  PNV  Y+A
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   ++ A  +++ M      P+  AYT ++D   ++  F +A  L   M    
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + + + GL   G +  A  +F +M   G  P+      LL    +     EA 
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511

Query: 241 ELQNEMMGRGL 251
            L  +M  RG+
Sbjct: 512 GLVKDMEHRGI 522



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 1/201 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N   +   + T I GLC   + + +  +  +M  +G   NT     L+D+  K   
Sbjct: 447 MQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRR 506

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+ +M    IE+ +VT+  +I G C +G++ EA++  G+M   G  P+      
Sbjct: 507 FGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNI 566

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  CK+  +  A  L D +      PD  AYT+LI G   H   +EA+    RM   G
Sbjct: 567 VIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEG 626

Query: 181 VDLDLNAYTSLVWGL-SRCGH 200
           +  ++  +  LV  L S  GH
Sbjct: 627 ISPNVATWNVLVRHLFSNMGH 647



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 4/209 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC  S F  +  L+  M+      NTV   T +     +G    A+ + D+M 
Sbjct: 424 YTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMG 483

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S       T+  L+D L K     EA      M   G+  N+  Y  +I G C    + 
Sbjct: 484 NSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLG 543

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  +M  R   PD      +ID Y K      A+ L +R++      D+ AYTSL+
Sbjct: 544 EALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLI 603

Query: 193 WGLSRCGHL--QEARVLFHEMIGRGILPD 219
            G+  C H+  +EA V    M+  GI P+
Sbjct: 604 SGI--CTHIGVEEAIVYLRRMLSEGISPN 630


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 123/235 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC++ K + +  LL  M  +    N V   TL++   K     +   LL  M 
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISME 354

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +    +    + VLI GL K G   EA+  + +M + G  PN+ VY+A+IDGLC++    
Sbjct: 355 ERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPN 414

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ + + M     +P+   Y++L+ G+ K    +EA+ +   M E G   +   Y+ L+
Sbjct: 415 EAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLI 474

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            GL   G ++EA +++ +M+  GI PD +   S++K     G+MD A++L +EM+
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEML 529



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 119/246 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y T++ GLC E + +++ LLL EM+  G + + VI   L+D   K G+
Sbjct: 213 MPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 272

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S    L+D M         VT+  LI GLC  G + +A+    RM      PN   Y  
Sbjct: 273 LSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GL K+        L   M +R    +   Y+ LI G  K    +EA+ L  +M E G
Sbjct: 333 LINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKG 392

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y++++ GL R G   EA+ + + MI  G LP+     SL+K  ++ G  +EAI
Sbjct: 393 CRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAI 452

Query: 241 ELQNEM 246
           ++  EM
Sbjct: 453 QVWREM 458



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 122/253 (48%), Gaps = 4/253 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +  + +  +Y  +I GL  E K E++  L  +M E G   N V+ + ++D   + G+
Sbjct: 353 MEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGK 412

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P+EA  +L+ M+ S     V T+  L+ G  K+GL  EAI  +  M + G   N   Y+ 
Sbjct: 413 PNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSV 472

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM---T 177
           LIDGLC    ++ A  ++ +M    + PDT AY+++I G     S   AL L + M    
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQE 532

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-M 236
           E     D+  Y  L+ GL     +  A  L + M+ RG  PD I C + L    E+ +  
Sbjct: 533 EPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSC 592

Query: 237 DEAIELQNEMMGR 249
           +E      E++ R
Sbjct: 593 EEGRSFLEELVAR 605



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 112/248 (45%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           NI  +   +  +I  LC     + +  +   M E     +     TLMD   K     EA
Sbjct: 182 NISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEA 241

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + LLDEM       + V + VLIDGLCK G +         M   G  PN   Y  LI G
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHG 301

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC K  +++A +L + M     IP+   Y  LI+G +K     +   L   M E G  L+
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLN 361

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
            + Y+ L+ GL + G  +EA  L+ +M  +G  P+ ++  +++      G  +EA E+ N
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILN 421

Query: 245 EMMGRGLL 252
            M+  G L
Sbjct: 422 GMISSGCL 429



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 4/177 (2%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV----VTFCVLIDGLCKSGLVREAIDYFG 104
            ++++     G     L   D +++S + + +    ++F ++I  LCK G V  AI+ F 
Sbjct: 152 NSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFR 211

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            MP+    P+   Y  L+DGLCK+  I+ A  L DEM      P    Y  LIDG  K  
Sbjct: 212 GMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG 271

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
                  L + M   G   +   Y +L+ GL   G L +A  L   M+    +P+++
Sbjct: 272 DLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDV 328



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 24/183 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC   + +++ ++ S+M   G+  +TV  ++++      G    AL L  EML
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEML 529

Query: 73  ---DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK- 128
              + + +  VVT+ +L+DGLC    V  A+D    M D G  P+V      ++ L +K 
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKS 589

Query: 129 NCIERARNLFDEMPKR--------------------DMIPDTTAYTALIDGYLKHESFKE 168
           +  E  R+  +E+  R                     + P T+ +  ++    K +    
Sbjct: 590 DSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPKKINA 649

Query: 169 ALN 171
           A+N
Sbjct: 650 AIN 652


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 36/283 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVIC-TTLMDAYFKAG 59
           M     + DL  Y  +  GLC   K +++  L  EM+   + +  V+   TL+DA FK  
Sbjct: 306 MTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQ 365

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             S+AL+LL+EM D  ++ ++VT  +++ GLC+ G + EA+     M + GL P+V  Y 
Sbjct: 366 RSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYN 425

Query: 120 ALIDGLCKKNCIERARNLFDEM-----------------------------------PKR 144
            LID  CK   + +A  L DEM                                   P+R
Sbjct: 426 TLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQR 485

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
             +PD  +Y  ++  Y K    + AL L + M++  +   +  Y +L+ GL   G L EA
Sbjct: 486 GFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEA 545

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
               +E++ +G++PD+     ++  + + G++++A +  N+M+
Sbjct: 546 IDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588



 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 121/248 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D     T+++ LC E ++E+++ LL    + G   + V   T+M AYFK  +P  AL
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L DEM   ++  ++ T+  LI GLC  G + EAID    +   GL P+   Y  +I   
Sbjct: 512 YLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAY 571

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  +E+A    ++M +    PD      L++G   H   ++A+ L     E G  +D+
Sbjct: 572 CKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDV 631

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+  L + G +  A   F +M  RG+ PD      +L    E G  +EA  + ++
Sbjct: 632 ITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHK 691

Query: 246 MMGRGLLS 253
           +   G LS
Sbjct: 692 LDESGKLS 699



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 120/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K+ L  +  ++ GLC E + E++   L  M E GL  + +   TL+DAY KA  
Sbjct: 377 MRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARN 436

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L+DEM+ S +++   T   L+  LCK     EA +     P  G  P+   Y  
Sbjct: 437 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGT 496

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    K+N  E A  L+DEM KR + P    Y  LI G        EA++  N + + G
Sbjct: 497 VMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKG 556

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  ++    + G L++A    ++M+     PD + C +L+      G +++AI
Sbjct: 557 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAI 616

Query: 241 ELQNEMMGRG 250
           +L      +G
Sbjct: 617 KLFESWAEKG 626



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++   C +    D+   LS M+  GL+ + V   TL+ A+ + G   EA +LL  M 
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  T  T+  L+    + G +++A +    M  FG  P++  Y  L  GLC+   ++
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 332

Query: 133 RARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            A  L DEM    ++ PD   Y  L+D   K++   +ALNL   M + GV   L  +  +
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           V GL R G L+EA      M   G+ PD I   +L+  + +  N+ +A  L +EM+  GL
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGL 452



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 122/287 (42%), Gaps = 36/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G  +  D+  Y T++   C +    +++ LL+ MK+ G+        TL+ AY + G 
Sbjct: 236 MQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYARLGW 295

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGL-HPNVAVYT 119
             +A ++++ M     E  + T+ VL  GLC++G V EA      M    +  P+V  Y 
Sbjct: 296 IKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYN 355

Query: 120 ALID-----------------------------------GLCKKNCIERARNLFDEMPKR 144
            L+D                                   GLC++  +E A      M + 
Sbjct: 356 TLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEE 415

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   Y  LID Y K  +  +A  L + M   G+ +D     +L++ L +    +EA
Sbjct: 416 GLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 475

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L      RG +PDE+   +++  +++    + A+ L +EM  R L
Sbjct: 476 EELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKL 522



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 3/216 (1%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
            L A   + + L  A   +  P  +L +   ++  R+     TF +L+   C  G + +A
Sbjct: 172 SLQAANAVLSAL--ARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADA 229

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +     M  FGL P+V  Y  L+   C+K  +  AR L   M K  + P    Y  L+  
Sbjct: 230 LSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSA 289

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL-P 218
           Y +    K+A N+   MT  G + DL  Y  L  GL + G + EA  L  EM    I+ P
Sbjct: 290 YARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSP 349

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           D +   +L+   ++     +A+ L  EM  +G+ S 
Sbjct: 350 DVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 17/234 (7%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  D   Y  II   C E   E +    ++M EN    + V C TLM+     G+  +
Sbjct: 555 KGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEK 614

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ L +   +   +V V+T+  LI  LCK G V  A+ +F  M   GL P+   Y  ++ 
Sbjct: 615 AIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLS 674

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            L +    E A+N+  ++ +   + +  +Y       L   S +E    K+   EV  D 
Sbjct: 675 ALSEAGRSEEAQNMLHKLDESGKLSERFSYP------LIKSSAEEVKTGKD--PEVKSDC 726

Query: 184 ---------DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
                    D  +Y   V  L   G L+EA+ +  EM+ +G+  D    I+L++
Sbjct: 727 ESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLME 780


>gi|125558386|gb|EAZ03922.1| hypothetical protein OsI_26055 [Oryza sativa Indica Group]
          Length = 658

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 2/254 (0%)

Query: 1   MKGKNIKADLP--LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
           M+ + +  D+P   Y  +I  LC + K  +   +   M + G  AN  I T L+D+  K 
Sbjct: 320 MEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKF 379

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G   EA++L + M DS +++  VT+ V+++ LC+ G + EA+  F    + G+  N   Y
Sbjct: 380 GREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFY 439

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           T+LIDG  K   +++++ LF+EM  +  +PD+  Y  LIDG  K     +A  L  RM +
Sbjct: 440 TSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMED 499

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G D  +  YT L+ GL +    +EA   +  MI +GI P      +L       G    
Sbjct: 500 DGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSR 559

Query: 239 AIELQNEMMGRGLL 252
           A  + +E+   G++
Sbjct: 560 ACRILDELAPMGVI 573



 Score =  106 bits (265), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 3/245 (1%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEPSE 63
            ++ D+  Y  +I G C   +  D+   LSEM+E   LT + V   TLM  ++  G    
Sbjct: 253 QVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPV 312

Query: 64  ALSLLDEMLDSRI--EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            + L  EM +  +  ++    + ++I  LCK G   E +  F RM   G   N A+YTAL
Sbjct: 313 CIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL 372

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ID + K    + A  LF+ M    +  D+  Y  +++   +     EA+       E G+
Sbjct: 373 IDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGI 432

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            ++   YTSL+ G  + G + +++ LF EMI +G +PD      L+    + G MD+A  
Sbjct: 433 AVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACA 492

Query: 242 LQNEM 246
           L   M
Sbjct: 493 LYKRM 497



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 1/212 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  +   Y ++I G       + SK L  EM   G   ++     L+D   K+G   +
Sbjct: 430 KGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDD 489

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A +L   M D   + TV T+ +LIDGL K     EA+ ++  M D G+ P  A +  L  
Sbjct: 490 ACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLAS 549

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC      RA  + DE+    +IP+T A+  +I+   K   FK+A  L + + + G ++
Sbjct: 550 GLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFKQACKLADGIVQKGREI 608

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
                T ++  L + G+   A  L H  IG G
Sbjct: 609 PGRVRTMMINALRKAGNTDLAVKLVHSKIGIG 640



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD-SRIEVTVVTFCVLIDGLCKSGLV 96
           E+ +  + V    L+  Y +AG   +A++ L EM + +++    VT+  L+      G  
Sbjct: 251 EDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTF 310

Query: 97  REAIDYFGRMPDFGLHPNVA--VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
              I  F  M + G+  ++    Y  +I  LCK         +F+ M KR    +   YT
Sbjct: 311 PVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYT 370

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           ALID   K    KEA+ L  RM + G+ LD   Y  +V  L R G L EA   F     +
Sbjct: 371 ALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEK 430

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           GI  + I   SL+    + G +D++ EL  EM+ +G +  S
Sbjct: 431 GIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDS 471



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 8/230 (3%)

Query: 30  KLLLSEMKENGLTA----NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           + L++E++ +G TA          +L+ +    G   E L     M  + +E + + +  
Sbjct: 168 RQLVAELRAHGDTALRHLTPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNC 227

Query: 86  LIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           L+DGL  +GL+  A++ F  M  +  + P+V  Y  LI G C+      A     EM ++
Sbjct: 228 LLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQ 287

Query: 145 -DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV--DLDLNAYTSLVWGLSRCGHL 201
             + PD   Y  L+  +    +F   + L   M E G+  D+  +AY  ++  L + G  
Sbjct: 288 AKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKP 347

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            E   +F  M+ RG   +  +  +L+    + G   EA+ L   M   GL
Sbjct: 348 FEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALFERMKDSGL 397


>gi|326505288|dbj|BAK03031.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326529675|dbj|BAK04784.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 597

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 109/217 (50%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
            M  +G+ A+ V   T++    K G   EA  L  +M+ + IE   VT+  L+DG C++G
Sbjct: 239 RMANDGVEADIVTWNTVIHGMCKEGRMKEASQLHRDMVAAGIEPDTVTYTTLVDGYCRAG 298

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            V EA++    M   G+ P VA Y A+I  LC+   ++    L  EM +R +  D     
Sbjct: 299 DVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGKMKEVNGLLSEMDERKVQADHVTCN 358

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LI+ Y K      A  +K RM E G+ LD   Y +L+ G S+   L EA+    EM+G 
Sbjct: 359 TLINSYSKKGDMPSACKVKTRMMESGLQLDQFTYKALIHGFSKAKQLDEAKEALFEMMGA 418

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  P+  +   L+   Y+R N D  + + +E+M RGL
Sbjct: 419 GFSPNYSVFSWLVDGFYKRNNADAVLLIPDELMKRGL 455



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D      ++  L        ++ +   M   G+  NT +   ++    KAG+
Sbjct: 135 MRAEGLAPDAHACTALLTSLARARMTATARRVFDGMGRAGVAMNTHVYNAMLHVCLKAGD 194

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A +L+  M  + + + + +F   I    + G+  EA+    RM + G+  ++  +  
Sbjct: 195 AARAEALMTRMDATGVPLDLFSFNTAIALYVRKGMQYEAMCVRDRMANDGVEADIVTWNT 254

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G+CK+  ++ A  L  +M    + PDT  YT L+DGY +     EA+NL+  M   G
Sbjct: 255 VIHGMCKEGRMKEASQLHRDMVAAGIEPDTVTYTTLVDGYCRAGDVGEAMNLRAVMEARG 314

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +++  L   G ++E   L  EM  R +  D + C +L+  + ++G+M  A 
Sbjct: 315 MLPGVATYNAIIRKLCEDGKMKEVNGLLSEMDERKVQADHVTCNTLINSYSKKGDMPSAC 374

Query: 241 ELQNEMMGRGL 251
           +++  MM  GL
Sbjct: 375 KVKTRMMESGL 385



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 104/211 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +   +  Y  II  LC + K ++   LLSEM E  + A+ V C TL+++Y K G+
Sbjct: 310 MEARGMLPGVATYNAIIRKLCEDGKMKEVNGLLSEMDERKVQADHVTCNTLINSYSKKGD 369

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +   M++S +++   T+  LI G  K+  + EA +    M   G  PN +V++ 
Sbjct: 370 MPSACKVKTRMMESGLQLDQFTYKALIHGFSKAKQLDEAKEALFEMMGAGFSPNYSVFSW 429

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG  K+N  +    + DE+ KR + PD + Y +LI    K      A  + ++M   G
Sbjct: 430 LVDGFYKRNNADAVLLIPDELMKRGLPPDKSVYRSLIRRLCKKRLVDLAQKVLHQMQGKG 489

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           ++ D   Y SL +     G L  A    ++M
Sbjct: 490 LEADCLVYASLAYAQLTAGKLAAASDTLNDM 520



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++AD+  + T+I G+C E + +++  L  +M   G+  +TV  TTL+D Y +AG+
Sbjct: 240 MANDGVEADIVTWNTVIHGMCKEGRMKEASQLHRDMVAAGIEPDTVTYTTLVDGYCRAGD 299

Query: 61  PSEALSL-----------------------------------LDEMLDSRIEVTVVTFCV 85
             EA++L                                   L EM + +++   VT   
Sbjct: 300 VGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGKMKEVNGLLSEMDERKVQADHVTCNT 359

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+   K G +  A     RM + GL  +   Y ALI G  K   ++ A+    EM    
Sbjct: 360 LINSYSKKGDMPSACKVKTRMMESGLQLDQFTYKALIHGFSKAKQLDEAKEALFEMMGAG 419

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+ + ++ L+DG+ K  +    L + + + + G+  D + Y SL+  L +   +  A+
Sbjct: 420 FSPNYSVFSWLVDGFYKRNNADAVLLIPDELMKRGLPPDKSVYRSLIRRLCKKRLVDLAQ 479

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + H+M G+G+  D ++  SL       G +  A +  N+M  + L
Sbjct: 480 KVLHQMQGKGLEADCLVYASLAYAQLTAGKLAAASDTLNDMAKKQL 525



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 94/204 (46%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+ A  + G   +A+ + D M    +         L+  L ++ +   A   F  M   G
Sbjct: 115 LLLALAQGGRAGDAVRVFDHMRAEGLAPDAHACTALLTSLARARMTATARRVFDGMGRAG 174

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           +  N  VY A++    K     RA  L   M    +  D  ++   I  Y++     EA+
Sbjct: 175 VAMNTHVYNAMLHVCLKAGDAARAEALMTRMDATGVPLDLFSFNTAIALYVRKGMQYEAM 234

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            +++RM   GV+ D+  + +++ G+ + G ++EA  L  +M+  GI PD +   +L+  +
Sbjct: 235 CVRDRMANDGVEADIVTWNTVIHGMCKEGRMKEASQLHRDMVAAGIEPDTVTYTTLVDGY 294

Query: 231 YERGNMDEAIELQNEMMGRGLLSG 254
              G++ EA+ L+  M  RG+L G
Sbjct: 295 CRAGDVGEAMNLRAVMEARGMLPG 318



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 95/231 (41%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  L    +  D+  +   M+  GL  +   CT L+ +  +A   + A  + D M  + 
Sbjct: 115 LLLALAQGGRAGDAVRVFDHMRAEGLAPDAHACTALLTSLARARMTATARRVFDGMGRAG 174

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           + +    +  ++    K+G    A     RM   G+  ++  +   I    +K     A 
Sbjct: 175 VAMNTHVYNAMLHVCLKAGDAARAEALMTRMDATGVPLDLFSFNTAIALYVRKGMQYEAM 234

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            + D M    +  D   +  +I G  K    KEA  L   M   G++ D   YT+LV G 
Sbjct: 235 CVRDRMANDGVEADIVTWNTVIHGMCKEGRMKEASQLHRDMVAAGIEPDTVTYTTLVDGY 294

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            R G + EA  L   M  RG+LP      ++++K  E G M E   L +EM
Sbjct: 295 CRAGDVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGKMKEVNGLLSEM 345



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 60/148 (40%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G     + +++K  L EM   G + N  + + L+D ++K       L + DE++
Sbjct: 392 YKALIHGFSKAKQLDEAKEALFEMMGAGFSPNYSVFSWLVDGFYKRNNADAVLLIPDELM 451

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +      +  LI  LCK  LV  A     +M   GL  +  VY +L         + 
Sbjct: 452 KRGLPPDKSVYRSLIRRLCKKRLVDLAQKVLHQMQGKGLEADCLVYASLAYAQLTAGKLA 511

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGY 160
            A +  ++M K+ +      Y  L   Y
Sbjct: 512 AASDTLNDMAKKQLSVTPQIYNCLCTSY 539


>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 412

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 129/252 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  +   Y +++ G C+ ++  ++K + S M   G+TAN      +++ + K   
Sbjct: 161 MMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSYNIMINGFCKIKM 220

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L +EM   ++   VVT+  LI+GLCKSG +  A+     M D G  P++  Y++
Sbjct: 221 TDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHDRGQPPDIITYSS 280

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LCK + +++A  L   +  + + P+   YT LIDG  K    ++A N+   +   G
Sbjct: 281 LLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 340

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            ++ +N YT ++ G    G   EA  L  +M      P+ +    +++  ++    D+A 
Sbjct: 341 YNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDNDENDKAE 400

Query: 241 ELQNEMMGRGLL 252
            L  EM+ RGLL
Sbjct: 401 NLLREMITRGLL 412



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 119/237 (50%), Gaps = 4/237 (1%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           LPL+    +    E   +++K +L+ M + G+  N V  ++LMD Y    E + A  +  
Sbjct: 139 LPLW----YNANNEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFS 194

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
            M    +   V ++ ++I+G CK  +  EA++ F  M    L P+V  Y +LI+GLCK  
Sbjct: 195 TMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSG 254

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I  A  L DEM  R   PD   Y++L+D   K+    +A+ L   + + G+  ++  YT
Sbjct: 255 KISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYT 314

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            L+ GL + G L++A  +F +++ +G          ++     +G  DEA+ L ++M
Sbjct: 315 ILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 371



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 92/192 (47%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G   EA ++L  M+   I    VT+  L+DG C    V  A   F  M   G+  NV  Y
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSY 208

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             +I+G CK    + A NLF+EM  R +IPD   Y +LI+G  K      AL L + M +
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHD 268

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G   D+  Y+SL+  L +   + +A  L   +  +GI P+      L+    + G +++
Sbjct: 269 RGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGRLED 328

Query: 239 AIELQNEMMGRG 250
           A  +  +++ +G
Sbjct: 329 AHNIFEDLLVKG 340


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 123/240 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  + K +   Y  +I   C +   + +  LL+EMK+  +  +    +TL+DA  K  +
Sbjct: 204 MEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +L  EM+   I   V TF  +IDGLCK G V +A +    M + G+ P+V  Y  
Sbjct: 264 WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG   +  ++RAR +FD M  + + PD  +Y  LI+GY + +   EA+ +   +++ G
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKG 383

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +     L+ GL   G  + A+  F EM+  G +PD     +LL  +++ G ++EA+
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM 443



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 109/216 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+I+ D+  Y  +I G   + K +++  +  E+ + GL  + V C  L+   F+ G 
Sbjct: 344 MINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGR 403

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +  DEML +     + T C L+ G  K+GLV EA+ +F ++       N+ +YTA
Sbjct: 404 TKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTA 463

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   +++A   F+++P   + PD   YTA+I GY +     EA ++  +M + G
Sbjct: 464 VIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
              D   Y  +V G  R   + E +    E+ G+  
Sbjct: 524 CLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSF 559



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 123/249 (49%), Gaps = 1/249 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPS 62
           K I  +   + T+I GL  E+K +D+  L  ++ +EN    N V+  T+M+   K G   
Sbjct: 136 KGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQ 195

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  LL  M     +    T+ ++ID  CK G++  A      M    + P++  Y+ LI
Sbjct: 196 KAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK +  E  R LF EM   ++ P+   + ++IDG  K    ++A  +   M E GVD
Sbjct: 256 DALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD 315

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y  ++ G    G +  AR +F  MI + I PD I    L+  +  +  +DEA+++
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQV 375

Query: 243 QNEMMGRGL 251
             E+  +GL
Sbjct: 376 CREISQKGL 384



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 132/252 (52%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           NI  ++  + ++I GLC E K ED++ ++  M E G+  + +    ++D Y   G+   A
Sbjct: 278 NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             + D M++  IE  ++++ +LI+G  +   + EA+     +   GL P++     L+ G
Sbjct: 338 REIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHG 397

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L +    + A+N FDEM     IPD   +  L+ GY K+   +EA++  +++     D +
Sbjct: 398 LFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTN 457

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  YT+++ GL + G L +A   F ++   G+ PD I   +++  + + G +DEA ++  
Sbjct: 458 IQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR 517

Query: 245 EMMGRGLLSGSK 256
           +M   G L+ ++
Sbjct: 518 KMEDNGCLADNR 529



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 115/239 (48%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +YGT++ GLC +   + +  LL  M++     NT   T ++DA+ K G    A SLL+EM
Sbjct: 180 MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEM 239

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               I   + T+  LID LCK          F  M    ++PNV  + ++IDGLCK+  +
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  +   M ++ + PD   Y  +IDGY        A  + + M    ++ D+ +Y  L
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNIL 359

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + G +R   + EA  +  E+  +G+ P  + C  LL   +E G    A    +EM+  G
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418



 Score = 46.6 bits (109), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/150 (20%), Positives = 65/150 (43%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL  + T++ G       E++     +++      N  I T ++D   K G+  +A +  
Sbjct: 422 DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATF 481

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +++    +   V+T+  +I G C+ GL+ EA D   +M D G   +   Y  ++ G  + 
Sbjct: 482 EKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRS 541

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID 158
           N +   +   +E+  +    +      L+D
Sbjct: 542 NKVSEMKAFLEEIAGKSFSFEAATVELLMD 571


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 137/254 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +++AD+  Y  +I  LC   +   + LLL  M+++ LT +     TL++ +F+ G+
Sbjct: 286 MERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGK 345

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  + + ML   +  +V T+  +IDG C++  + +A+     M   G+ P+   Y+A
Sbjct: 346 INHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSA 405

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK + +  A  L +++  R +  + T  T LIDG+ +     +A  +   M E G
Sbjct: 406 LLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDG 465

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D D+  Y++L+ G+ R   + E + +   M   GILP+++L  +L+  + + G + EA+
Sbjct: 466 IDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEAL 525

Query: 241 ELQNEMMGRGLLSG 254
           +   ++  RGL++ 
Sbjct: 526 KHFVDIYRRGLVAN 539



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 121/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  ++  D   Y T+I G   E K   ++ + + M    L  +    TT++D Y +   
Sbjct: 321 MRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRR 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +ALS+L EM  + +  + +T+  L++G CK  ++  AI     +   G+  N  + T 
Sbjct: 381 IDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTI 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C+   I +A+ +   M +  + PD   Y+ALI+G  +     E   + +RM + G
Sbjct: 441 LIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSG 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+L+    + G+++EA   F ++  RG++ + ++  +LL   Y  G + EA 
Sbjct: 501 ILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAE 560

Query: 241 ELQNEM 246
             +  M
Sbjct: 561 HFRQYM 566



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 115/233 (49%), Gaps = 1/233 (0%)

Query: 19  GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
            LC   +F  ++ +L +MK   ++ N+V   T++  Y K G    AL +L++M    ++ 
Sbjct: 235 SLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQA 293

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
            V T+ ++ID LC+      A     RM    L P+   Y  LI+G  ++  I  AR +F
Sbjct: 294 DVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVF 353

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
           + M +++++P    YT +IDGY ++    +AL++ + M   GV      Y++L+ G  + 
Sbjct: 354 NHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKV 413

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L  A  L  ++  RGI  ++ +   L+    + G + +A ++   M   G+
Sbjct: 414 SMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGI 466



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 121/245 (49%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           AD   Y +++ G          K ++S+M +N +  N+     LM  Y K G+ S++L L
Sbjct: 749 ADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYL 808

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
              M+   I    VT+ +LI GL + GL+  A+ +  +M   G+ P+  V+  LI    +
Sbjct: 809 YKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSE 868

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           K+ +  A  +F+ M    M P +  ++A+I+G ++      +  + + M +VG+  +   
Sbjct: 869 KSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTH 928

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y +LV    R G +  A  L  EM   GI+P E+   S+++     G ++EA+ + + MM
Sbjct: 929 YIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMM 988

Query: 248 GRGLL 252
             G++
Sbjct: 989 RSGMV 993



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 115/232 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ G C  S    +  L+ ++K  G+T N  + T L+D + + GE S+A  +L  M 
Sbjct: 403 YSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMF 462

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I+  V+T+  LI+G+C+   + E  +   RM   G+ PN  +YT LI   CK   ++
Sbjct: 463 EDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVK 522

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F ++ +R ++ +   + AL+  + +     EA + +  M+ + +  D  ++  ++
Sbjct: 523 EALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRII 582

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
                 G++  A  ++ +M+  G  P+     +LL+   + G++ +A +  +
Sbjct: 583 DSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMS 634



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 110/240 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TI+     + +F+ +  +L +M+ + + A+      ++D   +    + A  LL  M 
Sbjct: 263 YNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMR 322

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +     T+  LI+G  + G +  A   F  M    L P+VA YT +IDG C+   I+
Sbjct: 323 KDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRID 382

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A ++  EM    ++P    Y+AL++GY K      A+ L   +   G+ ++    T L+
Sbjct: 383 KALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILI 442

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  + G + +A+ +   M   GI PD I   +L+        M E  E+ + M   G+L
Sbjct: 443 DGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGIL 502



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 112/247 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  +  LY T+I   C     +++     ++   GL AN VI   L+ A+++ G 
Sbjct: 496 MQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGM 555

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA      M    I    V+F  +ID  C  G +  A   +  M  +G  PNV  Y  
Sbjct: 556 ITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQN 615

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC+   + +AR     +       D   + AL+ G  ++ +  EAL+L  +M +  
Sbjct: 616 LLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNN 675

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D++ YT L+ G  R G +  A V+   M+ +G++PD +    LL      G +  A 
Sbjct: 676 CLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAAS 735

Query: 241 ELQNEMM 247
            + +E++
Sbjct: 736 YVFHEII 742



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 116/250 (46%), Gaps = 1/250 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   +  ++ G+C     +++  L  +M +N    +    T L+  + + G+   AL +L
Sbjct: 644 DEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVIL 703

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCK 127
             ML+  +    V +  L++GL   G V+ A   F  +    GL+ +   Y +L++G  K
Sbjct: 704 QMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLK 763

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +   + +  +M + ++ P++ +Y  L+ GY+K   F ++L L   M   G+  D   
Sbjct: 764 SRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVT 823

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  L+ GLS CG +  A     +M+  GI PD ++   L+    E+  M  A+++ N M 
Sbjct: 824 YRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMK 883

Query: 248 GRGLLSGSKN 257
              +   SK 
Sbjct: 884 WLHMSPSSKT 893



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 115/252 (45%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            I  D  ++  +I     +SK  ++  + + MK   ++ ++   + +++   + G    + 
Sbjct: 852  IFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSH 911

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             +L EML   ++     +  L++  C+ G +  A      M   G+ P     +++I GL
Sbjct: 912  KVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGL 971

Query: 126  CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            C+   +E A  +F  M +  M+P    +T L+    K     +AL+LK  M    + +D+
Sbjct: 972  CRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDV 1031

Query: 186  NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +Y  L+ GL +  H+ +A  L+ EM  +G+ P+    I+L    Y  G +    EL  +
Sbjct: 1032 VSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLED 1091

Query: 246  MMGRGLLSGSKN 257
            +  RGL+   K 
Sbjct: 1092 IEERGLIPAYKQ 1103



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            MK  ++      +  +I GL  +   + S  +L EM + GL  N      L++A  + GE
Sbjct: 882  MKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGE 941

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               A  L +EM    I    V    +I GLC+ G + EA+  F  M   G+ P VA +T 
Sbjct: 942  IDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTT 1001

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L+  LCK++ I  A +L   M    +  D  +Y  LI G  K +   +AL+L   M   G
Sbjct: 1002 LMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKG 1061

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
            +  ++  Y +L   +   G +Q    L  ++  RG++P
Sbjct: 1062 LWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 116/255 (45%), Gaps = 1/255 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMK-ENGLTANTVICTTLMDAYFKAG 59
           M  K +  D   Y  ++ GL  E + + +  +  E+  + GL A+ +   +LM+ Y K+ 
Sbjct: 706 MLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSR 765

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             +    ++ +M  + +     ++ +L+ G  K G   +++  +  M   G+ P+   Y 
Sbjct: 766 NVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYR 825

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LI GL +   I+ A    ++M    + PD   +  LI  + +      AL + N M  +
Sbjct: 826 LLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKWL 885

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            +      +++++ GL R G+L  +  + HEM+  G+ P+    I+L+      G +D A
Sbjct: 886 HMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRA 945

Query: 240 IELQNEMMGRGLLSG 254
             L+ EM   G++  
Sbjct: 946 FRLKEEMKAIGIVPA 960



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   NI  D   +  II   C       +  +  +M   G + N      L+    + G 
Sbjct: 566 MSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGH 625

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A   +  +LD    +   TF  L+ G+C+ G + EA+D   +M      P++  YT 
Sbjct: 626 LVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTI 685

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT-EV 179
           L+ G C+K  I  A  +   M ++ ++PDT AYT L++G +     K A  + + +  + 
Sbjct: 686 LLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKE 745

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D  AY SL+ G  +  ++   + +  +M    + P+      L+  + +RG   ++
Sbjct: 746 GLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKS 805

Query: 240 IELQNEMMGRGL 251
           + L   M+ +G+
Sbjct: 806 LYLYKYMVRKGI 817



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 106/230 (46%), Gaps = 1/230 (0%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E K  D+ + +  M + G  A+ V C T+++A  + GE       L E L  +  + V T
Sbjct: 169 ERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTT 228

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
             +L++ LC +G  R+A D   +M    +  N   Y  ++    KK   + A  + ++M 
Sbjct: 229 CNILLNSLCTNGEFRKAEDMLQKMKSCHI-SNSVTYNTILHWYVKKGRFKAALCVLEDME 287

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           +  +  D   Y  +ID   + +    A  L  RM +  +  D   Y +L+ G  R G + 
Sbjct: 288 RDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKIN 347

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            AR +F+ M+ + ++P      +++  +     +D+A+ + +EM   G++
Sbjct: 348 HARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVM 397


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 114/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L S M  +G+  +    + L++   K  +  +A  L DEMLD  +    VTF  LIDG C
Sbjct: 182 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHC 241

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V  A++ + +M    L P++  Y  LI GLCKK  +++A +L DEM  + + PD  
Sbjct: 242 KSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 301

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 302 TYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREM 361

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G+ PD      ++ +  ++G++    +L  EM   G
Sbjct: 362 LSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 400



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 109/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK +D+  L  EM + GL  N V  TTL+D + K+G 
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGR 245

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 305

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M + ++  D  AYTALI G  +   + +A  +   M   G
Sbjct: 306 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAG 365

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   YT ++    + G +     L  EM   G +P  +
Sbjct: 366 LKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 406



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G  A+      LM  + K G+   A S+ + + 
Sbjct: 105 YFKLVWGF------------YEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAIT 152

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  + G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 153 KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMD 212

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM  + ++P+   +T LIDG+ K      A+ +  +M    +  DL  Y +L+
Sbjct: 213 DANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLI 272

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A  L  EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 273 YGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMI 327



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 74/159 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +++  DL  Y T+I+GLC +   + +  L+ EM   GL  + +  TTL+D   K G+
Sbjct: 256 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGD 315

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A      M+   I +  V +  LI GLC+ G   +A      M   GL P+   YT 
Sbjct: 316 LETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTM 375

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +I+  CKK  +     L  EM +   +P    Y  L++G
Sbjct: 376 IINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/209 (22%), Positives = 105/209 (50%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ + K    +    +
Sbjct: 53  SDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGF 112

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK+  I  A+++F+ + K  + P   ++  L++GY++
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 172

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   GV  D+  Y+ L+ GL +   + +A  LF EM+ +G++P+ + 
Sbjct: 173 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 232

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 233 FTTLIDGHCKSGRVDLAMEIYKQMLSQSL 261



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 92/185 (49%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
             +E+L+     ++  F +L+   CK G +R A   F  +  +GL P+V  +  L++G  
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYI 171

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +   ++    L   M    + PD   Y+ LI+G  K     +A  L + M + G+  +  
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 231

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM
Sbjct: 232 TFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 291

Query: 247 MGRGL 251
             +GL
Sbjct: 292 SMKGL 296



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 75/173 (43%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           +  F  LI    +SG +R+AI+ +    +            +++ + K    +     ++
Sbjct: 55  IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYE 114

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           E+ +         +  L+  + K    + A ++ N +T+ G+   + ++ +L+ G  R G
Sbjct: 115 EILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLG 174

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L E   L   M   G+ PD      L+    +   MD+A EL +EM+ +GL+
Sbjct: 175 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV 227


>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 418

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM  + ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EMI +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+ +L  EM + GL  N V  TTL+D + K G 
Sbjct: 197 MQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 117/221 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD  +    VTF  LIDG C
Sbjct: 193 LKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 104/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A VLF EM+ +G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 126/249 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+  + T+I GLC E     ++  L E     L  N +  T L+  +   GE
Sbjct: 335 MFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 394

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM+       VVTF  LI GL  +G V EA+    +M +  + P+V +Y  
Sbjct: 395 LMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 454

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCKK+ +  A+N+ +EM ++++ PD   Y  LIDG+++ E+  +A  +   M   G
Sbjct: 455 LISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 514

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+ +  +++ G  + G + EA +    M   G +PDE    +++  + ++GN++ A+
Sbjct: 515 VRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 574

Query: 241 ELQNEMMGR 249
               +M+ R
Sbjct: 575 RWLCDMIKR 583



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K     L  YG++I  L  +   E    L  EM++ GL+ N  I  +++DA  K   
Sbjct: 265 MEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWS 324

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A+ +L +M  S  +  ++TF  LI GLC  G VR+A  +        L+PN   YT 
Sbjct: 325 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 384

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C +  +  A +L  EM  R   PD   + ALI G +      EAL ++ +MTE  
Sbjct: 385 LIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 444

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+N Y  L+ GL +   L  A+ +  EM+ + + PDE +  +L+       N+ +A 
Sbjct: 445 VFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDAR 504

Query: 241 ELQNEMMGRGL 251
           ++   M  +G+
Sbjct: 505 KIFEFMEHKGV 515



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 115/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C+  +   +  LL EM   G T + V    L+     AG+ SEAL + ++M 
Sbjct: 382 YTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 441

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + ++   V  + VLI GLCK  ++  A +    M +  + P+  VY  LIDG  +   + 
Sbjct: 442 ERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 501

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR +F+ M  + + PD  +  A+I GY +     EA+   + M +VG   D   YT+++
Sbjct: 502 DARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 561

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G ++ G+L  A     +MI R   P+ +   SL+  + + G+ D A  L   M    L
Sbjct: 562 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEAL 620



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 111/228 (48%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           + +++D++ L  EM      A+      L+      G   E L L++    +     VV 
Sbjct: 182 QRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVF 241

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           + VLIDG C+ G +   +   G M   G  P +  Y +LI+ L KK  +E+  +LF EM 
Sbjct: 242 YNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMR 301

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           KR + P+   Y ++ID   K  S  +A+ +  +M   G D D+  + +L+ GL   GH++
Sbjct: 302 KRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 361

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +A     E I R + P+++    L+     RG +  A +L  EMMGRG
Sbjct: 362 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRG 409



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 113/252 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G++  AD      ++ GLC+E + E+   L+      G   + V    L+D Y + G+
Sbjct: 195 MLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGD 254

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L LL EM       T+VT+  LI+ L K G + +    F  M   GL PNV +Y +
Sbjct: 255 MGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNS 314

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK     +A  +  +M      PD   +  LI G       ++A +         
Sbjct: 315 VIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 374

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +  +YT L+ G    G L  A  L  EM+GRG  PD +   +L+      G + EA+
Sbjct: 375 LNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 434

Query: 241 ELQNEMMGRGLL 252
            ++ +M  R + 
Sbjct: 435 IVREKMTERQVF 446



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 4/223 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            Y  +I G C         LLL EM+  G     V   +L++   K G+  +  SL  EM
Sbjct: 241 FYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEM 300

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               +   V  +  +ID LCK     +A+    +M   G  P++  +  LI GLC +  +
Sbjct: 301 RKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 360

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            +A +   E  +R++ P+  +YT LI G+        A +L   M   G   D+  + +L
Sbjct: 361 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGAL 420

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKH 230
           + GL   G + EA ++  +M  R + PD     +L   L KKH
Sbjct: 421 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKH 463



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 4/233 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+    D+  +G +I GL +  K  ++ ++  +M E  +  +  I   L+    K   
Sbjct: 405 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHM 464

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++L+EML+  ++     +  LIDG  +S  + +A   F  M   G+ P++    A
Sbjct: 465 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNA 524

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G C+   +  A      M K   IPD   YT +I GY K  +   AL     M +  
Sbjct: 525 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 584

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKK 229
              ++  Y+SL+ G  + G    A  LF  M    + P+     IL  SL KK
Sbjct: 585 CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKK 637



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 109/243 (44%), Gaps = 17/243 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K ++ D+     +I G C      ++ L +S M++ G   +    TT++  Y K G 
Sbjct: 510 MEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 569

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + AL  L +M+  + +  VVT+  LI+G CK+G    A   F  M    L PNV  YT 
Sbjct: 570 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTI 629

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK----------------HE 164
           LI  L KK+ + RA   F+ M      P+      L++G                   H 
Sbjct: 630 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 689

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
                +  K  + ++G D   +AY ++++ L R   L+EA    + M  +G +P+ I  +
Sbjct: 690 KDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 748

Query: 225 SLL 227
           SLL
Sbjct: 749 SLL 751



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 100/221 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+ +Y  +I GLC +     +K +L EM E  +  +  +  TL+D + ++  
Sbjct: 440 MTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSEN 499

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  + + M    +   +V+   +I G C+ G++ EAI     M   G  P+   YT 
Sbjct: 500 LGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTT 559

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G  K+  +  A     +M KR   P+   Y++LI+GY K      A  L   M    
Sbjct: 560 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 619

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT L+  L +   +  A + F  M+     P+++
Sbjct: 620 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDV 660



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 1/168 (0%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPD-FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            L+     +G++ +A D   R+ + +G  P V     L+  L ++   + AR L+DEM  
Sbjct: 138 ALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLG 197

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
            D   D  +   L+ G       +E L L       G    +  Y  L+ G  R G +  
Sbjct: 198 EDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGR 257

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L  EM  +G LP  +   SL+    ++G++++   L  EM  RGL
Sbjct: 258 GLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGL 305



 Score = 37.4 bits (85), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 5/155 (3%)

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDG 159
           D    M   G  P  A   AL+        + +A ++ + + ++   +P+ T    L+  
Sbjct: 119 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKL 178

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTS--LVWGLSRCGHLQEARVLFHEMIGRGIL 217
            ++   + +A  L + M  +G D   + Y++  LV GL   G ++E   L     G G +
Sbjct: 179 LVEQRRWDDARKLYDEM--LGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCI 236

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           P  +    L+  +  RG+M   + L  EM  +G L
Sbjct: 237 PHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFL 271


>gi|297725689|ref|NP_001175208.1| Os07g0491500 [Oryza sativa Japonica Group]
 gi|255677777|dbj|BAH93936.1| Os07g0491500, partial [Oryza sativa Japonica Group]
          Length = 654

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 2/254 (0%)

Query: 1   MKGKNIKADLP--LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
           M+ + +  D+P   Y  +I  LC + K  +   +   M + G  AN  I T L+D+  K 
Sbjct: 316 MEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKF 375

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G   EA++L + M DS +++  VT+ V+++ LC+ G + EA+  F    + G+  N   Y
Sbjct: 376 GREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFY 435

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           T+LIDG  K   +++++ LF+EM  +  +PD+  Y  LIDG  K     +A  L  RM +
Sbjct: 436 TSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMED 495

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G D  +  YT L+ GL +    +EA   +  MI +GI P      +L       G    
Sbjct: 496 DGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSR 555

Query: 239 AIELQNEMMGRGLL 252
           A  + +E+   G++
Sbjct: 556 ACRILDELAPMGVI 569



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 3/245 (1%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEPSE 63
            ++ D+  Y  +I G C   +  D+   LSEM+E   LT + V   TLM  ++  G    
Sbjct: 249 QVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPV 308

Query: 64  ALSLLDEMLDSRI--EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            + L  EM +  +  ++    + ++I  LCK G   E +  F RM   G   N A+YTAL
Sbjct: 309 CIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL 368

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ID + K    + A  LF+ M    +  D+  Y  +++   +     EA+       E G+
Sbjct: 369 IDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGI 428

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            ++   YTSL+ G  + G + +++ LF EMI +G +PD      L+    + G MD+A  
Sbjct: 429 AVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACA 488

Query: 242 LQNEM 246
           L   M
Sbjct: 489 LYKRM 493



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 1/212 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  +   Y ++I G       + SK L  EM   G   ++     L+D   K+G   +
Sbjct: 426 KGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDD 485

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A +L   M D   + TV T+ +LIDGL K     EA+ ++  M D G+ P  A +  L  
Sbjct: 486 ACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLAS 545

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC      RA  + DE+    +IP+T A+  +I+   K   FK+A  L + + + G ++
Sbjct: 546 GLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFKQACKLADGIVQKGREI 604

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
                T ++  L + G+   A  L H  IG G
Sbjct: 605 PGRVRTMMINALRKAGNTDLAVKLVHSKIGIG 636



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD-SRIEVTVVTFCVLIDGLCKSGLV 96
           E+ +  + V    L+  Y +AG   +A++ L EM + +++    VT+  L+      G  
Sbjct: 247 EDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTF 306

Query: 97  REAIDYFGRMPDFGLHPNVA--VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
              I  F  M + G+  ++    Y  +I  LCK         +F+ M KR    +   YT
Sbjct: 307 PVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYT 366

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           ALID   K    KEA+ L  RM + G+ LD   Y  +V  L R G L EA   F     +
Sbjct: 367 ALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEK 426

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           GI  + I   SL+    + G +D++ EL  EM+ +G +  S
Sbjct: 427 GIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDS 467



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 8/230 (3%)

Query: 30  KLLLSEMKENGLTA----NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           + L++E++ +G TA          +L+ +    G   E L     M  + +E + + +  
Sbjct: 164 RQLVAELRAHGDTALRHLTPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNC 223

Query: 86  LIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           L+DGL  +GL+  A++ F  M  +  + P+V  Y  LI G C+      A     EM ++
Sbjct: 224 LLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQ 283

Query: 145 -DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV--DLDLNAYTSLVWGLSRCGHL 201
             + PD   Y  L+  +    +F   + L   M E G+  D+  +AY  ++  L + G  
Sbjct: 284 AKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKP 343

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            E   +F  M+ RG   +  +  +L+    + G   EA+ L   M   GL
Sbjct: 344 FEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALFERMKDSGL 393


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 130/254 (51%), Gaps = 7/254 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  D+  Y +++ GLC   + +++++L+ +    G + N +  +TL+    +   
Sbjct: 106 MVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELR 162

Query: 61  P-SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             SEAL L   +L    E  V T+ +LIDGL K   V EA + F  +   GL P+   YT
Sbjct: 163 GVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYT 222

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             IDGLCK   +E A  +  +M ++  +PD  ++ A+I+G  K +   EA  L + M   
Sbjct: 223 VFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 282

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI---LCISLLKKHYERGNM 236
           G   +  ++ +L+ G  R G  ++A   F EM+ RG+ P  +   + +  L K  + G +
Sbjct: 283 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 342

Query: 237 DEAIELQNEMMGRG 250
            EAI L + M+ +G
Sbjct: 343 KEAITLFDAMIEKG 356



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 106/195 (54%), Gaps = 3/195 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  +  +I GLC E + +++++LLS M+  G + N +   TL+    +AG+
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 303

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS---GLVREAIDYFGRMPDFGLHPNVAV 117
             +A++   EML   ++ TVVT+ +L+DGLCK+   G ++EAI  F  M + G  P+V  
Sbjct: 304 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 363

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y+ALIDGL K   ++ AR L   M  +  IP+   Y +LI G    E   EAL L   M 
Sbjct: 364 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMV 423

Query: 178 EVGVDLDLNAYTSLV 192
           E G   D   Y +++
Sbjct: 424 EKGCVPDTITYGTII 438



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 121/250 (48%), Gaps = 3/250 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +  + ++P Y  +I GL  E +  ++  L S + ++GL  + +  T  +D   KAG   +
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL +L +M +      VV+   +I+GLCK   V EA      M   G  PN   +  LI 
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES---FKEALNLKNRMTEVG 180
           G C+    ++A   F EM KR + P    Y  L+DG  K       KEA+ L + M E G
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y++L+ GL + G L +AR L   M  +G +P+     SL+        +DEA+
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEAL 416

Query: 241 ELQNEMMGRG 250
           EL   M+ +G
Sbjct: 417 ELFVAMVEKG 426



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 124/245 (50%), Gaps = 8/245 (3%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T++ G C   + +++  +     + G   + V    L++ + KA +  EA  +L
Sbjct: 44  DVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRIL 103

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--PDFGLHPNVAVYTALIDGLC 126
             M+   +   VVT+  L++GLCK+G V EA     RM   D G  PNV  Y+ LI GLC
Sbjct: 104 QRMVSENLVPDVVTYNSLVNGLCKNGRVDEA-----RMLIVDKGFSPNVITYSTLISGLC 158

Query: 127 KK-NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           ++   +  A  LF  + K+   P+   Y  LIDG LK +   EA  L + + + G++ D 
Sbjct: 159 RELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDA 218

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT  + GL + G +++A ++  +M  +G +PD +   +++    +   +DEA  L + 
Sbjct: 219 ITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSG 278

Query: 246 MMGRG 250
           M  +G
Sbjct: 279 MEAKG 283



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 105/219 (47%), Gaps = 3/219 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D   Y   I GLC   + ED+ L+L +M E G   + V    +++   K     EA 
Sbjct: 214 LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE 273

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL  M         ++F  LI G C++G  ++A+  F  M   G+ P V  Y  L+DGL
Sbjct: 274 VLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 333

Query: 126 CK---KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           CK   +  I+ A  LFD M ++  +PD   Y+ALIDG  K     +A  L   M   G  
Sbjct: 334 CKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCI 393

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
            ++  Y SL+ GL     + EA  LF  M+ +G +PD I
Sbjct: 394 PNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTI 432



 Score =  110 bits (274), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 4/244 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I G C   K ++++ +L  M    L  + V   +L++   K G   EA  L+
Sbjct: 79  DVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLI 138

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKS-GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
              +D      V+T+  LI GLC+    V EA+  FG +   G  P V  Y  LIDGL K
Sbjct: 139 ---VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLK 195

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           ++ +  A  LF  + K  + PD   YT  IDG  K    ++AL +   M E G   D+ +
Sbjct: 196 EDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 255

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + +++ GL +   + EA VL   M  +G  P+ I   +L+      G   +A+    EM+
Sbjct: 256 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 315

Query: 248 GRGL 251
            RG+
Sbjct: 316 KRGV 319



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 6/254 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESK--FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K    ++  Y T+I GLC E +   E  KL  S +K+ G          L+D   K    
Sbjct: 141 KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ-GYEPEVPTYNILIDGLLKEDRV 199

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +EA  L   ++   +E   +T+ V IDGLCK+G V +A+     M + G  P+V  + A+
Sbjct: 200 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 259

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+GLCK+  ++ A  L   M  +   P+  ++  LI G  +   +K+A+     M + GV
Sbjct: 260 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 319

Query: 182 DLDLNAYTSLVWGLSRC---GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
              +  Y  LV GL +    G ++EA  LF  MI +G +PD +   +L+    + G +D+
Sbjct: 320 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 379

Query: 239 AIELQNEMMGRGLL 252
           A  L   M  +G +
Sbjct: 380 ARRLLGAMEAKGCI 393



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 12/221 (5%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M+++G   N +    L+      G  S+A +L + M+ +     VVT+  L+ G CK G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + EA+  F      G  P+V  Y ALI+G CK + ++ A+ +   M   +++PD   Y +
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSR-CGHLQEARVLFHEMIGR 214
           L++G  K+    EA  L   + + G   ++  Y++L+ GL R    + EA  LF  ++ +
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 215 GILPD----EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  P+     IL   LLK+      ++EA EL + ++  GL
Sbjct: 178 GYEPEVPTYNILIDGLLKED----RVNEAFELFSGLVKHGL 214



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%)

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M K    P+   Y AL+ G        +A  L  RM + G   D+  Y +L+ G  + G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           L EA  +F   + RG +PD +   +L+    +   +DEA  +   M+   L+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLV 112


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 124/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I  L    +  +S  LL EM   G+  + V+ T LMD   K G+  EA  +L    
Sbjct: 330 YCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQ 389

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I    VT+ VL+D  C++G +  A     +M +  + PNV  ++++I+GL K+ C+ 
Sbjct: 390 SDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLG 449

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A +   +M    + P+   Y  LIDG+ K +  + AL++   M   GV+ +     SLV
Sbjct: 450 KAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLV 509

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G+++ A  LF +M  RG+L D +   +L+   ++ GNM  A ++  E+M + L
Sbjct: 510 NGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNL 568



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 122/281 (43%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL +Y  ++  L  E K E++K +L   + + +T N V  T L+DA+ +AG 
Sbjct: 353 MVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGN 412

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +L +M +  +   VVTF  +I+GL K G + +A DY  +M D G+ PNV  Y  
Sbjct: 413 IDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGT 472

Query: 121 LID-----------------------------------GLCKKNCIERARNLFDEMPKRD 145
           LID                                   GL K   IE A  LF +M +R 
Sbjct: 473 LIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERG 532

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++ D   YT L+DG  K  +   A  +   + E  +  D   Y   +  L   G   EA+
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
               EM   G+ PD+    +++      G   +A++L  EM
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEM 633



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 132/324 (40%), Gaps = 70/324 (21%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KN+  D  +Y   I  LC   KF ++K  L EM+  GL  +     T++ A  + G+ S+
Sbjct: 566 KNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSK 625

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM----------------- 106
           AL LL EM  + I+  ++T+  L+ GL ++G+V++A      M                 
Sbjct: 626 ALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQ 685

Query: 107 -------PDF-----------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                  PD            GLH ++ VY  L+  LC       A  + DEM  R + P
Sbjct: 686 ACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAP 745

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV-- 206
           DT  + ALI G+ K      A  +  +M   G+  ++  + +L+ GL   G + EA    
Sbjct: 746 DTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVL 805

Query: 207 ---------------------------------LFHEMIGRGILPDEILCISLLKKHYER 233
                                            L+ EM+ +G +P      SL+    + 
Sbjct: 806 SDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKA 865

Query: 234 GNMDEAIELQNEMMGRGLLSGSKN 257
           G M++A EL +EM  RG+L  S  
Sbjct: 866 GMMNQAKELFSEMKRRGVLHTSST 889



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 117/248 (47%), Gaps = 3/248 (1%)

Query: 1   MKGKNIKA-DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           ++G+ I   D+  +  +I G C       +  ++  M   G+  + V   +L+  +F +G
Sbjct: 177 VRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSG 236

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +   AL +++ M    +E  VVT+  LI   CK   + EA   +  M   G+ P+V   +
Sbjct: 237 DADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLS 296

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           AL+DGLC+      A  LF EM K  + P+   Y  LID   K     E+L L   M   
Sbjct: 297 ALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSR 356

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD-- 237
           GV +DL  YT+L+  L + G ++EA+ +        I P+ +    L+  H   GN+D  
Sbjct: 357 GVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGA 416

Query: 238 EAIELQNE 245
           E + LQ E
Sbjct: 417 EQVLLQME 424



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y +++ G       + +  ++  MK +G+  N V  T L+  Y K   
Sbjct: 213 MTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKG 272

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SL + M+ S +   VVT   L+DGLC+ G   EA   F  M   G+ PN   Y  
Sbjct: 273 MDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCT 332

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID L K      +  L  EM  R ++ D   YTAL+D   K    +EA ++        
Sbjct: 333 LIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDN 392

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT LV    R G++  A  +  +M  + ++P+ +   S++    +RG + +A 
Sbjct: 393 ITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAA 452

Query: 241 ELQNEMMGRGL 251
           +   +M   G+
Sbjct: 453 DYMRKMKDSGI 463



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   ++ ++  Y  +I   C     +++  L   M  +G+  + V  + L+D   + G+
Sbjct: 248 MKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQ 307

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA +L  EM    +    VT+C LID L K+    E++   G M   G+  ++ +YTA
Sbjct: 308 FSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTA 367

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D L K+  IE A+++       ++ P+   YT L+D + +  +   A  +  +M E  
Sbjct: 368 LMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKS 427

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  ++S++ GL + G L +A     +M   GI P+ +   +L+   ++    + A+
Sbjct: 428 VIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAAL 487

Query: 241 ELQNEMMGRGL 251
           ++  +M+  G+
Sbjct: 488 DVYRDMLHEGV 498



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 1/236 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  + AD+ +Y T++  LC      ++ ++L EM   G+  +T+    L+  + K+  
Sbjct: 703 MMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSH 762

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++  +ML   +   + TF  L+ GL  +G + EA      M   GL PN   Y  
Sbjct: 763 LDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDI 822

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G  KK+    A  L+ EM  +  IP  + Y +L+  + K     +A  L + M   G
Sbjct: 823 LVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRG 882

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
           V    + Y  L+ G S+  +  E R+L  +M   G  P +   IS + + + R  M
Sbjct: 883 VLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKG-TISSMSRAFSRPGM 937



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 110/251 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  ++  YGT+I G       E +  +  +M   G+ AN  +  +L++   K G 
Sbjct: 458 MKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGN 517

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L  +M +  + +  V +  L+DGL K+G +  A      + +  L P+  VY  
Sbjct: 518 IEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNV 577

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+ LC       A++   EM    + PD   Y  +I    +     +AL L   M    
Sbjct: 578 FINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNS 637

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +L  YT+LV GL   G +++A+ L +EM   G  P  +    +L+        D  +
Sbjct: 638 IKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVIL 697

Query: 241 ELQNEMMGRGL 251
           E+   MMG GL
Sbjct: 698 EIHELMMGAGL 708



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 115/255 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K++  ++  + +II GL        +   + +MK++G+  N V   TL+D +FK   
Sbjct: 423 MEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQG 482

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +ML   +E        L++GL K+G +  A   F  M + GL  +   YT 
Sbjct: 483 QEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTT 542

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGL K   +  A  +  E+ ++++ PD   Y   I+       F EA +    M   G
Sbjct: 543 LMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTG 602

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y +++    R G   +A  L  EM    I P+ I   +L+    E G + +A 
Sbjct: 603 LEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAK 662

Query: 241 ELQNEMMGRGLLSGS 255
            L NEM   G    S
Sbjct: 663 FLLNEMASAGFAPTS 677



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 8/211 (3%)

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           + A+TV     + A  + G    A  +L EM    +    VT    + GLC++GLV EA 
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 101 DYF-----GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
                   GR  D GL  +V  + ALIDG CK   +  A  + + M  + +  D   Y +
Sbjct: 171 ALAEMLVRGRGID-GL--DVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNS 227

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L+ G+        AL +  RM   GV+ ++  YT+L+    +   + EA  L+  M+  G
Sbjct: 228 LVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSG 287

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +LPD +   +L+      G   EA  L  EM
Sbjct: 288 VLPDVVTLSALVDGLCRDGQFSEAYALFREM 318



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 2/180 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  + T++ GL    +  ++  +LS+MK+ GL  N +    L+  Y K   
Sbjct: 773 MLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSN 832

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L  EM+         T+  L+    K+G++ +A + F  M   G+    + Y  
Sbjct: 833 KVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDI 892

Query: 121 LIDGLCK-KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L++G  K +N IE  R L  +M +    P     +++   + +     EA  L   + +V
Sbjct: 893 LLNGWSKLRNGIE-VRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFKV 951


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 1/252 (0%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  + +  D   Y  ++ G   + K +++   L+ M + G   +   CT ++ A  + G 
Sbjct: 809  MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 868

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + A+    +M+D   +  ++ F  LIDGLCK G +++A +    M   G  PNV  +TA
Sbjct: 869  VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 928

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LIDGLCK+   E+A  LF ++ + D   P+   YT++I GY K +    A  L +RM E 
Sbjct: 929  LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 988

Query: 180  GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            G+  ++N YT+L+ G  + G    A  L + M   G +P+     + +    ++    EA
Sbjct: 989  GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 1048

Query: 240  IELQNEMMGRGL 251
             EL N+    GL
Sbjct: 1049 YELLNKAFSCGL 1060



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 114/251 (45%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            ++    K ++  Y ++I G C E K   +++L S MKE GL  N    TTL++ + KAG 
Sbjct: 950  VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 1009

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               A  L++ M D      + T+   ID LCK     EA +   +    GL  +   YT 
Sbjct: 1010 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 1069

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LI   CK+N I +A   F  M K     D      LI  + + +  KE+  L   +  +G
Sbjct: 1070 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 1129

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +      YTS++    + G +  A   FH M   G +PD     SL+    ++  +DEA 
Sbjct: 1130 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEAC 1189

Query: 241  ELQNEMMGRGL 251
            +L   M+ RGL
Sbjct: 1190 KLYEAMIDRGL 1200



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 1/222 (0%)

Query: 32   LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
            +  EM   G+  ++     ++   F+ G+  EA   L  M+         T  +++  LC
Sbjct: 805  VFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC 864

Query: 92   KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
            ++GLV  AI YF +M D G  PN+  +T+LIDGLCKK  I++A  + +EM +    P+  
Sbjct: 865  ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 924

Query: 152  AYTALIDGYLKHESFKEALNLKNRMTEVGV-DLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             +TALIDG  K    ++A  L  ++        +++ YTS++ G  +   L  A +LF  
Sbjct: 925  THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 984

Query: 211  MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            M  +G+ P+     +L+  H + G+   A EL N M   G +
Sbjct: 985  MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFM 1026



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 36/286 (12%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
             K +L  + ++I GLC +   + +  +L EM  NG   N    T L+D   K G   +A 
Sbjct: 884  FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 943

Query: 66   SLL-------------------------------DEMLDSRIE-----VTVVTFCVLIDG 89
             L                                 EML SR++       V T+  LI+G
Sbjct: 944  RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 1003

Query: 90   LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
             CK+G    A +    M D G  PN+  Y A ID LCKK+    A  L ++     +  D
Sbjct: 1004 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 1063

Query: 150  TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
               YT LI    K     +AL    RM + G + D+     L+    R   ++E+  LF 
Sbjct: 1064 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 1123

Query: 210  EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             ++  G++P +    S++  + + G++D A++  + M   G +  S
Sbjct: 1124 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 1169



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 75/157 (47%)

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G + EA+     M + GL P+      +++   +   IE A N+FDEM  R ++PD+++Y
Sbjct: 762 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 821

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             ++ G  +    +EA      M + G   D    T ++  L   G +  A   F +MI 
Sbjct: 822 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 881

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  P+ I   SL+    ++G++ +A E+  EM+  G
Sbjct: 882 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 918



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 92/192 (47%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++  + + G  +EA+ ++ +M +  +  + +T   +++   + GL+  A + F  M   G
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+ + Y  ++ G  +   I+ A      M +R  IPD    T ++    ++     A+
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
               +M ++G   +L  +TSL+ GL + G +++A  +  EM+  G  P+     +L+   
Sbjct: 874 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 231 YERGNMDEAIEL 242
            +RG  ++A  L
Sbjct: 934 CKRGWTEKAFRL 945



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 59/144 (40%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M     +AD+ L   +I   C + K ++S+ L   +   GL       T+++  Y K G+
Sbjct: 1090 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 1149

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               AL     M          T+  LI GLCK  +V EA   +  M D GL P       
Sbjct: 1150 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 1209

Query: 121  LIDGLCKKNCIERARNLFDEMPKR 144
            L    CK+N    A  L + + K+
Sbjct: 1210 LAYEYCKRNDSANAMILLEPLDKK 1233


>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
 gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
          Length = 321

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 117/240 (48%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G ++ GLC  ++  D+  L+  M E G   N ++   +MDA  K G  +EA   ++ M 
Sbjct: 13  FGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGYIETMR 72

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  T+VT+ +LIDG CK   +  A++    M   G  PN   Y   + GLCK   ++
Sbjct: 73  SMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVD 132

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF  M ++ +  D   YT LIDG  +     EA +L + M   G       Y +++
Sbjct: 133 DALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAIL 192

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNEMMGRGL 251
             L +   + EA  LF  M G GILPD  L   ++   Y RG+ +D+A+ L  +M   GL
Sbjct: 193 SWLCKGSRINEAHKLFKRMTGSGILPD-WLTFGMMVFGYCRGHRIDDALLLLQQMKSAGL 251



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 113/245 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +   +  Y  +I G C E K   +  +L EM   G   N V   T +    K G+
Sbjct: 71  MRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK 130

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L   M + +I + V  +  LIDGLC++G + EA      M + G  P    Y A
Sbjct: 131 VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNA 190

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LCK + I  A  LF  M    ++PD   +  ++ GY +     +AL L  +M   G
Sbjct: 191 ILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAG 250

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y +L+  L+R G + EA  L  EMI RG+ P+      + K+  +  N+   +
Sbjct: 251 LAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALMRKQQTDDSNLVVEL 310

Query: 241 ELQNE 245
           + + E
Sbjct: 311 DYRKE 315



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 100/217 (46%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E G     V    L+D   KA   ++A  L++ M +       + F  ++D LCK G 
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
             EA  Y   M   G+ P +  Y  LIDG CK+  + RA  +  EM  R   P+   Y  
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
            + G  K+    +AL L   MTE  + LD+  YT+L+ GL + G L EA  L  EM   G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +P      ++L    +   ++EA +L   M G G+L
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGIL 217


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 131/273 (47%), Gaps = 37/273 (13%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENG--LTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           I+ GLC E++ +++  LL  M ++G     N V  +T++D   K G+P +A +   EMLD
Sbjct: 167 ILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLD 226

Query: 74  SRIEVTVV-----------------------------------TFCVLIDGLCKSGLVRE 98
            RI   VV                                   T+  L+ G C SG + E
Sbjct: 227 RRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTE 286

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           AI +  +M   G+ PNV  Y++ +D LCK      AR +FD M KR + PD T Y++L+ 
Sbjct: 287 AIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLH 346

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           GY    +  E   L + M +  +  D   + +L++  ++ G + EA ++F +M  +G+ P
Sbjct: 347 GYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQGLKP 406

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + +   +L+  + +   M+ A+ L  EM+  G+
Sbjct: 407 NCVTYSTLINGYCKITRMENALALFQEMVSNGV 439



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 124/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++ +Y +II  LC     + +  +   M +NG+T N    T+L+  +  +G+
Sbjct: 224 MLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQ 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA+  L++M  + +E  VVT+   +D LCK+G   EA   F  M   GL P++  Y++
Sbjct: 284 LTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSS 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   +  +     LFD M + DM PD   +  LI    K     EA+ + ++M + G
Sbjct: 344 LLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y++L+ G  +   ++ A  LF EM+  G+ P+ I    +L+  +  G    A 
Sbjct: 404 LKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTATAK 463

Query: 241 ELQNEMMGRG 250
           E   +++  G
Sbjct: 464 EFYVQIIKSG 473



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 95/197 (48%), Gaps = 6/197 (3%)

Query: 61  PSEALSLLDEMLD---SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
           P+ A+S  + M     S +  TV T+ +LI   C +G +       G +   G      +
Sbjct: 68  PAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPII 127

Query: 118 YTALIDGLCKKNCIERARNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +  L+ GLC     + A ++    M +   +P+  ++T ++ G       +EAL L + M
Sbjct: 128 FNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMM 187

Query: 177 TEVGVDL--DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            + G     ++ +Y++++ GL + G   +A   + EM+ R ILP+ ++  S++    +  
Sbjct: 188 ADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQ 247

Query: 235 NMDEAIELQNEMMGRGL 251
            MD+A+E+ + M+  G+
Sbjct: 248 AMDKAMEVHDRMVKNGV 264



 Score = 43.9 bits (102), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 90/210 (42%), Gaps = 8/210 (3%)

Query: 50  TLMD-AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           T+ D A   +G   +AL + DE+L   I   + +    +  + +      A+  F RM  
Sbjct: 22  TIQDRARVGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPA-AAVSRFNRMAR 80

Query: 109 FG---LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            G   + P V  Y  LI   C    ++        + K+    +   +  L+ G    + 
Sbjct: 81  AGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKR 140

Query: 166 FKEALNLKNR-MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI--GRGILPDEIL 222
             +A+++  R MTE+    ++ ++T ++ GL      QEA  L H M   G G LP+ + 
Sbjct: 141 TDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVS 200

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +++    + G+ D+A     EM+ R +L
Sbjct: 201 YSTVIDGLLKGGDPDKAYATYREMLDRRIL 230


>gi|34393621|dbj|BAC83297.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 657

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 2/254 (0%)

Query: 1   MKGKNIKADLP--LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
           M+ + +  D+P   Y  +I  LC + K  +   +   M + G  AN  I T L+D+  K 
Sbjct: 319 MEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTALIDSMGKF 378

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G   EA++L + M DS +++  VT+ V+++ LC+ G + EA+  F    + G+  N   Y
Sbjct: 379 GREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGIAVNAIFY 438

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           T+LIDG  K   +++++ LF+EM  +  +PD+  Y  LIDG  K     +A  L  RM +
Sbjct: 439 TSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACALYKRMED 498

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G D  +  YT L+ GL +    +EA   +  MI +GI P      +L       G    
Sbjct: 499 DGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLASGLCLSGKFSR 558

Query: 239 AIELQNEMMGRGLL 252
           A  + +E+   G++
Sbjct: 559 ACRILDELAPMGVI 572



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 115/245 (46%), Gaps = 3/245 (1%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEPSE 63
            ++ D+  Y  +I G C   +  D+   LSEM+E   LT + V   TLM  ++  G    
Sbjct: 252 QVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTFPV 311

Query: 64  ALSLLDEMLDSRI--EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            + L  EM +  +  ++    + ++I  LCK G   E +  F RM   G   N A+YTAL
Sbjct: 312 CIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYTAL 371

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ID + K    + A  LF+ M    +  D+  Y  +++   +     EA+       E G+
Sbjct: 372 IDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEKGI 431

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            ++   YTSL+ G  + G + +++ LF EMI +G +PD      L+    + G MD+A  
Sbjct: 432 AVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDDACA 491

Query: 242 LQNEM 246
           L   M
Sbjct: 492 LYKRM 496



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 1/212 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  +   Y ++I G       + SK L  EM   G   ++     L+D   K+G   +
Sbjct: 429 KGIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDSYCYNVLIDGLAKSGRMDD 488

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A +L   M D   + TV T+ +LIDGL K     EA+ ++  M D G+ P  A +  L  
Sbjct: 489 ACALYKRMEDDGCDQTVYTYTILIDGLFKEHKNEEALKFWDAMIDKGITPTAAAFRTLAS 548

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC      RA  + DE+    +IP+T A+  +I+   K   FK+A  L + + + G ++
Sbjct: 549 GLCLSGKFSRACRILDELAPMGVIPET-AHEDMINVLCKAGRFKQACKLADGIVQKGREI 607

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
                T ++  L + G+   A  L H  IG G
Sbjct: 608 PGRVRTMMINALRKAGNTDLAVKLVHSKIGIG 639



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 3/221 (1%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD-SRIEVTVVTFCVLIDGLCKSGLV 96
           E+ +  + V    L+  Y +AG   +A++ L EM + +++    VT+  L+      G  
Sbjct: 250 EDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQAKLTPDKVTYLTLMQCHYSEGTF 309

Query: 97  REAIDYFGRMPDFGLHPNVA--VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
              I  F  M + G+  ++    Y  +I  LCK         +F+ M KR    +   YT
Sbjct: 310 PVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKPFEGMAVFERMLKRGCAANAAIYT 369

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           ALID   K    KEA+ L  RM + G+ LD   Y  +V  L R G L EA   F     +
Sbjct: 370 ALIDSMGKFGREKEAMALFERMKDSGLKLDSVTYGVIVNCLCRFGKLDEAVACFRSCQEK 429

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           GI  + I   SL+    + G +D++ EL  EM+ +G +  S
Sbjct: 430 GIAVNAIFYTSLIDGFGKAGMVDQSKELFEEMIAKGFVPDS 470



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 101/230 (43%), Gaps = 8/230 (3%)

Query: 30  KLLLSEMKENGLTA----NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           + L++E++ +G TA          +L+ +    G   E L     M  + +E + + +  
Sbjct: 167 RQLVAELRAHGDTALRHLTPSSSASLIRSLAALGLAEELLWAWKAMRLAGVEPSRLIYNC 226

Query: 86  LIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           L+DGL  +GL+  A++ F  M  +  + P+V  Y  LI G C+      A     EM ++
Sbjct: 227 LLDGLVNAGLLDTAVNVFDAMSTEDQVRPDVVSYNILIKGYCRAGRAHDAMARLSEMQEQ 286

Query: 145 -DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV--DLDLNAYTSLVWGLSRCGHL 201
             + PD   Y  L+  +    +F   + L   M E G+  D+  +AY  ++  L + G  
Sbjct: 287 AKLTPDKVTYLTLMQCHYSEGTFPVCIGLFQEMEERGMGNDIPQHAYVLVIGALCKDGKP 346

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            E   +F  M+ RG   +  +  +L+    + G   EA+ L   M   GL
Sbjct: 347 FEGMAVFERMLKRGCAANAAIYTALIDSMGKFGREKEAMALFERMKDSGL 396


>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 132/287 (45%), Gaps = 37/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I  D+  Y ++I+G C E +  ++  + SE+K    T N V  TTL+D Y K  E
Sbjct: 257 MEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIK--NATPNHVTYTTLIDGYCKTNE 314

Query: 61  PSEALS-----------------------------------LLDEMLDSRIEVTVVTFCV 85
             EAL                                    LL+EM + +++   +T   
Sbjct: 315 LEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNT 374

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+  CK G ++ A+ +  +M + GL P+   Y ALI G CK N +E A+ L   M    
Sbjct: 375 LINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAG 434

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P    Y+ ++DGY K ++    L L +     G+ LD++ Y +L+    +   +Q A 
Sbjct: 435 FTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAE 494

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            LF+ M G+GI  + ++  S+   ++  GN+  A  +  EM  R L+
Sbjct: 495 RLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLEEMARRRLM 541



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 118/278 (42%), Gaps = 37/278 (13%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y  +          E ++ LL+EM   G+  +     TL+  Y K G   EALS+ 
Sbjct: 195 NIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQ 254

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M    I + +V++  LI G CK G +REA+  F  + +    PN   YT LIDG CK 
Sbjct: 255 NRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNAT--PNHVTYTTLIDGYCKT 312

Query: 129 NCIER-----------------------------------ARNLFDEMPKRDMIPDTTAY 153
           N +E                                    A  L +EM +R +  D    
Sbjct: 313 NELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITC 372

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             LI+ Y K    K AL  KN+M E G+  D   Y +L+ G  +   L+ A+ L   M+ 
Sbjct: 373 NTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLD 432

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  P       ++  + ++ NMD  + L +E + RG+
Sbjct: 433 AGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGI 470



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 8/256 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +   +  Y +I+  LC + +  D+  LL+EM E  L A+ + C TL++AY K G+
Sbjct: 325 MEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGD 384

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL   ++ML++ ++    T+  LI G CK+  +  A +    M D G  P+   Y+ 
Sbjct: 385 LKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSW 444

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG  KK+ ++    L DE   R +  D + Y ALI    K E  + A  L   M   G
Sbjct: 445 IVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKG 504

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL--CISLLKKHYERGNMDE 238
           +  +   YTS+ +     G++  A  +  EM  R ++    L  C S         N ++
Sbjct: 505 ISGESVIYTSIAYAYWNVGNVSAASSMLEEMARRRLMITVKLYRCFST-----SDANENK 559

Query: 239 AIEL-QNEMMGRGLLS 253
             ++  N +M RGL+S
Sbjct: 560 VSQIFWNHVMDRGLMS 575



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 112/220 (50%), Gaps = 2/220 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +   M + G+  N  I   L  A  K+G+   A  LL+EM    +   + T+  L+   C
Sbjct: 183 IYKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYC 242

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G+  EA+    RM   G++ ++  Y +LI G CK+  +  A  +F E+  ++  P+  
Sbjct: 243 KKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEI--KNATPNHV 300

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDGY K    +EAL +   M   G+   +  Y S++  L + G +++A  L +EM
Sbjct: 301 TYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEM 360

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             R +  D I C +L+  + + G++  A++ +N+M+  GL
Sbjct: 361 SERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGL 400



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 109/212 (51%), Gaps = 2/212 (0%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
            N+ + + L+  Y K+    +A+ + ++M    ++  +    VL++ L K G+       
Sbjct: 124 VNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKI 183

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           + RM   G+ PN+ +Y  L     K   +ERA  L +EM  + ++ D   Y  L+  Y K
Sbjct: 184 YKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCK 243

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                EAL+++NRM   G++LD+ +Y SL++G  + G ++EA  +F E+  +   P+ + 
Sbjct: 244 KGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEI--KNATPNHVT 301

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             +L+  + +   ++EA+++   M  +GL  G
Sbjct: 302 YTTLIDGYCKTNELEEALKMCKLMEAKGLYPG 333


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 123/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II   C     +++     +M+  G+  N V   TL++ + K G   +A  LL+ +L
Sbjct: 432 YNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLL 491

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ ++  + TF  ++DGLC+     EA++ F  M ++G++PN  +Y  LI  LC    + 
Sbjct: 492 ENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVA 551

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           R+  L   M K  + PDT +Y ALI  + +    ++A  L + M+  G++ D   Y++ +
Sbjct: 552 RSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFI 611

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             LS  G L+EA+ +F+ M   G  PD  +C  ++K   ++  ++EA  +      +G+
Sbjct: 612 EALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGI 670



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 5/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K    ++  Y  +I G CI S+ +++  +   MK++G+  N      L+   F+  +
Sbjct: 240 MKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVD 299

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDG----LCKSGLVREAIDYFGR-MPDFGLHPNV 115
           PS+AL LL E LD   E   V F +  D     L  + + +E + +  R +   G  P  
Sbjct: 300 PSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGN 359

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
           +V+  ++  L K   +    ++F+ + K+ +     AY ALI+   K+E  +E   +  +
Sbjct: 360 SVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQ 419

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           +   G+  ++ +Y  ++    R   +  A   F +M  RG++P+ +   +L+  H + G 
Sbjct: 420 LISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGA 479

Query: 236 MDEAIELQNEMMGRGL 251
           +D+A +L   ++  GL
Sbjct: 480 IDKARKLLESLLENGL 495



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 93/209 (44%)

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           L A+  +   L +   + G    ++ LL E+ +    VT    C L+    + GL   + 
Sbjct: 105 LAAHNSVHRALRNTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGRLGLANYSA 164

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
             F ++   GL P   +Y ALID L K N I+ A   F +M   + + D   Y  LI G 
Sbjct: 165 HVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGV 224

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K     EAL L  +M + G   ++  YT L+ G      + EA  +F  M   G+ P+E
Sbjct: 225 CKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNE 284

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGR 249
               +L+   +   +  +A+EL +E + R
Sbjct: 285 ATVRALVHGVFRCVDPSKALELLSEFLDR 313



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 103/216 (47%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           +++ G+ A       L++  +K     E   +  +++   +   V ++ ++I+  C++ L
Sbjct: 385 LRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKL 444

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           +  A + F  M   G+ PN+  +  LI+G CK   I++AR L + + +  + PD   +++
Sbjct: 445 MDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSS 504

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           ++DG  + +  +EAL     M E G++ +   Y  L+  L   G +  +  L   M   G
Sbjct: 505 IVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEG 564

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I PD     +L++       +++A +L + M   GL
Sbjct: 565 ISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGL 600



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  + +I+ GLC   + E++    +EM E G+  N VI   L+ +    G+ + ++
Sbjct: 495 LKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSV 554

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL  M    I     ++  LI   C+   V +A   F  M   GL+P+   Y+A I+ L
Sbjct: 555 KLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEAL 614

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            +   +E A+ +F  M      PD+     +I   ++ E  +EA N+  R  + G+ L+
Sbjct: 615 SESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISLN 673



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 97/212 (45%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G      +   +M    K  E  E   + + +    ++  +  +  LI+ L K+    E 
Sbjct: 354 GYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEG 413

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
              +G++   GL  NV  Y  +I+  C+   ++ A   F +M  R ++P+   +  LI+G
Sbjct: 414 DRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLING 473

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           + K  +  +A  L   + E G+  D+  ++S+V GL +    +EA   F EMI  GI P+
Sbjct: 474 HCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPN 533

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++   L++     G++  +++L   M   G+
Sbjct: 534 AVIYNILIRSLCTIGDVARSVKLLRRMQKEGI 565



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 4/180 (2%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           GL+  T +   L+DA  K+     A     +M          T+  LI G+CK G+V EA
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEA 233

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    +M D G  PNV  YT LI+G C  + ++ A  +F+ M    + P+     AL+ G
Sbjct: 234 LRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHG 293

Query: 160 YLKHESFKEALNLKNRMTEVGVDLD----LNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
             +     +AL L +   +   + +    + A  ++++ L+     +E  V    ++GRG
Sbjct: 294 VFRCVDPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRG 353



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 46/284 (16%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           LY  +I  L   +  + + L   +M  +   A+     TL+    K G   EAL L+ +M
Sbjct: 181 LYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQM 240

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            D      V T+ +LI+G C +  V EA   F  M D G++PN A   AL+ G+ +  C+
Sbjct: 241 KDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFR--CV 298

Query: 132 E--RARNLFDEMPKRDM----------------------------------------IPD 149
           +  +A  L  E   R+                                          P 
Sbjct: 299 DPSKALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPG 358

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
            + +  ++   +K    +E  ++   + + GV   + AY +L+  L +    +E   ++ 
Sbjct: 359 NSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYG 418

Query: 210 EMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNEMMGRGLL 252
           ++I  G++ + +   +++   + R   MD A E   +M  RG++
Sbjct: 419 QLISDGLISN-VFSYNMIINCFCRAKLMDNASEAFRDMQVRGVV 461



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 77/183 (42%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           LL E++  G      +   L+ ++ + G  + +  +  ++    +  T   +  LID L 
Sbjct: 131 LLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALV 190

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KS  +  A   F +M       +   Y  LI G+CK   ++ A  L  +M  +   P+  
Sbjct: 191 KSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVF 250

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LI+G+       EA  +   M + GV  +     +LV G+ RC    +A  L  E 
Sbjct: 251 TYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEF 310

Query: 212 IGR 214
           + R
Sbjct: 311 LDR 313



 Score = 38.9 bits (89), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 66/166 (39%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L + L + G    ++D    + + G      +  AL+    +      + ++F ++    
Sbjct: 115 LRNTLHRKGPALLSVDLLRELRNLGFRVTEDLLCALLASWGRLGLANYSAHVFCQISFLG 174

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P T  Y ALID  +K  S   A     +M       D   Y +L+ G+ + G + EA 
Sbjct: 175 LSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEAL 234

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L  +M  +G  P+      L++       +DEA  +   M   G+
Sbjct: 235 RLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGV 280


>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 418

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 123/238 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ G       ++   L S M  +G+  +    + L++   K  +  EA  L +EML
Sbjct: 174 FNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEML 233

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+ +    VTF  LIDG CK+G V  A++ + ++   G  P++  Y  LI GLCKK  ++
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLK 293

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +AR+L DEM  +++ PD   YT LIDG  K    + A   + RM +  + LD  AYT+L+
Sbjct: 294 QARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALI 353

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL + G   +A  +   M+  G+ PD      ++ +  ++G++    +L  EM   G
Sbjct: 354 SGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDG 411



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 108/218 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK +++  L +EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  ++L       ++T+  LI GLCK G +++A D    M    L P+   YT 
Sbjct: 257 VDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D   YT ++    + G ++    L  EM   G +P
Sbjct: 377 LKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVP 414



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G  A+      LM  + K GE   A S+ D + 
Sbjct: 116 YFKLVWGF------------YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L+ G  + G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM    ++P+   +T LIDG+ K+     A+ +  ++   G   DL  Y +L+
Sbjct: 224 EANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++AR L  EM  + + PD+I   +L+    + G+++ A E +  M+
Sbjct: 284 FGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMI 338



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 104/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK+  +  A+++FD + K  + P   ++  L+ GY++
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIR 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   GV  D+  Y+ L+ GL +   + EA  LF+EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +++ +G 
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQLLSQGF 272


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 121/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC          L  EM E G+  N    T L++ + K  +  EA  L D+M+
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           DS +    VTF V+I+G C  G +R+A   + +M + GL P+   Y +LI GLC  + + 
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A     ++     + +  + TAL+ G+ +   F E  +L + M   GV LDL ++T +V
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +   +    +++ VLF EM  +G+ PD+I    ++    +  NM +A+   ++M+  G
Sbjct: 626 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG 683



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +KA    Y  +++GLC   + +++  + + M   G+TA+ V   TL+  + +  E
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +M+      +      +ID L K  LV EA     ++ D G+ PNV  Y A
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK    + A  LF EM  R + P+   Y  LI    K    ++AL L ++M + G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + + +  Y SL+ G  + G L  AR L   M+  G+ P       L+      G++   +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 241 ELQNEMMGRGL 251
           EL  EM  RG+
Sbjct: 464 ELHREMAERGI 474



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ ++ +   Y  +I  LC     ED+  L  +M++ G+        +L++ Y K G 
Sbjct: 364 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 423

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL  M+   +  T  ++  LI GLC++G +   ++    M + G+  N   +TA
Sbjct: 424 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTA 483

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A  LFD+M   ++IP+   +  +I+GY    + ++A  L ++M E+G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y SL+ GL     + +A     ++     + +     +LL   +  G   E  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 603

Query: 241 ELQNEMMGRGL 251
            L +EM  RG+
Sbjct: 604 HLWDEMAVRGV 614



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 115/225 (51%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E++  L  ++ + G+  N      L+D   K     +A  L  EM    +E   VT+ +L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I  LCK G++ +A+  F +M D G+   V  Y +LI+G CK+  ++RAR L   M K  +
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P   +Y+ LI G  ++      + L   M E G+  +   +T+L+ G  +   + EA  
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           LF +MI   ++P+E+    +++ +   GN+ +A +L ++M+  GL
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 107/215 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC   +F+D+  L  EM   GL  N V    L+ A  K G   +AL L D+M 
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I+VTV  +  LI+G CK G +  A      M   GL P  A Y+ LI GLC+   + 
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 460

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L  EM +R +  +   +TALI+G+ K +   EA  L ++M +  V  +   +  ++
Sbjct: 461 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 520

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            G    G++++A  L+ +M+  G+ PD     SL+
Sbjct: 521 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 114/247 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + AD   Y T+++G C   + E +  +  +M   G   +   C+ ++D   K     EA 
Sbjct: 264 VTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAF 323

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  ++ D  +   V  +  LID LCK+    +A   F  M   GL PN   Y  LI  L
Sbjct: 324 SLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHAL 383

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  IE A  LFD+M  + +      Y +LI+GY K  S   A  L + M + G+    
Sbjct: 384 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            +Y+ L+ GL R G L     L  EM  RGI  +     +L+    +   MDEA  L ++
Sbjct: 444 ASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 503

Query: 246 MMGRGLL 252
           M+   ++
Sbjct: 504 MIDSNVI 510



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 123/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K DL  +  I++    +   E S +L  EMKE G+  + +  T ++DA  K   
Sbjct: 609 MAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEEN 668

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+  D+M+        VT  VLI+ LCKSG +  A      M    + PN   Y  
Sbjct: 669 MIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC 728

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +D    +  +E+A++L   M  +  +    ++  LI G  K    +EA++L +++TE G
Sbjct: 729 FLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 787

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D  +Y++++  L + G + +A  L++EM+ +G+ PD +     ++     G  D+A+
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847

Query: 241 ELQNEMMGRGL 251
            +   M+  G+
Sbjct: 848 GIYTNMIRSGV 858



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 123/236 (52%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I++ L    +F  ++ L  +M ++G+  +  + T  + AY ++     A  L+  M    
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++ + V + VL+ GLCK+  V+EA++    M + G+  +   Y  L+ G C+   +E A 
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 288

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            +  +M +   +P     + +ID   K E  +EA +L  ++ ++G+  ++ AY +L+  L
Sbjct: 289 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKL 348

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +     +A  LF EM GRG+ P+E+    L+    +RG +++A+ L ++M  +G+
Sbjct: 349 CKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 1/188 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC       ++LL  EM    +  N       +D +   G+  +A  L   ML
Sbjct: 691 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML 750

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  ++V+F +LI GLCK+G ++EAID   ++ + G  P+   Y+ +I  LCK   I 
Sbjct: 751 QGHL-ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L++EM  + + PD  AY   I     H    +AL +   M   GV  + + Y +L+
Sbjct: 810 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869

Query: 193 WGLSRCGH 200
            G+S   H
Sbjct: 870 SGISLMLH 877



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 9/254 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D  +Y   I   C     + ++ L+  M+  G+ A+ V    LM    K   
Sbjct: 189 MLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMR 248

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + + M++  +    VT+  L+ G C+   +  A+     M   G  P+ A  + 
Sbjct: 249 VQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSF 308

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID L KK  +E A +L  ++    M+P+  AY ALID   K+E F +A  L   M   G
Sbjct: 309 MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRG 368

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y  L+  L + G +++A  LF +M  +GI        SL+  + ++G++D A 
Sbjct: 369 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRA- 427

Query: 241 ELQNEMMGRGLLSG 254
                   RGLLSG
Sbjct: 428 --------RGLLSG 433



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 119/276 (43%), Gaps = 35/276 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C + K +++  L  +M ++ +  N V    +++ Y   G   +A  L D+M+
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540

Query: 73  DSRIEVTVVTFCVLIDGLC-----------------------------------KSGLVR 97
           +  ++    T+  LI GLC                                   + G   
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 600

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           E    +  M   G+  ++  +T ++    K++  E++  LF EM ++ + PD   YT +I
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D   K E+  +ALN  ++M   G   +   +T L+  L + G+L  A +L  EM+   +L
Sbjct: 661 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           P++      L      G+M++A +L + M+   L S
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS 756



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%)

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L S I V   T   ++  L K      A D F +M   G+H +  VYTA I   C+   +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + AR L   M    +      Y  L+ G  K+   +EA+ +KN M  +GV  D   Y +L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           V+G  R   L+ A  + H+MI  G +P E  C  ++ +  ++  ++EA  L  ++   G+
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 252 L 252
           +
Sbjct: 335 V 335



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 61/118 (51%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A +  +  +I GLC   K +++  L+S++ E+G + + +  +T++    K G+ ++A  L
Sbjct: 755 ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFEL 814

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +EML   ++  VV + + I      G   +A+  +  M   G+ PN   Y AL+ G+
Sbjct: 815 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 67/148 (45%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+  N    + ++  L K      AR+LFD+M +  +  D   YTA I  Y +  +   A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L  RM   GV      Y  L++GL +   +QEA  + + M+  G+  DE+   +L+  
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGSKN 257
                 ++ A+ + ++M+  G +    N
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEAN 305


>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61400-like [Glycine max]
          Length = 498

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 10/260 (3%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I +D+  Y  +I GLC   + E++  L+ +M E  + AN+V    ++D   K G+  +A+
Sbjct: 201 IFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAI 260

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M +  IE  V+TF +LIDG C  G VR A+  +  M   G+ P+V  YTALIDG 
Sbjct: 261 EVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGH 320

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD- 184
           CK    + A  L  EM    + P+    + +IDG LK     +A+ +    T  G   D 
Sbjct: 321 CKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDK 380

Query: 185 ---------LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
                       Y  L+ GL   G + +A   F EM   G  PD ++ +++L+ H++  +
Sbjct: 381 MDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKH 440

Query: 236 MDEAIELQNEMMGRGLLSGS 255
           M + + L  +M+  G++  +
Sbjct: 441 MIDVMMLHADMVKMGVIQNT 460



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 132/312 (42%), Gaps = 61/312 (19%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVIC------------ 48
           M  +     +  YG ++   C +  F +++ +  EM E G+  N VI             
Sbjct: 30  MMSRRFSPTVITYGILMNCCCAQGDFSNAQKVFDEMLERGIEPNVVIYGQMGEAEGVFGR 89

Query: 49  --------------TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
                          TLMD Y   G+      L  +ML   +   VVTF  LID L K G
Sbjct: 90  MRESGVVTPNLYTYKTLMDGYSMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMG 149

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK--------------KNC---------- 130
            ++ A + F  M  F + PN   Y +LI G CK              + C          
Sbjct: 150 DLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYN 209

Query: 131 -----------IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
                      +E A  L ++M + ++  ++  +  +IDG  K    ++A+ + ++MTE 
Sbjct: 210 ILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEE 269

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            ++ ++  ++ L+ G    G+++ A  L+ EM+ +GI+PD +   +L+  H + GN  EA
Sbjct: 270 XIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEA 329

Query: 240 IELQNEMMGRGL 251
             L  EM+  GL
Sbjct: 330 FRLHKEMLDAGL 341



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 102/201 (50%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           +L+  Y KAG+  EA+ L  EM    I   VVT+ +LI GLC    + EA+    +M + 
Sbjct: 175 SLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEV 234

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
            +  N   +  +IDG CK   +E+A  +  +M +  + P+   ++ LIDG+    + + A
Sbjct: 235 EVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAA 294

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           + L   M   G+  D+  YT+L+ G  + G+ +EA  L  EM+  G+ P+      ++  
Sbjct: 295 MGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDG 354

Query: 230 HYERGNMDEAIELQNEMMGRG 250
             + G  ++AI++  E  G G
Sbjct: 355 LLKDGRTNDAIKMFLEKTGAG 375



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 10/226 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ ++  +  +I G C +     +  L +EM   G+  + V  T L+D + K G 
Sbjct: 266 MTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGN 325

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF----------GRMPDFG 110
             EA  L  EMLD+ +   + T   +IDGL K G   +AI  F           +M    
Sbjct: 326 TKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRF 385

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PN  +Y  LI GLC+   I +A   F EM      PD   Y  ++  + + +   + +
Sbjct: 386 CSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVM 445

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
            L   M ++GV  +   Y  L  G    G+L+ A +    ++  GI
Sbjct: 446 MLHADMVKMGVIQNTFIYRVLSRGYRENGYLKSALMCSEYLMEYGI 491



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 11/207 (5%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  L+    K         +  +M+  R   TV+T+ +L++  C  G    A   F  M 
Sbjct: 7   CNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKVFDEML 66

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESF 166
           + G+ PNV +Y  +            A  +F  M +  ++ P+   Y  L+DGY      
Sbjct: 67  ERGIEPNVVIYGQM----------GEAEGVFGRMRESGVVTPNLYTYKTLMDGYSMMGDV 116

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           K    L   M + G+  D+  + +L+  L + G L+ A   F  M    ++P+     SL
Sbjct: 117 KRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSL 176

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLLS 253
           +  + + G++ EA+ L+ EM   G+ S
Sbjct: 177 IHGYCKAGDLLEAMWLRLEMERCGIFS 203



 Score = 40.8 bits (94), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 22/101 (21%), Positives = 50/101 (49%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I GLC +     +    +EMK NG   + ++  T++ A+F++    + + L  +M
Sbjct: 392 MYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMMLHADM 451

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH 112
           +   +      + VL  G  ++G ++ A+     + ++G+H
Sbjct: 452 VKMGVIQNTFIYRVLSRGYRENGYLKSALMCSEYLMEYGIH 492


>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 418

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P+ +
Sbjct: 377 LKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVV 417



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM  + K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+HP+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A  L  EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMI 338



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 116/221 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L S M+ +G+  +    + L++   K  +  +A  L DEMLB+ +    VTF  LIDG C
Sbjct: 193 LKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A +L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  +  D  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYV 413



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 119/244 (48%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A L  +  ++   C E +   ++ +   + + GL  + V   TLM+ Y K G+  E   L
Sbjct: 134 ASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRL 193

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
              M  S +   V T+ VLI+GLCK   + +A + F  M B GL PN   +T LIDG CK
Sbjct: 194 KSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCK 253

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              ++ A  ++ +M  + ++PD   Y  LI G  K    K+A +L + M+  G+  D   
Sbjct: 254 NGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 313

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+L+ G  + G L+ A      MI   I  D++   +L+    + G   +A ++  EM+
Sbjct: 314 YTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 248 GRGL 251
             GL
Sbjct: 374 SVGL 377



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 104/210 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +I+ L K    +    +
Sbjct: 64  SDXYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+   CK+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 IGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +L+  H + G +D A+E+  +M+ + LL
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLL 273


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 121/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC          L  EM E G+  N    T L++ + K  +  EA  L D+M+
Sbjct: 469 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 528

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           DS +    VTF V+I+G C  G +R+A   + +M + GL P+   Y +LI GLC  + + 
Sbjct: 529 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 588

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A     ++     + +  + TAL+ G+ +   F E  +L + M   GV LDL ++T +V
Sbjct: 589 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 648

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +   +    +++ VLF EM  +G+ PD+I    ++    +  NM +A+   ++M+  G
Sbjct: 649 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG 706



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +KA    Y  +++GLC   + +++  + + M   G+TA+ V   TL+  + +  E
Sbjct: 247 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 306

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +M+      +      +ID L K  LV EA     ++ D G+ PNV  Y A
Sbjct: 307 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 366

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK    + A  LF EM  R + P+   Y  LI    K    ++AL L ++M + G
Sbjct: 367 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 426

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + + +  Y SL+ G  + G L  AR L   M+  G+ P       L+      G++   +
Sbjct: 427 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 486

Query: 241 ELQNEMMGRGL 251
           EL  EM  RG+
Sbjct: 487 ELHREMAERGI 497



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ ++ +   Y  +I  LC     ED+  L  +M++ G+        +L++ Y K G 
Sbjct: 387 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 446

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL  M+   +  T  ++  LI GLC++G +   ++    M + G+  N   +TA
Sbjct: 447 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTA 506

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A  LFD+M   ++IP+   +  +I+GY    + ++A  L ++M E+G
Sbjct: 507 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 566

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y SL+ GL     + +A     ++     + +     +LL   +  G   E  
Sbjct: 567 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 626

Query: 241 ELQNEMMGRGL 251
            L +EM  RG+
Sbjct: 627 HLWDEMAVRGV 637



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 115/225 (51%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E++  L  ++ + G+  N      L+D   K     +A  L  EM    +E   VT+ +L
Sbjct: 343 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 402

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I  LCK G++ +A+  F +M D G+   V  Y +LI+G CK+  ++RAR L   M K  +
Sbjct: 403 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 462

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P   +Y+ LI G  ++      + L   M E G+  +   +T+L+ G  +   + EA  
Sbjct: 463 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 522

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           LF +MI   ++P+E+    +++ +   GN+ +A +L ++M+  GL
Sbjct: 523 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 567



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 107/215 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC   +F+D+  L  EM   GL  N V    L+ A  K G   +AL L D+M 
Sbjct: 364 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 423

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I+VTV  +  LI+G CK G +  A      M   GL P  A Y+ LI GLC+   + 
Sbjct: 424 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 483

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L  EM +R +  +   +TALI+G+ K +   EA  L ++M +  V  +   +  ++
Sbjct: 484 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 543

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            G    G++++A  L+ +M+  G+ PD     SL+
Sbjct: 544 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 578



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 114/247 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + AD   Y T+++G C   + E +  +  +M   G   +   C+ ++D   K     EA 
Sbjct: 287 VTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAF 346

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  ++ D  +   V  +  LID LCK+    +A   F  M   GL PN   Y  LI  L
Sbjct: 347 SLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHAL 406

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  IE A  LFD+M  + +      Y +LI+GY K  S   A  L + M + G+    
Sbjct: 407 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 466

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            +Y+ L+ GL R G L     L  EM  RGI  +     +L+    +   MDEA  L ++
Sbjct: 467 ASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 526

Query: 246 MMGRGLL 252
           M+   ++
Sbjct: 527 MIDSNVI 533



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 123/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K DL  +  I++    +   E S +L  EMKE G+  + +  T ++DA  K   
Sbjct: 632 MAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEEN 691

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+  D+M+        VT  VLI+ LCKSG +  A      M    + PN   Y  
Sbjct: 692 MIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC 751

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +D    +  +E+A++L   M  +  +    ++  LI G  K    +EA++L +++TE G
Sbjct: 752 FLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 810

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D  +Y++++  L + G + +A  L++EM+ +G+ PD +     ++     G  D+A+
Sbjct: 811 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 870

Query: 241 ELQNEMMGRGL 251
            +   M+  G+
Sbjct: 871 GIYTNMIRSGV 881



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 123/236 (52%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I++ L    +F  ++ L  +M ++G+  +  + T  + AY ++     A  L+  M    
Sbjct: 192 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 251

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++ + V + VL+ GLCK+  V+EA++    M + G+  +   Y  L+ G C+   +E A 
Sbjct: 252 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 311

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            +  +M +   +P     + +ID   K E  +EA +L  ++ ++G+  ++ AY +L+  L
Sbjct: 312 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKL 371

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +     +A  LF EM GRG+ P+E+    L+    +RG +++A+ L ++M  +G+
Sbjct: 372 CKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 427



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 1/184 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC       ++LL  EM    +  N       +D +   G+  +A  L   ML
Sbjct: 714 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML 773

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  ++V+F +LI GLCK+G ++EAID   ++ + G  P+   Y+ +I  LCK   I 
Sbjct: 774 QGHL-ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 832

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L++EM  + + PD  AY   I     H    +AL +   M   GV  + + Y +L+
Sbjct: 833 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 892

Query: 193 WGLS 196
            G+S
Sbjct: 893 SGIS 896



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 9/254 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D  +Y   I   C     + ++ L+  M+  G+ A+ V    LM    K   
Sbjct: 212 MLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMR 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + + M++  +    VT+  L+ G C+   +  A+     M   G  P+ A  + 
Sbjct: 272 VQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSF 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID L KK  +E A +L  ++    M+P+  AY ALID   K+E F +A  L   M   G
Sbjct: 332 MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRG 391

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y  L+  L + G +++A  LF +M  +GI        SL+  + ++G++D A 
Sbjct: 392 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRA- 450

Query: 241 ELQNEMMGRGLLSG 254
                   RGLLSG
Sbjct: 451 --------RGLLSG 456



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 35/276 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C + K +++  L  +M ++ +  N V    +++ Y   G   +A  L D+M+
Sbjct: 504 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 563

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDY----------------------FGRMPDF- 109
           +  ++    T+  LI GLC +  V +A ++                      F R   F 
Sbjct: 564 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 623

Query: 110 ------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                       G+  ++  +T ++    K++  E++  LF EM ++ + PD   YT +I
Sbjct: 624 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 683

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D   K E+  +ALN  ++M   G   +   +T L+  L + G+L  A +L  EM+   +L
Sbjct: 684 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 743

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           P++      L      G+M++A +L + M+   L S
Sbjct: 744 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS 779



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%)

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L S I V   T   ++  L K      A D F +M   G+H +  VYTA I   C+   +
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + AR L   M    +      Y  L+ G  K+   +EA+ +KN M  +GV  D   Y +L
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           V+G  R   L+ A  + H+MI  G +P E  C  ++ +  ++  ++EA  L  ++   G+
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 252 L 252
           +
Sbjct: 358 V 358



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 61/118 (51%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A +  +  +I GLC   K +++  L+S++ E+G + + +  +T++    K G+ ++A  L
Sbjct: 778 ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFEL 837

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +EML   ++  VV + + I      G   +A+  +  M   G+ PN   Y AL+ G+
Sbjct: 838 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 67/148 (45%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+  N    + ++  L K      AR+LFD+M +  +  D   YTA I  Y +  +   A
Sbjct: 181 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 240

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L  RM   GV      Y  L++GL +   +QEA  + + M+  G+  DE+   +L+  
Sbjct: 241 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 300

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGSKN 257
                 ++ A+ + ++M+  G +    N
Sbjct: 301 FCRMEELEMALRITHDMIRLGFVPSEAN 328


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 107/201 (53%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           LM    ++G+ + A ++ DEML   ++ TVVTF  L+ G+CK+  +  A    G M   G
Sbjct: 120 LMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAG 179

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+V  Y A I GLCK   I+ A  +F+EM +R + P+T   T LID + K       L
Sbjct: 180 IAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGL 239

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L+  M   GV  DL AY +LV G  R   ++ A  +  EM   G+ PD++   +L+   
Sbjct: 240 ELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGC 299

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + G +D A+E++ EM   G+
Sbjct: 300 CKEGELDTAMEMKQEMSDEGV 320



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  YG  I GLC   + +D+  +  EM E GL  NTV+ TTL+DA+ K G+
Sbjct: 175 MAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 234

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +  L L  EM    ++  +V +  L++G C+   ++ A D    M   GL P+   YT 
Sbjct: 235 VTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTT 294

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  ++ A  +  EM    +  D   YTALI G  K     +A  +   M E G
Sbjct: 295 LIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAG 354

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT ++    + G ++       EM  +G  P  +    ++      G M  A 
Sbjct: 355 LQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNAD 414

Query: 241 ELQNEMMGRGL 251
            L N M+  G+
Sbjct: 415 MLLNAMLNIGV 425



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 116/247 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++  +  + T++ G+C  S   ++  L   M + G+  +       +    K G   +
Sbjct: 143 RGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQD 202

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ + +EM +  +    V    LID  CK G V   ++    M   G+  ++  Y AL++
Sbjct: 203 AMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVN 262

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C+   ++ A ++ +EM K  + PD   YT LIDG  K      A+ +K  M++ GV L
Sbjct: 263 GFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVAL 322

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D   YT+L+ GLS+ G   +A  +  EM+  G+ PD      ++    + G++    +  
Sbjct: 323 DDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHL 382

Query: 244 NEMMGRG 250
            EM  +G
Sbjct: 383 KEMQNKG 389



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 3/233 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +KADL  Y  ++ G C     + +  ++ EM+++GL  + V  TTL+D   K GE
Sbjct: 245 MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGE 304

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  EM D  + +  VT+  LI GL K+G   +A      M + GL P+   YT 
Sbjct: 305 LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTM 364

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  CK   ++       EM  +   P    Y  +++G+      K A  L N M  +G
Sbjct: 365 VIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIG 424

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
           V  +   Y  L+ G  + G +++   L      +G++ D  +  SL+ +  ++
Sbjct: 425 VCPNDITYNILLDGHCKHGKVRDTEELKS---AKGMVSDFGVYTSLINEFVKK 474



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 3/205 (1%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           + + +   Y   G   +  SLL   L   I V +  +  L++ L     V EA  ++  +
Sbjct: 49  LVSAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMNRLPS---VPEAYAFYLHL 105

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            D G+ P    +  L+  + +   +  ARN+FDEM +R + P    +  L+ G  K    
Sbjct: 106 LDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDL 165

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
             A  L+  M + G+  D+  Y + + GL + G +Q+A  +F EM  RG+ P+ ++  +L
Sbjct: 166 NNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTL 225

Query: 227 LKKHYERGNMDEAIELQNEMMGRGL 251
           +  H + G++   +EL+ EM  RG+
Sbjct: 226 IDAHCKEGDVTAGLELRWEMATRGV 250


>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 393

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 130/264 (49%), Gaps = 14/264 (5%)

Query: 1   MKGKNIKADLPLYGTIIW--------------GLCIESKFEDSKLLLSEMKENGLTANTV 46
           M  K I  D+  Y T+I+              G  I  + +++  LL++M    +T N  
Sbjct: 65  MIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIR 124

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
             TTL+D   K GE  +A ++L  M+  R+E  +VT+  L+DG      V +A   F  +
Sbjct: 125 TFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTI 184

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G+ PNV  Y  +I+GLCK   ++ A NLF EM  ++M+PDT AY +LIDG  K    
Sbjct: 185 SLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRI 244

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
            +  +    M + G   ++  Y SL+ GL +   + +A  L  ++  +GI P+      L
Sbjct: 245 YDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTIL 304

Query: 227 LKKHYERGNMDEAIELQNEMMGRG 250
           +    + G + +A E+  +++ +G
Sbjct: 305 VDGLCKNGRLRDAQEVYQDLLNKG 328



 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 129/246 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  ++  + T++ GLC + + + ++ +L+ M +  +  N V   +LMD YF   E
Sbjct: 114 MTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKE 173

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L + +    +   V ++ V+I+GLCK+ +V EA + F  M    + P+   Y +
Sbjct: 174 VNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNS 233

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I    +   EM  R    +   Y +L+DG  K+    +A+ L  ++   G
Sbjct: 234 LIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQG 293

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  YT LV GL + G L++A+ ++ +++ +G   D  +   ++    + G +DEA+
Sbjct: 294 IRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEAL 353

Query: 241 ELQNEM 246
            L ++M
Sbjct: 354 SLLSKM 359



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 83/157 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  D   Y ++I GLC   +  D    + EM + G  AN +   +L+D   K  +
Sbjct: 219 MHSKNMVPDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQ 278

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++LL ++ +  I   + T+ +L+DGLCK+G +R+A + +  + + G   +  +YT 
Sbjct: 279 VDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTV 338

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +I+GLCK+  ++ A +L  +M      PD   Y   I
Sbjct: 339 MINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEITI 375



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 24/187 (12%)

Query: 89  GLCKSGLVREAIDYFGRMPDFGLH----------PNVAVYTALIDGLCKKNCIERARNLF 138
           GLC +G VR+A+ +   +   G H          P+V +Y  +ID LCK   +    +L+
Sbjct: 3   GLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCDLY 62

Query: 139 DEMPKRDMIPDTTAYTALIDGYL--------KHESF------KEALNLKNRMTEVGVDLD 184
            EM  + + PD   Y  LI   L        K   F      KEA+ L N+MT   V  +
Sbjct: 63  SEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPN 122

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  +T+LV GL + G +++AR +   MI + + P+ +   SL+  ++    +++A +L N
Sbjct: 123 IRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFN 182

Query: 245 EMMGRGL 251
            +  RG+
Sbjct: 183 TISLRGM 189



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 61/125 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +   A++  Y +++ GLC   + + +  LL+++K  G+  N    T L+D   K G 
Sbjct: 254 MHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDGLCKNGR 313

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +  ++L+   ++    + V+I+GLCK G + EA+    +M D    P+   Y  
Sbjct: 314 LRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPDGVTYEI 373

Query: 121 LIDGL 125
            I  L
Sbjct: 374 TIRAL 378



 Score = 42.4 bits (98), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 48/93 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K + I+ ++  Y  ++ GLC   +  D++ +  ++   G   +  I T +++   K G 
Sbjct: 289 IKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGF 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS 93
             EALSLL +M D++     VT+ + I  L +S
Sbjct: 349 LDEALSLLSKMEDNKCTPDGVTYEITIRALFES 381


>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 664

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 125/248 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  + ++++G C E K  ++K +L ++KE G   + V+   L+  Y +AG+  +A  LL
Sbjct: 268 NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLL 327

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM          +F +LI   CK+  + EA+  F  M   G   +V  YT LI G CK 
Sbjct: 328 AEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKW 387

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              ++A  + D+M ++   P   +Y  ++  + K E  +E + L   M ++G   DLN Y
Sbjct: 388 GNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIY 447

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  + + G L+EA  L+ EM   G+ P     I ++     +G + EA +   EM+ 
Sbjct: 448 NTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVE 507

Query: 249 RGLLSGSK 256
           RGLLS  +
Sbjct: 508 RGLLSAPQ 515



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 2/240 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           +Y  +I  L    +F     L+ EM KEN       +   LM  +       +A+ +LDE
Sbjct: 166 VYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDE 225

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M     E     F  L+D LCK+G V+EA   F  M     +PN+  +T+L+ G C++  
Sbjct: 226 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RVRFNPNLRHFTSLLYGWCREGK 284

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           I  A+++  ++ +    PD   Y  L+ GY +    ++A +L   M +V    +  ++T 
Sbjct: 285 IMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTI 344

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+    +   + EA  +F EM G G   D +   +L+    + GN D+A E+ ++M+ +G
Sbjct: 345 LIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKG 404



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 99/217 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K    + D+ +Y  ++ G     K  D+  LL+EMK+     N    T L+ ++ K  +
Sbjct: 295 IKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEK 354

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM  S  E  VVT+  LI G CK G   +A +    M   G  P+   Y  
Sbjct: 355 MDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLC 414

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    KK  +E    L +EM K   +PD   Y  +I    K    KEA+ L   M   G
Sbjct: 415 IMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGG 474

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           ++  L+ Y  +V G    G L EA   F EM+ RG+L
Sbjct: 475 LNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLL 511



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 1/248 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D  ++G ++  LC     +++  L  +M+      N    T+L+  + + G+  EA  
Sbjct: 232 EPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREGKIMEAKH 290

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L ++ ++  E  +V +  L+ G  ++G +R+A D    M      PN A +T LI   C
Sbjct: 291 VLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFC 350

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   ++ A  +F EM       D   YT LI G+ K  +  +A  + + M + G D    
Sbjct: 351 KTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQL 410

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +Y  ++    +   L+E   L  EM   G +PD  +  ++++   + G++ EA+ L  EM
Sbjct: 411 SYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEM 470

Query: 247 MGRGLLSG 254
              GL  G
Sbjct: 471 QAGGLNPG 478



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 2/221 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G   +AD+  Y T+I G C     + +  +L +M + G   + +    +M A+ K  E
Sbjct: 365 MQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEE 424

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L++EM        +  +  +I  +CK G ++EA+  +G M   GL+P +  Y  
Sbjct: 425 LEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYIL 484

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           ++ G   + C+  A + F EM +R ++  P       L +  L+ E  + A N+ + MT 
Sbjct: 485 MVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTT 544

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            G +L+++A+T  +  L   GH++EA     +M+   ++P 
Sbjct: 545 KGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQ 585


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 128/246 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  +L  Y  ++  LC + + +D+  +  EM+E G++ N V   TL+    +  +
Sbjct: 259 MQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  ++D+M    I   ++T+  LIDG C    + +A+     +   GL P++  Y  
Sbjct: 319 ANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CKK     A  +  EM +R + P    YT LID + + ++ ++A+ L++ M E+G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D++ Y+ L+ G    G + EA  LF  M+ +   P+E++  +++  + + G+   A+
Sbjct: 439 LTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRAL 498

Query: 241 ELQNEM 246
            L  EM
Sbjct: 499 RLFREM 504



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 117/243 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y T+I G C + + E +K L  EM + GL AN    T L+   FK G   +   + 
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMY 256

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M +  +   + T+  +++ LCK G  ++A   F  M + G+  N+  Y  LI GLC++
Sbjct: 257 EKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCRE 316

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A  + D+M    + P+   Y  LIDG+       +AL+L   +   G+   L  Y
Sbjct: 317 MKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTY 376

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             LV G  + G    A  +  EM  RGI P ++    L+       NM++AI+L++ M  
Sbjct: 377 NILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEE 436

Query: 249 RGL 251
            GL
Sbjct: 437 LGL 439



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 123/243 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +G +I G C   + E S  LL E++E G + N VI TTL+D   K GE  +A  L 
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM    +     T+ VLI GL K+G+ ++  + + +M + G+ PN+  Y  +++ LCK 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKD 281

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + A  +FDEM +R +  +   Y  LI G  +     EA  + ++M   G++ +L  Y
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITY 341

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G      L +A  L  ++  RG+ P  +    L+    ++G+   A ++  EM  
Sbjct: 342 NTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 249 RGL 251
           RG+
Sbjct: 402 RGI 404



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 120/247 (48%), Gaps = 5/247 (2%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K    LY  II         + S    +EM + G    +     L+     +   ++   
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC 150

Query: 67  LLDEMLDSRIEVT--VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             +E   S+I+V   V +F ++I G C++G + ++ D    + +FG  PNV +YT LIDG
Sbjct: 151 FFNE---SKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDG 207

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CKK  IE+A++LF EM K  ++ +   YT LI G  K+   K+   +  +M E GV  +
Sbjct: 208 CCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPN 267

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           L+ Y  ++  L + G  ++A  +F EM  RG+  + +   +L+         +EA E+ +
Sbjct: 268 LHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMD 327

Query: 245 EMMGRGL 251
           +M   G+
Sbjct: 328 QMKSDGI 334



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 115/240 (47%), Gaps = 2/240 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  +L  Y T+I G C   K   +  L  ++K  GL+ + V    L+  + K G+
Sbjct: 329 MKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGD 388

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  ++ EM +  I+ + VT+ +LID   +S  + +AI     M + GL P+V  Y+ 
Sbjct: 389 TSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSV 448

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C K  +  A  LF  M ++   P+   Y  ++ GY K  S   AL L   M E  
Sbjct: 449 LIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKE 508

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP-DEIL-CISLLKKHYERGNMDE 238
           +  ++ +Y  ++  L +    +EA  L  +MI  GI P D IL  IS  K      +MDE
Sbjct: 509 LPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRAKNDSHSRSMDE 568



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 110/231 (47%), Gaps = 8/231 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  ++  Y T+I GLC E K  ++  ++ +MK +G+  N +   TL+D +    +
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRK 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +ALSL  ++    +  ++VT+ +L+ G CK G    A      M + G+ P+   YT 
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTI 413

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   + + +E+A  L   M +  + PD   Y+ LI G+       EA  L   M E  
Sbjct: 414 LIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK 473

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD--------EILC 223
            + +   Y ++V G  + G    A  LF EM  + + P+        E+LC
Sbjct: 474 FEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  121 bits (304), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 124/240 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  + K +  +Y  +I   C +   + +  LL+EMK+  +  +    +TL+DA  K  +
Sbjct: 204 MEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +L  EM+   I   V TF  +IDGLCK G V +A +    M + G+ P+V  Y  
Sbjct: 264 WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNM 323

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG   +  ++RAR +FD M  + + P+  +Y  LI+GY + +   EA+ +   +++ G
Sbjct: 324 IIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKG 383

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +     L+ GL   G  + A+  F EM+  G +PD     +LL  +++ G ++EA+
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM 443



 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 132/252 (52%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           NI  ++  + ++I GLC E K ED++ ++  M E G+  + +    ++D Y   G+   A
Sbjct: 278 NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRA 337

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             + D M++  IE  ++++ +LI+G  +   + EA+     +   GL P++     L+ G
Sbjct: 338 REIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHG 397

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L +    + A+N FDEM     IPD   +  L+ GY K+   +EA++  +++     D +
Sbjct: 398 LFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTN 457

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  YT+++ GL + G L +A   F ++   G+ PD I   +++  + + G +DEA ++  
Sbjct: 458 IQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR 517

Query: 245 EMMGRGLLSGSK 256
           +M   G L+ ++
Sbjct: 518 KMEDNGCLADNR 529



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 109/216 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+I+ ++  Y  +I G   + K +++  +  E+ + GL  + V C  L+   F+ G 
Sbjct: 344 MINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGR 403

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +  DEML +     + T C L+ G  K+GLV EA+ +F ++       N+ +YTA
Sbjct: 404 TKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTA 463

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   +++A   F+++P   + PD   YTA+I GY +     EA ++  +M + G
Sbjct: 464 VIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
              D   Y  +V G  R   + E +    E+ G+  
Sbjct: 524 CLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSF 559



 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 123/249 (49%), Gaps = 1/249 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPS 62
           K I  +  ++ T++ GL  E+K +D+  L  ++ +EN    N V+  T+M+   K G   
Sbjct: 136 KGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQ 195

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  LL  M     +     + ++ID  CK G++  A      M    + P++  Y+ LI
Sbjct: 196 KAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK +  E  R LF EM   ++ P+   + ++IDG  K    ++A  +   M E GVD
Sbjct: 256 DALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVD 315

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y  ++ G    G +  AR +F  MI + I P+ I    L+  +  +  +DEA+++
Sbjct: 316 PDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQV 375

Query: 243 QNEMMGRGL 251
             E+  +GL
Sbjct: 376 CREISQKGL 384



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 116/239 (48%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +YGT++ GLC +   + +  LL  M++     NT I + ++DA+ K G    A SLL+EM
Sbjct: 180 MYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEM 239

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               I   + T+  LID LCK          F  M    ++PNV  + ++IDGLCK+  +
Sbjct: 240 KQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKV 299

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  +   M ++ + PD   Y  +IDGY        A  + + M    ++ ++ +Y  L
Sbjct: 300 EDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNIL 359

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + G +R   + EA  +  E+  +G+ P  + C  LL   +E G    A    +EM+  G
Sbjct: 360 INGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418



 Score = 46.6 bits (109), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/150 (20%), Positives = 65/150 (43%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL  + T++ G       E++     +++      N  I T ++D   K G+  +A +  
Sbjct: 422 DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATF 481

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +++    +   V+T+  +I G C+ GL+ EA D   +M D G   +   Y  ++ G  + 
Sbjct: 482 EKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRS 541

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID 158
           N +   +   +E+  +    +      L+D
Sbjct: 542 NKVSEMKAFLEEIAGKSFSFEAATVELLMD 571



 Score = 37.4 bits (85), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 22/100 (22%), Positives = 47/100 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y  +I G C E   +++K +L +M++NG  A+      ++  + ++ + SE  
Sbjct: 489 LHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMK 548

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
           + L+E+          T  +L+D + +   +   I  F R
Sbjct: 549 AFLEEIAGKSFSFEAATVELLMDIIAEDPSLLNMIPEFHR 588


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 137/283 (48%), Gaps = 36/283 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVIC-TTLMDAYFKAG 59
           M     + DL  Y  +  GLC   K +++  L  EM++ G+ +  V+   TL+DA FK  
Sbjct: 305 MTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQ 364

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             S+AL+LL+EM +  ++ ++VT  +++ GLC+ G + EA+     M + GL P+V  Y 
Sbjct: 365 RSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYN 424

Query: 120 ALIDGLCKKNCIERARNLFDEM-----------------------------------PKR 144
            LID  CK   + +A  L DEM                                   P+R
Sbjct: 425 TLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQR 484

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
             +PD  +Y  ++  Y K    + AL L + M +  +   ++ Y +L+ GLS  G L EA
Sbjct: 485 GFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEA 544

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
               +E++  G++PD+     ++  + + G++++A +  N+M+
Sbjct: 545 IDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMV 587



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 117/240 (48%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++   C +    D+   LS+M+  GL+ + V   TL++A+ + G   EA +LL  M 
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMK 271

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  T  T+  L+    + G +++A D    M  FG  P++  Y  L  GLC+   ++
Sbjct: 272 KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 331

Query: 133 RARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            A  L DEM +  ++ PD   Y  L+D   K +   +ALNL   M E GV   L  +  +
Sbjct: 332 EAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNII 391

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           V GL R G L+EA      M   G+ PD I   +L+    + GN+ +A  L +EM+  GL
Sbjct: 392 VKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGL 451



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 122/254 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K D     T+++ LC E ++E+++ LL    + G   + V   T+M AYFK  +
Sbjct: 446 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P  AL L DEM+  ++  ++ T+  LI GL   G + EAID    + + GL P+   Y  
Sbjct: 506 PEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNI 565

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   CK+  +E+A    ++M +    PD      L++G   +   ++A+ L     E G
Sbjct: 566 IIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKG 625

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +D+  Y +L+  L +   +  A   F +M  RG+ PD      LL    E G   EA 
Sbjct: 626 KKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQ 685

Query: 241 ELQNEMMGRGLLSG 254
           ++ +++   G L G
Sbjct: 686 KMLHKLNESGKLYG 699



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 123/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K+ L  +  I+ GLC E + E++   L  M E GLT + +   TL+DA  KAG 
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGN 435

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L+DEM+ S +++   T   L+  LCK     EA +     P  G  P+   Y  
Sbjct: 436 VAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGT 495

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    K+   E A  L+DEM KR + P  + Y  LI G        EA++  N + E+G
Sbjct: 496 VMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMG 555

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  ++    + G L++A    ++M+     PD + C +L+      G +++A+
Sbjct: 556 LVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAM 615

Query: 241 ELQNEMMGRG 250
           +L    + +G
Sbjct: 616 KLFESWVEKG 625



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 122/287 (42%), Gaps = 36/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G  +  D   Y T++   C +    +++ LL+ MK+ G+        TL+ AY + G 
Sbjct: 235 MQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGW 294

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGL-HPNVAVYT 119
             +A  +++ M     E  + T+ VL  GLC++G V EA      M   G+  P+V  Y 
Sbjct: 295 IKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYN 354

Query: 120 ALID-----------------------------------GLCKKNCIERARNLFDEMPKR 144
            L+D                                   GLC++  +E A    + M + 
Sbjct: 355 TLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEE 414

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   Y  LID   K  +  +A  L + M   G+ +D     +L++ L +    +EA
Sbjct: 415 GLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 474

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L      RG +PDE+   +++  +++    + A+ L +EM+ R L
Sbjct: 475 EELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKL 521



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 1/195 (0%)

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P  +L     ++  R+     TF +L+   C  G + +A+    +M  FGL P+   Y  
Sbjct: 190 PQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNT 249

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++  C+K  +  AR L   M K  ++P    Y  L+  Y +    K+A ++   MT  G
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL-PDEILCISLLKKHYERGNMDEA 239
            + DL  Y  L  GL + G + EA  L  EM   GI+ PD +   +L+   ++     +A
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDA 369

Query: 240 IELQNEMMGRGLLSG 254
           + L  EM  +G+ S 
Sbjct: 370 LNLLEEMREKGVKSS 384



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 36/264 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   +  Y T+I GL    K  ++   L+E+ E GL  +      ++ AY K G+
Sbjct: 516 MIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGD 575

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A    ++M+++  +  VVT   L++GLC  G + +A+  F    + G   +V  Y  
Sbjct: 576 LEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNT 635

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK N ++ A   F +M  R + PD   Y  L+    +     EA  + +++ E G
Sbjct: 636 LIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG 695

Query: 181 ---------------------------VDL---------DLNAYTSLVWGLSRCGHLQEA 204
                                       D+         D  +Y   +  L   G L+EA
Sbjct: 696 KLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEA 755

Query: 205 RVLFHEMIGRGILPDEILCISLLK 228
           + +  EM+ +G+  D    I+L++
Sbjct: 756 KAVLDEMMQKGMSVDNSTYITLME 779



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 79/200 (39%), Gaps = 36/200 (18%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   + K D+    T++ GLC+  + E +  L     E G   + +   TL+ A  K  +
Sbjct: 586 MVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDND 645

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG------LHPN 114
              AL    +M    ++  V T+ VL+  L ++G   EA     ++ + G       +P+
Sbjct: 646 VDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPS 705

Query: 115 V-----AV-------------------------YTALIDGLCKKNCIERARNLFDEMPKR 144
           +     AV                         Y   I  LC    ++ A+ + DEM ++
Sbjct: 706 IKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQK 765

Query: 145 DMIPDTTAYTALIDGYLKHE 164
            M  D + Y  L++G +K +
Sbjct: 766 GMSVDNSTYITLMEGLIKRQ 785


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 124/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++  +  + TI+ GLC+E     +   +  +K+ G  ++      +++   K G  S AL
Sbjct: 92  VEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAAL 151

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S L +M +    + V  +  ++DGLCK G+V EA+D F +M   G+ PN+  Y  LI GL
Sbjct: 152 SYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGL 211

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  +  + A  L   M ++ ++PD   +  +   +LK      A ++ + M  +G++ ++
Sbjct: 212 CNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNV 271

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y S++        +++A  +F  MI +G LP+ +   SL+    E  NM++A+    E
Sbjct: 272 VTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGE 331

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 332 MVNNGL 337



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 112/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N   D+  Y  ++ GLC +    ++  L S+M   G+  N      L+        
Sbjct: 157 MEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDR 216

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M+   I   V TF V+     K+G++  A   F  M   G+  NV  Y +
Sbjct: 217 WKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNS 276

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   C  N ++ A  +FD M ++  +P+   Y +LI G+ + ++  +A+     M   G
Sbjct: 277 IIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNG 336

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D D+  +++L+ G  + G    A+ LF  M   G LPD   C  +L   ++     EA+
Sbjct: 337 LDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAM 396

Query: 241 ELQNEM 246
            L  E+
Sbjct: 397 SLFREL 402



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I+ +L  Y  +I GLC   +++++  LL+ M   G+  +      +   + K G 
Sbjct: 192 MTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGM 251

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A S+   M    IE  VVT+  +I   C    +++A++ F  M   G  PN+  Y +
Sbjct: 252 ISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNS 311

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+   + +A     EM    + PD   ++ LI G+ K      A  L   M + G
Sbjct: 312 LIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHG 371

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL     ++ GL +C    EA  LF E+       D I+   +L      G +++A+
Sbjct: 372 QLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDAL 431

Query: 241 ELQNEMMGRGL 251
           EL + +  +G+
Sbjct: 432 ELFSYLSSKGV 442



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 117/247 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K ++  +  +I  LC  +       +L  M + G+  + V  TT+++     G  ++A+
Sbjct: 57  VKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAI 116

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             +D + D   E    T   +I+GLCK G    A+ Y  +M +   + +V  Y+A++DGL
Sbjct: 117 RFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGL 176

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +  A +LF +M  + + P+   Y  LI G    + +KEA  L   M   G+  D+
Sbjct: 177 CKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDV 236

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +  +     + G +  A+ +F  M   GI  + +   S++  H     M +A+E+ + 
Sbjct: 237 QTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDL 296

Query: 246 MMGRGLL 252
           M+ +G L
Sbjct: 297 MIRKGCL 303



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 1/205 (0%)

Query: 16  IIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +++G+  + K   + + L+  M   G+  N      +++   +        S+L  M   
Sbjct: 31  LLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKI 90

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +E ++VTF  +++GLC  G V +AI +   + D G   +     A+I+GLCK      A
Sbjct: 91  GVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAA 150

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            +   +M +++   D TAY+A++DG  K     EAL+L ++MT  G+  +L  Y  L+ G
Sbjct: 151 LSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHG 210

Query: 195 LSRCGHLQEARVLFHEMIGRGILPD 219
           L      +EA  L   M+ +GI+PD
Sbjct: 211 LCNFDRWKEAAPLLANMMRKGIMPD 235



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 118/246 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ ++  Y +II   C+ ++ +D+  +   M   G   N V   +L+  + +    ++A+
Sbjct: 267 IEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAM 326

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             L EM+++ ++  VVT+  LI G CK+G    A + F  M   G  P++     ++DGL
Sbjct: 327 YFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGL 386

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K +    A +LF E+ K +   D   Y+ +++G        +AL L + ++  GV +D+
Sbjct: 387 FKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDV 446

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  ++ GL + G L +A  L  +M   G  PDE      ++    R  + ++ +    
Sbjct: 447 VTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMF 506

Query: 246 MMGRGL 251
           M G+G 
Sbjct: 507 MKGKGF 512



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 82/162 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  + T+I G C   K   +K L   M ++G   +   C  ++D  FK   
Sbjct: 332 MVNNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHF 391

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA+SL  E+     ++ ++ + ++++G+C SG + +A++ F  +   G+  +V  Y  
Sbjct: 392 HSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNI 451

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +I+GLCK+  ++ A +L  +M +    PD   Y   + G L+
Sbjct: 452 MINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLR 493



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 39/226 (17%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA------- 116
           AL    +M+  +    V  F +L   + K      AI     M   G+ PNV+       
Sbjct: 10  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVIN 69

Query: 117 ----------------------------VYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                                        +T +++GLC +  + +A    D +  +DM  
Sbjct: 70  CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHL--KDMGY 127

Query: 149 DTTAYT--ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           ++  YT  A+I+G  K      AL+   +M E   +LD+ AY+++V GL + G + EA  
Sbjct: 128 ESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALD 187

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           LF +M G+GI P+      L+          EA  L   MM +G++
Sbjct: 188 LFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIM 233


>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 118/248 (47%), Gaps = 1/248 (0%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G     D+  Y ++I G C   K  ++  LL +M   G+    V    L+D Y KAGE  
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A  +  +M+       VVTF  LIDG C+ G V +    +  M   G+ PN   Y+ LI
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC +N + +AR L  ++  +D+IP    Y  +IDG+ K     EA  +   M +    
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   +T L+ G    G + EA  +FH+M+  G  PD+I   SLL    + G   EA  L
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509

Query: 243 QNEMMGRG 250
            N++  +G
Sbjct: 510 -NQIARKG 516



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 3/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  +  L G ++     + K   +  LL +  E  +    ++  +L++   K   
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDR 186

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L DE L  +      TF +LI GLC  G   +A++  G M  FG  P++  Y  
Sbjct: 187 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI G CK N + +A  +F ++    +  PD   YT++I GY K    +EA +L + M  +
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+      +  LV G ++ G +  A  +  +MI  G  PD +   SL+  +   G + + 
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366

Query: 240 IELQNEMMGRGLLSGS 255
             L  EM  RG+   +
Sbjct: 367 FRLWEEMNARGMFPNA 382



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 1/229 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + ED+  L  E        +T     L+      G+  +AL LL  M     E  +VT+ 
Sbjct: 186 RVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYN 245

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGL-HPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            LI G CKS  + +A + F  +    +  P+V  YT++I G CK   +  A +L D+M +
Sbjct: 246 TLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
             + P    +  L+DGY K      A  ++ +M   G   D+  +TSL+ G  R G + +
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              L+ EM  RG+ P+      L+        + +A EL  ++  + ++
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 34/210 (16%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN--------------------- 114
           I  +  T+ +L   LCK+GL   A   F  M   G+ PN                     
Sbjct: 99  IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158

Query: 115 ------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
                         V  +L++ L K + +E A  LFDE  +     DT  +  LI G   
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-IGRGILPDEI 221
               ++AL L   M+  G + D+  Y +L+ G  +   L +A  +F ++  G    PD +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              S++  + + G M EA  L ++M+  G+
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGI 308


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 135/269 (50%), Gaps = 23/269 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN + ++  Y TII  LC + +  ++  L SEM   G++ +     +L+ A     E
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL+EM+DS+I   VV+F  ++D LCK G V EA D   +M   G+ PNV  YTA
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C  + ++ A  +FD M  +  +P+  +Y  LI+GY K +   +A++    M    
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXC 371

Query: 181 VDLDLN-------------------AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
             L+++                   +Y +L+ G  +   + +A  LF EM  + ++PD +
Sbjct: 372 CYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTV 431

Query: 222 LCISLLKK--HYERGNMDEAIELQNEMMG 248
              +L+    H ER  + +AI L +EM+ 
Sbjct: 432 TYSTLIHGLCHVER--LQDAIALFHEMVA 458



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 111/221 (50%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+++ + G   +T   TTL+      G+  EAL L D+M+       VVT+  LI+GLC
Sbjct: 118 VLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLC 177

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G    AI   G M      PNV  Y  +ID LCK   +  A NLF EM  + + PD  
Sbjct: 178 KVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIF 237

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y +LI        +K    L N M +  +  D+ ++ ++V  L + G + EA  +  +M
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 297

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           I RG+ P+ +   +L+  H     MDEA+++ + M+ +G +
Sbjct: 298 IQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 116/235 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I G+C+E K  ++  L  +M   G   + V   TL++   K G  S A+ 
Sbjct: 128 QPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 187

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL  M+    +  V  +  +ID LCK   V EA + F  M   G+ P++  Y +LI  LC
Sbjct: 188 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 247

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    L +EM    ++PD  ++  ++D   K     EA ++ ++M + GV+ ++ 
Sbjct: 248 NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVV 307

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            YT+L+ G      + EA  +F  M+ +G +P+ I   +L+  + +   +D+AI 
Sbjct: 308 TYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH 362



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 126/300 (42%), Gaps = 54/300 (18%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  + T++  LC E K  ++  ++ +M + G+  N V  T LMD +    E
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY------------------ 102
             EA+ + D M+       V+++  LI+G CK   + +AI Y                  
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVK 381

Query: 103 -FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
            F  M   G  PNV  Y  LI+G CK   I++A  LF EM ++++IPDT  Y+ LI G  
Sbjct: 382 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 441

Query: 162 KHESFKEALNLKNRMTEVG-----------------------------------VDLDLN 186
             E  ++A+ L + M                                       +D D+ 
Sbjct: 442 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 501

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
                + G+ R G L+ AR LF  +  +G+ PD      ++     RG +DEA +L  EM
Sbjct: 502 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 561



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 3/231 (1%)

Query: 24  SKFEDSKLLLS---EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           +K +    LLS   +M   G+  N      L++++        A S+L ++L    +   
Sbjct: 72  AKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDT 131

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
            TF  LI G+C  G + EA+  F +M   G  P+V  Y  LI+GLCK      A  L   
Sbjct: 132 ATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 191

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M +++  P+  AY  +ID   K     EA NL + M   G+  D+  Y SL+  L     
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +    L +EM+   I+PD +   +++    + G + EA ++ ++M+ RG+
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 96/207 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + + +  L  EM    L  +TV  +TL+          +A++L  EM+
Sbjct: 398 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+ +L+D LCK+  + EA+     +    L P++ V    IDG+C+   +E
Sbjct: 458 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELE 517

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR+LF  +  + + PD   Y+ +I+G  +     EA  L   M E G  L+   Y ++ 
Sbjct: 518 AARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTIT 577

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
            G  R      A  L  EM+ RG   D
Sbjct: 578 RGFLRNNETSRAIQLLQEMVARGFSAD 604



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 89/188 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y T+I GLC   + +D+  L  EM       N V    L+D   K    +EA++LL
Sbjct: 429 DTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALL 488

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +  S ++  +    + IDG+C++G +  A D F  +   GL P+V  Y+ +I+GLC++
Sbjct: 489 KAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRR 548

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  LF EM +     +   Y  +  G+L++     A+ L   M   G   D +  
Sbjct: 549 GLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTM 608

Query: 189 TSLVWGLS 196
           T  V  LS
Sbjct: 609 TLFVKMLS 616



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 103/239 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++   C     +++  +   M   G   N +   TL++ Y K     +A+ L  EM 
Sbjct: 363 YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 422

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +    VT+  LI GLC    +++AI  F  M      PN+  Y  L+D LCK   + 
Sbjct: 423 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 482

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   +   ++ PD       IDG  +    + A +L + ++  G+  D+  Y+ ++
Sbjct: 483 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 542

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL R G L EA  LF EM   G   +  +  ++ +          AI+L  EM+ RG 
Sbjct: 543 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 601



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 91/209 (43%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           +TV    L+ +  K    S  LSL  +M    I   + T  +LI+  C    V  A    
Sbjct: 60  STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVL 119

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            ++   G  P+ A +T LI G+C +  I  A +LFD+M      PD   Y  LI+G  K 
Sbjct: 120 AKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 179

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
            +   A+ L   M +     ++ AY +++  L +   + EA  LF EM+ +GI PD    
Sbjct: 180 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 239

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            SL+              L NEM+   ++
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIM 268



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 85/188 (45%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+S  + ML  +   + V F  L+  + K       +    +M  FG+ PN+     LI+
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             C  N +  A ++  ++ K    PDT  +T LI G        EAL+L ++M   G   
Sbjct: 105 SFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRP 164

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y +L+ GL + G+   A  L   M+ +   P+     +++    +   + EA  L 
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 244 NEMMGRGL 251
           +EM+ +G+
Sbjct: 225 SEMVTKGI 232



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 43/95 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K ++ D+  Y  +I GLC     +++  L  EM ENG T N  I  T+   + +  E
Sbjct: 526 LSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNE 585

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
            S A+ LL EM+         T  + +  L   GL
Sbjct: 586 TSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 620



 Score = 37.0 bits (84), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/123 (21%), Positives = 53/123 (43%)

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N I+ A + F+ M +    P T  +  L+    K +     L+L ++M   G+  ++   
Sbjct: 40  NTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTL 99

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+        +  A  +  +++  G  PD     +L++     G + EA+ L ++M+G
Sbjct: 100 HILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIG 159

Query: 249 RGL 251
            G 
Sbjct: 160 EGF 162


>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 418

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 110/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G  P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVV 417



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 124/238 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ G       ++   L + M+ +G+  +    + L++   K  +  +A  L DEML
Sbjct: 174 FNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 233

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+ +    VTF  LIDG CK+G V  A++ + +M    L P++  Y  LI GLCKK  ++
Sbjct: 234 DNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 293

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A++L DEM  + + PD   YT LIDG  K    + A   + RM +  + LD  AYT+L+
Sbjct: 294 QAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALI 353

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL + G   +A  +  EM+  G+ P+      ++ +  ++G++    +L  EM   G
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMI 338



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 119/244 (48%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A L  +  ++     E +   ++ +   + + GL  + V   TLM+ Y K G   E   L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRL 193

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            + M  S ++  V T+ VLI+GLCK   + +A + F  M D GL PN   +T LIDG CK
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              ++ A  ++ +M  + + PD   Y  LI G  K    K+A +L + M+  G+  D   
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKIT 313

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+L+ G  + GHL+ A      MI   I  D++   +L+    + G   +A ++  EM+
Sbjct: 314 YTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 248 GRGL 251
             GL
Sbjct: 374 SVGL 377



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 103/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             +  E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 LGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 91/185 (49%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
             +E L+     ++  F +L+    K G +R A   F  +  +GL P+V  +  L++G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   ++    L + M    + PD   Y+ LI+G  K     +A  L + M + G+  +  
Sbjct: 183 KLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302

Query: 247 MGRGL 251
             +GL
Sbjct: 303 SMKGL 307



 Score = 44.3 bits (103), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 84/194 (43%), Gaps = 1/194 (0%)

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G  S   + + E   ++I   +  F  LI    +SG +R+AI+ +    +          
Sbjct: 46  GSASAVFAAILETKGTQIS-DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTC 104

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             +++ L K    +     ++E  +         +  L+  ++K    + A ++ + +T+
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G+   + ++ +L+ G  + G+L E   L + M   G+ PD      L+    +   MD+
Sbjct: 165 WGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDD 224

Query: 239 AIELQNEMMGRGLL 252
           A EL +EM+  GL+
Sbjct: 225 ANELFDEMLDNGLV 238



 Score = 37.0 bits (84), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI+ D   Y  +I GLC E +  D++ +L EM   GL       T +++ + K G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 61  PSEALSLLDEMLDSRIEVTVVT 82
                 LL EM       +VVT
Sbjct: 397 VWTGSKLLKEMQRDGYAPSVVT 418


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 123/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + ++  Y T+I GLC   K  ++  + S+M+ NG + N      L+D + KAG+
Sbjct: 345 MAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGD 404

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + ++M+ +     VV +  +++ LC+S +  +A     +M      PN   +  
Sbjct: 405 LVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNT 464

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I GLC    +E A NLF +M +    P+   Y  ++DG LK    KEAL L   M E G
Sbjct: 465 FIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKG 524

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++L+L  Y ++  G    G  +EA  L  +M+  G+ PD I   +L   +  +G +  AI
Sbjct: 525 MELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAI 584

Query: 241 ELQNEMMGRG 250
           +L +++   G
Sbjct: 585 QLLDKLSAGG 594



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y T+I  L      E +  + ++M   G + N    T+LM  YF  G 
Sbjct: 275 MVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGR 334

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL++ + M +   E  VV +  LI GLC  G + EA+    +M   G  PNV+ Y A
Sbjct: 335 VLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGA 394

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +  A  ++++M     IP+   YT++++   +   F +A +L  +M+   
Sbjct: 395 LIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDN 454

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + + + GL   G ++ A  LF +M   G  P+      +L    +   + EA+
Sbjct: 455 CPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEAL 514

Query: 241 ELQNEMMGRGL 251
           EL  EM  +G+
Sbjct: 515 ELVTEMEEKGM 525



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 5/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    + ++  Y  ++  LC  ++ + +  LL EM   G   + V  TT++ +  K G+
Sbjct: 175 MKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGK 234

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA       L  R +  V  +  LI+G C+   V+E     G+M + G+ PNV  Y+ 
Sbjct: 235 VEEA-----RELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYST 289

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L     +E A  ++ +M  R   P+   +T+L+ GY       EALN+ NRM E G
Sbjct: 290 VISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEG 349

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + ++ AY +L+ GL   G + EA  +  +M   G  P+     +L+    + G++  A 
Sbjct: 350 FEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGAS 409

Query: 241 ELQNEMMGRGLL 252
           E+ N+MM  G +
Sbjct: 410 EIWNKMMTNGCI 421



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 114/245 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + ++ +Y  +I G C E K ++  LLL +M E G+  N +  +T++ +    G    AL
Sbjct: 245 FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL 304

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           ++  +M        V TF  L+ G    G V EA++ + RM + G  PNV  Y  LI GL
Sbjct: 305 AVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGL 364

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    +  A ++  +M +    P+ + Y ALIDG+ K      A  + N+M   G   ++
Sbjct: 365 CSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNV 424

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YTS+V  L R     +A  L  +M      P+ +   + +K     G ++ AI L  +
Sbjct: 425 VVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQ 484

Query: 246 MMGRG 250
           M   G
Sbjct: 485 MEQYG 489



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 120/252 (47%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      ++  YG +I G         +  + ++M  NG   N V+ T++++   ++  
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSM 439

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A SL+++M         VTF   I GLC SG V  AI+ F +M  +G  PN+  Y  
Sbjct: 440 FSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNE 499

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DGL K+N I+ A  L  EM ++ M  +   Y  +  G+     F+EAL L  +M   G
Sbjct: 500 VLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGG 559

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG-ILPDEILCISLLKKHYERGNMDEA 239
           V  D   Y +L +     G ++ A  L  ++   G  +P+     SLL     +  ++EA
Sbjct: 560 VKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEA 619

Query: 240 IELQNEMMGRGL 251
           +   ++M+  G+
Sbjct: 620 VLYLDKMLNEGI 631



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 30/269 (11%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  L  E   +  + LL +MK  G++ +  +   +++ Y + G   +AL +   + 
Sbjct: 82  YQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIR 141

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   + TV  +  L+D +      +     +  M   G  PNV  Y  L+  LCK N ++
Sbjct: 142 EFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVD 201

Query: 133 RARNLFDEMPKRDMIPDTTAYT------------------------------ALIDGYLK 162
            A  L  EM  +   PD  +YT                              ALI+G+ +
Sbjct: 202 GACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCR 261

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               KE   L  +M E G+D ++  Y++++  LS  G+++ A  ++ +M  RG  P+   
Sbjct: 262 EYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYT 321

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             SL+K ++ RG + EA+ + N M   G 
Sbjct: 322 FTSLMKGYFMRGRVLEALNIWNRMAEEGF 350



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 2/209 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N   +   + T I GLC   + E +  L  +M++ G + N      ++D   K   
Sbjct: 450 MSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENR 509

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L+ EM +  +E+ +VT+  +  G C  G   EA+   G+M   G+ P+   Y  
Sbjct: 510 IKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNT 569

Query: 121 LIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L    C +  ++ A  L D++      +P+  AYT+L+ G       +EA+   ++M   
Sbjct: 570 LTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNE 629

Query: 180 GVDLDLNAYTSLVWGL-SRCGHLQEARVL 207
           G+ L+   + +LV GL +  GHL    +L
Sbjct: 630 GICLNAATWNALVRGLFNSLGHLGPIHIL 658


>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
 gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
 gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 118/248 (47%), Gaps = 1/248 (0%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G     D+  Y ++I G C   K  ++  LL +M   G+    V    L+D Y KAGE  
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A  +  +M+       VVTF  LIDG C+ G V +    +  M   G+ PN   Y+ LI
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LC +N + +AR L  ++  +D+IP    Y  +IDG+ K     EA  +   M +    
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   +T L+ G    G + EA  +FH+M+  G  PD+I   SLL    + G   EA  L
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509

Query: 243 QNEMMGRG 250
            N++  +G
Sbjct: 510 -NQIARKG 516



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 3/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  +  L G ++     + K   +  LL +  E  +    ++  +L++   K   
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDR 186

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L DE L  +      TF +LI GLC  G   +A++  G M  FG  P++  Y  
Sbjct: 187 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI G CK N + +A  +F ++    +  PD   YT++I GY K    +EA +L + M  +
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+      +  LV G ++ G +  A  +  +MI  G  PD +   SL+  +   G + + 
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366

Query: 240 IELQNEMMGRGLLSGS 255
             L  EM  RG+   +
Sbjct: 367 FRLWEEMNARGMFPNA 382



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 1/229 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + ED+  L  E        +T     L+      G+  +AL LL  M     E  +VT+ 
Sbjct: 186 RVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYN 245

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGL-HPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            LI G CKS  + +A + F  +    +  P+V  YT++I G CK   +  A +L D+M +
Sbjct: 246 TLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
             + P    +  L+DGY K      A  ++ +M   G   D+  +TSL+ G  R G + +
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              L+ EM  RG+ P+      L+        + +A EL  ++  + ++
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 34/210 (16%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN--------------------- 114
           I  +  T+ +L   LCK+GL   A   F  M   G+ PN                     
Sbjct: 99  IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158

Query: 115 ------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
                         V  +L++ L K + +E A  LFDE  +     DT  +  LI G   
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-IGRGILPDEI 221
               ++AL L   M+  G + D+  Y +L+ G  +   L +A  +F ++  G    PD +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              S++  + + G M EA  L ++M+  G+
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGI 308


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 127/246 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N   ++ +Y T++ GLC +    ++  L  EM   G+  N V  T L+      G 
Sbjct: 207 MEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGR 266

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SLLDEM+   +   + +  +L+D LCK G + +A    G M   G  P+V  Y +
Sbjct: 267 WKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNS 326

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  C +N ++ A  +F+ M  R  +PD  AYT+LI G+ K ++  +A++L + M +VG
Sbjct: 327 LIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVG 386

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  +T+L+ G  + G    A+ LF  M   G +P+   C  +L    +   + EA+
Sbjct: 387 FTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEAL 446

Query: 241 ELQNEM 246
            L + M
Sbjct: 447 SLFHAM 452



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 123/247 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK D  +   +I  LC          +L  M + GL  + V  T L++     G+   A+
Sbjct: 107 IKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAV 166

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+D +  +     V T+ VLI+GLCK G   EA+ +  +M +   +PNV VY+ ++DGL
Sbjct: 167 ELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGL 226

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +  A  L  EM  + + P+   YT LI G      +KEA +L + M ++GV  DL
Sbjct: 227 CKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDL 286

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            +   LV  L + G + +A+ +   MI  G +PD     SL+ ++  +  MDEA  +   
Sbjct: 287 QSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFEL 346

Query: 246 MMGRGLL 252
           M+ RG L
Sbjct: 347 MVSRGCL 353



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 119/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC++     +  L+  +++ G  ++      L++   K G+ SEA+  L +M 
Sbjct: 149 FTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKME 208

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      VV +  ++DGLCK GLV EA+     M   G+ PN+  YT LI GLC     +
Sbjct: 209 ERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWK 268

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +L DEM K  ++PD  +   L+D   K     +A ++   M  VG   D+  Y SL+
Sbjct: 269 EAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLI 328

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                   + EA  +F  M+ RG LPD +   SL+    +  N+++A+ L +EM+  G 
Sbjct: 329 DRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGF 387



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 105/212 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I   C++++ +++  +   M   G   + V  T+L+  + K    ++A+ LL
Sbjct: 320 DVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLL 379

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM+       VVT+  LI G C+ G    A + F  M  +G  PN+     ++DGLCK 
Sbjct: 380 DEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKS 439

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A +LF  M K ++  +   Y+ ++DG         AL L + +   G+ +++ AY
Sbjct: 440 QLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAY 499

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           T ++ G ++ G L +A  L   M   G +PD 
Sbjct: 500 TIMINGFAKQGLLDKAEDLLSNMEENGCMPDS 531



 Score = 94.4 bits (233), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 87/176 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + T+I G C   +   +K L   M + G   N   C  ++D   K+   SEALSL 
Sbjct: 390 DVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLF 449

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M  S +++ +V + +++DG+C +G +  A++ F  +P  GL  NV  YT +I+G  K+
Sbjct: 450 HAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQ 509

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             +++A +L   M +   +PD+  Y   + G +       ++     M + G  +D
Sbjct: 510 GLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVD 565



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 35/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANT--------VIC---- 48
           M GK IK +L  Y  +I GLC   +++++  LL EM + G+  +         V+C    
Sbjct: 242 MSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGK 301

Query: 49  -----------------------TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                                   +L+D Y    +  EA  + + M+       +V +  
Sbjct: 302 IMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTS 361

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G CK   + +A+     M   G  P+V  +T LI G C+      A+ LF  M K  
Sbjct: 362 LIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYG 421

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            +P+      ++DG  K +   EAL+L + M +  +DL++  Y+ ++ G+   G L  A 
Sbjct: 422 QVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTAL 481

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            LF  +  +G+  +      ++    ++G +D+A +L + M   G +  S
Sbjct: 482 ELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDS 531



 Score = 57.4 bits (137), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 1/190 (0%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYTAL 121
           EAL+    M       +V+ F +L+  + K      AI     M    G+ P+  +   +
Sbjct: 58  EALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVV 117

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+ LC    +    ++   M K  + P    +T LI+G         A+ L + + + G 
Sbjct: 118 INSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGY 177

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D+  Y  L+ GL + G   EA     +M  R   P+ ++  +++    + G + EA+ 
Sbjct: 178 RSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALG 237

Query: 242 LQNEMMGRGL 251
           L  EM G+G+
Sbjct: 238 LCLEMSGKGI 247


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 126/244 (51%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
             + K D+  Y  +I  LC E K E +  LL E  + GL    +    L+ AY K+ E  
Sbjct: 338 ANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYD 397

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A  LL ++ +   +  +VT+ +LI GL  SG + +A++   ++ D G+ P+ A+Y  L+
Sbjct: 398 IASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GLCK      A+ LF EM  R ++PD   Y  LIDG+++   F EA  +     E GV 
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVK 517

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           +D+  + +++ G  R G L EA    + M    ++PD+    +++  + ++ +M  AI++
Sbjct: 518 VDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI 577

Query: 243 QNEM 246
             +M
Sbjct: 578 FRDM 581



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 6/242 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG- 59
           +K K     L  +GT+I G C +  F  S  LL E+KE GL         ++DA ++ G 
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGF 325

Query: 60  --EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
             +P+E++  +   + +  +  + T+ +LI+ LCK G    A          GL      
Sbjct: 326 KVDPAESIRWI---VANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLS 382

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y  LI   CK    + A  L  ++ +R   PD   Y  LI G +      +A+N+K ++ 
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           + GV  D   Y  L+ GL + G    A++LF EM+ R ILPD  +  +L+      G+ D
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFD 502

Query: 238 EA 239
           EA
Sbjct: 503 EA 504



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 1/245 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +  K D+  YG +I GL +    +D+  +  ++ + G++ +  I   LM    K G    
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L  EMLD  I      +  LIDG  +SG   EA   F    + G+  +V  + A+I 
Sbjct: 469 AKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIK 528

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C+   ++ A    + M +  ++PD   Y+ +IDGY+K +    A+ +   M +     
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKP 588

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY-ERGNMDEAIEL 242
           ++  YTSL+ G    G    A   F EM  R ++P+ +   +L++    E   +++A+  
Sbjct: 589 NVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYY 648

Query: 243 QNEMM 247
              MM
Sbjct: 649 WELMM 653



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 108/240 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C   +++ +  LL ++ E G   + V    L+     +G   +A+++  +++
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +      + +L+ GLCK+G    A   F  M D  + P+  VY  LIDG  +    +
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFD 502

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR +F    ++ +  D   + A+I G+ +     EAL   NRM E  +  D   Y++++
Sbjct: 503 EARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   +  A  +F +M      P+ +   SL+     +G+   A E   EM  R L+
Sbjct: 563 DGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLV 622



 Score = 62.0 bits (149), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 17/239 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    K ++  Y ++I G C +  F  ++    EM+   L  N V  TTL+ ++ K   
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESS 640

Query: 61  PSE-ALSLLDEMLDSRIEVTVVTFCVLIDGLCKS--------------GLVREAIDYFGR 105
             E A+   + M+ ++     VTF  L+ G  K               G      ++F R
Sbjct: 641 TLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHR 700

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M   G   + A Y +++  LC    ++ A  L D M K+   PD  ++ A++ G+    +
Sbjct: 701 MKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGN 760

Query: 166 FKEALNLKNR-MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
            K+  N+  R + E G+++ +     L   L +   + EA  + H M+ +    +  +C
Sbjct: 761 SKQWRNMDFRNLDEKGLEVAVRYSRVLEQHLPK-AVICEASTILHAMVEKADTKEPEIC 818



 Score = 56.6 bits (135), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/262 (20%), Positives = 99/262 (37%), Gaps = 35/262 (13%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + ED++ +  EM E G   +      ++      G+  E   L+++         +V + 
Sbjct: 185 RLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYN 244

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            +I G CK G +  A   F  +   G  P +  +  +I+G CKK     +  L +E+ +R
Sbjct: 245 TIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKER 304

Query: 145 -----------------------------------DMIPDTTAYTALIDGYLKHESFKEA 169
                                              D  PD   Y  LI+   K    + A
Sbjct: 305 GLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVA 364

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L +  ++ G+ L   +Y  L+    +      A  L  ++  RG  PD +    L+  
Sbjct: 365 AGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHG 424

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
               G+MD+A+ ++ +++ RG+
Sbjct: 425 LVVSGHMDDAVNMKVKLIDRGV 446



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/220 (19%), Positives = 100/220 (45%), Gaps = 1/220 (0%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           LS  K++   +N   C++ +    +    +E   +L  + +  +++T      ++    +
Sbjct: 87  LSSEKKDEFFSNGFACSSFLKLLARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAE 146

Query: 93  SGLVREAIDYFGRMPD-FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           SG + +A++ +  + + +   P+V    AL+  + K   +E AR ++DEM +R    D  
Sbjct: 147 SGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNY 206

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +   ++ G       +E   L       G   ++  Y +++ G  + G ++ A+++F E+
Sbjct: 207 STCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKEL 266

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +G +P      +++    ++G+   +  L  E+  RGL
Sbjct: 267 KLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGL 306


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 106/216 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+  Y  +I G C E K ++++ +L EM++ G   +  +   L+  Y   G   +AL
Sbjct: 285 IPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKAL 344

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L DEM+   ++   V    ++ GL + G+  E  + F      G+  + A Y  ++D L
Sbjct: 345 ALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDAL 404

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +E A  L  EM  + M+PD   YT +I GY       +ALN+   M ++G   D+
Sbjct: 405 CKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDI 464

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
             Y  L  G SR G  QEA  L + M  +G+ PD +
Sbjct: 465 VTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTV 500



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 15/222 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  LC E   E +  LL  M    +    ++ + ++ A F+AGE  +A  + + ++
Sbjct: 568 FFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLV 627

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI---------- 122
           D  +   V+T+ ++I+G C+   ++EA    G M + G+ P+V  YT L+          
Sbjct: 628 DRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRS 687

Query: 123 -----DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
                D +  K  +     L+ EM   D+ PD   YT LID + K  + ++A+NL N M 
Sbjct: 688 SSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMI 747

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           + G+  D   YT+L+ G    G++++A VLF EM+ +GI PD
Sbjct: 748 DRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPD 789



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 137/297 (46%), Gaps = 46/297 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDA------ 54
           M+ + +K D   +  II GLCI  K +D++     ++E  L   + +     +A      
Sbjct: 490 METQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKA 549

Query: 55  ------------------YFK-------AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG 89
                             +FK        G+  +AL LL+ M+   I  T++ +  +I  
Sbjct: 550 FALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGA 609

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L ++G + +A   F  + D GL P+V  YT +I+G C+ N ++ A ++  +M  R + PD
Sbjct: 610 LFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPD 669

Query: 150 TTAYTAL---------------IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
              YT L               +D     E+  +   L + M ++ +  D+  YT L+  
Sbjct: 670 VITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDK 729

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +  ++Q+A  LF+EMI RG+ PD +   +LL  +   GN+ +A+ L +EM+ +G+
Sbjct: 730 HCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGI 786



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 4/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKGK +  D+  Y T+I G  ++ K  D+  +  EMK+ G   + V    L   + + G 
Sbjct: 420 MKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGL 479

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EALSLL+ M    ++   VT  ++I+GLC  G V +A  +F  + +  L      Y+A
Sbjct: 480 TQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLEN----YSA 535

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G C+ N + +A  L   + K+  I    ++  L+         ++AL L   M  + 
Sbjct: 536 MVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALN 595

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++  +  Y+ ++  L + G +++A+ +F+ ++ RG+ PD I    ++  +     M EA 
Sbjct: 596 INPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAW 655

Query: 241 ELQNEMMGRGL 251
            +  +M  RG+
Sbjct: 656 HVLGDMKNRGI 666



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 124/251 (49%), Gaps = 4/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            K   I  D   Y  ++  LC   K E++  LL EMK   +  + +  TT++  YF  G+
Sbjct: 385 FKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGK 444

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL++  EM D   +  +VT+ VL  G  ++GL +EA+     M   G+ P+   +  
Sbjct: 445 VVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNM 504

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLC    ++ A+  FD + ++ +      Y+A+++GY +     +A  L  R+++ G
Sbjct: 505 IIEGLCIGGKVDDAQAFFDNLEEKCL----ENYSAMVNGYCEANHVNKAFALLIRLSKQG 560

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             L   ++  L+  L   G  ++A  L   M+   I P  I+   ++   ++ G M++A 
Sbjct: 561 RILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQ 620

Query: 241 ELQNEMMGRGL 251
            + N ++ RGL
Sbjct: 621 YVFNMLVDRGL 631



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 114/238 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y   I G C +    ++  +  +M+E+G+T N+   TT ++     G       +L +++
Sbjct: 222 YTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVI 281

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +++I + V  + V+I G C    ++EA      M   G  P+V VY ALI G C    + 
Sbjct: 282 NAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLL 341

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L DEM  + +  +    ++++ G  +     E  N      ++G+  D   Y  ++
Sbjct: 342 KALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVM 401

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             L + G ++EA  L  EM G+ ++PD I   +++  ++ +G + +A+ +  EM   G
Sbjct: 402 DALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIG 459



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 1/232 (0%)

Query: 22  IESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           +ES+  D  + +  ++K  GL  N    T  +  + + G  +EA+ +  +M +S +    
Sbjct: 195 VESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNS 254

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
            ++   I+GLC  G           + +  +  +V  YT +I G C +  ++ A ++  E
Sbjct: 255 FSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILRE 314

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M K+   PD   Y ALI GY    +  +AL L + M   GV  +    +S++ GLS+ G 
Sbjct: 315 MEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGM 374

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             E    F E    GI  DE     ++    + G ++EA+EL  EM G+ ++
Sbjct: 375 ASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMV 426



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 94/208 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    D+ +Y  +I G C+      +  L  EM   G+  N VI ++++    + G 
Sbjct: 315 MEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGM 374

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SE  +   E     I      + V++D LCK G V EA++    M    + P++  YT 
Sbjct: 375 ASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTT 434

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G   K  +  A N++ EM      PD   Y  L  G+ ++   +EAL+L N M   G
Sbjct: 435 VISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQG 494

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  D   +  ++ GL   G + +A+  F
Sbjct: 495 VKPDTVTHNMIIEGLCIGGKVDDAQAFF 522



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 86/166 (51%)

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           L++ L +S  V  AI  + ++  FGL+PN   YT  I G C+K  +  A ++F +M +  
Sbjct: 190 LMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESG 249

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P++ +YT  I+G   H        +   +    + +D+ AYT ++ G      L+EA 
Sbjct: 250 VTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAE 309

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +  EM  +G  PD  +  +L+  +   GN+ +A+ L +EM+ +G+
Sbjct: 310 SILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGV 355



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 15/168 (8%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTL------------ 51
           + +  D+  Y  +I G C  +K +++  +L +MK  G+  + +  T L            
Sbjct: 629 RGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSS 688

Query: 52  ---MDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
              +DA        +  +L  EM D  I+  V+ + VLID  CK+  +++AI+ F  M D
Sbjct: 689 SSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMID 748

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
            GL P+   YTAL+ G C    I++A  LFDEM  + + PD    + L
Sbjct: 749 RGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 7/110 (6%)

Query: 28  DSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLI 87
           D   L SEMK+  +  + +  T L+D + K     +A++L +EM+D  +    VT+  L+
Sbjct: 703 DPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALL 762

Query: 88  DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNL 137
            G C  G +++A+  F  M + G+ P+    + L       +CI + R +
Sbjct: 763 SGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL-------HCILKVRKV 805



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 43/86 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  +IK D+  Y  +I   C  +  +D+  L +EM + GL  +TV  T L+  Y   G 
Sbjct: 711 MKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGN 770

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVL 86
             +A+ L DEML+  I     T  VL
Sbjct: 771 IKKAVVLFDEMLNKGIRPDAHTMSVL 796


>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
 gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 121/240 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC E K  +   +  +M + G   N  I T L+D+  K G   EA+ L + M 
Sbjct: 275 YSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMK 334

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +E  VVT+ V+++ +CKSG + EA++Y       G+  N  +Y++LIDGL K   + 
Sbjct: 335 KEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGRVH 394

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM K+   PD+  Y ALID   K     EAL    RM + G D  +  YT ++
Sbjct: 395 EAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTIMI 454

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL R    +EA  ++  MI +GI P      +L       G +  A +L +E+   G++
Sbjct: 455 NGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMGVI 514



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 116/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  D+  Y T+I G C   K + +     +M+   +  + +   TL+ A +  G+
Sbjct: 193 MENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGD 252

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               LSL  EM ++ +E+    + ++I GLCK G   E    F +M   G   NVA+YTA
Sbjct: 253 FDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTA 312

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K   +  A  LF+ M K  + PD   Y  +++   K     EA+         G
Sbjct: 313 LIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNG 372

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V ++   Y+SL+ GL + G + EA  LF EM+ +G  PD     +L+    + G  DEA+
Sbjct: 373 VAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEAL 432

Query: 241 ELQNEMMGRG 250
                M   G
Sbjct: 433 AFFKRMEDEG 442



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 122/251 (48%), Gaps = 3/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + ++ D+  YG ++  +C   + +++   L   + NG+  N ++ ++L+D   KAG 
Sbjct: 333 MKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAMLYSSLIDGLGKAGR 392

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L +EM+          +  LID L K G   EA+ +F RM D G    V  YT 
Sbjct: 393 VHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYTI 452

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GL +++  E A  ++D M  + + P   A+ AL  G         A  L + +  +G
Sbjct: 453 MINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDELAPMG 512

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI-LPDEILCISLLKKHYERGNMDEA 239
           V +   A+  ++  L + G ++EA  L    + RG  +P  +  + L+    + GN D A
Sbjct: 513 V-IPETAFEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRTV-LINALRKAGNADLA 570

Query: 240 IELQNEMMGRG 250
           ++L +  +G G
Sbjct: 571 LKLMHSKIGIG 581



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 115/250 (46%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K K    +L  Y + I  L I    ++ K +  + +  G   N     +L+ ++   G  
Sbjct: 89  KQKKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMV 148

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            E L +   M ++ +E ++ T+  L++GL  S  +  A      M +  + P+V  Y  +
Sbjct: 149 EELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTM 208

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I G C+    ++A   F +M  R++ PD   Y  LI        F   L+L + M E G+
Sbjct: 209 IKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGL 268

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           ++  +AY+ ++ GL + G   E   +F +MI +G   +  +  +L+  + + GNM EA+ 
Sbjct: 269 EIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAML 328

Query: 242 LQNEMMGRGL 251
           L   M   GL
Sbjct: 329 LFERMKKEGL 338


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 121/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC          L  EM E G+  N    T L++ + K  +  EA  L D+M+
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           DS +    VTF V+I+G C  G +R+A   + +M + GL P+   Y +LI GLC  + + 
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A     ++     + +  + TAL+ G+ +   F E  +L + M   GV LDL ++T +V
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +   +    +++ VLF EM  +G+ PD+I    ++    +  NM +A+   ++M+  G
Sbjct: 626 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG 683



 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +KA    Y  +++GLC   + +++  + + M   G+TA+ V   TL+  + +  E
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +M+      +      +ID L K  LV EA     ++ D G+ PNV  Y A
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK    + A  LF EM  R + P+   Y  LI    K    ++AL L ++M + G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + + +  Y SL+ G  + G L  AR L   M+  G+ P       L+      G++   +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 241 ELQNEMMGRGL 251
           EL  EM  RG+
Sbjct: 464 ELHREMAERGI 474



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ ++ +   Y  +I  LC     ED+  L  +M++ G+        +L++ Y K G 
Sbjct: 364 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 423

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL  M+   +  T  ++  LI GLC++G +   ++    M + G+  N   +TA
Sbjct: 424 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTA 483

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A  LFD+M   ++IP+   +  +I+GY    + ++A  L ++M E+G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y SL+ GL     + +A     ++     + +     +LL   +  G   E  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 603

Query: 241 ELQNEMMGRGL 251
            L +EM  RG+
Sbjct: 604 HLWDEMAVRGV 614



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 115/225 (51%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E++  L  ++ + G+  N      L+D   K     +A  L  EM    +E   VT+ +L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I  LCK G++ +A+  F +M D G+   V  Y +LI+G CK+  ++RAR L   M K  +
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P   +Y+ LI G  ++      + L   M E G+  +   +T+L+ G  +   + EA  
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           LF +MI   ++P+E+    +++ +   GN+ +A +L ++M+  GL
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 107/215 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC   +F+D+  L  EM   GL  N V    L+ A  K G   +AL L D+M 
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I+VTV  +  LI+G CK G +  A      M   GL P  A Y+ LI GLC+   + 
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 460

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L  EM +R +  +   +TALI+G+ K +   EA  L ++M +  V  +   +  ++
Sbjct: 461 SCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 520

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            G    G++++A  L+ +M+  G+ PD     SL+
Sbjct: 521 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 112/242 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + AD   Y T+++G C   + E +  +  +M   G   +   C+ ++D   K     EA 
Sbjct: 264 VTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAF 323

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  ++ D  +   V  +  LID LCK+    +A   F  M   GL PN   Y  LI  L
Sbjct: 324 SLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHAL 383

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  IE A  LFD+M  + +      Y +LI+GY K  S   A  L + M + G+    
Sbjct: 384 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            +Y+ L+ GL R G L     L  EM  RGI  +     +L+    +   MDEA  L ++
Sbjct: 444 ASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 503

Query: 246 MM 247
           M+
Sbjct: 504 MI 505



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 123/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K DL  +  I++    +   E S +L  EMKE G+  + +  T ++DA  K   
Sbjct: 609 MAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEEN 668

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+  D+M+        VT  VLI+ LCKSG +  A      M    + PN   Y  
Sbjct: 669 MIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC 728

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +D    +  +E+A++L   M  +  +    ++  LI G  K    +EA++L +++TE G
Sbjct: 729 FLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESG 787

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D  +Y++++  L + G + +A  L++EM+ +G+ PD +     ++     G  D+A+
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847

Query: 241 ELQNEMMGRGL 251
            +   M+  G+
Sbjct: 848 GIYTNMIRSGV 858



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 123/236 (52%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I++ L    +F  ++ L  +M ++G+  +  + T  + AY ++     A  L+  M    
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++ + V + VL+ GLCK+  V+EA++    M + G+  +   Y  L+ G C+   +E A 
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 288

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            +  +M +   +P     + +ID   K E  +EA +L  ++ ++G+  ++ AY +L+  L
Sbjct: 289 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKL 348

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +     +A  LF EM GRG+ P+E+    L+    +RG +++A+ L ++M  +G+
Sbjct: 349 CKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 1/188 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC       ++LL  EM    +  N       +D +   G+  +A  L   ML
Sbjct: 691 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML 750

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  ++V+F +LI GLCK+G ++EAID   ++ + G  P+   Y+ +I  LCK   I 
Sbjct: 751 QGHL-ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L++EM  + + PD  AY   I     H    +AL +   M   GV  + + Y +L+
Sbjct: 810 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869

Query: 193 WGLSRCGH 200
            G+S   H
Sbjct: 870 SGISLMLH 877



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 9/254 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D  +Y   I   C     + ++ L+  M+  G+ A+ V    LM    K   
Sbjct: 189 MLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMR 248

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + + M++  +    VT+  L+ G C+   +  A+     M   G  P+ A  + 
Sbjct: 249 VQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSF 308

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID L KK  +E A +L  ++    M+P+  AY ALID   K+E F +A  L   M   G
Sbjct: 309 MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRG 368

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y  L+  L + G +++A  LF +M  +GI        SL+  + ++G++D A 
Sbjct: 369 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRA- 427

Query: 241 ELQNEMMGRGLLSG 254
                   RGLLSG
Sbjct: 428 --------RGLLSG 433



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 35/276 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C + K +++  L  +M ++ +  N V    +++ Y   G   +A  L D+M+
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDY----------------------FGRMPDF- 109
           +  ++    T+  LI GLC +  V +A ++                      F R   F 
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 600

Query: 110 ------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                       G+  ++  +T ++    K++  E++  LF EM ++ + PD   YT +I
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D   K E+  +ALN  ++M   G   +   +T L+  L + G+L  A +L  EM+   +L
Sbjct: 661 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           P++      L      G+M++A +L + M+   L S
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS 756



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%)

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L S I V   T   ++  L K      A D F +M   G+H +  VYTA I   C+   +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + AR L   M    +      Y  L+ G  K+   +EA+ +KN M  +GV  D   Y +L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           V+G  R   L+ A  + H+MI  G +P E  C  ++ +  ++  ++EA  L  ++   G+
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 252 L 252
           +
Sbjct: 335 V 335



 Score = 52.0 bits (123), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 61/118 (51%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A +  +  +I GLC   K +++  L+S++ E+G + + +  +T++    K G+ ++A  L
Sbjct: 755 ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFEL 814

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +EML   ++  VV + + I      G   +A+  +  M   G+ PN   Y AL+ G+
Sbjct: 815 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 67/148 (45%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+  N    + ++  L K      AR+LFD+M +  +  D   YTA I  Y +  +   A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L  RM   GV      Y  L++GL +   +QEA  + + M+  G+  DE+   +L+  
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGSKN 257
                 ++ A+ + ++M+  G +    N
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEAN 305


>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 641

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 125/248 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +L  + ++++G C E K  ++K +L ++KE G   + V+   L+  Y +AG+  +A  LL
Sbjct: 245 NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLL 304

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM          +F +LI   CK+  + EA+  F  M   G   +V  YT LI G CK 
Sbjct: 305 AEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKW 364

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              ++A  + D+M ++   P   +Y  ++  + K E  +E + L   M ++G   DLN Y
Sbjct: 365 GNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIY 424

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  + + G L+EA  L+ EM   G+ P     I ++     +G + EA +   EM+ 
Sbjct: 425 NTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVE 484

Query: 249 RGLLSGSK 256
           RGLLS  +
Sbjct: 485 RGLLSAPQ 492



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 2/240 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           +Y  +I  L    +F     L+ EM KEN       +   LM  +       +A+ +LDE
Sbjct: 143 VYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDE 202

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M     E     F  L+D LCK+G V+EA   F  M     +PN+  +T+L+ G C++  
Sbjct: 203 MPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RVRFNPNLRHFTSLLYGWCREGK 261

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           I  A+++  ++ +    PD   Y  L+ GY +    ++A +L   M +V    +  ++T 
Sbjct: 262 IMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTI 321

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+    +   + EA  +F EM G G   D +   +L+    + GN D+A E+ ++M+ +G
Sbjct: 322 LIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKG 381



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 99/217 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K    + D+ +Y  ++ G     K  D+  LL+EMK+     N    T L+ ++ K  +
Sbjct: 272 IKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEK 331

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM  S  E  VVT+  LI G CK G   +A +    M   G  P+   Y  
Sbjct: 332 MDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLC 391

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    KK  +E    L +EM K   +PD   Y  +I    K    KEA+ L   M   G
Sbjct: 392 IMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGG 451

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           ++  L+ Y  +V G    G L EA   F EM+ RG+L
Sbjct: 452 LNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLL 488



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 1/246 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  ++G ++  LC     +++  L  +M+      N    T+L+  + + G+  EA  +L
Sbjct: 211 DEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGWCREGKIMEAKHVL 269

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            ++ ++  E  +V +  L+ G  ++G +R+A D    M      PN A +T LI   CK 
Sbjct: 270 VQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKT 329

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  +F EM       D   YT LI G+ K  +  +A  + + M + G D    +Y
Sbjct: 330 EKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSY 389

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             ++    +   L+E   L  EM   G +PD  +  ++++   + G++ EA+ L  EM  
Sbjct: 390 LCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQA 449

Query: 249 RGLLSG 254
            GL  G
Sbjct: 450 GGLNPG 455



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 2/221 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G   +AD+  Y T+I G C     + +  +L +M + G   + +    +M A+ K  E
Sbjct: 342 MQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEE 401

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + L++EM        +  +  +I  +CK G ++EA+  +G M   GL+P +  Y  
Sbjct: 402 LEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYIL 461

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           ++ G   + C+  A + F EM +R ++  P       L +  L+ E  + A N+ + MT 
Sbjct: 462 MVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTT 521

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            G +L+++A+T  +  L   GH++EA     +M+   ++P 
Sbjct: 522 KGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQ 562


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 120/238 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I  LC   K +D+  L ++MK +    + V   TL+D +   G   +   + 
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIW 357

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM        VVTF +L++ LCK+G + EA D    M   G+ PN+  Y  LI GL + 
Sbjct: 358 TEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRA 417

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A +LF  M    + P    Y  LID + K     +AL    +M   G+  ++ A 
Sbjct: 418 NRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVAC 477

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + ++ L+  G L EA+ +F+E+   G+ PD +    ++K + + G +DEAI+L +EM
Sbjct: 478 NASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEM 535



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 122/247 (49%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  ++      ++ L    +  ++K + +E+K +GL  ++V    +M  Y K G+
Sbjct: 465 MKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQ 524

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL EM   + E  V+    LID L K+G V EA   F RM +  L P V  Y  
Sbjct: 525 VDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNI 584

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GL K+  I++A  LF+ M      P+T  +  L+D   K++    AL +  +MT + 
Sbjct: 585 LLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMN 644

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  + +++ G  +   ++ A  LFH+M  + + PD +   +LL    + G +++A 
Sbjct: 645 CRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAF 703

Query: 241 ELQNEMM 247
            +  +  
Sbjct: 704 RITEDFF 710



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 129/281 (45%), Gaps = 35/281 (12%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            +K  L +Y  +I G       E +  L  EMK  G   +T    +L+DA+ K+G+ +E  
Sbjct: 786  VKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELF 845

Query: 66   SLLDEML------------------------DSRIEV-----------TVVTFCVLIDGL 90
             L DEML                        D  +++           T  TF  LIDGL
Sbjct: 846  DLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGL 905

Query: 91   CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
             KSG + +A + F  M  +G  PN A+Y  L++G  K   ++ A   F  M K  + PD 
Sbjct: 906  LKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDL 965

Query: 151  TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             +YT L+D         +AL+   ++ + G+D DL AY  ++ GL R    +EA  LFHE
Sbjct: 966  KSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHE 1025

Query: 211  MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            M  RGI+PD     SL+      G ++EA ++  E+   GL
Sbjct: 1026 MQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGL 1066



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 121/255 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ ++  Y   I  L  + K +++  ++  M ++G   + V  T L+DA   A +
Sbjct: 255 MESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARK 314

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L  +M  S  +   VT+  L+D     G + +    +  M   G  P+V  +T 
Sbjct: 315 LDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTI 374

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++ LCK   I  A +L D M K+ ++P+   Y  LI G L+     +AL+L + M  +G
Sbjct: 375 LVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLG 434

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+     Y  L+    + GH  +A   F +M  RGI P+ + C + L    E G + EA 
Sbjct: 435 VEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAK 494

Query: 241 ELQNEMMGRGLLSGS 255
            + NE+   GL   S
Sbjct: 495 AMFNELKSSGLAPDS 509



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 118/250 (47%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  +  K +   Y  +I  L   ++ + +  L   +     +        L+D   K+G 
Sbjct: 851  MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              +A  + D M+          + +L++G  K G V  A ++F RM   G+ P++  YT 
Sbjct: 911  LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L+D LC    ++ A + F+++ +  + PD  AY  +I+G  + +  +EAL+L + M   G
Sbjct: 971  LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +  DL  Y SL+  L   G ++EA  ++ E+   G+ P+     +L++ +   GN + A 
Sbjct: 1031 IVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAY 1090

Query: 241  ELQNEMMGRG 250
             +  +MM  G
Sbjct: 1091 GIYKKMMVGG 1100



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 116/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      D+  +  ++  LC   +  ++  LL  M++ G+  N     TL+    +A  
Sbjct: 360 MEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANR 419

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L   M    +E T  T+ +LID   KSG   +A++ F +M   G+ PN+    A
Sbjct: 420 LDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNA 479

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +  L +   +  A+ +F+E+    + PD+  Y  ++  Y K     EA+ L + M++V 
Sbjct: 480 SLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQ 539

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+    SL+  L + G ++EA  +F  M    + P  +    LL    + G + +A+
Sbjct: 540 CEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAV 599

Query: 241 ELQNEMMGRG 250
           +L   M G G
Sbjct: 600 QLFESMNGHG 609



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 112/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  +L  Y T+I GL   ++ +D+  L S M+  G+         L+D + K+G 
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGH 454

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P +AL   ++M    I   +V     +  L + G + EA   F  +   GL P+   Y  
Sbjct: 455 PGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNM 514

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    K   ++ A  L  EM K    PD     +LID   K    +EA  +  RM E+ 
Sbjct: 515 MMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMN 574

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y  L+ GL + G +Q+A  LF  M G G  P+ I   +LL    +   +D A+
Sbjct: 575 LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLAL 634

Query: 241 ELQNEM 246
           ++  +M
Sbjct: 635 KMFYKM 640



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 110/242 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  + K D   Y T++         +  + + +EM+ +G   + V  T L++A  KAG 
Sbjct: 325 MKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGR 384

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  LLD M    +   + T+  LI GL ++  + +A+D F  M   G+ P    Y  
Sbjct: 385 INEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYIL 444

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K     +A   F++M  R + P+  A  A +    +     EA  + N +   G
Sbjct: 445 LIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSG 504

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  ++   S+ G + EA  L  EM      PD I+  SL+   Y+ G ++EA 
Sbjct: 505 LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAW 564

Query: 241 EL 242
           ++
Sbjct: 565 QM 566



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 106/252 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I+ ++  Y  I   L I      +   L +M+E G   N      L+    ++G 
Sbjct: 150 MQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGF 209

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL +   M+   ++ ++ TF  L+    K   ++  +     M   GL PN+  YT 
Sbjct: 210 CKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTI 269

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I  L +   I+ A  +   M      PD   YT LID         +A+ L  +M    
Sbjct: 270 CIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSS 329

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +L+   S CGHL +   ++ EM   G  PD +    L+    + G ++EA 
Sbjct: 330 HKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAF 389

Query: 241 ELQNEMMGRGLL 252
           +L + M  +G+L
Sbjct: 390 DLLDTMRKQGVL 401



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 111/268 (41%), Gaps = 40/268 (14%)

Query: 19  GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
           G C E+  E  + ++SE    GL  +    + LM A  K       + LL+EM    +  
Sbjct: 208 GFCKEA-LEVYRRMVSE----GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRP 262

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
            + T+ + I  L + G + EA     RM D G  P+V  YT LID LC    ++ A  LF
Sbjct: 263 NIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLF 322

Query: 139 DEMPKRDMIPDTTAYTALID-----GYL------------------------------KH 163
            +M      PD   Y  L+D     G+L                              K 
Sbjct: 323 TKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKA 382

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               EA +L + M + GV  +L+ Y +L+ GL R   L +A  LF  M   G+ P     
Sbjct: 383 GRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTY 442

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I L+  H + G+  +A+E   +M  RG+
Sbjct: 443 ILLIDYHGKSGHPGKALETFEKMKARGI 470



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 106/231 (45%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           L +  + ED   +   M+   +  N      +  + F  G   +A S L++M ++   + 
Sbjct: 134 LRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLN 193

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
             ++  LI  L +SG  +EA++ + RM   GL P++  ++AL+    K+  I+    L +
Sbjct: 194 AYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLE 253

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM    + P+   YT  I    +     EA  +  RM + G   D+  YT L+  L    
Sbjct: 254 EMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTAR 313

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            L +A  LF +M      PD++  ++LL K  + G++D+  ++  EM   G
Sbjct: 314 KLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADG 364



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 35/214 (16%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            +G +I GL    + +D+  +   M   G   N+ I   L++ Y K G    A      M+
Sbjct: 898  FGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMV 957

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               I   + ++ +L+D LC +G V +A+ YF ++   GL P++  Y  +I+GL +    E
Sbjct: 958  KEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTE 1017

Query: 133  RARNLFDEMPKRDMIPD-----------------------------------TTAYTALI 157
             A +LF EM  R ++PD                                      Y ALI
Sbjct: 1018 EALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALI 1077

Query: 158  DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             GY    + + A  +  +M   G D +   +  L
Sbjct: 1078 RGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 95/214 (44%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
             +MK  G+  N V C   + +  + G   EA ++ +E+  S +    VT+ +++    K
Sbjct: 462 FEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSK 521

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
            G V EAI     M      P+V V  +LID L K   +E A  +F  M + ++ P    
Sbjct: 522 VGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVT 581

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y  L+ G  K    ++A+ L   M   G   +   + +L+  L +   +  A  +F++M 
Sbjct: 582 YNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMT 641

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
                PD +   +++    ++  +  AI L ++M
Sbjct: 642 TMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 72/156 (46%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  + I+ DL  Y  ++  LCI  + +D+     ++K+ GL  + V    +++   ++  
Sbjct: 956  MVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQR 1015

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EALSL  EM +  I   + T+  LI  L   G++ EA   +  +   GL PNV  Y A
Sbjct: 1016 TEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNA 1075

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
            LI G       E A  ++ +M      P+T  +  L
Sbjct: 1076 LIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 121/249 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+  + T+I   C E   E++  LL E     L  N +  T L+  +   GE
Sbjct: 407 MVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGE 466

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM+       VVT   LI GL  SG V EA+    +M +  + P+  +Y  
Sbjct: 467 VMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNV 526

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCKK  +  A+NL  EM ++ + PD   YT LIDG+++ +   +A  +   M E G
Sbjct: 527 LISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKG 586

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ AY +++ G  + G + EA +    M   G +PDE    +L+  + ++G++  A+
Sbjct: 587 GYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAAL 646

Query: 241 ELQNEMMGR 249
               +MM R
Sbjct: 647 RFLCDMMKR 655



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 121/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I   +  YG II  L  +S     + LL EMKE GL+ N  I  T++ A  K   
Sbjct: 337 MEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRS 396

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+AL++L++M+ SR +  VVTF  LI   C+ G V EA+          L PN   YT 
Sbjct: 397 ASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTP 456

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C +  +  A +L  EM  R   PD     ALI G +      EAL ++ +M E  
Sbjct: 457 LIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQ 516

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D N Y  L+ GL +   L  A+ L  EM+ + + PD+ +  +L+        + +A 
Sbjct: 517 VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDAR 576

Query: 241 ELQNEMMGRG 250
           ++   M  +G
Sbjct: 577 KIFEFMEEKG 586



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 115/240 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C+  +   +  LL EM   G T + V    L+     +G+  EAL + ++M 
Sbjct: 454 YTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMA 513

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + ++      + VLI GLCK  ++  A +    M +  + P+  VYT LIDG  + + + 
Sbjct: 514 ERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLS 573

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR +F+ M ++    D  AY A+I GY K     EA+   + M +VG   D   YT+L+
Sbjct: 574 DARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLI 633

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G ++ G ++ A     +M+ R   P+ +   SL+  +   GN D A  L   M   GL 
Sbjct: 634 DGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLF 693



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 109/238 (45%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            ++ GLC+E + E+ + L+      G     V    L+D Y + G+    L LL EM   
Sbjct: 281 VMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMK 340

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            I  TVVT+  +I  L +   + +       M + GL PNV +Y  +I  LCK     +A
Sbjct: 341 GIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQA 400

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             + ++M      PD   +  LI  + +    +EAL L        ++ +  +YT L+ G
Sbjct: 401 LAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHG 460

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               G +  A  L  EMIGRG  PD +   +L+      G +DEA+ ++ +M  R ++
Sbjct: 461 FCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVM 518



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 4/233 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+    D+   G +I GL +  + +++ ++  +M E  +  +  I   L+    K   
Sbjct: 477 MIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRM 536

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A +LL EML+ +++     +  LIDG  +S  + +A   F  M + G + ++  Y A
Sbjct: 537 LSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNA 596

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G CK   +  A      M K   IPD   YT LIDGY K    K AL     M +  
Sbjct: 597 MIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRR 656

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKK 229
              ++  Y SL+ G    G+   A VLF  M   G+ P+     +L  SL KK
Sbjct: 657 CKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKK 709



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 15/242 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    D+  Y  +I G C      ++ + +S M++ G   +    TTL+D Y K G+
Sbjct: 582 MEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGD 641

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL  L +M+  R +  +VT+  LI G C  G    A   F  M   GL PNV  YT 
Sbjct: 642 IKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTV 701

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK-------------HESFK 167
           LI  L KK+   +A   F+ M      P+      L++G                 ++ K
Sbjct: 702 LIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHK 761

Query: 168 EA--LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
           ++  L++   +   G+D  ++AY ++++ L R   L +A  L  +M  +G LPD +  +S
Sbjct: 762 KSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLS 821

Query: 226 LL 227
           LL
Sbjct: 822 LL 823



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 102/220 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D  +Y  +I GLC +     +K LL EM E  +  +  + TTL+D + ++ +
Sbjct: 512 MAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDK 571

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  + + M +      +V +  +I G CKSG++ EA+     M   G  P+   YT 
Sbjct: 572 LSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTT 631

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  KK  I+ A     +M KR   P+   Y +LI GY    +   A  L   M   G
Sbjct: 632 LIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEG 691

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  ++  YT L+  L +     +A   F  M+     P++
Sbjct: 692 LFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPND 731



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 77/168 (45%)

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
           CV++ GLC  G V E           G  P    Y  LIDG C++  + R   L  EM  
Sbjct: 280 CVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEM 339

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           + ++P    Y A+I    +     +  +L   M E G+  ++  Y ++++ L +C    +
Sbjct: 340 KGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQ 399

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           A  + ++M+     PD +   +L+      G+++EA++L  E + R L
Sbjct: 400 ALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRREL 447



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 82/175 (46%), Gaps = 15/175 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K ++  Y ++I G C     + +++L + M+  GL  N V  T L+ + FK  +
Sbjct: 652 MMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDK 711

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGL--CKSGLVREA-------------IDYFGR 105
             +A +  + ML +       T   L++GL  C+ G++                +D F  
Sbjct: 712 AIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKG 771

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           +   GL P ++ Y A+I  LC+ N + +A  L ++M  +  +PD   + +L+ G+
Sbjct: 772 LISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGF 826


>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
 gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
          Length = 321

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 117/240 (48%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G ++ GLC  ++  D+  L+  M E G   N ++   +MDA  K G  +EA   ++ M 
Sbjct: 13  FGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGFIETMR 72

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  T+VT+ +LIDG CK   +  A++    M   G  PN   Y   + GLCK   ++
Sbjct: 73  SMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVD 132

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF  M ++ +  D   YT LIDG  +     EA +L + M   G       Y +++
Sbjct: 133 DALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAIL 192

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNEMMGRGL 251
             L +   + EA  LF  M G GILPD  L   ++   Y RG+ +D+A+ L  +M   GL
Sbjct: 193 SWLCKGSRINEAHKLFKRMTGSGILPD-WLTFGMMVFGYCRGHRIDDALLLLQQMKSAGL 251



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 113/245 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +   +  Y  +I G C E K   +  +L EM   G   N V   T +    K G+
Sbjct: 71  MRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGK 130

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L   M + +I + V  +  LIDGLC++G + EA      M + G  P    Y A
Sbjct: 131 VDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNA 190

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LCK + I  A  LF  M    ++PD   +  ++ GY +     +AL L  +M   G
Sbjct: 191 ILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAG 250

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y +L+  L+R G + EA  L  EMI RG+ P+      + K+  +  N+   +
Sbjct: 251 LAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALMRKQQTDDSNLVVEL 310

Query: 241 ELQNE 245
           + + E
Sbjct: 311 DYRKE 315



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 100/217 (46%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M E G     V    L+D   KA   ++A  L++ M +       + F  ++D LCK G 
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
             EA  +   M   G+ P +  Y  LIDG CK+  + RA  +  EM  R   P+   Y  
Sbjct: 61  SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
            + G  K+    +AL L   MTE  + LD+  YT+L+ GL + G L EA  L  EM   G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +P      ++L    +   ++EA +L   M G G+L
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGIL 217


>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 418

 Score =  121 bits (303), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+ +L  EM + GL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 122/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E  E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGF------------YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM  + ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EMI +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 117/221 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD  +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 104/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A VLF EM+ +G++P+ + 
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y + I  LC     + ++L+L +M  NG   + V    ++  Y   G+
Sbjct: 253 MMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQ 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   +  EM    +   + T    +  LCK G  +EA ++F  M   G  P++  Y+ 
Sbjct: 313 WKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSV 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   +  +    NLF+ M    ++ D + Y  LID Y K     EA+ +  +M E G
Sbjct: 373 LLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERG 432

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y +++   SR G L +A   F++MI  G+ PD I+  SL++     GN+ +A 
Sbjct: 433 VMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAK 492

Query: 241 ELQNEMMGRGL 251
           EL +EMM RG+
Sbjct: 493 ELISEMMSRGI 503



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K DL  Y  ++ G   E    D   L + M+ NG+ A+  +   L+DAY K G 
Sbjct: 358 MAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGM 417

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  +M +  +     T+  +I    + G + +A+D F +M   GL P+  VY +
Sbjct: 418 MDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNS 477

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI G C    + +A+ L  EM  R +  P+T  + ++I+   K     EA ++ + +  +
Sbjct: 478 LIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHI 537

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  + SL+ G    G +++A  +   MI  GI PD +   +LL  +   G +D+ 
Sbjct: 538 GERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDG 597

Query: 240 IELQNEMMGRGL 251
           + L  EM+ +G+
Sbjct: 598 LILFREMLSKGV 609



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 122/249 (48%), Gaps = 2/249 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEM--KENGLTANTVICTTLMDAYFKAGEPSE 63
           ++ D   Y T++  LC +S+ + +  LL  M  K  G + N V   T++  +F+ GE S+
Sbjct: 186 VEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSK 245

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A +L  EM+   +   VVT+   ID LCK+  + +A     +M   G  P+   Y  +I 
Sbjct: 246 ACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIH 305

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G       +    +F EM +R ++PD     + +    KH   KEA    + M   G   
Sbjct: 306 GYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKP 365

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           DL  Y+ L+ G +  G++ +   LF+ M G GI+ D  +   L+  + +RG MDEA+ + 
Sbjct: 366 DLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIF 425

Query: 244 NEMMGRGLL 252
            +M  RG++
Sbjct: 426 TQMQERGVM 434



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 117/251 (46%), Gaps = 3/251 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +K D+ +   ++  LC   + +D+  +LL  M E G+  +T+  +T++ +  +      A
Sbjct: 150 LKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRA 209

Query: 65  LSLLDEMLDSR--IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           L LL  M+         VV++  +I G  + G V +A + F  M   G+ P+V  Y++ I
Sbjct: 210 LDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYI 269

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK   +++A  +  +M      PD   Y  +I GY     +KE   +   MT  G+ 
Sbjct: 270 DALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLM 329

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+    S +  L + G  +EA   F  M  +G  PD +    LL  +   G + + + L
Sbjct: 330 PDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNL 389

Query: 243 QNEMMGRGLLS 253
            N M G G+++
Sbjct: 390 FNSMEGNGIVA 400



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 118/256 (46%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLT-ANTVICTTLMDAYFKAG 59
           M    +K D  +Y ++I G C+      +K L+SEM   G+   NTV   +++++  K G
Sbjct: 463 MIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEG 522

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              EA  + D ++       V+TF  LIDG    G + +A      M   G+ P+V  Y+
Sbjct: 523 RVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYS 582

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           AL+DG C+   I+    LF EM  + + P T  Y  ++ G         A  + + M E 
Sbjct: 583 ALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES 642

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G  +D++    ++ GL R     EA  LF ++    +  +  +  +++   Y+    +EA
Sbjct: 643 GTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEA 702

Query: 240 IELQNEMMGRGLLSGS 255
            EL + +   GL+  +
Sbjct: 703 NELFDSISATGLVPNA 718



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 103/212 (48%), Gaps = 5/212 (2%)

Query: 46  VICT--TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY- 102
            +CT   LMD   +A  P+   +L    L + ++  V+   +L+  LC +    +A++  
Sbjct: 118 TVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVL 177

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD--MIPDTTAYTALIDGY 160
             RMP+ G+ P+   Y+ ++  LC+ +  +RA +L   M K+     P+  +Y  +I G+
Sbjct: 178 LHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGF 237

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            +     +A NL + M + GV  D+  Y+S +  L +   + +A ++  +MI  G  PD+
Sbjct: 238 FREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDK 297

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +    ++  +   G   E   +  EM  RGL+
Sbjct: 298 VTYNCMIHGYSILGQWKETAGMFREMTRRGLM 329



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 105/236 (44%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D+  Y  ++ G C   + +D  +L  EM   G+   T+    ++   F  G    A 
Sbjct: 574 IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  EM++S   + + T  +++ GLC++    EAI  F ++    +  N+A+   +ID +
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K    E A  LFD +    ++P+ + Y  +I   LK  S +EA N+ + M + G     
Sbjct: 694 YKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSS 753

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
               +++  L   G + +A     ++ G+ I  +      +L     +G   E I+
Sbjct: 754 RLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIK 809



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 109/233 (46%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  + ++I G  +  K E +  +L  M   G+  + V  + L+D Y + G   + L 
Sbjct: 540 RPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLI 599

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EML   ++ T +T+ +++ GL   G    A      M + G   +++    ++ GLC
Sbjct: 600 LFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLC 659

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           + NC + A  LF ++   ++  +      +ID   K    +EA  L + ++  G+  + +
Sbjct: 660 RNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNAS 719

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            Y  ++  L + G ++EA  +F  M   G  P   L  ++++   E+G + +A
Sbjct: 720 TYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKA 772



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/245 (21%), Positives = 111/245 (45%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            + +II  LC E +  +++ +   +   G   + +   +L+D Y   G+  +A  +LD M
Sbjct: 510 FFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAM 569

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   IE  VVT+  L+DG C++G + + +  F  M   G+ P    Y  ++ GL      
Sbjct: 570 ISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRT 629

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A+ +  EM +     D +    ++ G  ++    EA+ L  ++  + V  ++    ++
Sbjct: 630 VGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTM 689

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  + +    +EA  LF  +   G++P+      ++    + G+++EA  + + M   G 
Sbjct: 690 IDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGC 749

Query: 252 LSGSK 256
              S+
Sbjct: 750 APSSR 754



 Score = 74.3 bits (181), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 8/199 (4%)

Query: 61  PSEALSLLDEML--DSRIEV---TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
           PS A++L + +   ++R  V   TV T+ +L+D  C++         FGR    GL  +V
Sbjct: 95  PSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDV 154

Query: 116 AVYTALIDGLCKKNCIERARN-LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
            V   L+  LC     + A N L   MP+  + PDT +Y+ ++    +    + AL+L +
Sbjct: 155 IVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLH 214

Query: 175 RMTEV--GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            M +   G   ++ +Y +++ G  R G + +A  LFHEM+ +G++PD +   S +    +
Sbjct: 215 TMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCK 274

Query: 233 RGNMDEAIELQNEMMGRGL 251
              MD+A  +  +M+  G 
Sbjct: 275 ARAMDKAELVLRQMISNGF 293



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 89/203 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K     YG I+ GL  + +   +K +  EM E+G T +   C  ++    +   
Sbjct: 604 MLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNC 663

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA++L  ++    ++  +     +ID + K     EA + F  +   GL PN + Y  
Sbjct: 664 DDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGV 723

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L K+  +E A N+F  M K    P +     +I   L+     +A N  +++    
Sbjct: 724 MITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKT 783

Query: 181 VDLDLNAYTSLVWGLSRCGHLQE 203
           + L+ +  + ++   SR G  +E
Sbjct: 784 ISLEASTASLMLSLFSRKGKYRE 806


>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Brachypodium distachyon]
          Length = 620

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 129/255 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   ++ +L  Y  ++   C       +  L  E+ ++GL  N VI TTL+  +F A  
Sbjct: 221 MKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANR 280

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+  +   EM    I  TV  +  LIDG  +SG  +EA+  +  M   GL P+    + 
Sbjct: 281 ISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSI 340

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC    ++ A    + M +  +  +  AY ALID + K  +  EAL    RM EVG
Sbjct: 341 IVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVG 400

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y+SL+ G S+   ++ A  ++ EM+ +G+ P+ +   +++  H + G++D A 
Sbjct: 401 IEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAF 460

Query: 241 ELQNEMMGRGLLSGS 255
            L  EM  +G+ S +
Sbjct: 461 RLHKEMAEKGISSNA 475



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 109/219 (49%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           LP    I+ GL    +F+    L  EM   G+  + V   TL++A    G+ ++A  + +
Sbjct: 125 LPACNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWEVWN 184

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           +M+  RI+  VVT+  +I  LC+ G V EA   F  M + G+ PN+  Y AL+   CK++
Sbjct: 185 QMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRD 244

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            + R   L+ E+ K  ++P+    T LI G+       +  N    M   G+   +  Y 
Sbjct: 245 GVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYN 304

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           SL+ G  R G+ QEA  ++ +M   G+ PDE  C  +++
Sbjct: 305 SLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVR 343



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 100/214 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I   +P+Y ++I G       +++  +  +M   GL  +   C+ ++      G+
Sbjct: 291 MHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSIIVRGLCCGGQ 350

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A   L+ M  S I +    +  LID  CK G + EA+    RM + G+ PNV  Y++
Sbjct: 351 VQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSS 410

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  KK  +E A  ++ EM  + + P+   YTA+I G+ K      A  L   M E G
Sbjct: 411 LIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKG 470

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +  +    + LV GL R   +Q+A +   +  G+
Sbjct: 471 ISSNAITVSVLVDGLCRESRVQDAVMFIMKYAGQ 504



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 100/207 (48%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T+I G  + ++  D K    EM   G+     +  +L+D  F++G   EAL++  +M   
Sbjct: 270 TLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRV 329

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +     T  +++ GLC  G V+ A  +   M   G++ N A Y ALID  CK   +  A
Sbjct: 330 GLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEA 389

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
                 M +  + P+   Y++LIDG+ K    + A+ +   M   GV+ ++  YT+++ G
Sbjct: 390 LATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHG 449

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEI 221
            ++ G L  A  L  EM  +GI  + I
Sbjct: 450 HAKFGDLDAAFRLHKEMAEKGISSNAI 476



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 92/204 (45%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  ++D   KA        L DEML   +  ++VT+  L++     G + +A + + +M 
Sbjct: 128 CNAILDGLVKARRFDRVWKLFDEMLSRGMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMV 187

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
              + PNV  Y+ +I  LC++ C+  A  LF  M +  + P+   Y AL+  + K +   
Sbjct: 188 ARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVN 247

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
             L L   + + G+  +    T+L+ G      + + +  F EM   GI P   +  SL+
Sbjct: 248 RTLTLYQELLKSGLVPNAVIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLI 307

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
              +  G   EA+ +  +M   GL
Sbjct: 308 DGAFRSGYAQEALTVYQDMTRVGL 331



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 3/171 (1%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VL+  L + GL  +A+  F R+P     P +    A++DGL K    +R   LFDEM  R
Sbjct: 98  VLVIALSQMGLHDDALSVFCRLPTL---PALPACNAILDGLVKARRFDRVWKLFDEMLSR 154

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            M+P    Y  L++         +A  + N+M    +D ++  Y++++  L   G + EA
Sbjct: 155 GMVPSLVTYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEA 214

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             LF  M   G+ P+     +L+  H +R  ++  + L  E++  GL+  +
Sbjct: 215 ERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNA 265



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 18/236 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  +   Y  +I   C +    ++    + M E G+  N V  ++L+D + K  +
Sbjct: 361 MQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRK 420

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  EM+   +E  V+T+  +I G  K G +  A      M + G+  N    + 
Sbjct: 421 MEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSV 480

Query: 121 LIDGLCKKNCIERARNLFDEMPKRD------------------MIPDTTAYTALIDGYLK 162
           L+DGLC+++ ++ A     +   +                    I ++  Y  LI G   
Sbjct: 481 LVDGLCRESRVQDAVMFIMKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYMTLIYGLYI 540

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
              + EA    + M E  +  D   Y+ L+ G    G++  A +L+ +M+  G+ P
Sbjct: 541 DGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKIGVKP 596


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 126/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +Y T++ G+C E   E +  +L  M   GL  N V   T++     A    +A  LL
Sbjct: 294 DIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELL 353

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM D+   +  VTF +L+D  C++GLV   I+   +M + G  P+V  YT +I+G CK+
Sbjct: 354 AEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKE 413

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I+ A  L   M      P+T +YT ++ G    E + +A +L ++M E G   +   +
Sbjct: 414 GLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTF 473

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L + G +++A  L  +M+  G  PD I   +++    + G  DEA+EL N M+ 
Sbjct: 474 NTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 533

Query: 249 RGL 251
           +G+
Sbjct: 534 KGM 536



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 123/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ GLC   ++E ++ LL+EM +N    + V    L+D + + G 
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGL 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL++ML+      V+T+  +I+G CK GL+ EA+     M   G  PN   YT 
Sbjct: 381 VYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTI 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC       A +L  +M ++   P+   +  +I+   K    ++A+ L  +M   G
Sbjct: 441 VLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL +Y++++ GL + G   EA  L + M+ +G+ P+ I+  S+     + G ++  I
Sbjct: 501 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVI 560

Query: 241 EL 242
           ++
Sbjct: 561 QM 562



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 112/242 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  ++ GLC+  ++   + L+ EM   G   N V   TL+    + G       +L
Sbjct: 224 DVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVL 283

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+D      +  +  ++DG+CK G +  A +   RMP +GL PNV  Y  ++ GLC  
Sbjct: 284 AQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSA 343

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              E+A  L  EM   D   D   +  L+D + ++      + L  +M E G   D+  Y
Sbjct: 344 ERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITY 403

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+++ G  + G + EA +L   M   G  P+ I    +LK         +A +L ++M+ 
Sbjct: 404 TTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIE 463

Query: 249 RG 250
           +G
Sbjct: 464 QG 465



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 114/244 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NT+  T ++     A    +A  L+
Sbjct: 399 DVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLM 458

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M++       VTF  +I+ LCK GLV +AI+   +M   G  P++  Y+ +IDGL K 
Sbjct: 459 SQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKA 518

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + A  L + M  + M P+T  Y+++     K       + + + + +V +  D   Y
Sbjct: 519 GKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLY 578

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L + G    A      M+  G +P+E     L++     G + EA E+  E+  
Sbjct: 579 NAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCS 638

Query: 249 RGLL 252
           +G L
Sbjct: 639 KGAL 642



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 114/257 (44%), Gaps = 11/257 (4%)

Query: 2   KGKNIKADLPL------YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAY 55
             + + A +P+      Y  ++  LC   +  D+  +L EM+  G      +   +++A 
Sbjct: 101 SARRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAA 160

Query: 56  FKAGEPS---EALSLLDEMLDSRIEVTVVTFCVLIDGLC-KSGLVREAIDYFGRMP-DFG 110
              G       A+ +L ++      + V    ++++ +C + G V EA+     +P  FG
Sbjct: 161 CSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFG 220

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+V  Y A++ GLC      R ++L +EM +    P+   +  LI    ++  F+   
Sbjct: 221 CDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVH 280

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            +  +M + G   D+  Y +++ G+ + GHL+ A  +   M   G+ P+ +   ++LK  
Sbjct: 281 QVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGL 340

Query: 231 YERGNMDEAIELQNEMM 247
                 ++A EL  EM 
Sbjct: 341 CSAERWEQAEELLAEMF 357



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/244 (20%), Positives = 102/244 (41%), Gaps = 8/244 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ G C   +   ++ L + +    +  N      ++ A    G  ++ALS+LDEM 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 73  DSRIEVTVVTFCVLIDGLCK---SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
                     + V+++  C     G  R A+     +   G   +V     +++ +C + 
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 130 -CIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
             ++ A  L  ++P      PD  +Y A++ G    + +    +L   M  VG   ++  
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + +L+  L R G  +    +  +M+  G  PD  +  ++L    + G+++ A E+ + M 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 248 GRGL 251
             GL
Sbjct: 323 SYGL 326


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+GK  K D+  Y  +I G C E + +++ + L ++   G  ++ +    ++ +    G 
Sbjct: 232 MRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGR 291

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL  ML      +VVTF +LI+ LC+ GL+ +A++    MP  G  PN   +  
Sbjct: 292 WMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNP 351

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C +  I+RA    + M  R   PD   Y  L+    K     +A+ + ++++  G
Sbjct: 352 LIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKG 411

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L +Y +++ GL + G  + A  L  EM  +G+ PD I C S++      G + EAI
Sbjct: 412 CSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAI 471

Query: 241 ELQNEMMGRGL 251
           +  + + G G+
Sbjct: 472 KFFHYLKGFGI 482



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 121/282 (42%), Gaps = 35/282 (12%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  +   Y  ++  LC   K + +  +L    ++    + V CT L+DA  K     +A
Sbjct: 166 SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQA 225

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH------------ 112
           + L +EM     +  VVT+ VLI G CK G + EAI +  ++P +G              
Sbjct: 226 MKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRS 285

Query: 113 -----------------------PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
                                  P+V  +  LI+ LC+K  + +A N+ + MPK    P+
Sbjct: 286 LCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPN 345

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
           + ++  LI G+   +    A+     M   G   D+  Y  L+  L + G + +A V+  
Sbjct: 346 SRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILS 405

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           ++  +G  P  I   +++    + G  + A+EL  EM  +GL
Sbjct: 406 QLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGL 447



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 89/181 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y  ++  LC + K +D+ ++LS++   G + + +   T++D   K G+
Sbjct: 372 MVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGK 431

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ LL+EM    ++  ++T   ++ GL + G V EAI +F  +  FG+ PN  +Y +
Sbjct: 432 AELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNS 491

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLCK      A +   +M      P   +YT LI G       +EA  L N +   G
Sbjct: 492 IMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG 551

Query: 181 V 181
           +
Sbjct: 552 L 552



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 116/257 (45%), Gaps = 3/257 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+     +I   C   + +++  ++  ++E+G   +      L++AY K+GE
Sbjct: 95  MTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGE 154

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL +LD    + +     T+  ++  LC  G +++A+    R      +P+V   T 
Sbjct: 155 IEEALRVLDH---TSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTV 211

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK++ + +A  LF+EM  +   PD   Y  LI G+ K     EA+    ++   G
Sbjct: 212 LIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYG 271

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ ++  ++  L   G   +A  L   M+ +G  P  +    L+    ++G + +A+
Sbjct: 272 CQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKAL 331

Query: 241 ELQNEMMGRGLLSGSKN 257
            +   M   G    S++
Sbjct: 332 NVLEMMPKHGHTPNSRS 348



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 5/227 (2%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + E+    L  M   G   + V CT L+  + K G    A  ++  + +S   +   ++ 
Sbjct: 84  ELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYN 143

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDF-GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
           VLI+  CKSG + EA+    R+ D   + PN A Y A++  LC +  +++A  + D   +
Sbjct: 144 VLINAYCKSGEIEEAL----RVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQ 199

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
               PD    T LID   K     +A+ L N M   G   D+  Y  L+ G  + G L E
Sbjct: 200 SKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDE 259

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           A +   ++   G   D I    +L+     G   +A++L   M+ +G
Sbjct: 260 AIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 306



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 109/243 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC +     +  +L  M ++G T N+     L+  +        A+  L+ M+
Sbjct: 314 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  +VT+ +L+  LCK G V +A+    ++   G  P++  Y  +IDGL K    E
Sbjct: 374 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 433

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L +EM  + + PD    T+++ G  +     EA+   + +   G+  +   Y S++
Sbjct: 434 LAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIM 493

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL +      A     +M+  G  P E    +L+K     G  +EA +L NE+  RGL+
Sbjct: 494 MGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLV 553

Query: 253 SGS 255
             S
Sbjct: 554 KKS 556



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/210 (22%), Positives = 96/210 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C     + +   L  M   G   + V    L+ A  K G+  +A+ +L ++ 
Sbjct: 349 FNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 408

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 +++++  +IDGL K G    A++    M   GL P++   T+++ GL ++  + 
Sbjct: 409 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVH 468

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F  +    + P+   Y +++ G  K +    A++    M   G      +YT+L+
Sbjct: 469 EAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLI 528

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
            G++  G  +EA  L +E+  RG++   ++
Sbjct: 529 KGITYEGLAEEASKLSNELYSRGLVKKSLI 558



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 3/198 (1%)

Query: 56  FKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
            + GE  E    L+ M +      VV    LI   CK G  + A    G + + G   + 
Sbjct: 80  IRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDA 139

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
             Y  LI+  CK   IE A  + D      + P+   Y A++         K+A+ + +R
Sbjct: 140 NSYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQAMQVLDR 196

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
             +     D+   T L+    +   + +A  LF+EM G+G  PD +    L+K   + G 
Sbjct: 197 QLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGR 256

Query: 236 MDEAIELQNEMMGRGLLS 253
           +DEAI    ++   G  S
Sbjct: 257 LDEAIIFLKKLPSYGCQS 274



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 3/161 (1%)

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L ++G + E   +   M + G  P+V   TALI   CK    + A  +   + +   + D
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
             +Y  LI+ Y K    +EAL +   +    V  +   Y +++  L   G L++A  +  
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +     PD + C  L+    +   + +A++L NEM G+G
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKG 236


>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 418

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 120/221 (54%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+ ++    + L++   KA +  +A  L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+  V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  E+G++   ++L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYM 413



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 109/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +++D+  Y  +I GLC  SK +D+  L  EM +NGL  N V  TTL+D + K   
Sbjct: 197 MQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++      G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVV 417



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 119/235 (50%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+  +V  Y+ LI+GLCK + ++
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 102/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+     + + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H +   +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNRRVDVAMEIYKQMLSQSL 272



 Score = 37.0 bits (84), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI+ D   Y  +I GLC E +  D++ +L EM   GL       T +++ + + G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGD 396

Query: 61  PSEALSLLDEMLDSRIEVTVVT 82
               L LL EM       +VVT
Sbjct: 397 VWTGLKLLKEMQRDGYMPSVVT 418


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 129/246 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  +L  Y  ++  LC + + +D+  +  EM+E G++ N V   TL+    +  +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  ++D+M    I   ++T+  LIDG C  G + +A+     +   GL P++  Y  
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C+K     A  +  EM +R + P    YT LID + + ++ ++A+ L+  M E+G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D++ Y+ L+ G    G + EA  LF  M+ +   P+E++  +++  + + G+   A+
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498

Query: 241 ELQNEM 246
           +L  EM
Sbjct: 499 KLLKEM 504



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 119/244 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y T+I G C + + E +K L  EM + GL AN    T L++  FK G   +   + 
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M +  +   + T+  +++ LCK G  ++A   F  M + G+  N+  Y  LI GLC++
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  + D+M    + P+   Y  LIDG+       +AL+L   +   G+   L  Y
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             LV G  R G    A  +  EM  RGI P ++    L+       NM++AI+L+  M  
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436

Query: 249 RGLL 252
            GL+
Sbjct: 437 LGLV 440



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 123/243 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +G +I G C   + E S  LL E+ E G + N VI TTL+D   K GE  +A  L 
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM    +     T+ VLI+GL K+G+ ++  + + +M + G+ PN+  Y  +++ LCK 
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              + A  +FDEM +R +  +   Y  LI G  +     EA  + ++M   G++ +L  Y
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G    G L +A  L  ++  RG+ P  +    L+     +G+   A ++  EM  
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401

Query: 249 RGL 251
           RG+
Sbjct: 402 RGI 404



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 121/245 (49%), Gaps = 1/245 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K    LY  II           S    +EM +NG    +     L+     +   ++  S
Sbjct: 91  KTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS 150

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
             +E   S++ + V +F +LI G C++G + ++ D    + +FG  PNV +YT LIDG C
Sbjct: 151 FFNEN-KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           KK  IE+A++LF EM K  ++ +   YT LI+G  K+   K+   +  +M E GV  +L 
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y  ++  L + G  ++A  +F EM  RG+  + +   +L+        ++EA ++ ++M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 247 MGRGL 251
              G+
Sbjct: 330 KSDGI 334



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 8/241 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  ++  Y T+I GLC E K  ++  ++ +MK +G+  N +   TL+D +   G+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +ALSL  ++    +  ++VT+ +L+ G C+ G    A      M + G+ P+   YT 
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   + + +E+A  L   M +  ++PD   Y+ LI G+       EA  L   M E  
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD--------EILCISLLKKHYE 232
            + +   Y +++ G  + G    A  L  EM  + + P+        E+LC     K  E
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533

Query: 233 R 233
           R
Sbjct: 534 R 534


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K ++  YGT++ G   +    +   LL  M  NG+  +  + + L+ AY K G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  +M    +    VT+  +I  LCKSG V +A+ YF +M D GL P   VY +
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC  N  ERA  L  EM  R +  +T  + ++ID + K     E+  L   M  +G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y +L+ G    G + EA  L   M+  G+ P+ +   +L+  + +   M++A+
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 567 VLFKEMESSGV 577



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y +II  LC     + +  +L+ M +NG+  + +   +++  Y  +G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+ +L+D LCK+G   EA   F  M   GL P +  Y  
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + PD   ++ LI  Y K     +A+ + ++M + G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +++  L + G +++A + F +MI  G+ P  I+  SL+         + A 
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 462 ELILEMLDRGI 472



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 127/254 (50%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G     D+  Y T+I G   E   + +     EM + G+  + V   +++ A  KA   
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +A+ +L+ M+ + +    +T+  ++ G C SG  +EAI +  +M   G+ P+V  Y+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +D LCK      AR +FD M KR + P+ T Y  L+ GY    +  E   L + M   G+
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D   ++ L+   ++ G + +A ++F +M  +G+ P+ +   +++    + G +++A+ 
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427

Query: 242 LQNEMMGRGLLSGS 255
              +M+  GL  G+
Sbjct: 428 YFEQMIDEGLSPGN 441



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y ++I GLC  +K+E ++ L+ EM + G+  NT+   +++D++ K G   E+  L + M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++  V+T+  LI+G C +G + EA+     M   GL PN   Y+ LI+G CK + +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  LF EM    + PD   Y  ++ G  +      A  L  R+TE G  ++L+ Y  +
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622

Query: 192 VWGLSRCGHLQEARVLFHEM 211
           + GL +     +A  +F  +
Sbjct: 623 LHGLCKNKLTDDALQMFQNL 642



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 4/252 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           K  + D   +  ++ GLC + +  D+  ++L  M E G   N      L+          
Sbjct: 116 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQ 175

Query: 63  EALSLLDEMLDSR---IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           EAL LL  M D R       VV++  +I+G  K G   +A   +  M D G+ P+V  Y 
Sbjct: 176 EALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYN 235

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++I  LCK   +++A  + + M K  ++PD   Y +++ GY      KEA+    +M   
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD 295

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV+ D+  Y+ L+  L + G   EAR +F  M  RG+ P+     +LL+ +  +G + E 
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 355

Query: 240 IELQNEMMGRGL 251
             L + M+  G+
Sbjct: 356 HGLLDLMVRNGI 367



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 100/215 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  +   YG +I  LC   + ED+ L   +M + GL+   ++  +L+       +
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+ EMLD  I +  + F  +ID  CK G V E+   F  M   G+ PNV  Y  
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C    ++ A  L   M    + P+T  Y+ LI+GY K    ++AL L   M   G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           V  D+  Y  ++ GL +      A+ L+  +   G
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 117/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  ++  LC   +  +++ +   M + GL        TL+  Y   G 
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD M+ + I      F +LI    K G V +A+  F +M   GL+PN   Y A
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK   +E A   F++M    + P    Y +LI G      ++ A  L   M + G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   + S++    + G + E+  LF  M+  G+ P+ I   +L+  +   G MDEA+
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 241 ELQNEMMGRGL 251
           +L + M+  GL
Sbjct: 532 KLLSGMVSVGL 542



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 110/234 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K ++  Y T+I G C+  K +++  LLS M   GL  NTV  +TL++ Y K     +AL
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM  S +   ++T+ +++ GL ++     A + + R+ + G    ++ Y  ++ GL
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK    + A  +F  +   D+  +   +  +ID  LK     EA +L    +  G+  + 
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 686

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y  +   +   G L+E   LF  M   G   D  +   ++++  +RG +  A
Sbjct: 687 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 99/208 (47%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            + +II   C E +  +S+ L   M   G+  N +   TL++ Y  AG+  EA+ LL  M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++   VT+  LI+G CK   + +A+  F  M   G+ P++  Y  ++ GL +    
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A+ L+  + +     + + Y  ++ G  K++   +AL +   +  + + L+   +  +
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM 657

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  L + G   EA+ LF      G++P+
Sbjct: 658 IDALLKVGRNDEAKDLFVAFSSNGLVPN 685



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 4/199 (2%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID-YFGRMPDFGLHPNV 115
           +AG      + L  ++     V  + F  L+ GLC      +A+D    RM + G  PNV
Sbjct: 99  RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKR---DMIPDTTAYTALIDGYLKHESFKEALNL 172
             Y  L+ GLC +N  + A  L   M         PD  +YT +I+G+ K     +A + 
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            + M + G+  D+  Y S++  L +   + +A  + + M+  G++PD +   S+L  +  
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278

Query: 233 RGNMDEAIELQNEMMGRGL 251
            G   EAI    +M   G+
Sbjct: 279 SGQPKEAIGFLKKMRSDGV 297



 Score = 67.4 bits (163), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 91/204 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K +   Y T+I G C  S+ ED+ +L  EM+ +G++ + +    ++   F+   
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L   + +S  ++ + T+ +++ GLCK+ L  +A+  F  +    L      +  
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID L K    + A++LF       ++P+   Y  + +  +     +E   L   M + G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
             +D      +V  L + G +  A
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRA 740


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 123/254 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K +   +  YG +I G C   +FE    LL+EM   GL  N  +   ++DA FK G 
Sbjct: 262 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGL 321

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A   +  M +      + T+  +I+  CK G ++EA ++  +  + GL PN   YT 
Sbjct: 322 VTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTP 381

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   CK+    +A  +   + +    PD  +Y A I G + H     AL ++ +M E G
Sbjct: 382 LMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKG 441

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y  L+ GL + G     ++L  EM+ R + PD  +  +L+      G +DEAI
Sbjct: 442 VFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAI 501

Query: 241 ELQNEMMGRGLLSG 254
           ++   ++ +G+  G
Sbjct: 502 KIFKVIIRKGVDPG 515



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 110/220 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D  +Y  ++ GLC   +F   KLLLSEM +  +  +  +  TLMD + + GE
Sbjct: 437 MMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGE 496

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +   ++   ++  +V +  +I G CK G + +A+    +M +    P+   Y+ 
Sbjct: 497 LDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYST 556

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG  K++ +  A  +F +M K    P+   YT+LI+G+ K      A  +   M    
Sbjct: 557 VIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFD 616

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  ++  YT+LV G  + G  ++A  +F  M+  G  P++
Sbjct: 617 LVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPND 656



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 114/244 (46%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K DL  YG  I G+ +  + + + ++  +M E G+  +  I   LM    K G       
Sbjct: 408 KPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKL 467

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL EMLD  ++  V  F  L+DG  ++G + EAI  F  +   G+ P +  Y A+I G C
Sbjct: 468 LLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFC 527

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +  A +  ++M      PD   Y+ +IDGY+K      AL +  +M +     ++ 
Sbjct: 528 KFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVI 587

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YTSL+ G  +   +  A  +F  M    ++P+ +   +L+   ++ G  ++A  +   M
Sbjct: 588 TYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELM 647

Query: 247 MGRG 250
           +  G
Sbjct: 648 LMNG 651



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 116/249 (46%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK     +  Y  II G C +   + +   L E+K  G+         L++ + KAGE  
Sbjct: 229 GKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFE 288

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
               LL EM    + + V  F  +ID   K GLV +A +   RM + G  P++  Y  +I
Sbjct: 289 AVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMI 348

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  CK   I+ A    ++  +R ++P+  +YT L+  Y K   + +A  +  R+ E+G  
Sbjct: 349 NFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEK 408

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            DL +Y + + G+   G +  A ++  +M+ +G+ PD  +   L+    + G       L
Sbjct: 409 PDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLL 468

Query: 243 QNEMMGRGL 251
            +EM+ R +
Sbjct: 469 LSEMLDRNV 477



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 117/239 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I   C   + +++   L + KE GL  N    T LM AY K G+  +A  +L
Sbjct: 340 DITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGML 399

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             + +   +  +V++   I G+   G +  A+    +M + G+ P+  +Y  L+ GLCK 
Sbjct: 400 FRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKN 459

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                 + L  EM  R++ PD   +  L+DG++++    EA+ +   +   GVD  +  Y
Sbjct: 460 GRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGY 519

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            +++ G  + G + +A    ++M      PDE    +++  + ++ +M  A+++  +MM
Sbjct: 520 NAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMM 578



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 13/261 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICT-TLMDAYFKAG 59
           MK +++K     +  +I         + +  L   ++E      TV+ + +L++   K+G
Sbjct: 117 MKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSG 176

Query: 60  EPSEALSLLDEMLDSRIEVTVV----TFCVLIDGLCKSGLVREA----IDYFGRMPDFGL 111
           +   AL L D+ML +      V    T  +++ GLC  G + E      D +G+    G 
Sbjct: 177 KVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGK----GC 232

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
            P+V  Y  +IDG CKK  ++ A     E+  + ++P    Y ALI+G+ K   F+    
Sbjct: 233 VPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQ 292

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
           L   M   G+++++  + +++    + G + +A      M   G  PD     +++    
Sbjct: 293 LLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSC 352

Query: 232 ERGNMDEAIELQNEMMGRGLL 252
           + G + EA E   +   RGLL
Sbjct: 353 KGGRIKEADEFLEKAKERGLL 373



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 30/234 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K ++  Y ++I G C ++    ++ +   MK   L  N V  TTL+  +FKAG+
Sbjct: 577 MMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGK 636

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG----LVREA----------IDYFGRM 106
           P +A S+ + ML +       TF  LI+GL  +     L+ E           +D+F  M
Sbjct: 637 PEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMM 696

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G    +A Y ++I  LCK   ++ A+ L  +M  +  + D+  +TA++ G       
Sbjct: 697 LSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKS 756

Query: 167 KEALNLKNRMTEVGVDLDLNA---YTSLVWGLS-----RCGHLQEARVLFHEMI 212
           KE  N+        +  DLN     T++ + L+       G L EA V+   +I
Sbjct: 757 KEWRNI--------ISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLI 802


>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 458

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 129/239 (53%), Gaps = 5/239 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGT+I GLC      D++  L  +++     + V+ TT++D   K    ++A  L  EM+
Sbjct: 143 YGTLINGLCKVGG--DTRAALQLLRQ-AFEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMV 199

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S I   VVT+  LIDG C  G + EA+  F +M    ++PNV  +  L+D  CK+  IE
Sbjct: 200 ASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIE 259

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGY-LKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            A+N+ + M ++D+  D  AY++L++GY L +E FK A ++   M E  +  D+ +Y  +
Sbjct: 260 EAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFK-AQSIFKTMAERELSYDVRSYNIM 318

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +    +   + EA  LF EM  + I PD +   +L+    + G +  A+EL +EM  RG
Sbjct: 319 INEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRG 377



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 113/218 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +  + D+ +Y T+I  +C ++   D+  L  EM  +G++ N V  T L+D +   G+  E
Sbjct: 166 QAFEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEE 225

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL L  +M+   I   V TF  L+D  CK G + EA +    M +  L  +V  Y++L++
Sbjct: 226 ALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMN 285

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C  N + +A+++F  M +R++  D  +Y  +I+ + K +   EA+ L   M    +  
Sbjct: 286 GYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFP 345

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           D+  Y +L+ GL + G L  A  L  EM  RG  P+ I
Sbjct: 346 DVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNII 383



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 92/192 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  ++  Y  +I G C+  K E++  L  +M    +  N      L+DA+ K G+
Sbjct: 198 MVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGK 257

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L+ M++  ++  VV +  L++G C    V +A   F  M +  L  +V  Y  
Sbjct: 258 IEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNI 317

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+  CK   ++ A  LF+EMP + + PD   Y  LIDG  K      A+ L + M + G
Sbjct: 318 MINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRG 377

Query: 181 VDLDLNAYTSLV 192
              ++  Y  +V
Sbjct: 378 EPPNIITYCPIV 389



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 83/164 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI  ++  +  ++   C E K E++K +L+ M E  L ++ V  ++LM+ Y    E
Sbjct: 233 MISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNE 292

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A S+   M +  +   V ++ ++I+  CK  +V EAI  F  MP   + P+V  Y  
Sbjct: 293 VFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHT 352

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
           LIDGLCK   +  A  L DEM  R   P+   Y  ++D   K+ 
Sbjct: 353 LIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKNH 396



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 4/168 (2%)

Query: 87  IDGLCKSGLVREAIDY-FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           I G+C++G ++ A+++ +  +   G   +   Y  LI+GLCK     RA     ++ ++ 
Sbjct: 111 IKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAAL---QLLRQA 167

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             PD   YT +ID   K     +A +L   M   G+  ++  YT+L+ G    G L+EA 
Sbjct: 168 FEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEAL 227

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
            LF +MI   I P+      L+    + G ++EA  + N MM + L S
Sbjct: 228 GLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKS 275


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 129/254 (50%), Gaps = 11/254 (4%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKEN---GLTANTVICTTLMDAYFKAGEPSE-- 63
           D+  Y  ++ GLC E++ +++  LL  M ++   G   + V   T+++ +FK G  ++  
Sbjct: 162 DVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLT 221

Query: 64  ------ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
                 A+ +L+ M+ + +    +T+  ++ G C SG  +EAI    +M   G+ PNV  
Sbjct: 222 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 281

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y++L++ LCK      AR +FD M KR + PD   Y  L+ G+ K     E+  L + M 
Sbjct: 282 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMV 341

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
            +GV  D+  Y +L+ G    G + EA  L   M+  G+ PD +   +L+  +     MD
Sbjct: 342 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 401

Query: 238 EAIELQNEMMGRGL 251
           +A+ L  EM+  G+
Sbjct: 402 DALALFKEMVSSGV 415



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 112/228 (49%), Gaps = 8/228 (3%)

Query: 2   KGKNIKADLPLYGTIIWGLC---IESKFEDSKL-----LLSEMKENGLTANTVICTTLMD 53
           +G     D+  Y T++ G     I++K     +     +L+ M +NG+  + +   +++ 
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 252

Query: 54  AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
            Y  +G+P EA+  L +M    +E  VVT+  L++ LCK+G   EA   F  M   GL P
Sbjct: 253 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 312

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           ++A Y  L+ G CK+  +  +  LFD M +  + PD   Y  LIDG        EA  L 
Sbjct: 313 DIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 372

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
             M  VGV  D+  Y +L+ G  R   + +A  LF EM+  G+ P+ I
Sbjct: 373 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNII 420



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 97/215 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   Y +I+ G C   + +++   L +M+ +G+  N V  ++LM+   K G 
Sbjct: 235 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 294

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + D M    +E  + T+  L+ G CK G V E+   F  M   G+ P++  Y  
Sbjct: 295 STEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 354

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L   M    + PD   Y  LI+GY +     +AL L   M   G
Sbjct: 355 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 414

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           V  ++  Y  ++ GL        A+ L+  +   G
Sbjct: 415 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 117/239 (48%), Gaps = 2/239 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y T++ G C E +  +S+ L   M   G+  + +   TL+D    AG+
Sbjct: 305 MTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 364

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M+   ++  +VT+  LI+G C+   + +A+  F  M   G+ PN+  Y  
Sbjct: 365 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 424

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GL        A+ L+  + K     + + Y  ++ G  K+    EAL +   +    
Sbjct: 425 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 484

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH-YERGNMDE 238
           + L+   +  ++  L +CG + EA+ LF      G++PD +   SL+ ++  E+G+++E
Sbjct: 485 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPD-VRTYSLMAENLIEQGSLEE 542



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 112/234 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T+I G C+  K +++  LL+ M   G+  + V   TL++ Y +     +AL
Sbjct: 345 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 404

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM+ S +   ++T+ +++ GL  +     A + +  +   G    ++ Y  ++ GL
Sbjct: 405 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 464

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N  + A  +F  +   D+  +T  +  +I   LK     EA +L    +  G+  D+
Sbjct: 465 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 524

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y+ +   L   G L+E   LF  M   G   D  +  S+++K  +RG++  A
Sbjct: 525 RTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 15/207 (7%)

Query: 60  EPSEALSLLDEMLDS---RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
            P+ A+S  + M  +   ++  TV T+ +LI   C++G +       G +   G   +  
Sbjct: 69  SPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAI 128

Query: 117 VYTALIDGLCKKNCIERARNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
            +T L+ GLC       A ++    M +   IPD  +Y  L+ G       +EAL L + 
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 176 MTE---VGVDLDLNAYTSLVWGLSRCG--------HLQEARVLFHEMIGRGILPDEILCI 224
           M +    G   D+ +Y +++ G  + G         + +A  + + M+  G++PD +   
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYN 248

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
           S+L  +   G   EAI    +M   G+
Sbjct: 249 SILHGYCSSGQPKEAIGTLKKMRSDGV 275


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 120/243 (49%), Gaps = 9/243 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG- 59
           M+ + ++ +   +  II GLC   K E+++   + +K   +  +  I T L++ Y +A  
Sbjct: 496 MESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAAL 555

Query: 60  -----EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
                E  EA  LL  ML+  ++ + V +  +   LC +G +  A   F      G  P+
Sbjct: 556 IEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPD 615

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
              YT +I+G CK NC+  A  LF +M +R + PD   YT +I+GY K    +EA  L  
Sbjct: 616 AVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFK 675

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL--CISLL-KKHY 231
            M E G+  D+ AYT ++ GL   GH + A  L++EMI  G+ P   L  CI    K+ +
Sbjct: 676 DMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGATLKRCIQKANKRQF 735

Query: 232 ERG 234
            R 
Sbjct: 736 HRS 738



 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 129/296 (43%), Gaps = 41/296 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K   +  D+  Y T+I G  ++ K  +++ L  EM+E G   + V    L   +F+   
Sbjct: 426 LKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRT 485

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL+ M    +E    T  ++I+GLC +G V EA ++F  +    +  +V +YTA
Sbjct: 486 DFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTA 545

Query: 121 LIDGLCKKNCIER-----------------------------------------ARNLFD 139
           L++G C+   IE+                                         A  LF+
Sbjct: 546 LVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFN 605

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
                   PD   YT +I+GY K     EA  L   M E G+  D   YT ++ G  +  
Sbjct: 606 LFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMN 665

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            L+EA  LF +M  RGI PD I    ++K     G+ + A +L NEM+  G+  G+
Sbjct: 666 CLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPGA 721



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 113/249 (45%), Gaps = 6/249 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y  +   LC   K +D+  +L E+K   L  +    TTL++ YF  G+P EA SL 
Sbjct: 399 DRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLF 458

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM +   +  VV + VL  G  ++    EA+D    M   G+ PN   +  +I+GLC  
Sbjct: 459 KEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSA 518

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYL------KHESFKEALNLKNRMTEVGVD 182
             +E A   F+ +    +      YTAL++GY       K    KEA  L   M E+ + 
Sbjct: 519 GKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMK 578

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
                Y+ +   L   G+++ A  LF+  I  G  PD +    ++  + +   + EA EL
Sbjct: 579 PSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHEL 638

Query: 243 QNEMMGRGL 251
             +M  RG+
Sbjct: 639 FKDMKERGI 647



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 111/250 (44%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + +N       Y  +I G C E+K ++++ +  EM++ GL  +  +   L+  Y  +   
Sbjct: 287 RTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNF 346

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +AL++   M+   I+   V F  ++  L + G   E +D F    + GL  +   Y  L
Sbjct: 347 DKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNIL 406

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            D LCK   ++ A  + DE+    +  D   YT LI+GY       EA +L   M E G 
Sbjct: 407 FDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGF 466

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D+ AY  L  G  R     EA  L + M  +G+ P+      +++     G ++EA E
Sbjct: 467 KPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEE 526

Query: 242 LQNEMMGRGL 251
             N + G  +
Sbjct: 527 FFNWLKGESV 536



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 117/243 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D+ +Y  ++ G C    F+ +  +   M   G+  N VI + ++    + G 
Sbjct: 321 MEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGR 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + + +E  +S + +    + +L D LCK G V +A+     +    L  ++  YT 
Sbjct: 381 ALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTT 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G   +     A++LF EM +R   PD  AY  L  G+ ++ +  EA++L N M   G
Sbjct: 441 LINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQG 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ +   +  ++ GL   G ++EA   F+ + G  +     +  +L+  + E   ++++ 
Sbjct: 501 VEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSH 560

Query: 241 ELQ 243
           EL+
Sbjct: 561 ELK 563



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 117/279 (41%), Gaps = 37/279 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC +  +E+   +  EMKE G+  ++    T ++   K        ++L +  
Sbjct: 228 YTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYR 287

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC------ 126
                V    +  +I G C    + EA   F  M   GL P+V VY AL+ G C      
Sbjct: 288 TRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFD 347

Query: 127 --------------KKNCI----------ERAR-----NLFDEMPKRDMIPDTTAYTALI 157
                         K NC+          E  R     ++F+E  +  +  D  AY  L 
Sbjct: 348 KALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILF 407

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D   K     +A+ + + +  + +D+D+  YT+L+ G    G   EA+ LF EM  RG  
Sbjct: 408 DALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFK 467

Query: 218 PDEILCISLLKKHYERGNMD-EAIELQNEMMGRGLLSGS 255
           PD ++  ++L   + R   D EA++L N M  +G+   S
Sbjct: 468 PD-VVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNS 505



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 92/226 (40%)

Query: 31  LLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
            LL   K   +  N +    L++   K  E   AL L        +     T+ ++I  L
Sbjct: 176 FLLQTRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKAL 235

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           CK G     +  F  M + G+  +   Y   I+GLCK N  +    +  +   R+     
Sbjct: 236 CKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHK 295

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            AYTA+I G+       EA ++   M + G+  D+  Y +LV G     +  +A  ++  
Sbjct: 296 YAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKS 355

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           MI RGI  + ++   +L    E G   E +++  E    GL    K
Sbjct: 356 MISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRK 401


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 3/241 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK  +  Y T++ G  +  + E ++L++SEMK  G   +      ++      G  SE  
Sbjct: 256 IKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE-- 313

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +L EM +  +    V++ +LI G   +G +  A  Y   M   G+ P    Y  LI GL
Sbjct: 314 -VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
             +N IE A  L  E+ ++ ++ D+  Y  LI+GY +H   K+A  L + M   G+    
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YTSL++ L R    +EA  LF +++G+G+ PD ++  +L+  H   GNMD A  L  E
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492

Query: 246 M 246
           M
Sbjct: 493 M 493



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 125/240 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GL +E+K E +++L+ E++E G+  ++V    L++ Y + G+  +A +L DEM+
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+ T  T+  LI  LC+    REA + F ++   G+ P++ +   L+DG C    ++
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA +L  EM    + PD   Y  L+ G      F+EA  L   M   G+  D  +Y +L+
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G S+ G  + A ++  EM+  G  P  +   +LLK   +    + A EL  EM   G++
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 38/286 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K  + D+  Y  I+  +C E +  +   +L EMKE GL  ++V    L+      G+
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGD 342

Query: 61  PSEALSLLDEM--------------------LDSRIEVT---------------VVTFCV 85
              A +  DEM                    ++++IE                  VT+ +
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+G C+ G  ++A      M   G+ P    YT+LI  LC+KN    A  LF+++  + 
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           M PD      L+DG+    +   A +L   M  + ++ D   Y  L+ GL   G  +EAR
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L  EM  RGI PD I   +L+  + ++G+   A  +++EM+  G 
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 32/248 (12%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           MKE G    T  C  ++    +      A     +M    I+  V TF ++I+ LCK G 
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR----DM----- 146
           +++A  + G M  FG+ P +  Y  L+ G   +  IE AR +  EM  +    DM     
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300

Query: 147 -----------------------IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
                                  +PD+ +Y  LI G   +   + A   ++ M + G+  
Sbjct: 301 ILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
               Y +L+ GL     ++ A +L  E+  +GI+ D +    L+  + + G+  +A  L 
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420

Query: 244 NEMMGRGL 251
           +EMM  G+
Sbjct: 421 DEMMTDGI 428



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 87/184 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I+ LC ++K  ++  L  ++   G+  + V+  TLMD +   G    A SLL EM 
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I    VT+  L+ GLC  G   EA +  G M   G+ P+   Y  LI G  KK   +
Sbjct: 495 MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + DEM      P    Y AL+ G  K++  + A  L   M   G+  + +++ S++
Sbjct: 555 HAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614

Query: 193 WGLS 196
             +S
Sbjct: 615 EAMS 618



 Score = 63.9 bits (154), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 63/121 (52%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +I  D   Y  ++ GLC E KFE+++ L+ EMK  G+  + +   TL+  Y K G+   A
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             + DEML      T++T+  L+ GL K+     A +    M   G+ PN + + ++I+ 
Sbjct: 557 FMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616

Query: 125 L 125
           +
Sbjct: 617 M 617


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 125/243 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC +     +  L  +M E G+  NT   T L++ + KA +  EA  L ++M 
Sbjct: 445 YSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMT 504

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S +E   VTF  +I+G C  G +R+A   + +M   GL P+   Y +LI GLC  +   
Sbjct: 505 ESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGAS 564

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A+    ++     + +  + TAL+ G+ +     EA ++ N M   G  LDL ++T +V
Sbjct: 565 KAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIV 624

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +   +    +++ VLF EM  +G+ PD +    ++  + + GNM +A+   +EM+  G L
Sbjct: 625 YAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHL 684

Query: 253 SGS 255
             +
Sbjct: 685 PNT 687



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 115/215 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  +C    F ++  L++EM + GL  N V    L+ +  K G   +AL +LD M 
Sbjct: 340 YNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMR 399

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  + +TV  +  LI+  CK   +  A+ +   M + GL PN A Y+ +I GLC+K  + 
Sbjct: 400 EKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLS 459

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  +M ++ +  +T  +TALI+G+ K +   EA  L N+MTE  ++ +   + +++
Sbjct: 460 GAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVI 519

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            G    G +++A  L+ +M+ RG+ PD     SL+
Sbjct: 520 EGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLI 554



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 123/233 (52%)

Query: 19  GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
           GL  + + E++  L  ++ E  +  N      L++   K G  SEA  L++EM D  +E 
Sbjct: 311 GLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEP 370

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
             VT+ +LI  LCK G++ +A+    RM + G+   V  Y +LI+  CKK+ ++ A    
Sbjct: 371 NEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFL 430

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
            EM +  + P+  +Y+ +I G  +      A+ L  +M E GV  +   +T+L+ G  + 
Sbjct: 431 SEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKA 490

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             + EA  LF++M    + P+E+   ++++ +   G++ +A +L ++MM RGL
Sbjct: 491 KKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGL 543



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 118/250 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ +   Y  +I  LC     +D+  +L  M+E G+        +L++   K  +
Sbjct: 363 MSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDD 422

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+  L EM++  +     ++  +I GLC+ G +  A++   +M + G+  N   +TA
Sbjct: 423 LDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTA 482

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A  LF++M + ++ P+   + A+I+GY      ++A  L ++M   G
Sbjct: 483 LINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRG 542

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y SL+ GL       +A+    ++     + ++    +LL      G + EA 
Sbjct: 543 LTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAY 602

Query: 241 ELQNEMMGRG 250
            + NEM   G
Sbjct: 603 HVWNEMAMWG 612



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +  K     Y  +I+GLC   +  ++  + + M   G+ A+ V C TL+  + +  E
Sbjct: 223 MQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEE 282

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +M       +      ++DGL K G V EA     ++ +  + PN+  Y A
Sbjct: 283 LDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNA 342

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++ +CK      A  L +EM  + + P+   Y  LI    K     +AL + +RM E G
Sbjct: 343 LLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKG 402

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V + +  Y SL+    +   L  A     EM+  G+ P+      ++     +G++  A+
Sbjct: 403 VRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAV 462

Query: 241 ELQNEMMGRGL 251
           EL  +M  +G+
Sbjct: 463 ELHRKMAEKGV 473



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 121/245 (49%), Gaps = 1/245 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K DL  +  I++    +   E S +L  EMKE G+  + V  T +++ Y K G   +AL+
Sbjct: 614 KLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALN 673

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
             DEM+        VT+  L++ LCKS  +  A      M      PN   +   +D   
Sbjct: 674 CWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFA 733

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            +  +E A++L+  M  +  + +  +   LI G+ K    +EA++L +R TE G   D  
Sbjct: 734 TEGNLETAKDLYFAM-LQGFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCI 792

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +Y++++  L + G + EA  L++EM+ +G+ PD +    L++     G  D+ + +  +M
Sbjct: 793 SYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDM 852

Query: 247 MGRGL 251
           + +G+
Sbjct: 853 VKKGV 857



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 118/246 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D      I++ L    +F  ++ L   M  +G+  +  + T  + AY +      A 
Sbjct: 158 IAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAK 217

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+  M D   +V+ V + VLI GLCK+  VREA+D    M   G+  +      L+ G 
Sbjct: 218 GLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGF 277

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   ++ A  +  +M +   +P     + ++DG  K    +EA  L  ++ E+ +  ++
Sbjct: 278 CRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNI 337

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            AY +L+  + + G   EA  L +EM  +G+ P+E+    L+    +RG MD+A+ + + 
Sbjct: 338 FAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDR 397

Query: 246 MMGRGL 251
           M  +G+
Sbjct: 398 MREKGV 403



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 36/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  +   +  +I G C   K +++  L ++M E+ L  N V    +++ Y   G+
Sbjct: 468 MAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGD 527

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLC----------------------------- 91
             +A  L D+M+   +     T+  LI GLC                             
Sbjct: 528 IRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTA 587

Query: 92  ------KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                 + G + EA   +  M  +G   ++  +T ++    K++  E++  LF EM ++ 
Sbjct: 588 LLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKG 647

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   +T +I+ Y K  +  +ALN  + M   G   +   YT+LV  L +  HL  A 
Sbjct: 648 VRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAE 707

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           +L  EM+    LP+       L      GN++ A +L   M+ +G L+
Sbjct: 708 LLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAML-QGFLA 754



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 114/240 (47%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y   I   C     + +K L++ M++ G   + V    L+    K     EA+ + + M
Sbjct: 199 VYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSM 258

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L   +    VT   L+ G C++  +  A++  G M   G  P+ A  + ++DGL KK  +
Sbjct: 259 LARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRV 318

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  L  ++ +  M+P+  AY AL++   K+  F EA  L N M++ G++ +   Y  L
Sbjct: 319 EEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAIL 378

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  L + G + +A  +   M  +G+        SL+    ++ ++D A+   +EM+  GL
Sbjct: 379 IHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGL 438



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 1/184 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC       ++LL  EM  +    N+      +D +   G    A  L   ML
Sbjct: 690 YTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAML 749

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   +V+   LI G CK G ++EAID   R  + G  P+   Y+ +I  LCKK  I 
Sbjct: 750 QGFL-ANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDIN 808

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L++EM  + + PD  AY  LI     H    + L +   M + GV  + + + +L 
Sbjct: 809 EAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRALF 868

Query: 193 WGLS 196
            G S
Sbjct: 869 VGTS 872



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P+    + ++  L K      AR+LFD M    ++ D   YTA I  Y +  +   A
Sbjct: 157 GIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L  RM + G  +    Y  L++GL +   ++EA  + + M+ RG+  DE+ C +L+  
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGSKN 257
                 +D A+E+  +M   G +    N
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEAN 304


>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
          Length = 346

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 106/200 (53%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC + + + +  LL  M+  G+ A+ V   TL+     A E  +A+ L+ EM 
Sbjct: 118 YTVLMRALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S IE  VV +  L+ G CKSG   +    F  M + G+ P+V +YT LID LCK    +
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + D M +R + P+   Y  LI+   K  S KEA+ +  +M+E GV  D+  Y +L+
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 193 WGLSRCGHLQEARVLFHEMI 212
            GLS    + EA  L  EM+
Sbjct: 298 KGLSDVLEMDEAMWLLEEMV 317



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 122/252 (48%), Gaps = 3/252 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMK---ENGLTANTVICTTLMDAYFKAGEPSEAL 65
           D   Y T++  LC     + +  LL  M          N V  T LM A        +A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRRADQAV 135

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL  M  + +   VVT+  LI GLC +  V +A++  G M + G+ PNV VY++L+ G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK    E    +F EM ++ + PD   YT LID   K    K+A  + + M   G++ ++
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+  + + G ++EA  +  +M  +G+ PD +   +L+K   +   MDEA+ L  E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 246 MMGRGLLSGSKN 257
           M+   ++  S+ 
Sbjct: 316 MVRGYIIQSSQQ 327



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 92/178 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++AD+  YGT+I GLC  ++ + +  L+ EM E+G+  N V+ ++L+  Y K+G 
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +  EM +  IE  VV +  LID LCK G  ++A      M   GL PNV  Y  
Sbjct: 201 WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           LI+ +CK+  ++ A  +  +M ++ + PD   Y  LI G        EA+ L   M  
Sbjct: 261 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318


>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
 gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
          Length = 599

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 126/240 (52%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  I+ G      F  +  +  +M   GL  + VI   L+ A+ KAG   +AL +L+ +
Sbjct: 229 IYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENI 288

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
             +R+  T+ T+  ++DG  K G +++A++ F R+   GL P V  Y +L+ GL K   +
Sbjct: 289 EANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQM 348

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E AR + +EM    ++P+  +YTAL +GY +    ++A  +  RM +  + +D+ AY +L
Sbjct: 349 ENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGAL 408

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    + G +Q A  +F ++   G+  + I   ++L     +G + +A +L N+M   G 
Sbjct: 409 LKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGF 468



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 126/246 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +  + +L LY T++ G       E        +K  GL+        ++  + KAG 
Sbjct: 148 MEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGN 207

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++AL +L+EM    +    + + +++DG  + G    A   +  M   GL P++ +Y  
Sbjct: 208 MAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNI 267

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   CK   +++A  + + +    ++P    YT+++DGY+K  + ++AL + +R+   G
Sbjct: 268 LVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAG 327

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   + +Y SL+ GL++   ++ AR++ +EM+  G++P+E    +L + +   G++++A 
Sbjct: 328 LRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAF 387

Query: 241 ELQNEM 246
            +   M
Sbjct: 388 GMFQRM 393



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG I+           +  +L EM ++G++ N +I   +MD Y + G+ + A  + ++M+
Sbjct: 195 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 254

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + ++  +V + +L+   CK+G + +A+     +    L P +  YT+++DG  K   I+
Sbjct: 255 SAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQ 314

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  +FD +    + P   +Y +L+ G  K    + A  + N M   GV  +  +YT+L 
Sbjct: 315 KALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALT 374

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G +R G +++A  +F  M    +  D +   +LLK   + G M  A E+  ++   GL
Sbjct: 375 EGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGL 433



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 115/241 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K D+ +Y  ++   C   + + +  +L  ++ N L       T+++D Y K G 
Sbjct: 253 MVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGN 312

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + D +  + +   VV++  L+ GL K+  +  A      M   G+ PN   YTA
Sbjct: 313 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTA 372

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L +G  +   +E+A  +F  M K ++  D  AY AL+    K  + + A  +  ++T+ G
Sbjct: 373 LTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAG 432

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +++ G +R G L +AR L ++M   G   D I   S +K  +  G+ +E  
Sbjct: 433 LKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVT 492

Query: 241 E 241
           E
Sbjct: 493 E 493



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 108/227 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K   ++  +  Y +++ GL    + E+++L+L+EM  NG+  N    T L + Y +AG+
Sbjct: 323 IKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGD 382

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +   M    + + +V +  L+   CKSG ++ A + F ++ D GL  N   Y  
Sbjct: 383 VEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCT 442

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG  +K  + +AR+L ++M K     DT  YT+ I    +    +E       M E  
Sbjct: 443 MLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKK 502

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           ++++   YT+L+ G        +A   + +    G+  D  L   LL
Sbjct: 503 LEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLL 549



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 113/254 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ +  ++ +II G       E ++    + K   L    ++  +++ AY +AG 
Sbjct: 78  MLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGN 137

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL +M +   +  +  +  +++G  +     + + +F R+   GL P  A Y  
Sbjct: 138 METVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGC 197

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    K   + +A ++ +EM K  + P+   Y  ++DGY +   F  A  +   M   G
Sbjct: 198 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 257

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  LV    + G + +A  +   +    +LP      S+L  + + GN+ +A+
Sbjct: 258 LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKAL 317

Query: 241 ELQNEMMGRGLLSG 254
           E+ + +   GL  G
Sbjct: 318 EVFDRIKTAGLRPG 331



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 104/223 (46%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           ++     M+ + +  N  I T+L+ AY +A +   A++  +EML   I++    FC +I 
Sbjct: 36  ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 95

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           G   +G    A  +F +     L P   VY +++   C+   +E    L  +M +     
Sbjct: 96  GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 155

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   YT +++G+ +    ++ L+  +R+   G+      Y  +V   ++ G++ +A  + 
Sbjct: 156 NLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDIL 215

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM   G+ P++++   ++  +   G+   A ++  +M+  GL
Sbjct: 216 EEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGL 258



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/240 (19%), Positives = 104/240 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +IK ++ +Y ++I         E +     EM   G+  N  +  +++  Y  AG 
Sbjct: 43  MRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGN 102

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A    ++     +    + +  ++   C++G +        +M + G   N+ +YT 
Sbjct: 103 NEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTT 162

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G  +    E+  + F  +    + P    Y  ++  + K  +  +AL++   M + G
Sbjct: 163 VLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHG 222

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y  ++ G +R G    A  ++ +M+  G+ PD ++   L+    + G MD+A+
Sbjct: 223 VSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKAL 282



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 90/201 (44%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+D Y + G+   A +  + M  S I+  V  +  LI    ++  +  A+     M   G
Sbjct: 23  LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 82

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           +  N AV+ ++I G       E A + F++    +++P    Y +++  Y +  + +   
Sbjct: 83  IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 142

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L  +M E G   +L  YT+++ G +     ++    FH +   G+ P       ++K  
Sbjct: 143 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLF 202

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + GNM +A+++  EM   G+
Sbjct: 203 TKAGNMAKALDILEEMDKHGV 223



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 73/173 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +N+  D+  YG ++   C     + +  +  ++ + GL  N +   T++D + + GE
Sbjct: 393 MKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGE 452

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL++M      +  + +   I    +SG   E  +    M +  L  N   YT 
Sbjct: 453 LSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTT 512

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           LI G       ++A + +++     +  D+     L+ G +   S    L  K
Sbjct: 513 LIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGLISCASQNSTLGEK 565



 Score = 51.2 bits (121), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 61/139 (43%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P +  Y  L+D   +      AR  F+ M    + P+   YT+LI  Y +    + A+  
Sbjct: 15  PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 74

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M   G+ L+   + S++ G +  G+ + A   F +     ++P  I+  S+++ + +
Sbjct: 75  TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 134

Query: 233 RGNMDEAIELQNEMMGRGL 251
            GNM+    L  +M   G 
Sbjct: 135 AGNMETVEALLAQMEEEGF 153


>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 598

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 122/239 (51%), Gaps = 1/239 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  L G ++W   I  + + S+ LL++++ N +  N V+   L +   +  +  +A+ L 
Sbjct: 105 DNRLLGFLVWSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLF 164

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            E++  R +    T  +L+ GLC++G + EA      +  FG  P+V  Y  LI GLC+ 
Sbjct: 165 RELIRLRYKPVTYTVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRI 224

Query: 129 NCIERARNLFDEMP-KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           N ++RAR+L  E+    +  PD  +YT +I GY K    +E   L   M   G   +   
Sbjct: 225 NEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFT 284

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           + +L+ G  + G +  A  L+ +M+ +G +PD     SL+  ++  G + +A+++ ++M
Sbjct: 285 FNALIGGFGKLGDMASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKM 343



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 108/213 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y TII G C  SK E+  LL  EM  +G   NT     L+  + K G+ + AL+L 
Sbjct: 246 DVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALY 305

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++ML       V TF  LI+G  + G V +A+D + +M D  +   +  ++ L+ GLC  
Sbjct: 306 EKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNN 365

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N + +AR++   + + D++P    Y  +IDGY K  +  EA  +   M       D   +
Sbjct: 366 NRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTF 425

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           T L+ G    G + EA  +FH+M+  G  PDEI
Sbjct: 426 TILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEI 458



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 113/229 (49%), Gaps = 1/229 (0%)

Query: 19  GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM-LDSRIE 77
           GLC   + +++  LL++++  G   + +   TL+    +  E   A SLL E+ L+    
Sbjct: 185 GLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFA 244

Query: 78  VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNL 137
             VV++  +I G CK   + E    FG M   G  PN   + ALI G  K   +  A  L
Sbjct: 245 PDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALAL 304

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSR 197
           +++M  +  +PD   +T+LI+GY +     +A+++ ++M +  +   L  ++ LV GL  
Sbjct: 305 YEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCN 364

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
              L +AR +   +    I+P   +   ++  + + GN+DEA ++  EM
Sbjct: 365 NNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEM 413



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%), Gaps = 1/217 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  N+  +  +Y  +   L  ++K  D+ +L  E+        T     LM    +AGE
Sbjct: 132 VQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGE 191

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYT 119
             EA  LL+++        V+T+  LI GLC+   V  A      +   G   P+V  YT
Sbjct: 192 IDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYT 251

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I G CK + +E    LF EM +    P+T  + ALI G+ K      AL L  +M   
Sbjct: 252 TIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQ 311

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           G   D+  +TSL+ G  R G + +A  ++H+M  + I
Sbjct: 312 GCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNI 348



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 1/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC  +    +K++   M+ +G   +  +   L+ +Y   G    +  LL ++ 
Sbjct: 74  YSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLADVQ 133

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + + V  V +  L + L +   V +A+  F  +      P       L+ GLC+   I+
Sbjct: 134 CNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEID 193

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG-VDLDLNAYTSL 191
            A  L +++     +PD   Y  LI G  +      A +L   +   G    D+ +YT++
Sbjct: 194 EAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTI 253

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + G  +   ++E  +LF EMI  G  P+     +L+    + G+M  A+ L  +M+ +G
Sbjct: 254 ISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQG 312



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 58/114 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KNI A L  +  ++ GLC  ++   ++ +L  + E+ +     I   ++D Y K+G 
Sbjct: 343 MNDKNIGATLYTFSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGN 402

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
             EA  ++ EM  +R +   +TF +LI G C  G + EAI  F +M   G  P+
Sbjct: 403 VDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGIFHKMLAVGCAPD 456



 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 54/135 (40%)

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y+ L+  LC+ N    A+ ++D M     IPD      L+  Y        +  L   + 
Sbjct: 74  YSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLADVQ 133

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
              V ++   Y  L   L R   + +A VLF E+I     P       L++     G +D
Sbjct: 134 CNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEID 193

Query: 238 EAIELQNEMMGRGLL 252
           EA  L N++   G L
Sbjct: 194 EAFRLLNDLRSFGCL 208


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  120 bits (302), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 118/244 (48%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D+  Y T+I G  ++     +  L+ EM+ NG   N+     L+  + K     +AL 
Sbjct: 425 KHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALE 484

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +   ML   +++ + T  ++ D   + G   EA+     + D G+ PN   Y  +I  LC
Sbjct: 485 VFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLC 544

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+   E+A  +   M K ++ P    Y  LIDGY K  +  +AL L  +M +VG+   + 
Sbjct: 545 KEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIV 604

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YT L+   S    +QEA  LF EMI +G++PDEI+   ++    + G+M  A  L  EM
Sbjct: 605 TYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEM 664

Query: 247 MGRG 250
              G
Sbjct: 665 SQWG 668



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 106/207 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC E K E +  +L  M +N +    +   TL+D Y K   P++AL L  +ML
Sbjct: 536 YNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKML 595

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  ++VT+ +LI+       ++EA   F  M   GL P+  ++T +I G CK   ++
Sbjct: 596 KVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMK 655

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L++EM +    P+   YT LIDGY K +   +A  L N+M    V  D   YT+L+
Sbjct: 656 SAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALI 715

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
           +G    G+    R +F+EM   G+ P+
Sbjct: 716 FGYQSLGYSDRVREMFNEMKENGVFPN 742



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 113/243 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG  I GLC     E +  L+ +++      N+     ++  + + GE  EA  LL++M 
Sbjct: 291 YGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMR 350

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I  T  ++ +LIDGLCK G V +A+D    M    + P++  Y++L DGLCK    E
Sbjct: 351 SHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTE 410

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            + ++F  +       D  +Y  LI+G++       A  L + M   G   +   +  L+
Sbjct: 411 ISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLI 470

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   L +A  +F  M+  G+  +   C  +  +    G+  EA++L NE+   G++
Sbjct: 471 HGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIV 530

Query: 253 SGS 255
             S
Sbjct: 531 PNS 533



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 112/230 (48%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E  F ++  L++E+++ G+  N+     ++    K  +  +A  +L  ML + +    + 
Sbjct: 511 EGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIH 570

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           +  LIDG  K     +A+  + +M   G+ P++  YT LI+    ++ ++ A  LF EM 
Sbjct: 571 YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMI 630

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           K+ ++PD   +T +I G+ K    K A  L   M++ G   ++  YT L+ G  +   + 
Sbjct: 631 KKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMD 690

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +A  LF++M    + PD +   +L+  +   G  D   E+ NEM   G+ 
Sbjct: 691 KADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVF 740



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 108/234 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C   + + +  + + M + G+  N   C  + D + + G   EAL L++E+ 
Sbjct: 466 FNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQ 525

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I     T+ ++I  LCK     +A +    M    + P    Y  LIDG  K++   
Sbjct: 526 DLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPT 585

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L+ +M K  + P    YT LI+ +      +EA  L   M + G+  D   +T ++
Sbjct: 586 KALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCII 645

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            G  + G ++ A  L+ EM   G  P+ +    L+  +++   MD+A  L N+M
Sbjct: 646 AGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKM 699



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 88/179 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G   +S    + LL ++M + G+  + V  T L++ +    +  EA  L  EM+
Sbjct: 571 YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMI 630

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +    + F  +I G CK G ++ A   +  M  +G  PNV  YT LIDG  K   ++
Sbjct: 631 KKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMD 690

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +A  LF++M + ++ PD   YTALI GY           + N M E GV  +  AY +L
Sbjct: 691 KADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 106/220 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L EM+ NG +   V     +    +AG    AL L+ ++      +    +  +I   C
Sbjct: 275 VLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFC 334

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           ++G + EA +    M   G+ P    Y+ LIDGLCKK  +E+A +L +EM + ++ P   
Sbjct: 335 RNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLV 394

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y++L DG  K    + +L++ + +   G   D+ +Y +L+ G      +  A  L HEM
Sbjct: 395 TYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEM 454

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              G +P+      L+    +R  +D+A+E+   M+  G+
Sbjct: 455 RMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGV 494



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 125/310 (40%), Gaps = 70/310 (22%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I   C   +  ++  LL +M+ +G++      + L+D   K G+  +AL L++EM+
Sbjct: 326 YNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMV 385

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLV----------------REAIDYFGRMPDFGLH---- 112
            S ++ ++VT+  L DGLCKSGL                  + I Y   +  F L     
Sbjct: 386 QSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMG 445

Query: 113 ---------------PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                          PN   +  LI G CK+  +++A  +F  M K  +  +      + 
Sbjct: 446 SACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMA 505

Query: 158 DGYLKHESFKEALNLKNRMTEVG-----------------------------VDLDLNA- 187
           D + +   F EAL L N + ++G                             V L  N  
Sbjct: 506 DEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVF 565

Query: 188 -----YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
                Y +L+ G ++  +  +A +L+ +M+  GI P  +    L+     R  M EA  L
Sbjct: 566 PCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYL 625

Query: 243 QNEMMGRGLL 252
             EM+ +GL+
Sbjct: 626 FKEMIKKGLV 635



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 11/230 (4%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLS------EMKENGLTANTVICTTLMDAYFKAGEPS 62
           D  + G+II    +   F ++ +L+       + +  GL  N + C  L++ + +A +  
Sbjct: 171 DAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTE 230

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL-----VREAIDYFGRMPDFGLHPNVAV 117
              SL +E+ DS     V T+ ++++  CK        + +A +    M   G  P V  
Sbjct: 231 FIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVT 290

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           Y A I GLC+  C+E A  L  ++  R+   ++  Y A+I  + ++    EA  L   M 
Sbjct: 291 YGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMR 350

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
             G+     +Y+ L+ GL + G +++A  L  EM+   + P  +   SL 
Sbjct: 351 SHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLF 400



 Score = 60.5 bits (145), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 27/266 (10%)

Query: 10  LPLYGTIIWGLCIESKFEDS-------------KLLLSEMKENGLTANTVICTTLMDAYF 56
           L ++ T+ W L   + F  +             K+++  +   GL     I    + +Y+
Sbjct: 92  LTVFKTLNWKLATHTNFFKAVSFHGFSHSIYAFKIIIHVLASAGLQMEVQIFLRDIISYY 151

Query: 57  KAG--EPSEALS-LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
           K    + SE  S LLD   D+ +  +++   VLI    ++ ++ +A D F +   FGL  
Sbjct: 152 KEVNLDVSELFSTLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLEL 211

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           N+     L++   + N  E  R+LF+E+      P+   YT +++ Y K  SF + +++ 
Sbjct: 212 NILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCK-GSFGKNIDIV 270

Query: 174 NRMTEVGVDLDLN-------AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
            + TEV  ++++N        Y + + GL R G ++ A  L  ++  R   P    C + 
Sbjct: 271 -KATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRN-QPLNSYCYNA 328

Query: 227 LKKHYER-GNMDEAIELQNEMMGRGL 251
           +   + R G + EA EL  +M   G+
Sbjct: 329 VIHEFCRNGELHEAFELLEDMRSHGI 354



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 51/121 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D  ++  II G C     + +  L  EM + G + N V  T L+D YFK   
Sbjct: 629 MIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKR 688

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L ++M    +    +T+  LI G    G      + F  M + G+ PN   Y  
Sbjct: 689 MDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYAT 748

Query: 121 L 121
           L
Sbjct: 749 L 749


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 107/201 (53%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           LM    ++G+ + A ++ DEML   ++ TVVTF  L+ G+CK+  +  A    G M   G
Sbjct: 248 LMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAG 307

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+V  Y A I GLCK   I+ A  +F+EM +R + P+T   T LID + K       L
Sbjct: 308 IAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGL 367

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L+  M   GV  DL AY +LV G  R   ++ A  +  EM   G+ PD++   +L+   
Sbjct: 368 ELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGC 427

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + G +D A+E++ EM   G+
Sbjct: 428 CKEGELDTAMEMKQEMSDEGV 448



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  YG  I GLC   + +D+  +  EM E GL  NTV+ TTL+DA+ K G+
Sbjct: 303 MAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 362

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +  L L  EM    ++  +V +  L++G C+   ++ A D    M   GL P+   YT 
Sbjct: 363 VTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTT 422

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  ++ A  +  EM    +  D   YTALI G  K     +A  +   M E G
Sbjct: 423 LIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAG 482

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   YT ++    + G ++       EM  +G  P  +    ++      G M  A 
Sbjct: 483 LQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNAD 542

Query: 241 ELQNEMMGRGL 251
            L N M+  G+
Sbjct: 543 MLLNAMLNIGV 553



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 116/247 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++  +  + T++ G+C  S   ++  L   M + G+  +       +    K G   +
Sbjct: 271 RGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQD 330

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ + +EM +  +    V    LID  CK G V   ++    M   G+  ++  Y AL++
Sbjct: 331 AMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVN 390

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C+   ++ A ++ +EM K  + PD   YT LIDG  K      A+ +K  M++ GV L
Sbjct: 391 GFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVAL 450

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D   YT+L+ GLS+ G   +A  +  EM+  G+ PD      ++    + G++    +  
Sbjct: 451 DDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHL 510

Query: 244 NEMMGRG 250
            EM  +G
Sbjct: 511 KEMQNKG 517



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +KADL  Y  ++ G C     + +  ++ EM+++GL  + V  TTL+D   K GE
Sbjct: 373 MATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGE 432

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  EM D  + +  VT+  LI GL K+G   +A      M + GL P+   YT 
Sbjct: 433 LDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTM 492

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID  CK   ++       EM  +   P    Y  +++G+      K A  L N M  +G
Sbjct: 493 VIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIG 552

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVL 207
           V  +   Y  L+ G  + G +++   L
Sbjct: 553 VCPNDITYNILLDGHCKHGKVRDTEEL 579



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 3/205 (1%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           + + +   Y   G   +  SLL   L   I V +  +  L++ L     V EA  ++  +
Sbjct: 177 LVSAVAKVYADEGLLPDGCSLLLLALRRGIRVPMPAWSDLMNRLPS---VPEAYAFYLHL 233

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            D G+ P    +  L+  + +   +  ARN+FDEM +R + P    +  L+ G  K    
Sbjct: 234 LDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDL 293

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
             A  L+  M + G+  D+  Y + + GL + G +Q+A  +F EM  RG+ P+ ++  +L
Sbjct: 294 NNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTL 353

Query: 227 LKKHYERGNMDEAIELQNEMMGRGL 251
           +  H + G++   +EL+ EM  RG+
Sbjct: 354 IDAHCKEGDVTAGLELRWEMATRGV 378


>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 418

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 110/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +   ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +   M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 117/221 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ +  M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 101/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+   M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKLMLSQSL 272


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 117/266 (43%), Gaps = 35/266 (13%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  LC + K E     LS+++E G+  + V   TL+ AY   G   EA  L++ M    
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
               V T+  +I+GLCK G    A + F  M   GL P+   Y +L+   CKK  +    
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360

Query: 136 NLFDEMPKRD-----------------------------------MIPDTTAYTALIDGY 160
            +F +M  RD                                   +IPD   YT LI GY
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            +      A+NL+N M + G  +D+  Y +++ GL +   L EA  LF+EM  R + PD 
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480

Query: 221 ILCISLLKKHYERGNMDEAIELQNEM 246
                L+  H + GN+  A+EL  +M
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKM 506



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 134/286 (46%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK     +  Y T+I GLC   K+E +K + +EM  +GL+ ++    +L+    K G+
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   +  +M    +   +V F  ++    +SG + +A+ YF  + + GL P+  +YT 
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415

Query: 121 LIDGLCKKNCIERARN-----------------------------------LFDEMPKRD 145
           LI G C+K  I  A N                                   LF+EM +R 
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD+   T LIDG+ K  + + A+ L  +M E  + LD+  Y +L+ G  + G +  A+
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            ++ +M+ + ILP  I    L+     +G++ EA  + +EM+ + +
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 2/238 (0%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I G C     +++  L  +MKE  +  + V   TL+D + K G+   A  +  +M+   
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I  T +++ +L++ LC  G + EA   +  M    + P V +  ++I G C+        
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV--GVDLDLNAYTSLVW 193
           +  ++M     +PD  +Y  LI G+++ E+  +A  L  +M E   G+  D+  Y S++ 
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  R   ++EA V+  +MI RG+ PD      ++     + N+ EA  + +EM+ RG 
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 112/219 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  E+  +G+  N      +++A  K G+  +  + L ++ +  +   +VT+  LI    
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             GL+ EA +    MP  G  P V  Y  +I+GLCK    ERA+ +F EM +  + PD+T
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y +L+    K     E   + + M    V  DL  ++S++   +R G+L +A + F+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              G++PD ++   L++ +  +G +  A+ L+NEM+ +G
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 105/228 (46%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K  ++    + ++  G T +   C  L+ +  + G    A  +  E+  S + + V T  
Sbjct: 180 KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 239

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           ++++ LCK G + +   +  ++ + G++P++  Y  LI     K  +E A  L + MP +
Sbjct: 240 IMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK 299

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              P    Y  +I+G  KH  ++ A  +   M   G+  D   Y SL+    + G + E 
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +F +M  R ++PD +   S++      GN+D+A+   N +   GL+
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 108/238 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  +Y  +I G C +     +  L +EM + G   + V   T++    K     EA  L 
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM +  +     T  +LIDG CK G ++ A++ F +M +  +  +V  Y  L+DG  K 
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I+ A+ ++ +M  ++++P   +Y+ L++         EA  + + M    +   +   
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            S++ G  R G+  +      +MI  G +PD I   +L+       NM +A  L  +M
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 87/174 (50%), Gaps = 2/174 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC +    ++  +  EM    +    +IC +++  Y ++G  S+  S L++M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD--FGLHPNVAVYTALIDGLCKKNC 130
                   +++  LI G  +   + +A     +M +   GL P+V  Y +++ G C++N 
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           ++ A  +  +M +R + PD + YT +I+G++  ++  EA  + + M + G   D
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 94/210 (44%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           +N  +   L+  Y +A +  EA      +      V++     LI  L + G V  A   
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  +   G+  NV     +++ LCK   +E+      ++ ++ + PD   Y  LI  Y  
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               +EA  L N M   G    +  Y +++ GL + G  + A+ +F EM+  G+ PD   
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             SLL +  ++G++ E  ++ ++M  R ++
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVV 372



 Score = 47.0 bits (110), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 62/141 (43%)

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           N +V+  LI    +   +  A   F  +  +       A  ALI   ++    + A  + 
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
             ++  GV +++     +V  L + G +++      ++  +G+ PD +   +L+  +  +
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283

Query: 234 GNMDEAIELQNEMMGRGLLSG 254
           G M+EA EL N M G+G   G
Sbjct: 284 GLMEEAFELMNAMPGKGFSPG 304


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 120/242 (49%), Gaps = 1/242 (0%)

Query: 11  PLYGTIIWGLCIESKF-EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           PL+  ++  +C ESK   +S  L   MK++G+  +       +++        + L L  
Sbjct: 112 PLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFS 171

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           E+++S +      +   I    K G ++ AI+    M   G+ P V VY  +I GLCK+ 
Sbjct: 172 EIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEK 231

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++ A  LFDEM  R + P+   Y  LIDGY K    +EA N++ RM    V+  +  + 
Sbjct: 232 RMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFN 291

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           SL+ GL R   ++EA+ +  EM   G +PD     +L   H + GN+D +I L  E + +
Sbjct: 292 SLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRK 351

Query: 250 GL 251
           G+
Sbjct: 352 GV 353



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 34/285 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ +   Y +++   C     E+++  + +M E G+  N     TL+D Y ++  
Sbjct: 418 MEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCL 477

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 +L+EM    ++  V+++  LI+ LCK   + EA    G M   G+ PN  +Y  
Sbjct: 478 FDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNM 537

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A   FDEM  R+++P    Y  LI+G  K     EA NL + +T  G
Sbjct: 538 LIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKG 597

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA----------------------------------RV 206
           +  D+  Y SL+ G S  G++Q+A                                    
Sbjct: 598 LSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEK 657

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           ++ EM+   ++PD ++  +L+  + E G++ +A  L + M  +G+
Sbjct: 658 IYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGI 702



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 127/256 (49%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K ++  YG +I  LC ++   +++++L +M   G+  N  I   L+D    AG+
Sbjct: 488 MEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGK 547

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A    DEM+   I  T+VT+ +LI+GLCK G V EA +    +   GL  +V  Y +
Sbjct: 548 LKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNS 607

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G      +++A  L++ M K  + P    Y  LI G  K E       +   M ++ 
Sbjct: 608 LISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGK-EGLVLVEKIYQEMLQMN 666

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +L+      G +Q+A  L   M  +GI PD++    L+  H++ G M +  
Sbjct: 667 LVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVK 726

Query: 241 ELQNEMMGRGLLSGSK 256
            L N+M  RGL+  ++
Sbjct: 727 NLVNDMKIRGLIPKTE 742



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 35/282 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D  +YG  I         + +  L++ MK  G++    +   ++    K     +A 
Sbjct: 178 LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAE 237

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L DEMLD R+    +T+  LIDG CK G + EA +   RM    + P +  + +L++GL
Sbjct: 238 KLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGL 297

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD-LD 184
           C+   +E A+ + +EM     +PD   YT L DG+LK  +   ++ L       GV  LD
Sbjct: 298 CRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILD 357

Query: 185 ------LNA----------------------------YTSLVWGLSRCGHLQEARVLFHE 210
                 LNA                            + ++V G  + G + +A     +
Sbjct: 358 YTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEK 417

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           M   G+ P+ +   SL+KK  E  NM+EA +   +M+ +G+L
Sbjct: 418 MEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVL 459



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 111/227 (48%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           ++ED+  L SE+ E+GL  +  +    + A  K G+   A+ L+  M    +   V  + 
Sbjct: 162 RYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYN 221

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           V+I GLCK   +++A   F  M D  + PN   Y  LIDG CK   +E A N+ + M   
Sbjct: 222 VVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVE 281

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           ++ P    + +L++G  + +  +EA  +   M   G   D   YT+L  G  +CG++  +
Sbjct: 282 NVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDAS 341

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L  E + +G+   +  C  LL    + GNM++A E+  + +  GL
Sbjct: 342 ITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGL 388



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 130/287 (45%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +N++  +  + +++ GLC     E+++ +L EM+  G   +    TTL D + K G 
Sbjct: 278 MKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGN 337

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID---------------YFG- 104
              +++L +E +   +++   T  +L++ LCK G + +A +               +F  
Sbjct: 338 VDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNT 397

Query: 105 -------------------RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                              +M   GL PN   Y +L+   C+   +E A     +M ++ 
Sbjct: 398 IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+   Y  LIDGY +   F     +   M + G+  ++ +Y  L+  L +  ++ EA 
Sbjct: 458 VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAE 517

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           V+  +M+ RG++P+  +   L+      G + +A    +EM+ R ++
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIV 564



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 115/236 (48%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  LC E   E ++ +L +  ENGL    V   T+++ Y + G+ ++A + +++M    
Sbjct: 363 LLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG 422

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           +    VT+  L+   C+   + EA     +M + G+ PNV  Y  LIDG  +    +R  
Sbjct: 423 LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCF 482

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            + +EM K+ + P+  +Y  LI+   K  +  EA  +   M   GV  +   Y  L+ G 
Sbjct: 483 QILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGS 542

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              G L++A   F EM+ R I+P  +    L+    ++G + EA  L +E+  +GL
Sbjct: 543 CIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGL 598



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 106/240 (44%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            + TI+ G C       +   + +M+  GL  N V   +L+  + +     EA   + +M
Sbjct: 394 FFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM 453

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           ++  +   V T+  LIDG  +S L          M   GL PNV  Y  LI+ LCK   I
Sbjct: 454 VEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANI 513

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  +  +M  R ++P+   Y  LIDG       K+A    + M    +   L  Y  L
Sbjct: 514 LEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNIL 573

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL + G + EA  L  E+  +G+  D I   SL+  +   GN+ +A+EL   M   G+
Sbjct: 574 INGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGI 633



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 114/251 (45%), Gaps = 3/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I   L  Y  +I GLC + K  +++ L SE+   GL+ + +   +L+  Y  AG 
Sbjct: 558 MVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGN 617

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV-REAIDYFGRMPDFGLHPNVAVYT 119
             +AL L + M  S I+ T+ T+  LI G  K GLV  E I  +  M    L P+  +Y 
Sbjct: 618 VQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKI--YQEMLQMNLVPDRVIYN 675

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ALI    +   +++A +L   M  + + PD   Y  LI G+ K     +  NL N M   
Sbjct: 676 ALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIR 735

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+      Y  L+ G  +      A V + EM   G  P   +C +L+    E G   +A
Sbjct: 736 GLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDA 795

Query: 240 IELQNEMMGRG 250
             + +EM  +G
Sbjct: 796 DVICSEMNMKG 806


>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 123/242 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G       ++   L S M  +G   +    + L++   K G+  EA  L +EML
Sbjct: 174 FNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEML 233

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+ +    VTF  LI G CK+  V  A++ + +M   GL P++  Y  LI GLCKK  ++
Sbjct: 234 DNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELK 293

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +  +L DEM    + PD  +YT LIDG  K    + AL L+N+M +  + LD  AYT+L+
Sbjct: 294 QVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALI 353

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L R G   +A  +  EM+  G+ PD      ++ +  ++ +   A +L  EM   G L
Sbjct: 354 SCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPL 413

Query: 253 SG 254
            G
Sbjct: 414 PG 415



 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 115/213 (53%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+ E G  A+      LM  + K GE   A S+ D +    +  +VV+F  LI+G  K G
Sbjct: 126 EVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLG 185

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + E       M   G  P+V  Y+ LI+GLCK+  ++ A  LF+EM    ++P+   +T
Sbjct: 186 DLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFT 245

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LI G+ K+E    A+ +  +M   G+  DL  Y +L++GL + G L++   L  EMI  
Sbjct: 246 TLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN 305

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           G+ PD+I   +L+    + G+++ A+EL+N+M+
Sbjct: 306 GLKPDKISYTTLIDGSCKEGDLEIALELRNKMI 338



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 106/218 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D+  Y  +I GLC E K +++  L +EM +NGL  N V  TTL+  + K  +
Sbjct: 197 MHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEK 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++  D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A  L ++M +  +  D  AYTALI    +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D   YT ++    +    + A  L  EM   G LP
Sbjct: 377 LKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLP 414



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 106/209 (50%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + LM AY ++G   +A+         +I V   T   +++ L +    +   D+
Sbjct: 64  SDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK+  +  A+++FD + K  + P   ++  LI+GY+K
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   G   D+  Y+ L+ GL + G L EA  LF+EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H +   +D A+E+  +M+ +GL
Sbjct: 244 FTTLIHGHCKNEKVDLAMEIYKQMLSQGL 272


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 129/246 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  +L  Y  ++   C + + +D+  L  EM+E G++ N V   TL+    +  +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  ++D+M    I   ++T+  LIDG C  G + +A+     +   GL P++  Y  
Sbjct: 319 ANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CKK     A  +  EM +R + P    YT LID + + ++ ++A+ L++ M E+G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELG 438

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D++ Y+ L+ G    G + EA  LF  M+ + + P++++  +++  + + G+   A+
Sbjct: 439 LTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRAL 498

Query: 241 ELQNEM 246
            L  EM
Sbjct: 499 RLFREM 504



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 126/248 (50%), Gaps = 2/248 (0%)

Query: 6   IKADLPLY--GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           IK DL +Y  G +I G C   + E S  LL E++E G + N VI TTL+D   K GE  +
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L  EM    +     T+ VLI GL K+G+ ++  + + +M + G+ PN+  Y  +++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             CK    + A  LFDEM +R +  +   Y  LI G  +     EA  + ++M   G++ 
Sbjct: 277 QHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINP 336

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +L  Y +L+ G    G L +A  L  ++  RG+ P  +    L+    ++G+   A ++ 
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV 396

Query: 244 NEMMGRGL 251
            EM  RG+
Sbjct: 397 KEMEERGI 404



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 115/243 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y T+I G C   + E +K L  EM + GL AN    T L+   FK G   +   + 
Sbjct: 197 NVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMY 256

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++M +  +   + T+  +++  CK G  ++A   F  M + G+  N+  Y  LI GLC++
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCRE 316

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A  + D+M    + P+   Y  LIDG+       +AL+L   +   G+   L  Y
Sbjct: 317 MKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             LV G  + G    A  +  EM  RGI P +I    L+       NM++AI+L++ M  
Sbjct: 377 NILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEE 436

Query: 249 RGL 251
            GL
Sbjct: 437 LGL 439



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 8/231 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  ++  Y T+I GLC E K  ++  ++ +MK +G+  N +   TL+D +   G+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGK 353

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +ALSL  ++    +  ++VT+ +L+ G CK G    A      M + G+ P+   YT 
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTI 413

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   + + +E+A  L   M +  + PD   Y+ LI G+       EA  L   M    
Sbjct: 414 LIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKK 473

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD--------EILC 223
           ++ +   Y ++V G  + G    A  LF EM  + + P+        E+LC
Sbjct: 474 LEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524



 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 34/201 (16%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHP------------------------------- 113
           V+I+   +S  +  +I YF  M D G  P                               
Sbjct: 99  VMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK 158

Query: 114 ---NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
              +V  +  +I G C+   IE++ +L  E+ +    P+   YT LIDG  K    ++A 
Sbjct: 159 VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAK 218

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           +L   M + G+  +   YT L+ GL + G  ++   ++ +M   G+ P+      ++ +H
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQH 278

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + G   +A +L +EM  RG+
Sbjct: 279 CKDGRTKDAFKLFDEMRERGV 299



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 90/192 (46%), Gaps = 16/192 (8%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S A SLL +++  +I+    T   L+  + +S    E  +   R+           Y  +
Sbjct: 56  SHAQSLLLQVISGKIQSQFFTSSSLLHYVTES----ETSETKSRL-----------YEVM 100

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+   +   ++ + + F+EM  +  +P +  +  L+   +   SF +     N  +++ V
Sbjct: 101 INAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-SKIKV 159

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           DLD+ ++  ++ G    G ++++  L  E+   G  P+ ++  +L+    +RG +++A +
Sbjct: 160 DLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKD 219

Query: 242 LQNEMMGRGLLS 253
           L  EM   GL++
Sbjct: 220 LFFEMGKFGLVA 231


>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 860

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 126/247 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K D   Y T++  L    +F     LL EM  +G   NTV    L+ +Y +A   +EA+
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           ++ ++M ++  +   VT+C LID   K+G +  A+D + RM   GL P+   Y+ +I+ L
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +  A  LF EM  +   P+   Y  ++D + K  +++ AL L   M   G + D 
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDK 539

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+ ++  L  CG+L+EA  +F EM  +  +PDE +   L+    + GN+++A +    
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599

Query: 246 MMGRGLL 252
           M+  GLL
Sbjct: 600 MLHAGLL 606



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 108/252 (42%), Gaps = 37/252 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAG 59
           M+    K D   Y T+I  +  ++ F D  + +   M+  GL+ +T   + +++   KAG
Sbjct: 425 MQEAGCKPDRVTYCTLI-DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
               A  L  EM+D      +VT+ +++D   K+   + A+  +  M + G  P+   Y+
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYS 543

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +++ L     +E A  +F EM +++ IPD   Y  L+D                     
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD--------------------- 582

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
                       +WG  + G++++A   +  M+  G+LP+   C SLL        + EA
Sbjct: 583 ------------LWG--KAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEA 628

Query: 240 IELQNEMMGRGL 251
            EL   M+  GL
Sbjct: 629 YELLQNMLALGL 640



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 81/192 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D   Y  II  L        +  L  EM + G T N V    +MD + KA  
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L  +M ++  E   VT+ ++++ L   G + EA   F  M      P+  VY  
Sbjct: 520 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D   K   +E+A   +  M    ++P+     +L+  +L+     EA  L   M  +G
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639

Query: 181 VDLDLNAYTSLV 192
           +   L  YT L+
Sbjct: 640 LRPSLQTYTLLL 651


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 114/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII G C  S  +++  LL +    G   + V   +L++     G+   AL L +E  
Sbjct: 296 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 355

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+  +V +  L+ GLC  GL+  A+     M + G HP++  Y  +I+GLCK   I 
Sbjct: 356 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 415

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + ++   +  +PD   +  LIDGY K      AL L  RM E G+  D   Y S++
Sbjct: 416 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 475

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G + E    F EMI +G  P+ I    L++       M+EA ++  +M   GL
Sbjct: 476 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 1/248 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  +L  Y   I GLC   +  ++  L+  M+   +  + V   TL+    K   P E
Sbjct: 218 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQE 276

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+  L  M++        T+  +IDG CK  +V+EA +        G  P+   Y +LI+
Sbjct: 277 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 336

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC +  +ERA  LF+E   + + PD   Y +L+ G         AL + N M E G   
Sbjct: 337 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 396

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y  ++ GL + G++ +A V+ ++ I +G LPD     +L+  + +R  +D A++L 
Sbjct: 397 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 456

Query: 244 NEMMGRGL 251
             M   G+
Sbjct: 457 ERMWEYGI 464



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 125/249 (50%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + K IK D+ +Y +++ GLC++     +  +++EM E G   +      +++   K G  
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S+A  ++++ +       V TF  LIDG CK   +  A+    RM ++G+ P+   Y ++
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++GLCK   +      F EM  +   P+   Y  LI+ + +    +EA  +  +M++ G+
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D  ++ +L++G  R G L+ A +LF ++  +G         +L+     + NM  A +
Sbjct: 535 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 594

Query: 242 LQNEMMGRG 250
           + +EM+ +G
Sbjct: 595 IFDEMLSKG 603



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 117/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y  +I GLC      D+ +++++    G   +     TL+D Y K  +
Sbjct: 389 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 448

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L++ M +  I    +T+  +++GLCK+G V E  + F  M   G HPN   Y  
Sbjct: 449 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 508

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  C+ N +E A  +  +M +  + PD  ++  LI G+ ++   + A  L  ++ E G
Sbjct: 509 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 568

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                + + +L+   S   ++  A  +F EM+ +G   D      L+    +  N+D A 
Sbjct: 569 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 628

Query: 241 ELQNEMMGRGLL 252
               EM+ +G +
Sbjct: 629 MHLVEMIKKGFI 640



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 7/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTAN-TVICTTLMDAYFKAG 59
           M    +  DL  +   +   C+ ++   +  LL  +   G  A  TV+C       +  G
Sbjct: 114 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVC-----GLYAHG 168

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              +A  L D+ML + +   +  F  ++  LCK G V EA    G++   G+  N+  Y 
Sbjct: 169 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 228

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             I GLC+   +  A  L D M +   +PD   Y  LI G  K    +EA++   RM   
Sbjct: 229 IWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 287

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D   Y +++ G  +   +QEA  L  + + +G +PD++   SL+      G+++ A
Sbjct: 288 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347

Query: 240 IELQNEMMGRGL 251
           +EL NE   +G+
Sbjct: 348 LELFNEAQAKGI 359



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 95/211 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + T+I G C   K + +  L+  M E G+  +T+   ++++   KAG+ +E     
Sbjct: 432 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 491

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+        +T+ +LI+  C+S  + EA     +M   GLHP+   +  LI G C+ 
Sbjct: 492 QEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN 551

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A  LF ++ ++        +  LI  +    +   A  + + M   G   D   Y
Sbjct: 552 GDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTY 611

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             L+ G  +  ++  A +   EMI +G +P 
Sbjct: 612 RVLIDGSCKTANVDRAYMHLVEMIKKGFIPS 642



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 5/242 (2%)

Query: 11  PLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           P Y  I+  L   +  + +  +   M   G++ +    T  + ++     P  AL LL  
Sbjct: 89  PAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLL-R 147

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
            L  R     V +C ++ GL   G   +A   F +M    + PN+A +  ++  LCK+  
Sbjct: 148 ALPHR---GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 204

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +  A  L  ++ +R M  +   Y   I G  +     EA+ L + M    V  D+  Y +
Sbjct: 205 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNT 263

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ GL +    QEA      M+ +G LPD+    +++  + +   + EA EL  + + +G
Sbjct: 264 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 323

Query: 251 LL 252
            +
Sbjct: 324 FV 325



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 4/165 (2%)

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I    ++G +R+A+D F RM  F   P    Y A++D L      ++A  ++  M    +
Sbjct: 60  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            PD   +T  +  +        AL L   +   G      AY ++V GL   GH  +AR 
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHDARQ 175

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           LF +M+   + P+      +L    +RG++ EA  L  +++ RG+
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGM 220



 Score = 60.1 bits (144), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 68/151 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   + T+I+G C     E + LL  +++E G +A      TL+ A+     
Sbjct: 529 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 588

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + DEML         T+ VLIDG CK+  V  A  +   M   G  P+++ +  
Sbjct: 589 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 648

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           +I+ L   + + +A  +   M K  ++P+  
Sbjct: 649 VINSLTVNHRVFQAVGIIHIMVKIGVVPEVV 679


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 114/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII G C  S  +++  LL +    G   + V   +L++     G+   AL L +E  
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 353

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+  +V +  L+ GLC  GL+  A+     M + G HP++  Y  +I+GLCK   I 
Sbjct: 354 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 413

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + ++   +  +PD   +  LIDGY K      AL L  RM E G+  D   Y S++
Sbjct: 414 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 473

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G + E    F EMI +G  P+ I    L++       M+EA ++  +M   GL
Sbjct: 474 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 1/248 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  +L  Y   I GLC   +  ++  L+  M+   +  + V   TL+    K   P E
Sbjct: 216 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQE 274

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+  L  M++        T+  +IDG CK  +V+EA +        G  P+   Y +LI+
Sbjct: 275 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 334

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC +  +ERA  LF+E   + + PD   Y +L+ G         AL + N M E G   
Sbjct: 335 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 394

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y  ++ GL + G++ +A V+ ++ I +G LPD     +L+  + +R  +D A++L 
Sbjct: 395 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 454

Query: 244 NEMMGRGL 251
             M   G+
Sbjct: 455 ERMWEYGI 462



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 125/249 (50%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + K IK D+ +Y +++ GLC++     +  +++EM E G   +      +++   K G  
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S+A  ++++ +       V TF  LIDG CK   +  A+    RM ++G+ P+   Y ++
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++GLCK   +      F EM  +   P+   Y  LI+ + +    +EA  +  +M++ G+
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D  ++ +L++G  R G L+ A +LF ++  +G         +L+     + NM  A +
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 592

Query: 242 LQNEMMGRG 250
           + +EM+ +G
Sbjct: 593 IFDEMLSKG 601



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 117/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y  +I GLC      D+ +++++    G   +     TL+D Y K  +
Sbjct: 387 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 446

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L++ M +  I    +T+  +++GLCK+G V E  + F  M   G HPN   Y  
Sbjct: 447 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 506

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  C+ N +E A  +  +M +  + PD  ++  LI G+ ++   + A  L  ++ E G
Sbjct: 507 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 566

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                + + +L+   S   ++  A  +F EM+ +G   D      L+    +  N+D A 
Sbjct: 567 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 626

Query: 241 ELQNEMMGRGLL 252
               EM+ +G +
Sbjct: 627 MHLVEMIKKGFI 638



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 7/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTAN-TVICTTLMDAYFKAG 59
           M    +  DL  +   +   C+ ++   +  LL  +   G  A  TV+C       +  G
Sbjct: 112 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVC-----GLYAHG 166

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              +A  L D+ML + +   +  F  ++  LCK G V EA    G++   G+  N+  Y 
Sbjct: 167 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 226

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             I GLC+   +  A  L D M +   +PD   Y  LI G  K    +EA++   RM   
Sbjct: 227 IWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 285

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D   Y +++ G  +   +QEA  L  + + +G +PD++   SL+      G+++ A
Sbjct: 286 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345

Query: 240 IELQNEMMGRGL 251
           +EL NE   +G+
Sbjct: 346 LELFNEAQAKGI 357



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 95/210 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + T+I G C   K + +  L+  M E G+  +T+   ++++   KAG+ +E     
Sbjct: 430 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 489

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+        +T+ +LI+  C+S  + EA     +M   GLHP+   +  LI G C+ 
Sbjct: 490 QEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN 549

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A  LF ++ ++        +  LI  +    +   A  + + M   G   D   Y
Sbjct: 550 GDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTY 609

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
             L+ G  +  ++  A +   EMI +G +P
Sbjct: 610 RVLIDGSCKTANVDRAYMHLVEMIKKGFIP 639



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 5/242 (2%)

Query: 11  PLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           P Y  I+  L   +  + +  +   M   G++ +    T  + ++     P  AL LL  
Sbjct: 87  PAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLL-R 145

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
            L  R     V +C ++ GL   G   +A   F +M    + PN+A +  ++  LCK+  
Sbjct: 146 ALPHR---GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 202

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +  A  L  ++ +R M  +   Y   I G  +     EA+ L + M    V  D+  Y +
Sbjct: 203 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNT 261

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ GL +    QEA      M+ +G LPD+    +++  + +   + EA EL  + + +G
Sbjct: 262 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 321

Query: 251 LL 252
            +
Sbjct: 322 FV 323



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 4/169 (2%)

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           +   I    ++G +R+A+D F RM  F   P    Y A++D L      ++A  ++  M 
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
              + PD   +T  +  +        AL L   +   G      AY ++V GL   GH  
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 169

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +AR LF +M+   + P+      +L    +RG++ EA  L  +++ RG+
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGM 218



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 68/149 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   + T+I+G C     E + LL  +++E G +A      TL+ A+     
Sbjct: 527 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 586

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + DEML         T+ VLIDG CK+  V  A  +   M   G  P+++ +  
Sbjct: 587 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 646

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           +I+ L   + + +A  +   M K  ++P+
Sbjct: 647 VINSLTVNHRVFQAVGIIHIMVKIGVVPE 675


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 123/251 (49%), Gaps = 3/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N K DL  YG +I  L  + +F+++K  +SEM  NGL  N VI T+++D Y K G+
Sbjct: 325 MLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGK 384

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +   M          T+  LI GL +   + +A+    +M + G+ P V  YT 
Sbjct: 385 VGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTT 444

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CKK+  + A  LF+ M +  + PD  AY  L     K    +EA +    +   G
Sbjct: 445 LIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKG 501

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V L    YTSLV G S+ G+   A VL  +M+  G   D      LL+   ++  ++EA+
Sbjct: 502 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEAL 561

Query: 241 ELQNEMMGRGL 251
            + ++M   G+
Sbjct: 562 SILDQMTLSGV 572



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 3/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +  + +   Y ++I+GL  + K   +  L+++M+E+G+T   +  TTL+    K  E
Sbjct: 395 MEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 454

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L + M  + +      + VL   LCKSG   EA  +  R    G+      YT+
Sbjct: 455 FDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRK---GVVLTKVTYTS 511

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG  K    + A  L ++M       D+  Y+ L+    K +   EAL++ ++MT  G
Sbjct: 512 LVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSG 571

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++ AYT ++  + + G    A+ +F+EMI  G  P        +  + + G ++EA 
Sbjct: 572 VKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAE 631

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 632 HLIGEMERDGV 642



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 1/208 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I+GLC E K ++++ LL++    G T   +  T +++ Y KA    +AL +   ML
Sbjct: 268 YNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSML 326

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S  ++ +  + VLI+ L K    +EA +    M   GL PNV +YT++IDG CK   + 
Sbjct: 327 SSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVG 386

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F  M      P+   Y++LI G ++ +   +A+ L  +M E G+   +  YT+L+
Sbjct: 387 AALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLI 446

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDE 220
            G  +      A  LF  M   G+ PDE
Sbjct: 447 QGQCKKHEFDNAFRLFEMMEQNGLTPDE 474



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 1/238 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC      ++ +LL  M ++G + N    T L+    K G    A  +L+EM 
Sbjct: 163 YTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMP 222

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +V T+  +IDG CKSG +++A+     M   G +P+   Y  LI GLC +   +
Sbjct: 223 LRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEK-PD 281

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L ++   R   P    +T +I+GY K E   +AL +K  M      LDL AY  L+
Sbjct: 282 EAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLI 341

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             L +    +EA+    EM   G+ P+ ++  S++  + + G +  A+E+   M   G
Sbjct: 342 NVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG 399



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 3/167 (1%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           ++ +LI GLC++  VREA+     M   G   N+  YT LI GLCK+  I  AR + +EM
Sbjct: 162 SYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEM 221

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
           P R ++P    Y A+IDGY K    K+AL +K  M   G + D   Y  L++GL  CG  
Sbjct: 222 PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGL--CGEK 279

Query: 202 -QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             EA  L ++ I RG  P  I   +++  + +   +D+A+ ++  M+
Sbjct: 280 PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSML 326



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 106/244 (43%), Gaps = 16/244 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  KAD   Y  ++  LC + K  ++  +L +M  +G+  N V  T ++    K G+
Sbjct: 532 MVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGK 591

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A S+ +EM+ S  + +  T+ V I   CK G + EA    G M   G+ P+V  Y  
Sbjct: 592 HDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNV 651

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE---------------- 164
            I+G      ++RA +    M      P+   Y  L+  +LK                  
Sbjct: 652 FINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWI 711

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
                  L  RM + G++     Y+S++ G  +   L+EA VLF  M G+ I P+E +  
Sbjct: 712 ELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYT 771

Query: 225 SLLK 228
            L+K
Sbjct: 772 MLIK 775



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 3/247 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I   +  Y T+I G C + +F+++  L   M++NGLT +      L  A  K+G 
Sbjct: 430 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGR 489

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S L   +   + +T VT+  L+DG  K+G    A     +M + G   +   Y+ 
Sbjct: 490 AEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSV 546

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+  LCK+  +  A ++ D+M    +  +  AYT +I   +K      A ++ N M   G
Sbjct: 547 LLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 606

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                  YT  +    + G ++EA  L  EM   G+ PD +     +      G MD A 
Sbjct: 607 HKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAF 666

Query: 241 ELQNEMM 247
                M+
Sbjct: 667 STLKRMI 673



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 115/277 (41%), Gaps = 34/277 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG--------- 59
           +L  Y  +I GLC E +   ++ +L EM   G+  +      ++D Y K+G         
Sbjct: 194 NLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 253

Query: 60  -------------------------EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
                                    +P EA  LL++ +      TV+TF  +I+G CK+ 
Sbjct: 254 ALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAE 313

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + +A+     M       ++  Y  LI+ L KK   + A+    EM    + P+   YT
Sbjct: 314 RIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYT 373

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           ++IDGY K      AL +   M   G   +   Y+SL++GL +   L +A  L  +M   
Sbjct: 374 SIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 433

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           GI P  I   +L++   ++   D A  L   M   GL
Sbjct: 434 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 470



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 16/223 (7%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K     Y   I   C   + E+++ L+ EM+ +G+  + V     ++     G    A S
Sbjct: 608 KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFS 667

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLV-REAIDYFG---------------RMPDFG 110
            L  M+D+  E    T+ +L+    K  LV    +D  G               RM   G
Sbjct: 668 TLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHG 727

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           L+P    Y+++I G CK   +E A  LFD M  +D+ P+   YT LI      + F +A+
Sbjct: 728 LNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAV 787

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           +    M E G    L +Y  L+ GL   G   +A+ LF +++G
Sbjct: 788 SFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLG 830


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 117/247 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K  +P+Y  +I G+C E + E +  LL EM +NG+  N V  + ++++   +G    A 
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  +M     +  + TF  LI G    G + EA+D +  M   G  PNV  Y  LI GL
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    +E A  + D+M +   +P+ T Y+ LIDG+ K      A    NRM   G   ++
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT +V  L +     +A  L  +M   G  P+ I   + +K     G ++ A++L   
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLER 479

Query: 246 MMGRGLL 252
           M G G L
Sbjct: 480 MQGHGCL 486



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC     E++  +  +M+ +G   N    + L+D + K+G+   A    + M+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VVT+  ++D LCK+ +  +A     +M   G  PN   +   I GLC    +E
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVE 471

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L + M     +P+ T Y  L+D   +   ++EA  L   +    +  +L  Y +++
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           +G SR G + EA  LF + + RG  PD I   +++  + ++G +  A +L
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 5/250 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  ++  Y  ++  LC   + + +  L  EM   G   + V  TT++ +  KAG+
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A       L  R + +V  +  LIDG+CK G +  AI   G M D G+ PNV  Y+ 
Sbjct: 230 IDDA-----RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LC    +E A  LF +M  R    +   +T LI G        EAL+L   M + G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + ++ AY +L+ GL   G L+EA  +  +M   G LP+      L+    + G++  A 
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404

Query: 241 ELQNEMMGRG 250
           E  N M+  G
Sbjct: 405 ETWNRMISHG 414



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 115/243 (47%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A++  +  +I G  +  K  ++  L   M ++G   N V   TL+      G   EAL +
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            D+M  S     V T+ +LIDG  KSG +  A + + RM   G  PNV  YT ++D LCK
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK 431

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
            +  ++A +L ++M      P+T  +   I G   +   + A+ L  RM   G   ++  
Sbjct: 432 NSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITT 491

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  L+  L R    +EA  LF E+  R + P+ +   ++L      G M EA++L  + +
Sbjct: 492 YNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKAL 551

Query: 248 GRG 250
            RG
Sbjct: 552 VRG 554



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 110/251 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y  II  LC+    E +  L ++M   G  AN    T L+   F  G+
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L   M+    E  VV +  LI GLC +G + EA+    +M   G  PNV  Y+ 
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +  A   ++ M      P+   YT ++D   K+  F +A +L  +MT  G
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + + + GL   G ++ A  L   M G G LP+      LL   +     +EA 
Sbjct: 450 CTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509

Query: 241 ELQNEMMGRGL 251
            L  E+  R L
Sbjct: 510 GLFQEIEARNL 520



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 5/246 (2%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K  + +Y  ++  L  E+KF+    L + MK++GL  N      L+ A  K      A  
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHK 200

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM +       VT+  ++  LCK+G + +A +  GR       P+V VY ALIDG+C
Sbjct: 201 LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDGMC 255

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+  IE A  L  EM    + P+  +Y+ +I+      + + A  L  +M   G D +++
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +T L+ G    G L EA  L+  MI  G  P+ +   +L+      G+++EA+++ ++M
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375

Query: 247 MGRGLL 252
              G L
Sbjct: 376 QRSGCL 381



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 1/245 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  Y  ++  LC  S F+ +  L+ +M   G T NT+   T +      G    A+ 
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMK 475

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL+ M        + T+  L+D L +     EA   F  +    L PN+  Y  ++ G  
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG-VDLDL 185
           +   +  A  LF +   R   PD+  Y  +I  Y K    K A  L  R++ +     D+
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI 595

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YTSL+WG     +++EA     + I +GI P+     +L++  ++       I + ++
Sbjct: 596 ITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDD 655

Query: 246 MMGRG 250
           ++ +G
Sbjct: 656 ILRKG 660



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 106/250 (42%), Gaps = 7/250 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G N   DL  +  II G       E +  +   + E G      I   L+DA     +
Sbjct: 102 MDGINCCEDL--FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK 159

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 L   M    +   V T+ +L+  LCK+  V  A   F  M + G  P+   YT 
Sbjct: 160 FQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LCK   I+ AR L          P    Y ALIDG  K    + A+ L   M + G
Sbjct: 220 MVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           VD ++ +Y+ ++  L   G+++ A  LF +M  RG   +      L+K  + RG + EA+
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL 334

Query: 241 ELQNEMMGRG 250
           +L   M+  G
Sbjct: 335 DLWKLMIQDG 344



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 5/169 (2%)

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           F  +I+G  + G   +A+  F R+ +FG  P V +Y  L+D L  +N  +    L+  M 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           K  +IP+   Y  L+    K++    A  L   M+  G   D   YT++V  L + G + 
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +AR    E+ GR   P   +  +L+    + G ++ AI+L  EMM  G+
Sbjct: 232 DAR----ELAGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV 275



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 1/162 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G     ++  Y  ++  L   +K+E++  L  E++   L  N V   T++  + +AG 
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYT 119
             EAL L  + L        +T+  +I   CK G V+ A     R+      HP++  YT
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
           +LI G C    IE A    D+   + + P+   + AL+  + 
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 125/236 (52%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           +C+ S+   +   L +M + G   + V  T+L++ Y       +A++L D++L    +  
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           VVT+  LI  LCK+  +  A++ F +M   G  PNV  Y AL+ GLC+      A  L  
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           +M KR + P+   +TALID ++K     EA  L N M ++ V  D+  Y SL+ GL   G
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            L EAR +F+ M   G  P+E++  +L+    +   +++ +++  EM  +G+++ +
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 111/216 (51%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  YG++I GLC+    ++++ +   M+ NG   N VI TTL+  + K+    + 
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + +  EM    +    +T+ VLI G C  G    A + F +M      P++  Y  L+DG
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC    +E+A  +F+ M KR+M  +   YT +I G  K    ++A +L   +   G+  +
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  YT+++ G  R G + EA  LF +M   G LP+E
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 105/217 (48%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G   K ++  Y T+I  LC       +  L ++M  NG   N V    L+    + G   
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  LL +M+  RIE  V+TF  LID   K G + EA + +  M    ++P+V  Y +LI
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +GLC    ++ AR +F  M +    P+   YT LI G+ K +  ++ + +   M++ GV 
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            +   YT L+ G    G    A+ +F++M  R   PD
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 35/281 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  Y  ++ GLC   ++ D+  LL +M +  +  N +  T L+DA+ K G+  EA  
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKE 279

Query: 67  LLDEMLDSRIEVTVVTF-----------------------------------CVLIDGLC 91
           L + M+   +   V T+                                     LI G C
Sbjct: 280 LYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFC 339

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KS  V + +  F  M   G+  N   YT LI G C     + A+ +F++M  R   PD  
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR 399

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  L+DG   +   ++AL +   M +  +D+++  YT ++ G+ + G +++A  LF  +
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +G+ P+ I   +++     RG + EA  L  +M   G L
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 116/244 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + DL  + +++ G C  ++ ED+  L  ++   G   N V  TTL+    K    + A+
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L ++M  +     VVT+  L+ GLC+ G   +A      M    + PNV  +TALID  
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +  A+ L++ M +  + PD   Y +LI+G   +    EA  +   M   G   + 
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT+L+ G  +   +++   +F+EM  +G++ + I    L++ +   G  D A E+ N+
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388

Query: 246 MMGR 249
           M  R
Sbjct: 389 MSSR 392



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 35/177 (19%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y T+I G C   + ED   +  EM + G+ ANT+  T L+  Y   G P  A  + ++M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389

Query: 72  LDSR-----------------------------------IEVTVVTFCVLIDGLCKSGLV 96
              R                                   +++ +VT+ ++I G+CK G V
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449

Query: 97  REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
            +A D F  +   G+ PNV  YT +I G C++  I  A +LF +M +   +P+ + Y
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 103/223 (46%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           +F D+  L + M  +    + +  T L+    K       +SL ++M    I   + T  
Sbjct: 63  QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +++  +C S     A  + G+M   G  P++  +T+L++G C  N IE A  LFD++   
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              P+   YT LI    K+     A+ L N+M   G   ++  Y +LV GL   G   +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             L  +M+ R I P+ I   +L+    + G + EA EL N M+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 88/188 (46%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           ++AL L   M+ SR   +++ F  L+  + K       I  F +M   G+ P +     +
Sbjct: 65  NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +  +C  +   RA     +M K    PD   +T+L++GY      ++A+ L +++  +G 
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++  YT+L+  L +  HL  A  LF++M   G  P+ +   +L+    E G   +A  
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244

Query: 242 LQNEMMGR 249
           L  +MM R
Sbjct: 245 LLRDMMKR 252


>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 418

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E  E G  A+      LM  + K GE   A S+ D + 
Sbjct: 116 YFKLVWGF------------YEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM  + ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EMI +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 110/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+ +L  EM + GL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G  P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVV 417



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 116/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD  +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G+ P+      ++ +  ++G++    +L  EM   G
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 105/209 (50%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+ G  K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A VLF EM+ +G++P+ + 
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI+ D   Y  +I GLC E +  D++ +L EM   GL       T +++ + K G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 61  PSEALSLLDEMLDSRIEVTVVT 82
                 LL EM     + +VVT
Sbjct: 397 VWTGSKLLKEMQRDGYKPSVVT 418


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 114/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII G C  S  +++  LL +    G   + V   +L++     G+   AL L +E  
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQ 352

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+  +V +  L+ GLC  GL+  A+     M + G HP++  Y  +I+GLCK   I 
Sbjct: 353 AKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNIS 412

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + ++   +  +PD   +  LIDGY K      AL L  RM E G+  D   Y S++
Sbjct: 413 DATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVL 472

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G + E    F EMI +G  P+ I    L++       M+EA ++  +M   GL
Sbjct: 473 NGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 1/248 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  +L  Y   I GLC   +  ++  L+  M+   +  + V   TL+    K   P E
Sbjct: 215 RGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQE 273

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+  L  M++        T+  +IDG CK  +V+EA +        G  P+   Y +LI+
Sbjct: 274 AMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN 333

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC +  +ERA  LF+E   + + PD   Y +L+ G         AL + N M E G   
Sbjct: 334 GLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP 393

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y  ++ GL + G++ +A V+ ++ I +G LPD     +L+  + +R  +D A++L 
Sbjct: 394 DIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 453

Query: 244 NEMMGRGL 251
             M   G+
Sbjct: 454 ERMWEYGI 461



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 125/249 (50%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + K IK D+ +Y +++ GLC++     +  +++EM E G   +      +++   K G  
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S+A  ++++ +       V TF  LIDG CK   +  A+    RM ++G+ P+   Y ++
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++GLCK   +      F EM  +   P+   Y  LI+ + +    +EA  +  +M++ G+
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D  ++ +L++G  R G L+ A +LF ++  +G         +L+     + NM  A +
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 591

Query: 242 LQNEMMGRG 250
           + +EM+ +G
Sbjct: 592 IFDEMLSKG 600



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 117/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y  +I GLC      D+ +++++    G   +     TL+D Y K  +
Sbjct: 386 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L++ M +  I    +T+  +++GLCK+G V E  + F  M   G HPN   Y  
Sbjct: 446 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 505

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  C+ N +E A  +  +M +  + PD  ++  LI G+ ++   + A  L  ++ E G
Sbjct: 506 LIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKG 565

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                + + +L+   S   ++  A  +F EM+ +G   D      L+    +  N+D A 
Sbjct: 566 YSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAY 625

Query: 241 ELQNEMMGRGLL 252
               EM+ +G +
Sbjct: 626 MHLVEMIKKGFI 637



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 7/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTAN-TVICTTLMDAYFKAG 59
           M    +  DL  +   +   C+ ++   +  LL  +   G  A  TV+C       +  G
Sbjct: 111 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVC-----GLYAHG 165

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              +A  L D+ML + +   +  F  ++  LCK G V EA    G++   G+  N+  Y 
Sbjct: 166 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 225

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             I GLC+   +  A  L D M +   +PD   Y  LI G  K    +EA++   RM   
Sbjct: 226 IWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 284

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D   Y +++ G  +   +QEA  L  + + +G +PD++   SL+      G+++ A
Sbjct: 285 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344

Query: 240 IELQNEMMGRGL 251
           +EL NE   +G+
Sbjct: 345 LELFNEAQAKGI 356



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 95/210 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + T+I G C   K + +  L+  M E G+  +T+   ++++   KAG+ +E     
Sbjct: 429 DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETF 488

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+        +T+ +LI+  C+S  + EA     +M   GLHP+   +  LI G C+ 
Sbjct: 489 QEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRN 548

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +E A  LF ++ ++        +  LI  +    +   A  + + M   G   D   Y
Sbjct: 549 GDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTY 608

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
             L+ G  +  ++  A +   EMI +G +P
Sbjct: 609 RVLIDGSCKTANVDRAYMHLVEMIKKGFIP 638



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 5/242 (2%)

Query: 11  PLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           P Y  I+  L   +  + +  +   M   G++ +    T  + ++     P  AL LL  
Sbjct: 86  PAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLL-R 144

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
            L  R     V +C ++ GL   G   +A   F +M    + PN+A +  ++  LCK+  
Sbjct: 145 ALPHR---GAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGD 201

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +  A  L  ++ +R M  +   Y   I G  +     EA+ L + M    V  D+  Y +
Sbjct: 202 VLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNT 260

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ GL +    QEA      M+ +G LPD+    +++  + +   + EA EL  + + +G
Sbjct: 261 LIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKG 320

Query: 251 LL 252
            +
Sbjct: 321 FV 322



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 4/169 (2%)

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           +   I    ++G +R+A+D F RM  F   P    Y A++D L      ++A  ++  M 
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
              + PD   +T  +  +        AL L   +   G      AY ++V GL   GH  
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTH 168

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +AR LF +M+   + P+      +L    +RG++ EA  L  +++ RG+
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGM 217



 Score = 59.3 bits (142), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 68/149 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   + T+I+G C     E + LL  +++E G +A      TL+ A+     
Sbjct: 526 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 585

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + DEML         T+ VLIDG CK+  V  A  +   M   G  P+++ +  
Sbjct: 586 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGR 645

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           +I+ L   + + +A  +   M K  ++P+
Sbjct: 646 VINSLTVNHRVFQAVGIIHIMVKIGVVPE 674


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  120 bits (301), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 35/292 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +K  +  Y +++ G C + + +++  L SEM + G   N V  TTLM  Y K   
Sbjct: 421 MKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKA 480

Query: 61  PSEALSLLDEMLDSRIEV-----------------------------------TVVTFCV 85
              A +LL+EM  + +                                     T +T+  
Sbjct: 481 FDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNS 540

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I+G  K+G++  A   + +M   G+ PN+  YT+ IDG C+ NC + A  L   + +  
Sbjct: 541 IINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDG 600

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD  AY A ID + K  +   AL+    + + G+  D+  Y S V G      + EA 
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEAS 660

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
             ++ MI + ++ D  +  +L+    + GN+  A+EL +EMM   ++   K 
Sbjct: 661 KFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKT 712



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 37/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  +K D  +Y   I GLC     + +  +L +M+E G     +  ++++D   K G 
Sbjct: 211 MAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGR 270

Query: 61  PSEALSLLDEM-LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             EAL L D+M L +  ++ VV   +L+ G C  G V +A+D F  +   G+ P    Y 
Sbjct: 271 MDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYG 330

Query: 120 ALIDG------------LCKKNCIERA------------RNLFDEMPKRDMI-------- 147
            LI G            LC++  IE+             + L  +   +D I        
Sbjct: 331 VLIKGCDAEGMSDETYKLCRQ-MIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVD 389

Query: 148 ---PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PD   Y  LI    KH+   EA+NL ++M E GV   +  Y SL+ G    G + EA
Sbjct: 390 TGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEA 449

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             L+ EM  +G  P+E+   +L+K + ++   D A  L NEM   G+  G
Sbjct: 450 LKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCG 499



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 1/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I G   E   +++  L  +M E GL  +T     ++    +     +A+ LL+ ++
Sbjct: 329 YGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVV 388

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+ +   V T+  LI  LCK   + EA++ + +M + G+ P++  Y +L+ G C+K  ++
Sbjct: 389 DTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMD 447

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L+ EMP +   P+   YT L+ GY+K ++F  A  L N M + GV      Y  L+
Sbjct: 448 EALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILI 507

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL     + E   +    +  G +P  +   S++    + G M  A  +  +M  +G+
Sbjct: 508 NGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 108/234 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GL + ++  +   +L      G    T+   ++++ + KAG    A  +  +M 
Sbjct: 503 YNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMR 562

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   +VT+   IDG C++     A+     +   G+ P++A Y A ID  CK+  + 
Sbjct: 563 KKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMS 622

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA +    + K  + PD T Y + + GY   +   EA      M +  V  D   YT+L+
Sbjct: 623 RALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLI 682

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            G S+ G++  A  L+ EM+   ++PD+    +L       G++D A  L ++M
Sbjct: 683 DGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDM 736



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 110/240 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G         +  +  +M++ G+T N V  T+ +D Y +      A+ LL  + 
Sbjct: 538 YNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR 597

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+  +  +   ID  CK G +  A+ +   +   GL P+V VY + + G      + 
Sbjct: 598 RDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMA 657

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   +  M K+ ++ DT  YT LIDG+ K  +   AL L + M    V  D   +T+L 
Sbjct: 658 EASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALT 717

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL R G +  A+ L  +M    + P+ +    L+      G + EA +L +EM+  G++
Sbjct: 718 HGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVV 777



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 98/220 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  ++  Y + I G C  +  + +  LL  ++ +G+  +       +D + K G 
Sbjct: 561 MRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGN 620

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL  L  +L   +   V  +   + G     ++ EA  ++  M    +  +  +YT 
Sbjct: 621 MSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTT 680

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +  A  L+ EM    +IPD   +TAL  G  +      A  L + M  + 
Sbjct: 681 LIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLD 740

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           V  ++  Y  L+    R G LQEA  L  EM+  G++PD+
Sbjct: 741 VSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDD 780



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 100/243 (41%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  YG +I  LC   K  ++  L  +MKE G+  + V   +L+  Y + G   EAL L 
Sbjct: 394 DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLY 453

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM D       VT+  L+ G  K      A      M   G+      Y  LI+GL   
Sbjct: 454 SEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMV 513

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +     +         +P T  Y ++I+G++K      A  +  +M + G+  ++  Y
Sbjct: 514 NRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTY 573

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           TS + G  R      A  L   +   GI PD     + +    ++GNM  A+     ++ 
Sbjct: 574 TSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLK 633

Query: 249 RGL 251
            GL
Sbjct: 634 DGL 636



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 1/230 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GL  + +++D+  LL  + + G+  +      L+    K  +  EA++L D+M 
Sbjct: 364 FNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMK 422

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ ++ ++VT+  L+ G C+ G + EA+  +  MPD G  PN   YT L+ G  KK   +
Sbjct: 423 EAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFD 482

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L +EM +  +      Y  LI+G        E   +  R    G       Y S++
Sbjct: 483 NAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSII 542

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            G  + G +  A  ++ +M  +GI P+ +   S +  +      D A++L
Sbjct: 543 NGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKL 592



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 1/220 (0%)

Query: 34  SEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS 93
           S M   G+  +    T L+    +    ++AL+L DEM           + V+I    + 
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G+  +A+  F  M   G+ P+  VY   I GLCK    +RA  +  +M +    P    Y
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 154 TALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           ++++D  +K     EAL LK++M    G  +D+   T L+ G    G + +A  LF E++
Sbjct: 259 SSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVV 318

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             G+ P  +    L+K     G  DE  +L  +M+ +GLL
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLL 358



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 81/183 (44%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D+  Y   I   C +     +   L  + ++GLT +  +  + +  Y      +EA 
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEAS 660

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
                M+  R+      +  LIDG  K G V  A++ +  M    + P+   +TAL  GL
Sbjct: 661 KFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGL 720

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   I+ A+ L D+M + D+ P+   Y  LI+  ++    +EA  L + M   GV  D 
Sbjct: 721 CRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDD 780

Query: 186 NAY 188
             Y
Sbjct: 781 TTY 783



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 113/295 (38%), Gaps = 72/295 (24%)

Query: 28  DSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLI 87
           D+  L  EM+  G  A+  +   ++ A  + G   +A+ L DEM  + ++     + + I
Sbjct: 168 DALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITI 227

Query: 88  DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID------------------------ 123
            GLCK      A+   G+M + G  P    Y++++D                        
Sbjct: 228 SGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGK 287

Query: 124 ------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI-------------- 157
                       G C    + +A +LFDE+    + P    Y  LI              
Sbjct: 288 KMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYK 347

Query: 158 ---------------------DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
                                 G L+ + +K+A+ L   + + GV  D+  Y  L+  L 
Sbjct: 348 LCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGVP-DVFTYGCLIHWLC 406

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   L EA  L+ +M   G+ P  +   SLL  + E+G MDEA++L +EM  +G 
Sbjct: 407 KHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGF 461



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 59/156 (37%), Gaps = 35/156 (22%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + AD  +Y                                   TTL+D + K G 
Sbjct: 666 MIKQRVVADTEIY-----------------------------------TTLIDGFSKVGN 690

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + AL L  EM+ + +     TF  L  GLC+SG +  A      M    + PN+  Y  
Sbjct: 691 VAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNM 750

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
           LI+   +   ++ A  L DEM    ++PD T Y  L
Sbjct: 751 LINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 3/154 (1%)

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           + RM   G+ P+    T L+    +      A  LFDEM  +    D   Y  +I   ++
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                +A+ L + M   GV  D   Y   + GL +      A  +  +M   G  P E+ 
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
             S++    + G MDEA+ L+++M+   L +G K
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQML---LATGKK 288


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN   D+  Y T++ GLC E + +++  LL EM+  G   N V    L+DA  K G+
Sbjct: 200 MPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGD 259

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  L+D M         VT+  LI GLC  G + +A+    +M      PN   Y  
Sbjct: 260 LSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGT 319

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GL K+   E   ++   M +R    +   Y++LI G  K    + A+ L   M E G
Sbjct: 320 IINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG 379

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y + + GL R     EA  +  EM+ +G LP+     SL+K  +++G+  +AI
Sbjct: 380 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 439

Query: 241 ELQNEMMGRGL 251
            +  EMM + +
Sbjct: 440 LVWKEMMSQDM 450



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 118/240 (49%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGTII GL  + + ED   +L  M+E G  AN  I ++L+   FK G+   A+ L  EM 
Sbjct: 317 YGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMA 376

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +  VV +   IDGLC+     EA D    M   G  PN   Y++L+ G  KK   +
Sbjct: 377 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 436

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  ++ EM  +DM  +    + L++G  +    +EAL +   M   G+  D+ AY+S++
Sbjct: 437 KAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMI 496

Query: 193 WGLSRCGHLQEARVLFHEMIGR--GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL   G + +   LF+EM  +     PD +    L      + N+  AI+L N M+  G
Sbjct: 497 KGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEG 556



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 7/219 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K ++ +YG  I GLC + K ++++ +L EM   G   N    ++LM  +FK G+
Sbjct: 375 MAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGD 434

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  EM+   +   VV   VL++GLC+SG +REA+  +  M   GL P+V  Y++
Sbjct: 435 SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSS 494

Query: 121 LIDGLCKKNCIERARNLFDEM----PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +I GLC    +++   LF EM    PK    PD   Y  L +   + ++   A++L N M
Sbjct: 495 MIKGLCDVGSVDKGLKLFYEMQCQEPKSR--PDVVTYNILFNALCRQDNLTRAIDLLNSM 552

Query: 177 TEVGVDLD-LNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            + G D D L     L     R    Q+ R+   E++ R
Sbjct: 553 LDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVR 591



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 118/234 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC++ K + +  LL +M  +    N V   T+++   K     + + +L  M 
Sbjct: 282 YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSME 341

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +     +  LI GL K G    A+  +  M + G  PNV VY A IDGLC+    +
Sbjct: 342 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPD 401

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A ++  EM  +  +P+   Y++L+ G+ K    ++A+ +   M    +  ++   + L+
Sbjct: 402 EAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLL 461

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL   G L+EA  ++  M+G G+ PD +   S++K   + G++D+ ++L  EM
Sbjct: 462 NGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 515



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 116/253 (45%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K  + +L  Y  II  LC   + + +     EM       +    +TLM+   K     
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA+ LLDEM         VTF VLID L K+G +  A      M   G  PN   Y  LI
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GLC K  +++A +L ++M     +P+   Y  +I+G +K    ++ +++   M E G  
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 346

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +   Y+SL+ GL + G  + A  L+ EM  +G  P+ ++  + +         DEA ++
Sbjct: 347 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 406

Query: 243 QNEMMGRGLLSGS 255
             EM+ +G L  +
Sbjct: 407 LQEMLSKGFLPNA 419



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 39/237 (16%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP--- 107
           L++ Y  + E      +LD M      +T   F ++     K+ L  EA+++F RM    
Sbjct: 71  LIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDL 130

Query: 108 --------------------DF----------------GLHPNVAVYTALIDGLCKKNCI 131
                               DF                G  PN+  Y  +I  LCK   I
Sbjct: 131 HCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQI 190

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +RA + F EMP ++  PD   Y+ L++G  K     EA+ L + M   G   +   +  L
Sbjct: 191 DRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVL 250

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           +  LS+ G L  A  L   M  +G +P+E+   +L+     +G +D+A+ L  +M+ 
Sbjct: 251 IDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVS 307


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 130/292 (44%), Gaps = 35/292 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +K  +  Y +++ G C + + +++  L SEM + G   N V  TTLM  Y K   
Sbjct: 421 MKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKA 480

Query: 61  PSEALSLLDEMLDSRIEV-----------------------------------TVVTFCV 85
              A +LL+EM  + +                                     T +T+  
Sbjct: 481 FDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNS 540

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I+G  K+G++  A   + +M   G+ PN+  YT+ IDG C+ NC + A  L   + +  
Sbjct: 541 IINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDG 600

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD  AY A ID + K  +   AL+    + + G+  D+  Y S V G      + EA 
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEAS 660

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
             ++ MI + ++ D  +  +L+    + GN+  A+EL +EMM   ++   K 
Sbjct: 661 KFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKT 712



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 123/290 (42%), Gaps = 37/290 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTA----------------- 43
           M G  +K D  +Y   I GLC     + +  +L +M+E G                    
Sbjct: 211 MAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRR 270

Query: 44  -------------------NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
                              + V+ T LM  Y   GE  +AL L DE++   +  T VT+ 
Sbjct: 271 MDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYG 330

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VLI G    G+  E      +M + GL P+   +  +I GL +    + A  L  ++   
Sbjct: 331 VLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLL-KLVVD 389

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
             +PD   Y  LI    KH+   EA+NL ++M E GV   +  Y SL+ G    G + EA
Sbjct: 390 TGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEA 449

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             L+ EM  +G  P+E+   +L+K + ++   D A  L NEM   G+  G
Sbjct: 450 LKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCG 499



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 1/239 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I G   E   +++  L  +M E GL  +T     ++    +     +A+ LL  ++
Sbjct: 329 YGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVV 388

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+ +   V T+  LI  LCK   + EA++ + +M + G+ P++  Y +L+ G C+K  ++
Sbjct: 389 DTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMD 447

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L+ EMP +   P+   YT L+ GY+K ++F  A  L N M + GV      Y  L+
Sbjct: 448 EALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILI 507

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL     + E   +    +  G +P  +   S++    + G M  A  +  +M  +G+
Sbjct: 508 NGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGI 566



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 108/234 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GL + ++  +   +L      G    T+   ++++ + KAG    A  +  +M 
Sbjct: 503 YNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMR 562

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I   +VT+   IDG C++     A+     +   G+ P++A Y A ID  CK+  + 
Sbjct: 563 KKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMS 622

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA +    + K  + PD T Y + + GY   +   EA      M +  V  D   YT+L+
Sbjct: 623 RALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLI 682

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            G S+ G++  A  L+ EM+   ++PD+    +L       G++D A  L ++M
Sbjct: 683 DGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDM 736



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 110/240 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G         +  +  +M++ G+T N V  T+ +D Y +      A+ LL  + 
Sbjct: 538 YNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR 597

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+  +  +   ID  CK G +  A+ +   +   GL P+V VY + + G      + 
Sbjct: 598 RDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMA 657

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   +  M K+ ++ DT  YT LIDG+ K  +   AL L + M    V  D   +T+L 
Sbjct: 658 EASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALT 717

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL R G +  A+ L  +M    + P+ +    L+      G + EA +L +EM+  G++
Sbjct: 718 HGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVV 777



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 98/220 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I  ++  Y + I G C  +  + +  LL  ++ +G+  +       +D + K G 
Sbjct: 561 MRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGN 620

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL  L  +L   +   V  +   + G     ++ EA  ++  M    +  +  +YT 
Sbjct: 621 MSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTT 680

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +  A  L+ EM    +IPD   +TAL  G  +      A  L + M  + 
Sbjct: 681 LIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLD 740

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           V  ++  Y  L+    R G LQEA  L  EM+  G++PD+
Sbjct: 741 VSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDD 780



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 100/243 (41%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  YG +I  LC   K  ++  L  +MKE G+  + V   +L+  Y + G   EAL L 
Sbjct: 394 DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLY 453

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM D       VT+  L+ G  K      A      M   G+      Y  LI+GL   
Sbjct: 454 SEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMV 513

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +     +         +P T  Y ++I+G++K      A  +  +M + G+  ++  Y
Sbjct: 514 NRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTY 573

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           TS + G  R      A  L   +   GI PD     + +    ++GNM  A+     ++ 
Sbjct: 574 TSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLK 633

Query: 249 RGL 251
            GL
Sbjct: 634 DGL 636



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 1/230 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GL  + +++D+  LL  + + G+  +      L+    K  +  EA++L D+M 
Sbjct: 364 FNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMK 422

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ ++ ++VT+  L+ G C+ G + EA+  +  MPD G  PN   YT L+ G  KK   +
Sbjct: 423 EAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFD 482

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L +EM +  +      Y  LI+G        E   +  R    G       Y S++
Sbjct: 483 NAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSII 542

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            G  + G +  A  ++ +M  +GI P+ +   S +  +      D A++L
Sbjct: 543 NGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKL 592



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 1/223 (0%)

Query: 34  SEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS 93
           S M   G+  +    T L+         ++AL+L DEM           + V+I    + 
Sbjct: 139 SRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRG 198

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G+  +A+  F  M   G+ P+  VY   I GLCK    +RA  +  +M +    P    Y
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 154 TALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           ++++D  +K     EAL LK++M    G  +D+   T L+ G    G + +A  LF E++
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVV 318

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             G+ P  +    L+K     G  DE  +L  +M+ +GLL  +
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPST 361



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 81/183 (44%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D+  Y   I   C +     +   L  + ++GLT +  +  + +  Y      +EA 
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEAS 660

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
                M+  R+      +  LIDG  K G V  A++ +  M    + P+   +TAL  GL
Sbjct: 661 KFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGL 720

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   I+ A+ L D+M + D+ P+   Y  LI+  ++    +EA  L + M   GV  D 
Sbjct: 721 CRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDD 780

Query: 186 NAY 188
             Y
Sbjct: 781 TTY 783



 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 113/295 (38%), Gaps = 72/295 (24%)

Query: 28  DSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLI 87
           D+  L  EM+  G  A+  +   ++ A  + G   +A+ L DEM  + ++     + + I
Sbjct: 168 DALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITI 227

Query: 88  DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID------------------------ 123
            GLCK      A+   G+M + G  P    Y++++D                        
Sbjct: 228 SGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGK 287

Query: 124 ------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI-------------- 157
                       G C    + +A +LFDE+    + P    Y  LI              
Sbjct: 288 KMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYK 347

Query: 158 ---------------------DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
                                 G L+ + +K+A+ L   + + GV  D+  Y  L+  L 
Sbjct: 348 LCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGVP-DVFTYGCLIHWLC 406

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   L EA  L+ +M   G+ P  +   SLL  + E+G MDEA++L +EM  +G 
Sbjct: 407 KHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGF 461



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 59/156 (37%), Gaps = 35/156 (22%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + + AD  +Y                                   TTL+D + K G 
Sbjct: 666 MIKQRVVADTEIY-----------------------------------TTLIDGFSKVGN 690

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + AL L  EM+ + +     TF  L  GLC+SG +  A      M    + PN+  Y  
Sbjct: 691 VAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNM 750

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
           LI+   +   ++ A  L DEM    ++PD T Y  L
Sbjct: 751 LINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDIL 786



 Score = 40.0 bits (92), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 49/114 (42%)

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSR 197
           +  M  R ++PD  + T L+       S  +AL L + M   G   D   Y  ++    R
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G   +A  LF EM G G+ PDE +    +    +  + D A+++  +M   G 
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGF 251


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  + K ++  Y ++I G C E K   +++LLS MKE GL  NT   T L+D + KAG 
Sbjct: 363 VRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGN 422

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+D M        + T+   ID LCK G   EA     +    GL  +   YT 
Sbjct: 423 FEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTI 482

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC++     A   F +M K  + PD   Y  LI  + +    +E+  L      +G
Sbjct: 483 LISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLG 542

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTS++ G  R  ++  A   F+ M   G  PD +   +L+    +   +DEA 
Sbjct: 543 LVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEAC 602

Query: 241 ELQNEMMGRGL 251
           +L   M+ +GL
Sbjct: 603 QLYEAMVDKGL 613



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D   Y  +    C   +  D+   L +M   G   +   CT ++  + + G 
Sbjct: 222 MRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGF 281

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S      D+ ++  ++  ++ F  LI+GLCK G +++A +    M   G  PNV  +TA
Sbjct: 282 ASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTA 341

Query: 121 LIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LIDGLCKK   E+A  LF ++ +  D  P+   YT++I GY K +    A  L +RM E 
Sbjct: 342 LIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQ 401

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  +   YT L+ G S+ G+ ++A  L   M   G   +     + +    ++G   EA
Sbjct: 402 GLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEA 461

Query: 240 IELQNEMMGRGL 251
            +L  +    GL
Sbjct: 462 CKLLKKGFRLGL 473



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 113/248 (45%), Gaps = 1/248 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +L  + ++I GLC     + +  +L EM + G   N    T L+D   K G   +A 
Sbjct: 297 LKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAF 356

Query: 66  SLLDEMLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
            L  +++ S   +  V T+  +I G CK   +  A     RM + GL PN   YT LIDG
Sbjct: 357 RLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDG 416

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K    E+A  L D M K     +   Y A ID   K   F EA  L  +   +G+  D
Sbjct: 417 HSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQAD 476

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              YT L+  L R    +EA V F +M   G+ PD     +L+     +  M+E+ +L  
Sbjct: 477 TVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFA 536

Query: 245 EMMGRGLL 252
           E +G GL+
Sbjct: 537 EAVGLGLV 544



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 1/221 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  EM+  G+  ++V    +  AY + G  S+    L +M+     V   T  ++I   C
Sbjct: 218 VFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFC 277

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G       YF +  + GL PN+  +T+LI+GLCK+  I++A  + +EM K+   P+  
Sbjct: 278 EKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVY 337

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEV-GVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            +TALIDG  K    ++A  L  ++        +++ YTS++ G  +   L  A +L   
Sbjct: 338 THTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSR 397

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  +G++P+      L+  H + GN ++A EL + M   G 
Sbjct: 398 MKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGF 438



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 3/227 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++AD   Y  +I  LC  +   ++ +  S+M + G+  +     TL+ A+ +     E+ 
Sbjct: 473 LQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESE 532

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  E +   +  T  T+  +I G C+   V  A+ +F RM D G  P+   Y ALI GL
Sbjct: 533 KLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGL 592

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK++ ++ A  L++ M  + + P       L   Y K +    A+ +  R+ +    L +
Sbjct: 593 CKESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERLDK---KLWI 649

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
               +L+  L     +  A + FH+++ +    D +   +     YE
Sbjct: 650 RTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYE 696



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 111/236 (47%), Gaps = 5/236 (2%)

Query: 25  KFEDSKLLLSEMKENGL--TANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           KF+++  ++ EM+ +GL  T  T+ C T +    + G    A ++ DEM    +    V+
Sbjct: 176 KFQEAVNMVIEMENHGLVLTVRTLNCVTGVAG--EMGLVGYAENVFDEMRVRGVCPDSVS 233

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           + ++    C+ G + +   +   M   G   + A  T +I   C+K    R    FD+  
Sbjct: 234 YKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWV 293

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           +  + P+   +T+LI+G  K  S K+A  +   M + G   ++  +T+L+ GL + G  +
Sbjct: 294 ELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTE 353

Query: 203 EARVLFHEMI-GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
           +A  LF +++      P+     S++  + +   ++ A  L + M  +GL+  +K 
Sbjct: 354 KAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKT 409



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 88/192 (45%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++  + + G+  EA++++ EM +  + +TV T   +     + GLV  A + F  M   G
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + P+   Y  +    C+   I        +M +R  + D    T +I  + +        
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
              ++  E+G+  +L  +TSL+ GL + G +++A  +  EM+ +G  P+     +L+   
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346

Query: 231 YERGNMDEAIEL 242
            ++G  ++A  L
Sbjct: 347 CKKGWTEKAFRL 358



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 65/157 (41%)

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G  +EA++    M + GL   V     +     +   +  A N+FDEM  R + PD+ +Y
Sbjct: 175 GKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSY 234

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             +   Y +     +       M   G  +D    T ++      G        F + + 
Sbjct: 235 KLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVE 294

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G+ P+ I   SL+    +RG++ +A E+  EM+ +G
Sbjct: 295 LGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKG 331


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 119/254 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK  +  YG +I G   +    +    L  M ENGL+ +  I      AY K G 
Sbjct: 330 MIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 389

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + ++M    +   VV +  LID LCK G V +A   F +M + G+ PN+ V+ +
Sbjct: 390 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 449

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC  +  ERA  L  EM  + + P+   +  LI          E   L + M  VG
Sbjct: 450 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 509

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D  +YT L+ G    G   EA  +F  M+  G+ P E+   +LL  +     +D+A 
Sbjct: 510 VRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 569

Query: 241 ELQNEMMGRGLLSG 254
            L  EM+ +G+  G
Sbjct: 570 CLFREMLRKGVTPG 583



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y T+I GLC    F+ ++ +  +M +NG   N      L+  Y   G+
Sbjct: 225 MIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGK 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + +L+EM    ++    T+  L++ LCK+G  REA  +F  M   G+ P V+ Y  
Sbjct: 285 WKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGI 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G   K  +    +  D M +  + PD   +      Y K     +A+++ N+M + G
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 404

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +L+  L + G + +A V F++MI  G+ P+ ++  SL+         + A 
Sbjct: 405 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 464

Query: 241 ELQNEMMGRGL 251
           EL  EM+ +G+
Sbjct: 465 ELVYEMLDQGI 475



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 112/240 (46%), Gaps = 4/240 (1%)

Query: 16  IIWGLCIESKF-EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++ GLC   +  E   +LL  M E G   +TV  T L+          EAL LL  M D 
Sbjct: 131 LLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADD 190

Query: 75  ---RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
              R    VV++ ++I+G    G V +  + F  M D G+ P+V  YT +IDGLCK    
Sbjct: 191 HGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLF 250

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +RA  +F +M      P+   Y  LI GYL    +KE + +   M+  G+  D   Y SL
Sbjct: 251 DRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSL 310

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  L + G  +EAR  F  MI +GI P       L+  +  +G + E     + M+  GL
Sbjct: 311 LNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGL 370



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 113/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K D   YG+++  LC   +  +++     M   G+         L+  Y   G 
Sbjct: 295 MSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGA 354

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SE  S LD M+++ +      F +      K G++ +A+D F +M   GL PNV  Y A
Sbjct: 355 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 414

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++ A   F++M    + P+   + +L+ G    + ++ A  L   M + G
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   + +L+  L   G + E R L   M   G+ PD      L+  +   G  DEA 
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAE 534

Query: 241 ELQNEMMGRGL 251
           ++ + M+  GL
Sbjct: 535 KVFDGMVSIGL 545



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 115/252 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++ ++ ++++GLC   K+E ++ L+ EM + G+  N V   TL+      G 
Sbjct: 435 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 494

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L+D M    +     ++  LI G C +G   EA   F  M   GL P    Y  
Sbjct: 495 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNT 554

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C  + I+ A  LF EM ++ + P    Y  ++ G  + + F EA  L   M   G
Sbjct: 555 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y  ++ GL +   + EA  +F  +  +G+  + I    ++    + G  ++A+
Sbjct: 615 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 674

Query: 241 ELQNEMMGRGLL 252
           +L   +   GL+
Sbjct: 675 DLFAAIPANGLV 686



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 114/249 (45%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+    ++  Y  +I G   E + +    L  EM + G+  + V  TT++D   KA    
Sbjct: 192 GRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFD 251

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A  +  +M+D+  +    T+  LI G    G  +E +     M   GL P+   Y +L+
Sbjct: 252 RAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLL 311

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + LCK      AR  FD M ++ + P  + Y  LI GY    +  E  +  + M E G+ 
Sbjct: 312 NYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLS 371

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D + +       ++CG + +A  +F++M   G+ P+ +   +L+    + G +D+A   
Sbjct: 372 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 431

Query: 243 QNEMMGRGL 251
            N+M+  G+
Sbjct: 432 FNQMINEGV 440



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 107/251 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  ++  YG +I  LC   + +D+++  ++M   G+T N V+  +L+       +
Sbjct: 400 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 459

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+ EMLD  I    V F  LI  LC  G V E       M   G+ P+   YT 
Sbjct: 460 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 519

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C     + A  +FD M    + P    Y  L+ GY       +A  L   M   G
Sbjct: 520 LISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 579

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V   +  Y +++ GL +     EA+ L+  MI  G   D      +L    +   +DEA 
Sbjct: 580 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 639

Query: 241 ELQNEMMGRGL 251
           ++   +  +GL
Sbjct: 640 KMFQSLCSKGL 650



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 113/239 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D   Y  +I G C+  + ++++ +   M   GL+   V   TL+  Y  A  
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  EML   +   VVT+  ++ GL ++    EA + +  M + G   ++  Y  
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK NC++ A  +F  +  + +  +   +T +I   LK    ++A++L   +   G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           +  ++  Y  +   L   G L+E   LF  M   G  P+  +  +L+++   RG++  A
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 743



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 105/270 (38%), Gaps = 45/270 (16%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKA--GEPSE-ALSLLDEML---DSRIEVTV 80
           +D+  L  E+  +   A+      L+ A  +A     SE A+S  + M+     ++   +
Sbjct: 31  DDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNL 90

Query: 81  VTFCVLIDGLCKSGLVREAIDYFG------------------------------------ 104
            T+ +LI   C+ G +      FG                                    
Sbjct: 91  CTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQ 150

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK---RDMIPDTTAYTALIDGYL 161
           RMP+ G  P+   YT L+ GLC +   E A  L   M     R   P+  +Y+ +I+G+ 
Sbjct: 151 RMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFF 210

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
                 +  NL   M + G+  D+  YT+++ GL +      A  +F +MI  G  P+  
Sbjct: 211 TEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNY 270

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               L+  +   G   E +++  EM  RGL
Sbjct: 271 TYNCLIHGYLSIGKWKEVVQMLEEMSARGL 300



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 75/175 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K D+  Y  I+ GLC  +  +++  +   +   GL  N +  T ++ A  K G 
Sbjct: 610 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 669

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L   +  + +   VVT+ ++ + L + G + E    F  M   G  PN  +  A
Sbjct: 670 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 729

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
           L+  L  +  I RA     ++ +R+   + +  + L+  +   E    A +L  +
Sbjct: 730 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSLPEK 784


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 128/249 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K D   + T+I GL + +K  ++  L+  M + G   + V    +++   K G+   AL+
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL++M  ++IE  VV +  +ID LCK     +A++ F  M + G+ PNV  Y++LI  LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                  A  L  +M +R + P+   ++ALID ++K     +A  L   M +  +D ++ 
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+SL+ G      L EA+ +   MI +  LP+ +   +L+    +   +D+ +EL  EM
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419

Query: 247 MGRGLLSGS 255
             RGL+  +
Sbjct: 420 SQRGLVGNT 428



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 112/219 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K ++ ++  Y ++I  LC   ++ D+  LLS+M E  +  N V  + L+DA+ K G+
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L +EM+   I+  + T+  LI+G C    + EA      M      PNV  Y  
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +++   LF EM +R ++ +T  YT LI G+ +      A  +  +M  VG
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  ++  Y  L+ GL + G L +A V+F  +    + PD
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 117/219 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+A++ +Y T+I  LC     +D+  L +EM+  G+  N +  ++L+      G 
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL +M++ +I   +VTF  LID   K G + +A   +  M    + PN+  Y++
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C  + +  A+ + + M ++D +P+   Y  LI+G+ K +   + + L   M++ G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  +   YT+L+ G  +      A+++F +M+  G+ P+
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + DL  YG ++ GLC     + +  LL++M+   + AN VI +T++D+  K   
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L  EM +  +   V+T+  LI  LC  G   +A      M +  ++PN+  ++A
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   KK  + +A  L++EM KR + P+   Y++LI+G+   +   EA  +   M    
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y +L+ G  +   + +   LF EM  RG++ + +   +L+   ++  + D A 
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448

Query: 241 ELQNEMMGRGL 251
            +  +M+  G+
Sbjct: 449 MVFKQMVSVGV 459



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 122/246 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  +L  Y  +I   C  S+   +  LL +M + G   + V   +L++ +      S+A+
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L+D+M++   +   VTF  LI GL       EA+    RM   G  P++  Y A+++GL
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+   + A NL ++M    +  +   Y+ +ID   K+    +ALNL   M   GV  ++
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+SL+  L   G   +A  L  +MI R I P+ +   +L+    ++G + +A +L  E
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348

Query: 246 MMGRGL 251
           M+ R +
Sbjct: 349 MIKRSI 354



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 15/255 (5%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKEN---------------GLTANTVICTTLMDAYF 56
           L+G +       S  E SKLL +  K N               G++ N      L++ + 
Sbjct: 65  LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           +    S AL+LL +M+    E  +VT   L++G C    + +A+    +M + G  P+  
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTV 184

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +T LI GL   N    A  L D M +R   PD   Y A+++G  K      ALNL N+M
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
               ++ ++  Y++++  L +  H  +A  LF EM  +G+ P+ I   SL+      G  
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304

Query: 237 DEAIELQNEMMGRGL 251
            +A  L ++M+ R +
Sbjct: 305 SDASRLLSDMIERKI 319



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 80/167 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  ++  Y ++I G C+  +  ++K +L  M       N V   TL++ + KA  
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + L  EM    +    VT+  LI G  ++     A   F +M   G+HPN+  Y  
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           L+DGLCK   + +A  +F+ + +  M PD   Y  +I+G  K   +K
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 107/227 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + +D+  L   M ++    + +  + L+ A  K  +    +S  ++M    I   + T+ 
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI+  C+   +  A+   G+M   G  P++    +L++G C  N I  A  L D+M + 
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PDT  +T LI G   H    EA+ L +RM + G   DL  Y ++V GL + G    A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L ++M    I  + ++  +++    +  + D+A+ L  EM  +G+
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284



 Score = 45.8 bits (107), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 35/138 (25%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA-- 58
           M  K+   ++  Y T+I G C   + +    L  EM + GL  NTV  TTL+  +F+A  
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443

Query: 59  ---------------------------------GEPSEALSLLDEMLDSRIEVTVVTFCV 85
                                            G+ ++A+ + + +  S +E  + T+ +
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503

Query: 86  LIDGLCKSGLVREAIDYF 103
           +I+G+CK+G  +    YF
Sbjct: 504 MIEGMCKAGKWKMGGIYF 521


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 121/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC       +  L  EM E G+  N    T L++ + K  +  EA  L D+M+
Sbjct: 446 YSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           DS +    VTF V+I+G C  G +R+A   + +M + GL P+   Y +LI GLC  + + 
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A     ++     + +  + TAL+ G  +   F E  +L + M   GV LDL ++T +V
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIV 625

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +   +    +++ VLF EM  +G+ PD+I    ++    +  NM +A+   ++M+  G
Sbjct: 626 YAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDG 683



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +KA    Y  +++GLC   + +++  + + M   G+TA+ V   TL+  + +  E
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +M+      +      +ID L K  LV EA     ++ D G+ PNV  Y A
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK    + A  LF EM  R + P+   Y  LI    K    ++AL L ++M + G
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + + +  Y SL+ G  + G L  AR L   M+  G+ P       L+      G++  A+
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAM 463

Query: 241 ELQNEMMGRGL 251
           EL  EM  RG+
Sbjct: 464 ELHREMAERGI 474



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 116/225 (51%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E++  L  ++ + G+  N      L+D   K     +A  L  EM    +E   VT+ +L
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I  LCK G++ +A+  F +M D G+   V  Y +LI+G CK+  ++RAR L   M K  +
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGL 439

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P   +Y+ LI G  ++     A+ L   M E G+  +   +T+L+ G  +   + EA  
Sbjct: 440 TPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAAR 499

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           LF +MI   ++P+E+    +++ +   GN+ +A +L ++M+  GL
Sbjct: 500 LFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGL 544



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ ++ +   Y  +I  LC     ED+  L  +M++ G+        +L++ Y K G 
Sbjct: 364 MAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS 423

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL  M+   +  T  ++  LI GLC++G +  A++    M + G+  N   +TA
Sbjct: 424 LDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTA 483

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   ++ A  LFD+M   ++IP+   +  +I+GY    + ++A  L ++M E+G
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y SL+ GL     + +A     ++     + +     +LL   +  G   E  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETY 603

Query: 241 ELQNEMMGRGL 251
            L +EM  RG+
Sbjct: 604 HLWDEMAVRGV 614



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 108/215 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC   +F+D+  L  EM   GL  N V    L+ A  K G   +AL L D+M 
Sbjct: 341 YNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMR 400

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I+VTV  +  LI+G CK G +  A      M   GL P  A Y+ LI GLC+   + 
Sbjct: 401 DKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLS 460

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  EM +R +  +   +TALI+G+ K +   EA  L ++M +  V  +   +  ++
Sbjct: 461 SAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI 520

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            G    G++++A  L+ +M+  G+ PD     SL+
Sbjct: 521 EGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + AD   Y T+++G C   + E +  +  +M   G   +   C+ ++D   K     EA 
Sbjct: 264 VTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAF 323

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  ++ D  +   V  +  LID LCK+    +A   F  M   GL PN   Y  LI  L
Sbjct: 324 SLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHAL 383

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  IE A  LFD+M  + +      Y +LI+GY K  S   A  L + M + G+    
Sbjct: 384 CKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTA 443

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            +Y+ L+ GL R G L  A  L  EM  RGI  +     +L+    +   MDEA  L ++
Sbjct: 444 ASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDK 503

Query: 246 MMGRGLL 252
           M+   ++
Sbjct: 504 MIDSNVI 510



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K DL  +  I++    +   E S +L  EMKE G+  + +  T ++DA  K   
Sbjct: 609 MAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEEN 668

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+  D+M+        VT  VLI+ LCKSG +  A      M    + PN   Y  
Sbjct: 669 MIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC 728

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +D    +  +E+A++L   M  +  +    ++  LI G  K    +EA++L  ++TE G
Sbjct: 729 FLDYFATEGDMEKAKDLHSAM-LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESG 787

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D  +Y++++  L + G + +A  L++EM+ +G+ PD +     ++     G  D+A+
Sbjct: 788 FSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKAL 847

Query: 241 ELQNEMMGRGL 251
            +   M+  G+
Sbjct: 848 GIYTNMIRSGV 858



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 123/236 (52%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           I++ L    +F  ++ L  +M ++G+  +  + T  + AY ++     A  L+  M    
Sbjct: 169 ILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG 228

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           ++ + V + VL+ GLCK+  V+EA++    M + G+  +   Y  L+ G C+   +E A 
Sbjct: 229 VKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMAL 288

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            +  +M +   +P     + +ID   K E  +EA +L  ++ ++G+  ++ AY +L+  L
Sbjct: 289 RITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKL 348

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +     +A  LF EM GRG+ P+E+    L+    +RG +++A+ L ++M  +G+
Sbjct: 349 CKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGI 404



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 1/188 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I  LC       ++LL  EM    +  N       +D +   G+  +A  L   ML
Sbjct: 691 HTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAML 750

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  ++V+F +LI GLCK+G ++EAID   ++ + G  P+   Y+ +I  LCK   I 
Sbjct: 751 QGHL-ASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  L++EM  + + PD  AY   I     H    +AL +   M   GV  + + Y +L+
Sbjct: 810 KAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALL 869

Query: 193 WGLSRCGH 200
            G+S   H
Sbjct: 870 SGISLMLH 877



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 9/254 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D  +Y   I   C     + ++ L+  M+  G+ A+ V    LM    K   
Sbjct: 189 MLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMR 248

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + + M++  +    VT+  L+ G C+   +  A+     M   G  P+ A  + 
Sbjct: 249 VQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSF 308

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID L KK  +E A +L  ++    M+P+  AY ALID   K+E F +A  L   M   G
Sbjct: 309 MIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRG 368

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y  L+  L + G +++A  LF +M  +GI        SL+  + ++G++D A 
Sbjct: 369 LEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRA- 427

Query: 241 ELQNEMMGRGLLSG 254
                   RGLLSG
Sbjct: 428 --------RGLLSG 433



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 119/276 (43%), Gaps = 35/276 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I G C + K +++  L  +M ++ +  N V    +++ Y   G   +A  L D+M+
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540

Query: 73  DSRIEVTVVTFCVLIDGLC-----------------------------------KSGLVR 97
           +  ++    T+  LI GLC                                   + G   
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFT 600

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           E    +  M   G+  ++  +T ++    K++  E++  LF EM ++ + PD   YT +I
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D   K E+  +ALN  ++M   G   +   +T L+  L + G+L  A +L  EM+   +L
Sbjct: 661 DALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           P++      L      G+M++A +L + M+   L S
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLAS 756



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 85/181 (46%)

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L S I V   T   ++  L K      A D F +M   G+H +  VYTA I   C+   +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + AR L   M    +      Y  L+ G  K+   +EA+ +KN M  +GV  D   Y +L
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           V+G  R   L+ A  + H+MI  G +P E  C  ++ +  ++  ++EA  L  ++   G+
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 252 L 252
           +
Sbjct: 335 V 335



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 67/148 (45%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+  N    + ++  L K      AR+LFD+M +  +  D   YTA I  Y +  +   A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L  RM   GV      Y  L++GL +   +QEA  + + M+  G+  DE+   +L+  
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGSKN 257
                 ++ A+ + ++M+  G +    N
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEAN 305



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 60/118 (50%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A +  +  +I GLC   K +++  L+ ++ E+G + + +  +T++    K G+ ++A  L
Sbjct: 755 ASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFEL 814

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +EML   ++  VV + + I      G   +A+  +  M   G+ PN   Y AL+ G+
Sbjct: 815 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 126/250 (50%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G     ++ +Y T++ GL  E K  ++  L  EM + G+  N V   +++ A  KA   
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAV 262

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +A  +L +M+ + ++   VT+  LI G    G  ++A+  F  M   G+ PN    +  
Sbjct: 263 DKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTF 322

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +  LCK   IE AR  FD M  +    +  +Y+ L+ GY       +  NL N M   G+
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGI 382

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             + + +  LV G ++CG ++EA  +F +M  RG+ PD +  ++++      G+MD+A++
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMD 442

Query: 242 LQNEMMGRGL 251
             N M+ +G+
Sbjct: 443 KFNHMIDKGV 452



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  Y ++I  LC     + ++ +L +M  NG+  + V   TL+  Y   G+
Sbjct: 237 MTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  EM    +    VT    +  LCK G + EA ++F  M   G   N+  Y+ 
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYST 356

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G     C+    NLF+ M +  ++P+   +  L++GY K    +EA+ +   M + G
Sbjct: 357 LLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG 416

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  Y +++    R G + +A   F+ MI +G+ P+  +   L++     G++ +A 
Sbjct: 417 LNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAE 476

Query: 241 ELQNEMMGRGL 251
           EL  E+  +GL
Sbjct: 477 ELVYEIRNKGL 487



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 115/239 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  ++ D   Y T+I G     +++ +  +  EM   G+  NTV C+T +    K G 
Sbjct: 272 MVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGR 331

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA    D ML    ++ ++++  L+ G   +G + +  + F  M   G+ PN  V+  
Sbjct: 332 IEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNI 391

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G  K   +  A  +F++M KR + PD   Y A+I  + +  S  +A++  N M + G
Sbjct: 392 LVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKG 451

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           V+ +   Y  L+ G    G L +A  L +E+  +G+ P  +   SL+    + G + EA
Sbjct: 452 VEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEA 510



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K ++  Y T++ G        D   L + M  +G+  N  +   L++ Y K G 
Sbjct: 342 MLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGM 401

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + ++M    +   V+T+  +I   C+ G + +A+D F  M D G+ PN AVY  
Sbjct: 402 VREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQC 461

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    + +A  L  E+  + + P   ++ +LI+   K     EA  + + +   G
Sbjct: 462 LIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTG 521

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+N +TSL+ G    G + EA  +   M+  GI PD +   +L+    + G +D+ +
Sbjct: 522 EKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGL 581

Query: 241 ELQNEMMGRGL 251
            L  E++ +G+
Sbjct: 582 ILFRELLHKGV 592



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 3/252 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           + +KAD+ +  +++ GLC   + +++  +L   M E G   + +  +T++ +    G   
Sbjct: 132 QGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQ 191

Query: 63  EALSLLDEMLDSR--IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            AL +L   +         VV +  ++ GL K G V EA D F  M   G+ PNV  Y +
Sbjct: 192 WALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNS 251

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK   +++A+ +  +M    + PD   Y  LI GY     +K+A+ +   MT  G
Sbjct: 252 VIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRG 311

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +    ++ V  L + G ++EAR  F  M+ +G   + I   +LL  +   G + +  
Sbjct: 312 VIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMS 371

Query: 241 ELQNEMMGRGLL 252
            L N M+  G++
Sbjct: 372 NLFNLMVRDGIV 383



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 112/242 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ D+  YGT++ G C   + +D  +L  E+   G+   T     ++D  F AG 
Sbjct: 552 MVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGR 611

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  +  EM++S I VT+ T+ +L+ GLC++    EAI  F ++    +  ++ +   
Sbjct: 612 TAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNI 671

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  + K    E A  LF  +P   ++P    YT +++  +K  S +EA  + + M + G
Sbjct: 672 MISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSG 731

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +    +    +V  L   G + +A +    + G+ IL +      LL     +G   E +
Sbjct: 732 LSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHL 791

Query: 241 EL 242
            L
Sbjct: 792 NL 793



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 108/239 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ +  +Y  +I G C       ++ L+ E++  GL    +   +L++   K G 
Sbjct: 447 MIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGR 506

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + D ++ +  +  V  F  LIDG C  G + EA      M   G+ P++  Y  
Sbjct: 507 VFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGT 566

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK   I+    LF E+  + + P T  Y  ++DG         A  +   M E G
Sbjct: 567 LVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESG 626

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           + + +  Y+ L+ GL R    +EA  +F ++    +  D ++   ++ K ++    +EA
Sbjct: 627 IAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEA 685



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 112/233 (48%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           KAD+ ++ ++I G C+  K  ++  +   M   G+  + V   TL++   K G   + L 
Sbjct: 523 KADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLI 582

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  E+L   ++ T  T+ +++DGL  +G    A + F  M + G+   +  Y+ L+ GLC
Sbjct: 583 LFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLC 642

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           + NC E A  +F ++   ++  D      +I    K    +EA  L   + + G+   + 
Sbjct: 643 RNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQ 702

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            YT ++  L + G ++EA  +F  M+  G+ P       +++   E+G + +A
Sbjct: 703 TYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 116/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + ++I  LC E +  +++ +   +   G  A+  I T+L+D Y   G+ SEA  + D M+
Sbjct: 494 FASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMV 553

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              IE  +VT+  L++G CK+G + + +  F  +   G+ P    Y  ++DGL       
Sbjct: 554 SVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTA 613

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +F EM +  +      Y+ L+ G  ++   +EA+ +  ++  + V  D+     ++
Sbjct: 614 AAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMI 673

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             + +    +EA  LF  +   G++P       +++   + G+++EA  + + M+  GL
Sbjct: 674 SKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGL 732



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 38/240 (15%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY-FGRMP 107
           + L+D   +A     A +    +L   ++  V+    L+ GLC +    EA+D  F RMP
Sbjct: 107 SILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMP 166

Query: 108 DFGLHP-------------------------------------NVAVYTALIDGLCKKNC 130
           + G  P                                     NV VY+ ++ GL K+  
Sbjct: 167 ELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGK 226

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           +  A +LF EM ++ + P+   Y ++I    K  +  +A  +  +M   GV  D   Y +
Sbjct: 227 VGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNT 286

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ G S  G  ++A  +F EM  RG++P+ + C + +    + G ++EA E  + M+ +G
Sbjct: 287 LIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKG 346



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 97/216 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D+  Y  +I   C     +D+    + M + G+  N  +   L+  +   G+
Sbjct: 412 MQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGD 471

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ E+ +  +   +++F  LI+ LCK G V EA   F  +   G   +V ++T+
Sbjct: 472 LVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTS 531

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    +  A  + D M    + PD   Y  L++G  K+    + L L   +   G
Sbjct: 532 LIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKG 591

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           V      Y  ++ GL   G    A+ +F EMI  GI
Sbjct: 592 VKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGI 627



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/235 (20%), Positives = 81/235 (34%), Gaps = 79/235 (33%)

Query: 99  AIDYFGRM-----PDFGLHPNVAVYTALIDGLCK-------------------------- 127
           A+  F RM     P   L P V  Y+ LID  C+                          
Sbjct: 83  AVALFNRMSTGTGPRVAL-PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVV 141

Query: 128 ----------KNCIERARNLFDEMPKRDMIPDTTAY------------------------ 153
                     K   E    LF  MP+   +PD  +Y                        
Sbjct: 142 SSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAV 201

Query: 154 -------------TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
                        + ++ G  K     EA +L + MT+ GV  ++  Y S++  L +   
Sbjct: 202 KQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARA 261

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           + +A+ +  +M+G G+ PD +   +L+  +   G   +A+ +  EM  RG++  +
Sbjct: 262 VDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNT 316


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 122/257 (47%), Gaps = 7/257 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGL-------TANTVICTTLMD 53
           MK + I ++   +G I+  LC     + +    +   E            ++V  T ++D
Sbjct: 55  MKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVD 114

Query: 54  AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
             FKAG     L   ++M+ S+ E T++T+ VL+DGLCK+  V  A D F  M   G  P
Sbjct: 115 GLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKP 174

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           ++  Y++LIDGL K   ++ AR L D M  R   P   AYT+++ G  K    +EA+   
Sbjct: 175 DIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTI 234

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
             M    +   ++ Y+ +V G    G ++EA  +  EM  R   PD I     ++  Y  
Sbjct: 235 QEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSI 294

Query: 234 GNMDEAIELQNEMMGRG 250
           G  +EA ++   M+ +G
Sbjct: 295 GRREEAEKVFETMVEKG 311



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 2/242 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+ G     K E++  ++ EM +     +T+  T  ++A +  G   EA  + + M+
Sbjct: 249 YSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMV 308

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +  + T+ ++ID  CK G +  A      M    + PN  +YT ++DG  K + +E
Sbjct: 309 EKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLE 368

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD--LNAYTS 190
            A  L+  + K  ++P T  Y  +I+   K +   EAL L   M     +L+  +  Y+ 
Sbjct: 369 EALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSM 428

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++ GL + G  + A  L  EMI  G++PD     SL++     G +  A+EL  EM+  G
Sbjct: 429 IIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAG 488

Query: 251 LL 252
           + 
Sbjct: 489 IF 490



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 111/249 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  Y ++I GL    + ++++ L+  M   G     V  T+++    K G 
Sbjct: 167 MIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGR 226

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+  + EM   R+   V T+  ++ G    G V EA      M D    P+   YT 
Sbjct: 227 IQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTM 286

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+ L      E A  +F+ M ++   PD   Y  +ID + K  S   A ++   M +  
Sbjct: 287 FIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAA 346

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   YT ++ G  +   L+EA  L+  ++  GILP  +   +++    +   MDEA+
Sbjct: 347 VKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEAL 406

Query: 241 ELQNEMMGR 249
           EL  EM  R
Sbjct: 407 ELLREMQRR 415



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 113/255 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     +  L  Y  ++ GLC   K E +  +  EM   G   + +  ++L+D   KAG 
Sbjct: 132 MVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGR 191

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+D M+      T V +  ++ GLCK G ++EA+     M    L P V  Y+ 
Sbjct: 192 VDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSF 251

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ G      +E A  + +EM  RD  PDT +YT  I+        +EA  +   M E G
Sbjct: 252 IVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKG 311

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D++ Y  ++    + G +  A  +   M    + P+  +   ++    +   ++EA+
Sbjct: 312 CKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEAL 371

Query: 241 ELQNEMMGRGLLSGS 255
           EL   ++  G+L  +
Sbjct: 372 ELYQRILKDGILPST 386



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 101/223 (45%), Gaps = 3/223 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D+  YG II   C E     +  +L  M +  +  N  I T +MD + K+  
Sbjct: 307 MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSR 366

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG--LHPNVAVY 118
             EAL L   +L   I  + VT+  +I+ LCK   + EA++    M      L P++  Y
Sbjct: 367 LEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTY 426

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +I GL K    ERA +L  EM    +IPD   YT+LI           A+ L   M +
Sbjct: 427 SMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLK 486

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
            G+  D + Y +LV  L R   +  A  L  EM+  G  P+E 
Sbjct: 487 AGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRNGHTPNEF 528



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 7/188 (3%)

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG-------RMPDFGLHPNVAVY 118
           +LL EM    I     T  V++  LC    + +A+ YF        R+ +    P+   Y
Sbjct: 50  ALLREMKARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTY 109

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           TA++DGL K    +     +++M      P    YT L+DG  K    + A ++   M  
Sbjct: 110 TAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIR 169

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G   D+ AY+SL+ GLS+ G + EAR L   MI RG  P  +   S++    + G + E
Sbjct: 170 KGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQE 229

Query: 239 AIELQNEM 246
           A++   EM
Sbjct: 230 AVKTIQEM 237


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 126/244 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  +  +I GLC  ++   +  +   + E     + V    L+++  K+G+ ++A+ L 
Sbjct: 423 DVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELW 482

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            ++ +S+I     T+  +IDG CK+G++  A     +M    L P+V  Y  L+  LCKK
Sbjct: 483 KQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKK 542

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +++A  LF+EM + D  PD  ++  +IDG LK    K A +L   M+  G+  DL  Y
Sbjct: 543 GTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTY 602

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + L+    + G+L EA   F +MI  G  PD  +C S+LK    +G  D+  E   +++ 
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVD 662

Query: 249 RGLL 252
           + ++
Sbjct: 663 KDVV 666



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 121/237 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC   +F  +  LL EM++N L  + V   T++  + +  E  +AL L +EM 
Sbjct: 145 YNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQ 204

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S    ++VT+ +LID  CK+G + EA+     M   GL  ++ VYT+LI G C    ++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELD 264

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           R + LFDE+ +R   P    Y  LI G+ K    KEA  +   M E GV  ++  YT L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLI 324

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            GL   G  +EA  L + M+ +   P+ +    ++ K  +   + +A+E+   M  R
Sbjct: 325 DGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKR 381



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 104/212 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G      L  +G +I   C   K +++  LL EMK  GL A+ ++ T+L+  +   GE
Sbjct: 203 MQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGE 262

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +L DE+L+       +T+  LI G CK G ++EA + F  M + G+ PNV  YT 
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTG 322

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLC     + A  L + M ++D  P+   Y  +I+   K     +AL +   M +  
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRR 382

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
              D   Y SL+ GL   G L EA  L + M+
Sbjct: 383 TRPDNITYNSLLGGLCAKGDLDEASKLLYLML 414



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 118/242 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  ++  D+  Y T+I G C   + E +  L +EM+ +G + + V    L+DA+ KAG+
Sbjct: 168 MRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGK 227

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL EM    +E  ++ +  LI G C  G +      F  + + G  P    Y  
Sbjct: 228 MDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++ A  +F+ M +R + P+   YT LIDG       KEAL L N M +  
Sbjct: 288 LIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKD 347

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + ++  Y  ++  L +   + +A  +   M  R   PD I   SLL     +G++DEA 
Sbjct: 348 EEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEAS 407

Query: 241 EL 242
           +L
Sbjct: 408 KL 409



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 100/217 (46%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           +M E     N V  + L++ + +  +   A  +L  ML       V  + +L+ GLC++ 
Sbjct: 97  KMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNL 156

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
              +A+     M    L P+V  Y  +I G C+   +E+A  L +EM           + 
Sbjct: 157 EFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWG 216

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LID + K     EA+ L   M   G++ DL  YTSL+ G   CG L   + LF E++ R
Sbjct: 217 ILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  P  I   +L++   + G + EA E+   MM RG+
Sbjct: 277 GDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGV 313



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 119/271 (43%), Gaps = 37/271 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C   + +++  +   M E G+  N    T L+D     G+  EAL LL+ ML
Sbjct: 285 YNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLML 344

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF--------GL------- 111
               E  VVT+ ++I+ LCK  LV +A++    M      PD         GL       
Sbjct: 345 QKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLD 404

Query: 112 ----------------HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
                            P+V  + ALI GLCK N + +A +++D + ++    D      
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNI 464

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L++  LK     +A+ L  +++   +  + + YT+++ G  + G L  A+ L  +M    
Sbjct: 465 LLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSE 524

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           + P       LL    ++G +D+A  L  EM
Sbjct: 525 LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEM 555



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 97/218 (44%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+ M + G   N      L+    +  E  +A+SLL EM  + +   VV++  +I G C
Sbjct: 129 VLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFC 188

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           +   + +A+     M   G   ++  +  LID  CK   ++ A  L  EM  + +  D  
Sbjct: 189 EGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLI 248

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT+LI G+           L + + E G       Y +L+ G  + G L+EA  +F  M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFM 308

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           + RG+ P+      L+      G   EA++L N M+ +
Sbjct: 309 MERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQK 346



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 1/212 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  ++  + +  N+   TT++D + K G  + A  LL +M  S +  +V  +  L+  LC
Sbjct: 481 LWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLC 540

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G + +A   F  M      P+V  +  +IDG  K   I+ A +L   M    + PD  
Sbjct: 541 KKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLF 600

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ LI+ +LK     EA++  ++M + G + D +   S++      G   +      ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKL 660

Query: 212 IGRGILPD-EILCISLLKKHYERGNMDEAIEL 242
           + + ++ D E+ C  +       GNMD A  L
Sbjct: 661 VDKDVVLDKELTCTVMDYMCSSSGNMDIAKRL 692



 Score = 50.4 bits (119), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 66/146 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC +   + +  L  EM+ +    + +    ++D   KAG+   A SLL  M 
Sbjct: 532 YNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMS 591

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + +   + T+  LI+   K G + EAI +F +M D G  P+  +  +++     +   +
Sbjct: 592 HAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETD 651

Query: 133 RARNLFDEMPKRDMIPDTTAYTALID 158
           +      ++  +D++ D      ++D
Sbjct: 652 KLTEFVKKLVDKDVVLDKELTCTVMD 677



 Score = 41.6 bits (96), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 1/155 (0%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           ++ A+  F +  D G   + A    L+  L +    E A + + +M + D   +  + + 
Sbjct: 54  LKNAVSVFQQAVDSGGSLSFA-GNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSG 112

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L++ +++      A  +   M + G   ++  Y  L+ GL R     +A  L  EM    
Sbjct: 113 LLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNS 172

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++PD +   ++++   E   +++A++L NEM G G
Sbjct: 173 LMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSG 207


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 16/263 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y  +I  LC  SK +++ LL  EMK N +  +    T L+D++ K G 
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A    DEM+       VVT+  LI    K+  +  A + F  M   G  PNV  YTA
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590

Query: 121 LIDGLCKKNCIERARNLFDEM------PKRDMI----------PDTTAYTALIDGYLKHE 164
           LIDG CK   IE+A  ++  M      P  DM           P+   Y AL+DG  K  
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH 650

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             KEA +L + M+  G + +   Y +L+ G  + G L EA+++F +M  RG  P+     
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710

Query: 225 SLLKKHYERGNMDEAIELQNEMM 247
           SL+ + ++   +D A+++ + M+
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRML 733



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 126/301 (41%), Gaps = 51/301 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  ++  D+  Y  +I   C     + ++    EM  +G   N V  T L+ AY KA +
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF----- 109
            S A  L + ML       VVT+  LIDG CKSG + +A   + RM      PD      
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 110 ----------------------------------------GLHPNVAVYTALIDGLCKKN 129
                                                   G  PN  VY ALIDG CK  
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++ A+ +F +M +R   P+   Y++LID   K +    AL + +RM E     ++  YT
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            ++ GL + G   EA  L   M  +G  P+ +   +++    + G +D+ +EL  +M  +
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805

Query: 250 G 250
           G
Sbjct: 806 G 806



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 16/247 (6%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           LC   KFE +  ++ EM   G   +T   + ++     A +   A  L +EM  + +   
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V T+ +LID  CK GL+++A  +F  M   G  PNV  YTALI    K   +  A  LF+
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM------TEVGV----------DL 183
            M     IP+   YTALIDG+ K    ++A  +  RM       +V +          D 
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y +LV GL +   ++EAR L   M   G  P+ I+  +L+    + G +DEA  + 
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 244 NEMMGRG 250
            +M  RG
Sbjct: 695 TKMSERG 701



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 93/199 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG ++ GLC   K ++++ LL  M   G   N ++   L+D + K G+  EA  +  +M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      V T+  LID L K   +  A+    RM +    PNV +YT +IDGLCK    +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M ++   P+   YTA+IDG+ K     + L L  +M   G   +   Y  L+
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 193 WGLSRCGHLQEARVLFHEM 211
                 G L +A  L  EM
Sbjct: 819 NHCCAAGLLDDAHQLLDEM 837



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 88/186 (47%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K ++++++ ++M E G   N    ++L+D  FK      AL +L  M
Sbjct: 673 VYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L++     V+ +  +IDGLCK G   EA      M + G HPNV  YTA+IDG  K   +
Sbjct: 733 LENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKV 792

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           ++   L  +M  +   P+   Y  LI+         +A  L + M +      +  Y  +
Sbjct: 793 DKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKV 852

Query: 192 VWGLSR 197
           + G +R
Sbjct: 853 IEGFNR 858



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 109/250 (43%), Gaps = 16/250 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENG----------------LTANTVICTTLMDAYF 56
           Y  +I G C   + E +  + + M+ N                    N      L+D   
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           KA +  EA  LLD M     E   + +  LIDG CK G + EA   F +M + G  PNV 
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y++LID L K   ++ A  +   M +    P+   YT +IDG  K     EA  L + M
Sbjct: 708 TYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMM 767

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G   ++  YT+++ G  + G + +   L  +M  +G  P+ +    L+      G +
Sbjct: 768 EEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLL 827

Query: 237 DEAIELQNEM 246
           D+A +L +EM
Sbjct: 828 DDAHQLLDEM 837



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 6/214 (2%)

Query: 12  LYGTIIWGLCIESKFEDSKLL------LSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +Y  +I G+C   K     +L        EM +  +  N V  + L      AG+  +A 
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S++ EM+         T+  +I  LC +  V  A   F  M    + P+V  YT LID  
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +++AR  FDEM +    P+   YTALI  YLK      A  L   M   G   ++
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             YT+L+ G  + G +++A  ++  M G   +PD
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPD 619



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 8/221 (3%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I GLC   K +++  L+S M+E G   N V  T ++D + KAG+  + L L+ +M
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
                    VT+ VLI+  C +GL+ +A      M       ++A Y  +I+G  ++  I
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII 862

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV----GVDLDLNA 187
             +  L DE+ +   +P   AY  LID + K    + AL L   M+        D DL  
Sbjct: 863 --SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDL-- 918

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           Y+SL+  LS    + +A  L+ +MI RG +P+  +   L+K
Sbjct: 919 YSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVK 959



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 8/244 (3%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD-- 69
           ++ ++I   C    +  +  LL +M + G     V+   L+       E   +L +L+  
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG-ICGNEKLPSLDVLELA 429

Query: 70  -----EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
                EMLD+ + +  V    L   LC +G   +A      M   G  P+ + Y+ +I  
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC  + ++ A  LF+EM    ++PD   YT LID + K    ++A    + M   G   +
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  YT+L+    +   +  A  LF  M+  G +P+ +   +L+  H + G +++A ++  
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609

Query: 245 EMMG 248
            M G
Sbjct: 610 RMRG 613



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 119/293 (40%), Gaps = 41/293 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTV-------------- 46
           ++ +  K D  +Y  +I GLC  S FE++   LS M+ +    N V              
Sbjct: 290 IEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQ 349

Query: 47  ---------------------ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                                I  +L+ AY ++G+ S A  LL +M D   +   V + +
Sbjct: 350 LGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNI 409

Query: 86  LIDGLCKS------GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           LI G+C +       ++  A   +G M D  +  N    + L   LC     E+A ++  
Sbjct: 410 LIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIR 469

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM  +  IPDT+ Y+ +I           A  L   M    V  D+  YT L+    + G
Sbjct: 470 EMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVG 529

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            LQ+AR  F EM+  G  P+ +   +L+  + +   M  A EL   M+  G +
Sbjct: 530 LLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCI 582



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 104/236 (44%), Gaps = 13/236 (5%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + + + L+  EM ++G   +       +    KAG   EAL+L+++      ++  V + 
Sbjct: 247 RLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYT 303

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            +I GLC++ L  EA+D+  RM      PNV  Y  L+ G  +K  + R + +   M   
Sbjct: 304 QMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE 363

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH---- 200
              P    + +LI  Y +   +  A  L  +M + G       Y  L+ G+  CG+    
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGI--CGNEKLP 421

Query: 201 ----LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               L+ A   + EM+   ++ +++   +L +     G  ++A  +  EMM +G +
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 17  IWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           +W + +E         L  +K+ G   + +    L+  + +A     A  +  EM DS  
Sbjct: 212 LWNVALEE--------LGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF 263

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
            +   T    +  LCK+G  REA+    +  +F L  +  +YT +I GLC+ +  E A +
Sbjct: 264 NMDGYTLGCFVHLLCKAGRWREALALIEK-EEFKL--DTVIYTQMISGLCEASLFEEAMD 320

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
               M     IP+   Y  L+ G L+         + + M   G       + SL+    
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380

Query: 197 RCGHLQEARVLFHEMIGRGILPDEIL 222
           R G    A  L  +M   G  P  ++
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVV 406



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 83/224 (37%), Gaps = 38/224 (16%)

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI--- 122
             L E+ D   E+      VLI   C++GL   A++  GR+ D G  P+   Y AL+   
Sbjct: 183 QFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVF 242

Query: 123 -----------------------DG---------LCKKNCIERARNLFDEMPKRDMIPDT 150
                                  DG         LCK     R R     + K +   DT
Sbjct: 243 LEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDT 299

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             YT +I G  +   F+EA++  +RM       ++  Y  L+ G  R   L   + +   
Sbjct: 300 VIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSM 359

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           MI  G  P   +  SL+  +   G+   A +L  +M   G   G
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 134/292 (45%), Gaps = 51/292 (17%)

Query: 1   MKGKNIKADLPLYGTIIWGLC----IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYF 56
           MK + +K D+ L+ T+I GLC    I+   E  K +  E   N +T NTV+     +   
Sbjct: 25  MKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVV-----NGLC 79

Query: 57  KAGEPSEALSLLDEMLDSRIEVT------VVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           KA    E L L D+M + R E +      V+++  +ID LCK+  V +A +YF RM   G
Sbjct: 80  KANRIDEGLELFDDM-EKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVG 138

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PNV  Y++LIDGLCK + ++ A +L  ++   DM+P    Y A+++G+ +     E L
Sbjct: 139 CAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECL 198

Query: 171 NLKNRMTEVGVD---LDLNAYTSLVW--------------------------------GL 195
            L   M E G     +D NA    +W                                GL
Sbjct: 199 ELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGL 258

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            + G + EA  +  EM+   + PD I   S++    + G MD+A ++   MM
Sbjct: 259 CKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM 310



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 6/208 (2%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           TT+++ + KAG+  +A  LLDEM +  +++ V+    LI GLC+ G + EA++ F  M +
Sbjct: 3   TTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE 62

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR-----DMIPDTTAYTALIDGYLKH 163
               PNV  Y  +++GLCK N I+    LFD+M KR        PD  +Y+ +ID   K 
Sbjct: 63  -ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKA 121

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
           +   +A     RM  VG   ++  Y+SL+ GL +   + EA  L  ++ G  ++P  +  
Sbjct: 122 QRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYY 181

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +++     +G   E +EL   M  +G 
Sbjct: 182 NAVVNGFKRQGKPSECLELLLHMKEKGF 209



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 115/246 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KG+++      Y  ++ G   + K  +   LL  MKE G   N +    ++ A +K  E
Sbjct: 169 LKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDE 228

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A    + +L S  +  VVT+ V + GLCK+G V EA      M +  + P+V  Y++
Sbjct: 229 QEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSS 288

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG CK   +++A ++F  M   + IP    +  L+ G+ +H+  +EA  +   M   G
Sbjct: 289 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAG 348

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L  Y  L+  +     ++ A  ++H+M  +   PD      L++       +DEA 
Sbjct: 349 FIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAK 408

Query: 241 ELQNEM 246
           E  + M
Sbjct: 409 EFLDVM 414



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 109/239 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K    ++  +  ++  L    + E +      + ++G   N V     +    KAG+
Sbjct: 204 MKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGK 263

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L EM++S++   V+T+  +IDG CK+G + +A D F RM      P+   +  
Sbjct: 264 VDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMT 323

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G  +      A  + ++M     IP    Y  L+D     +S + AL + ++M    
Sbjct: 324 LLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKK 383

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
              D N Y  L+  L R   + EA+     M    ++P+  +C +L++   ++G +DEA
Sbjct: 384 RQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEA 442



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/218 (24%), Positives = 103/218 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      ++  Y ++I GLC   + +++  LL ++K   +    +    +++ + + G+
Sbjct: 134 MRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGK 193

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           PSE L LL  M +    + ++ F  ++  L K+    +A  +F R+   G  PNV  Y  
Sbjct: 194 PSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNV 253

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            + GLCK   ++ A  +  EM +  + PD   Y+++IDG+ K     +A ++  RM    
Sbjct: 254 AVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHE 313

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
                  + +L+ G S     +EA  +  +M+  G +P
Sbjct: 314 CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIP 351



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 106/246 (43%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I  LC   + + +      M+  G   N V  ++L+D   K     EA SLL
Sbjct: 107 DVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLL 166

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            ++    +    + +  +++G  + G   E ++    M + G   N+  + A++  L K 
Sbjct: 167 MQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKN 226

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           +  E+A   F+ + K    P+   Y   + G  K     EA  +   M E  V  D+  Y
Sbjct: 227 DEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITY 286

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           +S++ G  + G + +A  +F  M+    +P  +  ++LL    E     EA  +  +M+ 
Sbjct: 287 SSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN 346

Query: 249 RGLLSG 254
            G + G
Sbjct: 347 AGFIPG 352



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 111/254 (43%), Gaps = 16/254 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y +II G C   + + +  + + M  +    + V   TL+  + +  +
Sbjct: 274 MVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKK 333

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + ++M+++     + T+ VL+D +C +  V  A++ + +M      P+   Y  
Sbjct: 334 SREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAP 393

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC+   ++ A+   D M   +++P+     AL++   K     EA ++ + + E+ 
Sbjct: 394 LIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEI- 452

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                           + G   EA  +  +M+ +G+ PDE   +++L+       +D AI
Sbjct: 453 ---------------CKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAI 497

Query: 241 ELQNEMMGRGLLSG 254
               +M  RG   G
Sbjct: 498 AEFEKMASRGCAPG 511



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 16/200 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K  + D   Y  +I  LC   + +++K  L  M+ + +  N  IC  L++   K GE
Sbjct: 379 MKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGE 438

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S+LD +++                +CK+G   EA++   +M   G+ P+ A Y A
Sbjct: 439 VDEACSVLDNVVE----------------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVA 482

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LC  + ++ A   F++M  R   P    YT LI      +   +A  +   M   G
Sbjct: 483 VLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAG 542

Query: 181 VDLDLNAYTSLVWGLSRCGH 200
                    +L   L   G+
Sbjct: 543 FTPQAQTMRTLSSCLRDAGY 562



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/225 (21%), Positives = 85/225 (37%), Gaps = 19/225 (8%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ G     K  ++  +  +M   G          LMD    A     AL +  +M 
Sbjct: 321 FMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMK 380

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             + +    T+  LI  LC++  V EA ++   M    + PN A+  AL++ LCK+  ++
Sbjct: 381 RKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVD 440

Query: 133 RARNLFD-------------------EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
            A ++ D                   +M  + + PD   Y A++      +    A+   
Sbjct: 441 EACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEF 500

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
            +M   G    L  YT L+          +A  +F  M+  G  P
Sbjct: 501 EKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTP 545



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 6/139 (4%)

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +YT +I+G CK   +++A  L DEM +R +  D   ++ LI G  +     EAL     M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-----GILPDEILCISLLKKHY 231
            E     ++  Y ++V GL +   + E   LF +M  R     G  PD I   +++    
Sbjct: 61  GE-ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 232 ERGNMDEAIELQNEMMGRG 250
           +   +D+A E    M   G
Sbjct: 120 KAQRVDKAYEYFKRMRAVG 138


>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 418

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI    +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G LP+ +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVV 417



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 118/221 (53%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L S M+ +G+  +    + L++   K  +  +A +L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+  L + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G L
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYL 413



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM  + K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 118/244 (48%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A L  +  ++   C   +   ++ +   + + GL  + V   TLM+ Y K G+  E   L
Sbjct: 134 ASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRL 193

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
              M  S ++  V T+ VLI+GLCK   + +A   F  M D GL PN   +T LIDG CK
Sbjct: 194 KSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              ++ A  ++ +M  + ++PD   Y  LI G  K    K+A +L + M+  G+  D   
Sbjct: 254 NGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+L+ G  + G L+ A      MI   I  D++   +L+    + G   +A ++  EM+
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREML 373

Query: 248 GRGL 251
             GL
Sbjct: 374 SVGL 377



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 103/210 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +I+ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+   CK   I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   GV  D+  Y+ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 IGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +L+  H + G +D A+E+  +M+ + LL
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLL 273


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 16/263 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y  +I  LC  SK +++ LL  EMK N +  +    T L+D++ K G 
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A    DEM+       VVT+  LI    K+  +  A + F  M   G  PNV  YTA
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590

Query: 121 LIDGLCKKNCIERARNLFDEM------PKRDMI----------PDTTAYTALIDGYLKHE 164
           LIDG CK   IE+A  ++  M      P  DM           P+   Y AL+DG  K  
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH 650

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             KEA +L + M+  G + +   Y +L+ G  + G L EA+++F +M  RG  P+     
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710

Query: 225 SLLKKHYERGNMDEAIELQNEMM 247
           SL+ + ++   +D A+++ + M+
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRML 733



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 126/301 (41%), Gaps = 51/301 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  ++  D+  Y  +I   C     + ++    EM  +G   N V  T L+ AY KA +
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF----- 109
            S A  L + ML       VVT+  LIDG CKSG + +A   + RM      PD      
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 110 ----------------------------------------GLHPNVAVYTALIDGLCKKN 129
                                                   G  PN  VY ALIDG CK  
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++ A+ +F +M +R   P+   Y++LID   K +    AL + +RM E     ++  YT
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            ++ GL + G   EA  L   M  +G  P+ +   +++    + G +D+ +EL  +M  +
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805

Query: 250 G 250
           G
Sbjct: 806 G 806



 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 16/247 (6%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           LC   KFE +  ++ EM   G   +T   + ++     A +   A  L +EM  + +   
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V T+ +LID  CK GL+++A  +F  M   G  PNV  YTALI    K   +  A  LF+
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM------TEVGV----------DL 183
            M     IP+   YTALIDG+ K    ++A  +  RM       +V +          D 
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y +LV GL +   ++EAR L   M   G  P+ I+  +L+    + G +DEA  + 
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 244 NEMMGRG 250
            +M  RG
Sbjct: 695 TKMSERG 701



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 93/199 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG ++ GLC   K ++++ LL  M   G   N ++   L+D + K G+  EA  +  +M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      V T+  LID L K   +  A+    RM +    PNV +YT +IDGLCK    +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M ++   P+   YTA+IDG+ K     + L L  +M   G   +   Y  L+
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 193 WGLSRCGHLQEARVLFHEM 211
                 G L +A  L  EM
Sbjct: 819 NHCCAAGLLDDAHQLLDEM 837



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 14/241 (5%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K ++++++ ++M E G   N    ++L+D  FK      AL +L  M
Sbjct: 673 VYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L++     V+ +  +IDGLCK G   EA      M + G HPNV  YTA+IDG  K   +
Sbjct: 733 LENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKV 792

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           ++   L  +M  +   P+   Y  LI+         +A  L + M +      +  Y  +
Sbjct: 793 DKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKV 852

Query: 192 VWGLSR-----CGHLQEARVLFHEMIGRGILPD-EILCISLLKKHYERGNMDEAIELQNE 245
           + G +R      G L E      E +   I+P   IL  S  K     G ++ A+EL  E
Sbjct: 853 IEGFNREFIISLGLLDE----IAENVAVPIIPAYRILIDSFCKA----GRLELALELHKE 904

Query: 246 M 246
           M
Sbjct: 905 M 905



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 109/250 (43%), Gaps = 16/250 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENG----------------LTANTVICTTLMDAYF 56
           Y  +I G C   + E +  + + M+ N                    N      L+D   
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           KA +  EA  LLD M     E   + +  LIDG CK G + EA   F +M + G  PNV 
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y++LID L K   ++ A  +   M +    P+   YT +IDG  K     EA  L + M
Sbjct: 708 TYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMM 767

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G   ++  YT+++ G  + G + +   L  +M  +G  P+ +    L+      G +
Sbjct: 768 EEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLL 827

Query: 237 DEAIELQNEM 246
           D+A +L +EM
Sbjct: 828 DDAHQLLDEM 837



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 6/214 (2%)

Query: 12  LYGTIIWGLCIESKFEDSKLL------LSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +Y  +I G+C   K     +L        EM +  +  N V  + L      AG+  +A 
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S++ EM+         T+  +I  LC +  V  A   F  M    + P+V  YT LID  
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +++AR  FDEM +    P+   YTALI  YLK      A  L   M   G   ++
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             YT+L+ G  + G +++A  ++  M G   +PD
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPD 619



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 116/237 (48%), Gaps = 8/237 (3%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I GLC   K +++  L+S M+E G   N V  T ++D + KAG+  + L L+ +M
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
                    VT+ VLI+  C +GL+ +A      M       ++A Y  +I+G  ++  I
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII 862

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV----GVDLDLNA 187
             +  L DE+ +   +P   AY  LID + K    + AL L   M+        D DL  
Sbjct: 863 --SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDL-- 918

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           Y+SL+  LS    + +A  L+ +MI RG +P+  +   L+K        +EA++L +
Sbjct: 919 YSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 8/244 (3%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD-- 69
           ++ ++I   C    +  +  LL +M + G     V+   L+       E   +L +L+  
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG-ICGNEKLPSLDVLELA 429

Query: 70  -----EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
                EMLD+ + +  V    L   LC +G   +A      M   G  P+ + Y+ +I  
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC  + ++ A  LF+EM    ++PD   YT LID + K    ++A    + M   G   +
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  YT+L+    +   +  A  LF  M+  G +P+ +   +L+  H + G +++A ++  
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609

Query: 245 EMMG 248
            M G
Sbjct: 610 RMRG 613



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 119/293 (40%), Gaps = 41/293 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTV-------------- 46
           ++ +  K D  +Y  +I GLC  S FE++   LS M+ +    N V              
Sbjct: 290 IEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQ 349

Query: 47  ---------------------ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                                I  +L+ AY ++G+ S A  LL +M D   +   V + +
Sbjct: 350 LGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNI 409

Query: 86  LIDGLCKS------GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           LI G+C +       ++  A   +G M D  +  N    + L   LC     E+A ++  
Sbjct: 410 LIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIR 469

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM  +  IPDT+ Y+ +I           A  L   M    V  D+  YT L+    + G
Sbjct: 470 EMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVG 529

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            LQ+AR  F EM+  G  P+ +   +L+  + +   M  A EL   M+  G +
Sbjct: 530 LLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCI 582



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 104/236 (44%), Gaps = 13/236 (5%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + + + L+  EM ++G   +       +    KAG   EAL+L+++      ++  V + 
Sbjct: 247 RLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYT 303

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            +I GLC++ L  EA+D+  RM      PNV  Y  L+ G  +K  + R + +   M   
Sbjct: 304 QMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE 363

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH---- 200
              P    + +LI  Y +   +  A  L  +M + G       Y  L+ G+  CG+    
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGI--CGNEKLP 421

Query: 201 ----LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               L+ A   + EM+   ++ +++   +L +     G  ++A  +  EMM +G +
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 3/190 (1%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
           L  +K+ G   + +    L+  + +A     A  +  EM DS   +   T    +  LCK
Sbjct: 220 LGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCK 279

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           +G  REA+    +  +F L  +  +YT +I GLC+ +  E A +    M     IP+   
Sbjct: 280 AGRWREALALIEK-EEFKL--DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVT 336

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y  L+ G L+         + + M   G       + SL+    R G    A  L  +M 
Sbjct: 337 YRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMG 396

Query: 213 GRGILPDEIL 222
             G  P  ++
Sbjct: 397 DCGCQPGYVV 406



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 83/224 (37%), Gaps = 38/224 (16%)

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI--- 122
             L E+ D   E+      VLI   C++GL   A++  GR+ D G  P+   Y AL+   
Sbjct: 183 QFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVF 242

Query: 123 -----------------------DG---------LCKKNCIERARNLFDEMPKRDMIPDT 150
                                  DG         LCK     R R     + K +   DT
Sbjct: 243 LEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDT 299

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             YT +I G  +   F+EA++  +RM       ++  Y  L+ G  R   L   + +   
Sbjct: 300 VIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSM 359

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           MI  G  P   +  SL+  +   G+   A +L  +M   G   G
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN   D+  Y T++ GLC E + +++  LL EM+  G   N V    L+DA  K G+
Sbjct: 224 MPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGD 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  L+D M         VT+  LI GLC  G + +A+    +M      PN   Y  
Sbjct: 284 LSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGT 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GL K+   E   ++   M +R    +   Y++LI G  K    + A+ L   M E G
Sbjct: 344 IINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y + + GL R     EA  +  EM+ +G LP+     SL+K  +++G+  +AI
Sbjct: 404 CKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAI 463

Query: 241 ELQNEMMGRGL 251
            +  EMM + +
Sbjct: 464 LVWKEMMSQDM 474



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 118/240 (49%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGTII GL  + + ED   +L  M+E G  AN  I ++L+   FK G+   A+ L  EM 
Sbjct: 341 YGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMA 400

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +  VV +   IDGLC+     EA D    M   G  PN   Y++L+ G  KK   +
Sbjct: 401 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 460

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  ++ EM  +DM  +    + L++G  +    +EAL +   M   G+  D+ AY+S++
Sbjct: 461 KAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMI 520

Query: 193 WGLSRCGHLQEARVLFHEMIGR--GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL   G + +   LF+EM  +     PD +    L      + N+  AI+L N M+  G
Sbjct: 521 KGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEG 580



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 7/219 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K ++ +YG  I GLC + K ++++ +L EM   G   N    ++LM  +FK G+
Sbjct: 399 MAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGD 458

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  EM+   +   VV   VL++GLC+SG +REA+  +  M   GL P+V  Y++
Sbjct: 459 SQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSS 518

Query: 121 LIDGLCKKNCIERARNLFDEM----PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +I GLC    +++   LF EM    PK    PD   Y  L +   + ++   A++L N M
Sbjct: 519 MIKGLCDVGSVDKGLKLFYEMQCQEPKSR--PDVVTYNILFNALCRQDNLTRAIDLLNSM 576

Query: 177 TEVGVDLD-LNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            + G D D L     L     R    Q+ R+   E++ R
Sbjct: 577 LDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVR 615



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 118/234 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC++ K + +  LL +M  +    N V   T+++   K     + + +L  M 
Sbjct: 306 YNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSME 365

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +     +  LI GL K G    A+  +  M + G  PNV VY A IDGLC+    +
Sbjct: 366 ERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPD 425

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A ++  EM  +  +P+   Y++L+ G+ K    ++A+ +   M    +  ++   + L+
Sbjct: 426 EAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLL 485

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            GL   G L+EA  ++  M+G G+ PD +   S++K   + G++D+ ++L  EM
Sbjct: 486 NGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEM 539



 Score =  100 bits (249), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 116/253 (45%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K  + +L  Y  II  LC   + + +     EM       +    +TLM+   K     
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA+ LLDEM         VTF VLID L K+G +  A      M   G  PN   Y  LI
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 310

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GLC K  +++A +L ++M     +P+   Y  +I+G +K    ++ +++   M E G  
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQK 370

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +   Y+SL+ GL + G  + A  L+ EM  +G  P+ ++  + +         DEA ++
Sbjct: 371 ANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDI 430

Query: 243 QNEMMGRGLLSGS 255
             EM+ +G L  +
Sbjct: 431 LQEMLSKGFLPNA 443



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 39/237 (16%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP--- 107
           L++ Y  + E      +LD M      +T   F ++     K+ L  EA+++F RM    
Sbjct: 95  LIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDL 154

Query: 108 --------------------DF----------------GLHPNVAVYTALIDGLCKKNCI 131
                               DF                G  PN+  Y  +I  LCK   I
Sbjct: 155 HCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQI 214

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +RA + F EMP ++  PD   Y+ L++G  K     EA+ L + M   G   +   +  L
Sbjct: 215 DRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVL 274

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           +  LS+ G L  A  L   M  +G +P+E+   +L+     +G +D+A+ L  +M+ 
Sbjct: 275 IDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVS 331


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 4/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ K+ K D+  +  II G C   +  ++  +L  +   G   N V  TTL+D + K+G 
Sbjct: 166 VEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN 225

Query: 61  PSEALSLLDEMLDSR---IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            SEAL L  ++L SR    E  VVTF  LI GLCK+  +  A +   +M    L  +   
Sbjct: 226 LSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFT 284

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           YT L+DGLCK+        +F+EM +    P    YT L+  + K  S ++A  +   M 
Sbjct: 285 YTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMV 344

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
             G+  D+  YT L+ GL   G ++ A   F +++     P  ++  +L++   +   +D
Sbjct: 345 AKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVD 404

Query: 238 EAIELQNEMMGRGL 251
           EA++   EM+ R L
Sbjct: 405 EAVKYYVEMLDRRL 418



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 5/242 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II   C   + + ++ LL E   +  +++ +  T++   + KA    EA  LL +M+
Sbjct: 109 YTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMV 166

Query: 73  DSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           + +  +  +V + V+I G CK+G VREA +    +   G  PN   YT LIDG CK   +
Sbjct: 167 EKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNL 226

Query: 132 ERARNLFDEMPKRD--MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
             A  LF  +  RD    P+   + ALI G  K +  + A  L  +M    +  D   YT
Sbjct: 227 SEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYT 286

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +L+ GL + G   E   +F EM+  G  P  +   +L+  H + G++ +A ++   M+ +
Sbjct: 287 TLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK 346

Query: 250 GL 251
           G+
Sbjct: 347 GI 348



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 84/163 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK ++++AD   Y T++ GLC + +  +   +  EM   G   + V  TTL+ A+ KAG 
Sbjct: 273 MKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  ++  M+   I   V T+ VL++GL ++G VR A ++F ++      P   VY+A
Sbjct: 333 LQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSA 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
           L+ G CK   ++ A   + EM  R + PD      L++   K 
Sbjct: 393 LVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 116/239 (48%), Gaps = 7/239 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC   +  ++    ++M E     N      L+ +  +AG+  +A+++   + 
Sbjct: 6   FSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGI- 64

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYTALIDGLCKKNCI 131
             +   +V+T  +LI+G C+  L+ +A++ F  M  +F L P    YTA+I   CK + +
Sbjct: 65  --QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE-VGVDLDLNAYTS 190
           ++AR L +E        D  A T++  G+ K +   EA  L   M E      D+ A+  
Sbjct: 123 DQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           ++ G  + G ++EA  +   ++  G +P+ +   +L+    + GN+ EA++L   +  R
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239



 Score = 37.4 bits (85), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 4/134 (2%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           PN   ++ LI GLCK   +  A   +++M +R  +P+      L+    +     +A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLLKKHY 231
              +      + LN    L+ G      L +A  LFHEM     ++P+     +++K + 
Sbjct: 61  FRGIQCSPSVITLNI---LINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 232 ERGNMDEAIELQNE 245
           +   +D+A +L  E
Sbjct: 118 KMDRLDQARQLLEE 131


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 123/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K D+  Y T+I  LC   K +D+    ++M + G+  +      L+  +   G 
Sbjct: 420 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 479

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ E++++ + + +V F  +I+ LCK G V +A + F    + GLHP+  VY+ 
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 539

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C    +E+A  +FD M    + P+   Y  L++GY K     E L+L   M + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 599

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y+ ++ GL + G    A+V FHEM   GI  D      +L+  ++    DEAI
Sbjct: 600 IKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 659

Query: 241 ELQNEM 246
            L  E+
Sbjct: 660 FLFKEL 665



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  DL  Y +++  LC     + ++  L +M    +  N      L+  Y   G+
Sbjct: 245 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 304

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM    I   VVT  +L+  LCK G ++EA D F  M   G +P+V  Y  
Sbjct: 305 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G   K C+    +LFD M    + PD   +  LI  Y       +A+ + N M + G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y +++  L R G + +A   F++MI +G+ PD+     L++     G++ +A 
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 484

Query: 241 ELQNEMMGRGL 251
           EL +E+M  G+
Sbjct: 485 ELISEIMNNGM 495



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G   E     +  L  EM + G+  + V   +++ A  KA    +A + L +M+
Sbjct: 222 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 281

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + R+     T+  LI G   +G  +EA+  F  M    + P+V   + L+  LCK   I+
Sbjct: 282 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 341

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR++FD M  +   PD  +Y  +++GY       +  +L + M   G+  D   +  L+
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 401

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              + CG L +A ++F+EM   G+ PD +   +++      G MD+A+E  N+M+ +G+
Sbjct: 402 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 460



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D   +  +I         + + ++ +EM+++G+  + V   T++ A  + G+
Sbjct: 385 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+   ++M+D  +      +  LI G C  G + +A +    + + G+H ++  +++
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 504

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LCK   +  A+N+FD      + PD   Y+ L+DGY      ++AL + + M   G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y +LV G  + G + E   LF EM+ RGI P  IL   ++   ++ G    A 
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 624

Query: 241 ELQNEMMGRGL 251
              +EM   G+
Sbjct: 625 VKFHEMTESGI 635



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 122/248 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + +II  LC   +  D++ +       GL  + V+ + LMD Y   G+  +AL + 
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVF 557

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+ + IE  VV +C L++G CK G + E +  F  M   G+ P+  +Y+ +IDGL + 
Sbjct: 558 DAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA 617

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A+  F EM +  +  D   Y  ++ G  K+  F EA+ L   +  + V +++   
Sbjct: 618 GRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 677

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ G+ +   ++EA+ LF  +    ++P  +    ++    + G ++EA ++ + M  
Sbjct: 678 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737

Query: 249 RGLLSGSK 256
            G    S+
Sbjct: 738 AGCEPNSR 745



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG+N   D+  Y  ++ G   +    D   L   M  +G+  +      L+ AY   G 
Sbjct: 352 MKGQN--PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 409

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + +EM D  ++  VVT+  +I  LC+ G + +A++ F +M D G+ P+   Y  
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 469

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    + +A+ L  E+    M  D   ++++I+   K     +A N+ +    VG
Sbjct: 470 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y+ L+ G    G +++A  +F  M+  GI P+ ++  +L+  + + G +DE +
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 589

Query: 241 ELQNEMMGRGL 251
            L  EM+ RG+
Sbjct: 590 SLFREMLQRGI 600



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +I  D+     ++  LC   K ++++ +   M   G   +      +++ Y   G 
Sbjct: 315 MRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 374

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L D ML   I     TF VLI      G++ +A+  F  M D G+ P+V  Y  
Sbjct: 375 LVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 434

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LC+   ++ A   F++M  + + PD  AY  LI G+  H S  +A  L + +   G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD+  ++S++  L + G + +A+ +F   +  G+ PD ++   L+  +   G M++A+
Sbjct: 495 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKAL 554

Query: 241 ELQNEMMGRGL 251
            + + M+  G+
Sbjct: 555 RVFDAMVSAGI 565



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 3/205 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-GRMPDF 109
           LMD   +A  P  AL+   ++L + + V ++    L++G C++    EA+D    R P+ 
Sbjct: 117 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 176

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFK 167
           G  P+V  Y+ L+  LC +    +A +L   M +   +  P+  AY  +IDG+ K     
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 236

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A +L   M + G+  DL  Y S+V  L +   + +A     +M+ + +LP+     +L+
Sbjct: 237 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 296

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
             +   G   EA+ +  EM    +L
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRHSIL 321



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 103/217 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D  +Y  ++ G C+  K E +  +   M   G+  N V+  TL++ Y K G   E L
Sbjct: 530 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 589

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  EML   I+ + + + ++IDGL ++G    A   F  M + G+  ++  Y  ++ GL
Sbjct: 590 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGL 649

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K  C + A  LF E+   ++  +      +IDG  +    +EA +L   ++   +   +
Sbjct: 650 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSV 709

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             Y+ ++  L + G ++EA  +F  M   G  P+  L
Sbjct: 710 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 746



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 91/182 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ ++ +Y T++ G C   + ++   L  EM + G+  +T++ + ++D  F+AG 
Sbjct: 560 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM +S I + + T+ +++ GL K+    EAI  F  +    +  N+     
Sbjct: 620 TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG+ +   +E A++LF  + +  ++P    Y+ +I   +K    +EA ++ + M   G
Sbjct: 680 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 181 VD 182
            +
Sbjct: 740 CE 741



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 3/180 (1%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN-L 137
           T  T+ +L+D   ++     A+ +FG++   GL  N+ +   L++G C+    + A + L
Sbjct: 110 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL 169

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN--AYTSLVWGL 195
               P+   +PD  +Y+ L+          +A +L   M E G     N  AY +++ G 
Sbjct: 170 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 229

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            + G + +A  LF EM+ RGI PD +   S++    +   MD+A     +M+ + +L  +
Sbjct: 230 FKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNN 289



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 17/208 (8%)

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGL--------CKSGLVREAIDYFGRMPDFG- 110
            P EA  LLDE+      V        +  L        C+SG    A+  F R      
Sbjct: 44  RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPAL-AVALFNRAASRAQ 102

Query: 111 ----LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
               L P    Y  L+D   + +  E A   F ++ +  +  +      L++G+ + +  
Sbjct: 103 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRT 162

Query: 167 KEALN-LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL--PDEILC 223
            EAL+ L +R  E+G   D+ +Y+ L+  L   G   +A  L   M   G +  P+ +  
Sbjct: 163 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 222

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +++   ++ G++++A +L  EM+ RG+
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGI 250


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 122/248 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  K D+  Y  +I G+C E + +++   L+ M   G   N +    ++ +    G 
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL +ML      +VVTF +LI+ LC+  L+  AID   +MP  G  PN   Y  
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNP 389

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C++  ++RA    + M  R   PD   Y  L+    K      A+ + N+++  G
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L  Y +++ GL++ G  + A  L  EM  +G+ PD I   +LL+     G +DEAI
Sbjct: 450 CSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAI 509

Query: 241 ELQNEMMG 248
           ++ ++M G
Sbjct: 510 KIFHDMEG 517



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 114/246 (46%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  D+  Y TI+  LC   K +++  +L    +     + +  T L++A        +A
Sbjct: 204 SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQA 263

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + LLDEM     +  VVT+ VLI+G+CK G + EAI +   MP +G  PNV  +  ++  
Sbjct: 264 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRS 323

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           +C       A  L  +M ++   P    +  LI+   +      A+++  +M + G   +
Sbjct: 324 MCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPN 383

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
             +Y  L+ G  +   +  A      M+ RG  PD +   +LL    + G  D A+E+ N
Sbjct: 384 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILN 443

Query: 245 EMMGRG 250
           ++  +G
Sbjct: 444 QLSSKG 449



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 3/241 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++I G C   K   +  ++  ++ +G   + +    L+  Y K+GE  +AL +L+ M   
Sbjct: 147 SLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM--- 203

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +   VVT+  ++  LC SG ++EA++   R      +P+V  YT LI+  C  + + +A
Sbjct: 204 SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQA 263

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L DEM K+   PD   Y  LI+G  K     EA+   N M   G   ++  +  ++  
Sbjct: 264 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRS 323

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           +   G   +A  L  +M+ +G  P  +    L+     +  +  AI++  +M   G +  
Sbjct: 324 MCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPN 383

Query: 255 S 255
           S
Sbjct: 384 S 384



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 3/226 (1%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + E+    L  M   G   + + CT+L+  + ++G+  +A  +++ + +S     V+T+ 
Sbjct: 122 ELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYN 181

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           VLI G CKSG + +A+    RM    + P+V  Y  ++  LC    ++ A  + D   +R
Sbjct: 182 VLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQR 238

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           +  PD   YT LI+         +A+ L + M + G   D+  Y  L+ G+ + G L EA
Sbjct: 239 ECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEA 298

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
               + M   G  P+ I    +L+     G   +A  L  +M+ +G
Sbjct: 299 IKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 3/242 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I G C   + + +  +L  M    +  + V   T++ +   +G+  EA+ +L
Sbjct: 176 DVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVL 232

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D  +       V+T+ +LI+  C    V +A+     M   G  P+V  Y  LI+G+CK+
Sbjct: 233 DRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 292

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A    + MP     P+   +  ++        + +A  L   M   G    +  +
Sbjct: 293 GRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTF 352

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+  L R   L  A  +  +M   G +P+ +    LL    +   MD AIE    M+ 
Sbjct: 353 NILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS 412

Query: 249 RG 250
           RG
Sbjct: 413 RG 414



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 3/190 (1%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           + GE  E L  L+ M+       V+    LI G C+SG  R+A      + + G  P+V 
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y  LI G CK   I++A  + + M    + PD   Y  ++         KEA+ + +R 
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQ 235

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            +     D+  YT L+        + +A  L  EM  +G  PD +    L+    + G +
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295

Query: 237 DEAIELQNEM 246
           DEAI+  N M
Sbjct: 296 DEAIKFLNNM 305



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 83/187 (44%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L +M ++G   N++    L+  + +  +   A+  L+ M+       +VT+  L+  LC
Sbjct: 371 VLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALC 430

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G    A++   ++   G  P +  Y  +IDGL K    E A  L +EM ++ + PD  
Sbjct: 431 KDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDII 490

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ L+ G        EA+ + + M  + +      Y +++ GL +      A      M
Sbjct: 491 TYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYM 550

Query: 212 IGRGILP 218
           + +G  P
Sbjct: 551 VEKGCKP 557



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 3/161 (1%)

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           L ++G + E + +  RM   G  P+V   T+LI G C+     +A  + + +     +PD
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              Y  LI GY K     +AL +  RM+   V  D+  Y +++  L   G L+EA  +  
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAMEVLD 233

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             + R   PD I    L++       + +A++L +EM  +G
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG 274



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 62/125 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K     L  Y T+I GL    K E +  LL EM+  GL  + +  +TL+      G+
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  +M    I+ + VT+  ++ GLCK+     AID+   M + G  P  A YT 
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564

Query: 121 LIDGL 125
           LI+G+
Sbjct: 565 LIEGI 569


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 114/236 (48%), Gaps = 2/236 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y T+I G C   + + +  ++ EM+E G +  +     TL+  + K G   +A  + DEM
Sbjct: 150 YNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEM 209

Query: 72  L-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           L    +  + V +  LI G C  G +  A+ Y   M   G+   VA Y  L+  L     
Sbjct: 210 LTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGR 269

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A  + +EM +  + PD   Y  LI+GY K  + K+AL +   M+  GV      YTS
Sbjct: 270 ASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTS 329

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L++  SR G +QE   LF   + +GI PD ++  +L+  H   G+M+ A E+  EM
Sbjct: 330 LIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEM 385



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 8/228 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   +  Y  ++  L ++ +  D+  +L EM+ NGL+ +      L++ Y K G 
Sbjct: 245 MVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGN 304

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + +EM    +  T VT+  LI    + G V+E    F      G+ P+V +Y A
Sbjct: 305 EKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNA 364

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  C    +ERA  +  EM K+ + PD   Y  LI G+       EA  L + MT+ G
Sbjct: 365 LINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRG 424

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           +  DL        GL + G   +A  L  EM+G+GI PD+   ISL++
Sbjct: 425 IQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIE 464



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 8/240 (3%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K + +     +M + G+         L+ A F  G  S+A ++L+EM
Sbjct: 221 MYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEM 280

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
             + +   V T+ +LI+G CK G  ++A++ F  M   G+      YT+LI    +K  +
Sbjct: 281 QRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQV 340

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +    LF    K+ + PD   Y ALI+ +      + A  +   M +  +  D   Y +L
Sbjct: 341 QETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTL 400

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G    G L EAR L  EM  RGI PD  LC        + G  D+A  L  EM+G+G+
Sbjct: 401 IRGFCLLGRLDEARGLIDEMTKRGIQPDLGLC--------KNGQGDDAENLMKEMVGKGI 452



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 117/247 (47%), Gaps = 1/247 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTA-NTVICTTLMDAYFKAGEPSEA 64
           I  D   Y T+I G C   + ED+  +  EM   G  A + V+   L+  Y   G+   A
Sbjct: 179 IAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVA 238

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L   ++M+   + +TV T+ +L+  L   G   +A      M   GL P+V  Y  LI+G
Sbjct: 239 LQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILING 298

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
            CK+   ++A  +F+EM ++ +      YT+LI  + +    +E   L     + G+  D
Sbjct: 299 YCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPD 358

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y +L+      G ++ A  +  EM  + I PD++   +L++     G +DEA  L +
Sbjct: 359 VVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLID 418

Query: 245 EMMGRGL 251
           EM  RG+
Sbjct: 419 EMTKRGI 425



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 41/227 (18%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           + A +L  ++   R+ +   TF +++  LC +G    A++   +MP     PN   Y  +
Sbjct: 98  APAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTV 153

Query: 122 IDGLCKKNCI------------------------------------ERARNLFDEM-PKR 144
           I G C +  +                                    E A  +FDEM  + 
Sbjct: 154 IAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQG 213

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           ++ P    Y ALI GY        AL  +  M + GV + +  Y  LV  L   G   +A
Sbjct: 214 EVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDA 273

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +  EM   G+ PD      L+  + + GN  +A+E+  EM  +G+
Sbjct: 274 YAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGV 320



 Score = 67.8 bits (164), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 8/159 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++A    Y ++I+    + + +++  L     + G+  + V+   L++++   G+
Sbjct: 315 MSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGD 374

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  ++ EM   RI    VT+  LI G C  G + EA      M   G+ P++     
Sbjct: 375 MERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL----- 429

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
              GLCK    + A NL  EM  + + PD + Y +LI+G
Sbjct: 430 ---GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEG 465



 Score = 48.5 bits (114), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 8/122 (6%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ D+ +Y  +I   C     E +  +++EM++  +  + V   TL+  +   G   E
Sbjct: 353 KGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDE 412

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L+DEM    I+  +        GLCK+G   +A +    M   G+ P+ + Y +LI+
Sbjct: 413 ARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIE 464

Query: 124 GL 125
           GL
Sbjct: 465 GL 466


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  120 bits (300), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 125/254 (49%), Gaps = 4/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ K+ K D+  +  II G C   +  ++  +L  +   G   N V  TTL+D + K+G 
Sbjct: 166 VEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN 225

Query: 61  PSEALSLLDEMLDSR---IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
            SEAL L  ++L SR    E  VVTF  LI GLCK+  +  A +   +M    L  +   
Sbjct: 226 LSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFT 284

Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           YT L+DGLCK+        +F+EM +    P    YT L+  + K  S ++A  +   M 
Sbjct: 285 YTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMV 344

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
             G+  D+  YT L+ GL   G ++ A   F +++     P  ++  +L++   +   +D
Sbjct: 345 AKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVD 404

Query: 238 EAIELQNEMMGRGL 251
           EA++   EM+ R L
Sbjct: 405 EAVKYYVEMLDRRL 418



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 5/242 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II   C   + + ++ LL E   +  +++ +  T++   + KA    EA  LL +M+
Sbjct: 109 YTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMV 166

Query: 73  DSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           + +  +  +V + V+I G CK+G VREA +    +   G  PN   YT LIDG CK   +
Sbjct: 167 EKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNL 226

Query: 132 ERARNLFDEMPKRD--MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
             A  LF  +  RD    P+   + ALI G  K +  + A  L  +M    +  D   YT
Sbjct: 227 SEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYT 286

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +L+ GL + G   E   +F EM+  G  P  +   +L+  H + G++ +A ++   M+ +
Sbjct: 287 TLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK 346

Query: 250 GL 251
           G+
Sbjct: 347 GI 348



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 84/163 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK ++++AD   Y T++ GLC + +  +   +  EM   G   + V  TTL+ A+ KAG 
Sbjct: 273 MKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGS 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  ++  M+   I   V T+ VL++GL ++G VR A ++F ++      P   VY+A
Sbjct: 333 LQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSA 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
           L+ G CK   ++ A   + EM  R + PD      L++   K 
Sbjct: 393 LVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 115/239 (48%), Gaps = 7/239 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC   +  ++    ++M E     N      L+ +  +AG   +A+++   + 
Sbjct: 6   FSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI- 64

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYTALIDGLCKKNCI 131
             +   +V+T  +LI+G C+  L+ +A++ F  M  +F L P    YTA+I   CK + +
Sbjct: 65  --QCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRL 122

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE-VGVDLDLNAYTS 190
           ++AR L +E        D  A T++  G+ K +   EA  L   M E      D+ A+  
Sbjct: 123 DQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNV 180

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           ++ G  + G ++EA  +   ++  G +P+ +   +L+    + GN+ EA++L   +  R
Sbjct: 181 IIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSR 239



 Score = 38.1 bits (87), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 4/134 (2%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           PN   ++ LI GLCK   +  A   +++M +R  +P+      L+    +  +  +A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLLKKHY 231
              +      + LN    L+ G      L +A  LFHEM     ++P+     +++K + 
Sbjct: 61  FRGIQCSPSVITLNI---LINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 232 ERGNMDEAIELQNE 245
           +   +D+A +L  E
Sbjct: 118 KMDRLDQARQLLEE 131


>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
 gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
          Length = 600

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   Y T+I   C +    ++  +   M + G+ A+TV   +L+    K G 
Sbjct: 210 MDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGR 269

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM  ++     VT+  LIDG C++G + EA+   G M   G+ P VA Y A
Sbjct: 270 VKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNA 329

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LC+   ++    L +EM +R +  D      LI+ Y K      A  +K +M E G
Sbjct: 330 ILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESG 389

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   Y +L+ G  +   L EA+  F +M+  G  P+  +   L+    ++ N D  +
Sbjct: 390 LQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVL 449

Query: 241 ELQNEMMGRGL 251
            + +E+M RGL
Sbjct: 450 LIPDELMKRGL 460



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D      ++  L        ++ +  EM   GL  +T +   ++    KAG+
Sbjct: 140 MRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTHVYNAMLHVCLKAGD 199

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A +L+  M  + + +   ++  +I   CK G+  EA+    RM   G+  +   + +
Sbjct: 200 AARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNS 259

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK   ++ A  LF EM      PD   YT LIDGY +  + +EA+ L+  M   G
Sbjct: 260 LIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATG 319

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +++  L   G ++E   L +EM  R +  D + C +L+  + +RG+M  A 
Sbjct: 320 MLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSAC 379

Query: 241 ELQNEMMGRGL 251
           +++ +MM  GL
Sbjct: 380 KVKKKMMESGL 390



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 98/181 (54%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+  LC + K ++   LL+EM E  + A+ V C TL++AY K G  + A  +  +M+
Sbjct: 327 YNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMM 386

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S +++   T+  LI G CK+  + EA + F +M D G  PN +V++ L+DG CKKN  +
Sbjct: 387 ESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNAD 446

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               + DE+ KR + PD   Y +LI    +     +A  + ++M   G+  D   Y +L 
Sbjct: 447 AVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLA 506

Query: 193 W 193
           +
Sbjct: 507 Y 507



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 127/255 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+AD   + ++I GLC   + +++  L +EM     T + V  TTL+D Y +AG 
Sbjct: 245 MDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGN 304

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  EM  + +   V T+  ++  LC+ G ++E       M +  +  +      
Sbjct: 305 IEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNT 364

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  CK+  +  A  +  +M +  +  +   Y ALI G+ K +   EA     +M + G
Sbjct: 365 LINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAG 424

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              + + ++ LV G  +  +     ++  E++ RG+ PD+ +  SL+++   +G +D+A 
Sbjct: 425 FSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQ 484

Query: 241 ELQNEMMGRGLLSGS 255
           ++ ++M  +GL+  S
Sbjct: 485 KVFDQMQSKGLVGDS 499



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 104/231 (45%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  L   ++  D+  +  +M+  GL  +   CT L+ A  +A   + A  + DEM  + 
Sbjct: 120 LVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAG 179

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           + V+   +  ++    K+G    A     RM   G+  +   Y  +I   CKK     A 
Sbjct: 180 LAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAM 239

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            + D M K  +  DT  + +LI G  K+   KEA  L   M       D   YT+L+ G 
Sbjct: 240 CVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGY 299

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            R G+++EA  L  EM   G+LP      ++L+K  E G M E  +L NEM
Sbjct: 300 CRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEM 350



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           ++  P +AL + D+M    +         L+  L ++ +   A   F  M   GL  +  
Sbjct: 126 QSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMARAGLAVSTH 185

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           VY A++    K     RA  L   M    +  D  +Y  +I  Y K     EA+ +++RM
Sbjct: 186 VYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYEAMCVRDRM 245

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            + G+  D   + SL+ GL + G ++EA  LF EM      PD +   +L+  +   GN+
Sbjct: 246 DKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNI 305

Query: 237 DEAIELQNEMMGRGLLSG 254
           +EA++L+ EM   G+L G
Sbjct: 306 EEAVKLRGEMEATGMLPG 323


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D+  Y  ++ GLC   K E++  L  E K+NG   +      ++D Y KA  
Sbjct: 503 MVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANR 562

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L  EM+  +IE   V +  LI   C++G +REA      M   G+    A Y++
Sbjct: 563 VEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSS 622

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL     ++ A  L DEM K  + P+   YTALI GY K     +  ++   M+   
Sbjct: 623 LIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINN 682

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   YT ++ G  + G+++ A  L +EM  +GI+PD +   +L     + G M+EA+
Sbjct: 683 VHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEAL 742

Query: 241 ELQNEMMGRGL 251
           ++ + M   G+
Sbjct: 743 KVCDLMSTGGI 753



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +K  L  YG +I GL    +F+++  +L EM + G   N V+  TL+D Y + G 
Sbjct: 258 MEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGN 317

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL + D+M+ + I    VT   LI G CKS  +  A      M   G   N   +T+
Sbjct: 318 ISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTS 377

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LC K   + A     EM  R+  P+    T L+ G  ++    EA+ L  R+ E G
Sbjct: 378 VIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG 437

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +     +L+ GL   G  +EA  L  EM+ RG++ D I   +L+    + G ++E  
Sbjct: 438 FAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGF 497

Query: 241 ELQNEMMGRGL 251
           +L+ EM+ RG+
Sbjct: 498 KLKEEMVRRGI 508



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 115/243 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K   A+      +I GLC     E++  LL EM E GL  +++   TL+ A  K G+  E
Sbjct: 436 KGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEE 495

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              L +EM+   I+  + T+ +L+ GLC  G + EA   +      G  P+   Y  +ID
Sbjct: 496 GFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMID 555

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK N +E    LF EM    +  +   Y  LI  Y ++ + +EA  L++ M   G+  
Sbjct: 556 GYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQ 615

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
               Y+SL+ GLS  G +  A  L  EM   G+ P+ +   +L+  + + G M +   + 
Sbjct: 616 TSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSIL 675

Query: 244 NEM 246
            EM
Sbjct: 676 QEM 678



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 106/219 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   YG +I G C  ++ E+ + L  EM    +  N V+  TL+ AY + G   EA  L 
Sbjct: 546 DAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLR 605

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D+M    I  T  T+  LI GL   GLV  A      M   GL PNV  YTALI G CK 
Sbjct: 606 DDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKL 665

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             + +  ++  EM   ++ P+   YT +I+G+ K  + K A  L N M + G+  D   Y
Sbjct: 666 GQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTY 725

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            +L  G  + G ++EA  +   M   GI  D+I   +L+
Sbjct: 726 NALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 105/219 (47%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L S +   GL  +   C  L+ +  KA E   +  + D M    +   V  F  +++  C
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFC 208

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G V +AI+ F +M   G+ PNV  Y  +I GLCK   ++ A    ++M K  + P   
Sbjct: 209 TGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLV 268

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  LI+G +K E F EA  +   M++ G   +   Y +L+ G  R G++  A  +  +M
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I  GI P+ + C SL++ + +   M+ A  L  EM+  G
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGG 367



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 112/248 (45%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N K +  L   ++ GLC   K  ++  L   + E G  ANTV    L+    +AG   E
Sbjct: 401 RNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEE 460

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LL EML+  + +  +++  LI   CK G V E       M   G+ P++  Y  L+ 
Sbjct: 461 AAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLH 520

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC    IE A  L+ E  K    PD   Y  +IDGY K    +E   L   M  + ++ 
Sbjct: 521 GLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQ 580

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y +L+      G+++EA  L  +M  RGI        SL+      G +D A +L 
Sbjct: 581 NAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLL 640

Query: 244 NEMMGRGL 251
           +EM   GL
Sbjct: 641 DEMRKEGL 648



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 116/250 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+ L+ T++   C   + +D+  L  +M++ G+  N V    ++    K G   EA 
Sbjct: 193 VTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAF 252

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              ++M   R++ ++VT+ VLI+GL K     EA      M D G  PN  VY  LIDG 
Sbjct: 253 QFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGY 312

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+   I  A  + D+M    + P++    +LI GY K    + A +L   M   G  ++ 
Sbjct: 313 CRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQ 372

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +TS++  L        A +   EM+ R   P++ L   L+    + G   EAIEL   
Sbjct: 373 GTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYR 432

Query: 246 MMGRGLLSGS 255
           ++ +G  + +
Sbjct: 433 LLEKGFAANT 442



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 126/314 (40%), Gaps = 70/314 (22%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y T+I G C       +  +  +M  NG++ N+V C +L+  Y K+ +   A  LL+EM
Sbjct: 304 VYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEM 363

Query: 72  LDSRIEVTVVTFC-----------------------------------VLIDGLCKSGLV 96
           L     +   TF                                    +L+ GLC++G  
Sbjct: 364 LTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQ 423

Query: 97  REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
            EAI+ + R+ + G   N     ALI GLC+    E A  L  EM +R ++ D+ +Y  L
Sbjct: 424 SEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTL 483

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           I    K    +E   LK  M   G+  D+  Y  L+ GL   G ++EA  L+HE    G 
Sbjct: 484 ILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGN 543

Query: 217 LPDE-----------------------------------ILCISLLKKHYERGNMDEAIE 241
            PD                                    ++  +L++ + E GNM EA  
Sbjct: 544 FPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFR 603

Query: 242 LQNEMMGRGLLSGS 255
           L+++M  RG+   S
Sbjct: 604 LRDDMRSRGIPQTS 617



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 94/192 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ +  +YGT+I   C      ++  L  +M+  G+   +   ++L+      G    A 
Sbjct: 578 IEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSAN 637

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LLDEM    +   VV +  LI G CK G + +       M    +HPN   YT +I+G 
Sbjct: 638 QLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGH 697

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   ++ A  L +EM ++ ++PD   Y AL +G+ K    +EAL + + M+  G+ LD 
Sbjct: 698 CKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDD 757

Query: 186 NAYTSLVWGLSR 197
             YT+L+ G  +
Sbjct: 758 ITYTTLIDGWHK 769



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 2/241 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I   C E K E+   L  EM   G+  +      L+      G+  EA  L  E  
Sbjct: 480 YNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECK 539

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +       T+ ++IDG CK+  V E    F  M    +  N  VY  LI   C+   + 
Sbjct: 540 KNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMR 599

Query: 133 RARNLFDEMPKRDMIPDTTA-YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            A  L D+M  R  IP T+A Y++LI G         A  L + M + G+  ++  YT+L
Sbjct: 600 EAFRLRDDMRSRG-IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTAL 658

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G  + G + +   +  EM    + P++I    ++  H + GNM  A +L NEM  +G+
Sbjct: 659 IGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGI 718

Query: 252 L 252
           +
Sbjct: 719 V 719



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 102/212 (48%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G+T +  + +T+++A+   G   +A+ L  +M    +   VVT+  +I GLCK+G + EA
Sbjct: 192 GVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEA 251

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
             +  +M    + P++  Y  LI+GL K    + A  +  EM  R   P+   Y  LIDG
Sbjct: 252 FQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDG 311

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           Y +  +   AL +++ M   G+  +     SL+ G  +   ++ A  L  EM+  G + +
Sbjct: 312 YCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVIN 371

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    S++ +   +   D A+    EM+ R  
Sbjct: 372 QGTFTSVIHRLCLKCRFDSALLFIMEMLLRNF 403



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 81/162 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I      Y ++I GL      + +  LL EM++ GL+ N V  T L+  Y K G+
Sbjct: 608 MRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQ 667

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +  S+L EM  + +    +T+ ++I+G CK G ++ A      M   G+ P+   Y A
Sbjct: 668 MHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNA 727

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           L +G CK+  +E A  + D M    +  D   YT LIDG+ K
Sbjct: 728 LTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 99/231 (42%), Gaps = 47/231 (20%)

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           EP+ A++++D +    I V    F  L  G+          + F  + + GL P++    
Sbjct: 119 EPAVAVTVVDLL----IHVYSTQFKHLGFGV--------VFELFSLLANKGLFPSLKTCN 166

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+  L K N ++ +  +FD M    + PD   ++ +++ +       +A+ L  +M +V
Sbjct: 167 FLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKV 226

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEA----------RV----------------------- 206
           GV  ++  Y +++ GL + G L EA          RV                       
Sbjct: 227 GVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEA 286

Query: 207 --LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             +  EM  RG  P+ ++  +L+  +   GN+  A++++++M+  G+   S
Sbjct: 287 NCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNS 337


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 127/278 (45%), Gaps = 35/278 (12%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A L  +  ++   C E +   ++ +   + + GL  + V   TLM+ Y + G+  +   L
Sbjct: 134 ASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKL 193

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID---- 123
            + M  S ++  V T+ VLI+GLCK   + EA D F  M D GL PN   +T LID    
Sbjct: 194 KNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCK 253

Query: 124 -------------------------------GLCKKNCIERARNLFDEMPKRDMIPDTTA 152
                                          GLCKK  +++A++L DEM  + + PD   
Sbjct: 254 NGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKIT 313

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           YT LIDG  K      A  L+  M +  + LD  AYT+L+ GL + G   +A  +  EM+
Sbjct: 314 YTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREML 373

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             G+ PD      ++ +  ++ ++  A +L  EM  +G
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQG 411



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 121/239 (50%), Gaps = 12/239 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G  A+      LM  + K GE   A S+ D + 
Sbjct: 116 YFKLVWGF------------YKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  + G + +       M   G+ P+V  Y+ LI+GLCK++ + 
Sbjct: 164 KWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMN 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A +LF+EM  + ++P+   +T LIDG+ K+     A+    +M       DL  Y +L+
Sbjct: 224 EANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +GL + G L++A+ L  EM  +G+ PD+I   +L+  + + G++D A EL+  M+   +
Sbjct: 284 YGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESI 342



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 109/218 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK  ++  L +EM + GL  N V  TTL+D + K G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGK 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+    +ML       ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  ++ A  L + M K  +  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D   YT ++    +   ++ A  L  EM  +G +P
Sbjct: 377 LKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVP 414



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 107/210 (50%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L++AY ++G   +A+       + ++ V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK+  I  A+++FD + K  + P   ++  L++GY++
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIR 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                +   LKN M   GV  D+  Y+ L+ GL +   + EA  LF+EM+ +G++P+ + 
Sbjct: 184 LGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +L+  H + G +D A+E   +M+ +  L
Sbjct: 244 FTTLIDGHCKNGKVDSAMETYKQMLSQCFL 273



 Score = 41.2 bits (95), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 35/144 (24%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL  Y T+I+GLC +   + ++ LL EM+  GL  + +  TTL+D   K G+   A  L 
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELR 334

Query: 69  DEMLDSRIEVTVV-----------------------------------TFCVLIDGLCKS 93
           + M+   I +  V                                   T+ ++I+  CK 
Sbjct: 335 ETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKK 394

Query: 94  GLVREAIDYFGRMPDFGLHPNVAV 117
             V+ A      M   G  P V  
Sbjct: 395 EDVKTAAKLLKEMQRQGHVPCVVT 418


>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
          Length = 521

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 16/250 (6%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  ++ +   YG +I G C   + E +++LL++M+  G+  N +I  T++D Y + G   
Sbjct: 264 GNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVD 323

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL +   M    +E+ + T+  L  GLC+ G+V                PN   YT LI
Sbjct: 324 DALKIKAAMEKIGVELNIYTYNTLACGLCRMGVV----------------PNYVTYTTLI 367

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
              CK   +  AR LF EM ++   P    Y+ +I GY K    +EA   +  M + G  
Sbjct: 368 SIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFV 427

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y SLV G    G +  A  LF EM  RG  P+ +   +L+    + G  + A +L
Sbjct: 428 PDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQL 487

Query: 243 QNEMMGRGLL 252
            ++M+  GL+
Sbjct: 488 YDDMLKAGLI 497



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 19/269 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I+A +  Y  ++  L         + L +EMK N +  +  + T +++AY +AG 
Sbjct: 192 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 251

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +LDE + + +E    T+ VLI G CK G +  A      M   G+  N  ++  
Sbjct: 252 MRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 311

Query: 121 LIDGLCKKNCIERARNLFDEMPK-------------------RDMIPDTTAYTALIDGYL 161
           +IDG C+K  ++ A  +   M K                     ++P+   YT LI  + 
Sbjct: 312 MIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHC 371

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           K     EA  L   M E G    +  Y+ ++ G ++ G ++EA     EM  +G +PD  
Sbjct: 372 KDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVY 431

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRG 250
              SL+  H   G +D A++L  EM  RG
Sbjct: 432 TYASLVHGHCVNGKVDVALKLFEEMKQRG 460



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 124/292 (42%), Gaps = 54/292 (18%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            ++ GLC   + +D++ LL +M  +G++ N +   +L+D Y +  +      +L+ M + 
Sbjct: 136 VVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENE 195

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            IE TV T+ +L+D L  +  + +    F  M    +  +V +YTA+I+  C+   + RA
Sbjct: 196 GIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRA 255

Query: 135 RNLFDEMPKRDMIPDTTAYTAL-----------------------------------IDG 159
             + DE     + P+   Y  L                                   IDG
Sbjct: 256 AKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDG 315

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC-------------------GH 200
           Y +     +AL +K  M ++GV+L++  Y +L  GL R                    G 
Sbjct: 316 YCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGD 375

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           + EAR LF EM  +G  P  +    ++  + ++G + EA   + EM  +G +
Sbjct: 376 MVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFV 427



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 19/214 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGL-----TANTVIC------- 48
           M+G+ +  +  ++ T+I G C +   +D+  + + M++ G+     T NT+ C       
Sbjct: 297 MQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGV 356

Query: 49  -------TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
                  TTL+  + K G+  EA  L  EM +     +V+T+ V+I G  K G +REA  
Sbjct: 357 VPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAER 416

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
           +   M   G  P+V  Y +L+ G C    ++ A  LF+EM +R   P+  AYTALI G  
Sbjct: 417 FRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLA 476

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
           K    + A  L + M + G+  D + Y++LV  L
Sbjct: 477 KEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 510



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 103/201 (51%), Gaps = 6/201 (2%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS---GLVREAIDYFGR 105
           + ++D   K+G   +A  LLD+M    + +  + +  L+D   +    G V+E ++    
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI--- 191

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M + G+   V  YT L+D L     I +   LF+EM   +++ D   YTA+I+ Y +  +
Sbjct: 192 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 251

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            + A  + +     GV+ +   Y  L+ G  + G ++ A +L  +M G+G+  ++I+  +
Sbjct: 252 MRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 311

Query: 226 LLKKHYERGNMDEAIELQNEM 246
           ++  +  +G +D+A++++  M
Sbjct: 312 MIDGYCRKGMVDDALKIKAAM 332



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 56/129 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K     +  Y  +I G   + +  +++    EM++ G   +     +L+  +   G+
Sbjct: 386 MAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGK 445

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L +EM     E  VV +  LI GL K G    A   +  M   GL P+ ++Y+A
Sbjct: 446 VDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSA 505

Query: 121 LIDGLCKKN 129
           L+  L   N
Sbjct: 506 LVGSLHTDN 514


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 124/242 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I G C  +  ++++ L+ +MKE+GLT +TV    L++   K  +  E   LL
Sbjct: 161 DVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLL 220

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM+++  E    ++  ++  LC+SG   EA     +M +    P+V  Y +L+DG CK 
Sbjct: 221 EEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKV 280

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A  L ++M  R   P    YT LI G+ + +   +A  +   M + G+  DL  Y
Sbjct: 281 SKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTY 340

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+ GL + G L+EA  L   M+ +   PD +    L+    + G +D+A  L   M+ 
Sbjct: 341 NCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLE 400

Query: 249 RG 250
           RG
Sbjct: 401 RG 402



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 119/240 (49%), Gaps = 8/240 (3%)

Query: 13  YGTIIWGLCIESKFEDSKLLL---SEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           YG +I G    S+  +SK++L   +EM     + + +   T++ AY + G+   ALS   
Sbjct: 27  YGALITGF---SRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFR 83

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
             +      T  T+C+LI GLC+   + EA      M     HP+ AVY  LI GLCK  
Sbjct: 84  GKM--WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMG 141

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I+ ARN+   M +R  +PD   YT+LI G  +  +  EA  L  +M E G+  D  AY 
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +L+ GL +   L+E   L  EM+  G  PD     +++    E G  +EA ++  +M+ +
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK 261



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 123/260 (47%), Gaps = 26/260 (10%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+     +  Y T+I G     +  D+  ++ +M + G++ + V    L+D   KAG+
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK 352

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ M++      VVT+ +L++GLCK G V +A      M + G  PN+  +  
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNT 412

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG CK   ++    + + M +    PD   Y+ LIDGY K    ++A  +      +G
Sbjct: 413 MIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI------LG 466

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY--------- 231
           +  D  +Y+S++ GL   G ++EA+ +   M  +G  P           HY         
Sbjct: 467 ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPP--------TSSHYALIIGGLCD 518

Query: 232 -ERGNMDEAIELQNEMMGRG 250
            ERG  DEA+++   M  RG
Sbjct: 519 VERG--DEALKMLQVMSERG 536



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 125/279 (44%), Gaps = 29/279 (10%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   D+  Y  ++ GLC   K +D++LLL  M E G   N V   T++D + KAG+
Sbjct: 363 MVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGK 422

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK---------------------------- 92
             E   +L+ M +      VVT+  LIDG CK                            
Sbjct: 423 VDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLC 482

Query: 93  -SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
            +G V EA +    M   G  P  + Y  +I GLC     + A  +   M +R   P+  
Sbjct: 483 STGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLY 542

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+ LI+G  K +  ++A+N+ + M E G   D+  YTSL+ G  +   +  A   F  M
Sbjct: 543 TYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTM 602

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              G  PD++    L+    + GN+++AIE+   M+ +G
Sbjct: 603 RDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKG 641



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 125/247 (50%), Gaps = 6/247 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K    D+  Y +++ G C  SK ++++ LL +M         +  TTL+  + +A   ++
Sbjct: 261 KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLAD 320

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  ++++M  + I   +VT+  L+DGLCK+G + EA +    M +    P+V  Y+ L++
Sbjct: 321 AYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVN 380

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   ++ AR L + M +R   P+   +  +IDG+ K     E   +   M EV    
Sbjct: 381 GLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTP 440

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y++L+ G  +   +Q+A  +       GI PD+    S+L+     G ++EA E+ 
Sbjct: 441 DVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVM 494

Query: 244 NEMMGRG 250
           + M  +G
Sbjct: 495 DLMTKQG 501



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 121/249 (48%), Gaps = 3/249 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D   Y  ++ GLC +++ E+   LL EM E G   +T    T++    ++G+
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGK 247

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L++M++ +    VVT+  L+DG CK   + EA      M      P V  YT 
Sbjct: 248 YEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTT 307

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  + + +  A  + ++M K  + PD   Y  L+DG  K    +EA  L   M E  
Sbjct: 308 LIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA- 239
              D+  Y+ LV GL + G + +AR+L   M+ RG  P+ +   +++    + G +DE  
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGH 427

Query: 240 --IELQNEM 246
             +EL  E+
Sbjct: 428 KVLELMKEV 436



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 110/230 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++  LC   K+E++  +L +M E     + V   +LMD + K  +  EA  LL++M+
Sbjct: 235 YNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV 294

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             R   TV+T+  LI G  ++  + +A      M   G+ P++  Y  L+DGLCK   +E
Sbjct: 295 GRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLE 354

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L + M ++D  PD   Y+ L++G  K     +A  L   M E G   +L  + +++
Sbjct: 355 EAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMI 414

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            G  + G + E   +   M      PD +   +L+  + +   M +A  +
Sbjct: 415 DGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI 464



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 113/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC   + +++  LL EM +     +  +   L+    K G+   A ++L  ML
Sbjct: 95  YCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMML 154

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      V+T+  LI G C++  + EA     +M + GL P+   Y AL++GLCK+N +E
Sbjct: 155 ERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLE 214

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               L +EM +    PDT +Y  ++    +   ++EA  +  +M E     D+  Y SL+
Sbjct: 215 EVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLM 274

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   + EA  L  +M+GR   P  I   +L+        + +A  +  +M   G+
Sbjct: 275 DGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGI 333



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 29/254 (11%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA----- 58
           +  + +L  + T+I G C   K ++   +L  MKE   T + V  +TL+D Y KA     
Sbjct: 401 RGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQD 460

Query: 59  ------------------------GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
                                   G+  EA  ++D M       T   + ++I GLC   
Sbjct: 461 AFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVE 520

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
              EA+     M + G  PN+  Y+ LI+GLCK   +E A N+ D M ++  +PD   YT
Sbjct: 521 RGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYT 580

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +LIDG+ K      A      M + G + D  AY  L+ G  + G++++A  +   M+ +
Sbjct: 581 SLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEK 640

Query: 215 GILPDEILCISLLK 228
           G  PD     SL++
Sbjct: 641 GCNPDAATYFSLMR 654



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 113/249 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+   D  +Y  +I GLC   K + ++ +L  M E     + +  T+L+    +   
Sbjct: 118 MIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA 177

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+++M +S +    V +  L++GLCK   + E       M + G  P+   Y  
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LC+    E A  + ++M ++   PD   Y +L+DG+ K     EA  L   M    
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               +  YT+L+ G SR   L +A  +  +M   GI PD +    LL    + G ++EA 
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357

Query: 241 ELQNEMMGR 249
           EL   M+ +
Sbjct: 358 ELLEVMVEK 366



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 95/191 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D   Y +++ GLC   K E+++ ++  M + G    +     ++          EAL
Sbjct: 467 ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEAL 526

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +L  M +   E  + T+ +LI+GLCK+  V +AI+    M + G  P+VA YT+LIDG 
Sbjct: 527 KMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGF 586

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N ++ A   F  M      PD  AY  LI G+ +  + ++A+ +   M E G + D 
Sbjct: 587 CKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDA 646

Query: 186 NAYTSLVWGLS 196
             Y SL+  L+
Sbjct: 647 ATYFSLMRSLT 657



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 4/202 (1%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-GRMPD 108
            L+  + +AG     L + +EML  R    V+T   ++   C+ G +  A+ +F G+M  
Sbjct: 29  ALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKM-- 86

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
               P    Y  LI GLC+   I+ A  L DEM ++D  PD   Y  LI G  K      
Sbjct: 87  -WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDA 145

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A N+   M E     D+  YTSL+ G  +   L EAR L  +M   G+ PD +   +LL 
Sbjct: 146 ARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLN 205

Query: 229 KHYERGNMDEAIELQNEMMGRG 250
              ++  ++E  +L  EM+  G
Sbjct: 206 GLCKQNQLEEVSKLLEEMVEAG 227



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + +L  Y  +I GLC   + ED+  +L  M E G   +    T+L+D + K  +
Sbjct: 532 MSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINK 591

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A      M DS  E   + + +LI G C+SG V +AI+    M + G +P+ A Y +
Sbjct: 592 MDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFS 651

Query: 121 LIDGL 125
           L+  L
Sbjct: 652 LMRSL 656



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 2/191 (1%)

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P E  S   E      + +  T+  LI G  ++G  +  ++    M      P+V  +  
Sbjct: 5   PLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNT 64

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++   C+   ++RA + F    K    P    Y  LI G  + +   EA  L + M +  
Sbjct: 65  ILKAYCQIGDLDRALSHF--RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD 122

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y  L+ GL + G +  AR +   M+ R  +PD I   SL+    +   +DEA 
Sbjct: 123 CHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEAR 182

Query: 241 ELQNEMMGRGL 251
           +L  +M   GL
Sbjct: 183 KLMEKMKESGL 193


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 16/263 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D   Y  +I  LC  SK +++ LL  EMK N +  +    T L+D++ K G 
Sbjct: 471 MMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGL 530

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A    DEM+       VVT+  LI    K+  +  A + F  M   G  PNV  YTA
Sbjct: 531 LQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTA 590

Query: 121 LIDGLCKKNCIERARNLFDEM------PKRDMI----------PDTTAYTALIDGYLKHE 164
           LIDG CK   IE+A  ++  M      P  DM           P+   Y AL+DG  K  
Sbjct: 591 LIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAH 650

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             KEA +L + M+  G + +   Y +L+ G  + G L EA+++F +M  RG  P+     
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710

Query: 225 SLLKKHYERGNMDEAIELQNEMM 247
           SL+ + ++   +D A+++ + M+
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRML 733



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 126/301 (41%), Gaps = 51/301 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  ++  D+  Y  +I   C     + ++    EM  +G   N V  T L+ AY KA +
Sbjct: 506 MKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK 565

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF----- 109
            S A  L + ML       VVT+  LIDG CKSG + +A   + RM      PD      
Sbjct: 566 MSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFK 625

Query: 110 ----------------------------------------GLHPNVAVYTALIDGLCKKN 129
                                                   G  PN  VY ALIDG CK  
Sbjct: 626 IDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVG 685

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++ A+ +F +M +R   P+   Y++LID   K +    AL + +RM E     ++  YT
Sbjct: 686 KLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYT 745

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
            ++ GL + G   EA  L   M  +G  P+ +   +++    + G +D+ +EL  +M  +
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805

Query: 250 G 250
           G
Sbjct: 806 G 806



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 16/247 (6%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
           LC   KFE +  ++ EM   G   +T   + ++     A +   A  L +EM  + +   
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           V T+ +LID  CK GL+++A  +F  M   G  PNV  YTALI    K   +  A  LF+
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM------TEVGV----------DL 183
            M     IP+   YTALIDG+ K    ++A  +  RM       +V +          D 
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  Y +LV GL +   ++EAR L   M   G  P+ I+  +L+    + G +DEA  + 
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVF 694

Query: 244 NEMMGRG 250
            +M  RG
Sbjct: 695 TKMSERG 701



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 93/199 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG ++ GLC   K ++++ LL  M   G   N ++   L+D + K G+  EA  +  +M 
Sbjct: 639 YGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMS 698

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      V T+  LID L K   +  A+    RM +    PNV +YT +IDGLCK    +
Sbjct: 699 ERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD 758

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M ++   P+   YTA+IDG+ K     + L L  +M   G   +   Y  L+
Sbjct: 759 EAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLI 818

Query: 193 WGLSRCGHLQEARVLFHEM 211
                 G L +A  L  EM
Sbjct: 819 NHCCAAGLLDDAHQLLDEM 837



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 14/241 (5%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K ++++++ ++M E G   N    ++L+D  FK      AL +L  M
Sbjct: 673 VYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM 732

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L++     V+ +  +IDGLCK G   EA      M + G HPNV  YTA+IDG  K   +
Sbjct: 733 LENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKV 792

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           ++   L  +M  +   P+   Y  LI+         +A  L + M +      +  Y  +
Sbjct: 793 DKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKV 852

Query: 192 VWGLSR-----CGHLQEARVLFHEMIGRGILPD-EILCISLLKKHYERGNMDEAIELQNE 245
           + G +R      G L E      E +   I+P   IL  S  K     G ++ A+EL  E
Sbjct: 853 IEGFNREFIISLGLLDE----IAENVAVPIIPAYRILIDSFCKA----GRLELALELHKE 904

Query: 246 M 246
           M
Sbjct: 905 M 905



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 109/250 (43%), Gaps = 16/250 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENG----------------LTANTVICTTLMDAYF 56
           Y  +I G C   + E +  + + M+ N                    N      L+D   
Sbjct: 588 YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLC 647

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           KA +  EA  LLD M     E   + +  LIDG CK G + EA   F +M + G  PNV 
Sbjct: 648 KAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVY 707

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            Y++LID L K   ++ A  +   M +    P+   YT +IDG  K     EA  L + M
Sbjct: 708 TYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMM 767

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G   ++  YT+++ G  + G + +   L  +M  +G  P+ +    L+      G +
Sbjct: 768 EEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLL 827

Query: 237 DEAIELQNEM 246
           D+A +L +EM
Sbjct: 828 DDAHQLLDEM 837



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 6/214 (2%)

Query: 12  LYGTIIWGLCIESKFEDSKLL------LSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +Y  +I G+C   K     +L        EM +  +  N V  + L      AG+  +A 
Sbjct: 406 VYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAY 465

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S++ EM+         T+  +I  LC +  V  A   F  M    + P+V  YT LID  
Sbjct: 466 SIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSF 525

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +++AR  FDEM +    P+   YTALI  YLK      A  L   M   G   ++
Sbjct: 526 CKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNV 585

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             YT+L+ G  + G +++A  ++  M G   +PD
Sbjct: 586 VTYTALIDGHCKSGQIEKACQIYARMRGNADIPD 619



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 116/237 (48%), Gaps = 8/237 (3%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I GLC   K +++  L+S M+E G   N V  T ++D + KAG+  + L L+ +M
Sbjct: 743 IYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM 802

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
                    VT+ VLI+  C +GL+ +A      M       ++A Y  +I+G  ++  I
Sbjct: 803 GAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII 862

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV----GVDLDLNA 187
             +  L DE+ +   +P   AY  LID + K    + AL L   M+        D DL  
Sbjct: 863 --SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDL-- 918

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           Y+SL+  LS    + +A  L+ +MI RG +P+  +   L+K        +EA++L +
Sbjct: 919 YSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 8/244 (3%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD-- 69
           ++ ++I   C    +  +  LL +M + G     V+   L+       E   +L +L+  
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG-ICGNEKLPSLDVLELA 429

Query: 70  -----EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
                EMLD+ + +  V    L   LC +G   +A      M   G  P+ + Y+ +I  
Sbjct: 430 EKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC  + ++ A  LF+EM    ++PD   YT LID + K    ++A    + M   G   +
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  YT+L+    +   +  A  LF  M+  G +P+ +   +L+  H + G +++A ++  
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609

Query: 245 EMMG 248
            M G
Sbjct: 610 RMRG 613



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 119/293 (40%), Gaps = 41/293 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTV-------------- 46
           ++ +  K D  +Y  +I GLC  S FE++   LS M+ +    N V              
Sbjct: 290 IEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQ 349

Query: 47  ---------------------ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
                                I  +L+ AY ++G+ S A  LL +M D   +   V + +
Sbjct: 350 LGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNI 409

Query: 86  LIDGLCKS------GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           LI G+C +       ++  A   +G M D  +  N    + L   LC     E+A ++  
Sbjct: 410 LIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIR 469

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM  +  IPDT+ Y+ +I           A  L   M    V  D+  YT L+    + G
Sbjct: 470 EMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVG 529

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            LQ+AR  F EM+  G  P+ +   +L+  + +   M  A EL   M+  G +
Sbjct: 530 LLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCI 582



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 104/236 (44%), Gaps = 13/236 (5%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + + + L+  EM ++G   +       +    KAG   EAL+L+++      ++  V + 
Sbjct: 247 RLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYT 303

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            +I GLC++ L  EA+D+  RM      PNV  Y  L+ G  +K  + R + +   M   
Sbjct: 304 QMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITE 363

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH---- 200
              P    + +LI  Y +   +  A  L  +M + G       Y  L+ G+  CG+    
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGI--CGNEKLP 421

Query: 201 ----LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               L+ A   + EM+   ++ +++   +L +     G  ++A  +  EMM +G +
Sbjct: 422 SLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 17  IWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           +W + +E         L  +K+ G   + +    L+  + +A     A  +  EM DS  
Sbjct: 212 LWNVALEE--------LGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF 263

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
            +   T    +  LCK+G  REA+    +  +F L  +  +YT +I GLC+ +  E A +
Sbjct: 264 NMDGYTLGCFVHLLCKAGRWREALALIEK-EEFKL--DTVIYTQMISGLCEASLFEEAMD 320

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
               M     IP+   Y  L+ G L+         + + M   G       + SL+    
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380

Query: 197 RCGHLQEARVLFHEMIGRGILPDEIL 222
           R G    A  L  +M   G  P  ++
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVV 406



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 83/224 (37%), Gaps = 38/224 (16%)

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI--- 122
             L E+ D   E+      VLI   C++GL   A++  GR+ D G  P+   Y AL+   
Sbjct: 183 QFLREIRDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVF 242

Query: 123 -----------------------DG---------LCKKNCIERARNLFDEMPKRDMIPDT 150
                                  DG         LCK     R R     + K +   DT
Sbjct: 243 LEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAG---RWREALALIEKEEFKLDT 299

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             YT +I G  +   F+EA++  +RM       ++  Y  L+ G  R   L   + +   
Sbjct: 300 VIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSM 359

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           MI  G  P   +  SL+  +   G+   A +L  +M   G   G
Sbjct: 360 MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K  L  Y  II GLC + ++  +K +L EM   GL+ +T    TL+    +   
Sbjct: 27  MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 86

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  +  EML   +   +V+F  L+    ++  + +A+ YF  M  FGL P+  +YT 
Sbjct: 87  FSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 146

Query: 121 L-----------------------------------IDGLCKKNCIERARNLFDEMPKRD 145
           L                                   ++GLCK+  +  A  LFDEM +R 
Sbjct: 147 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 206

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            +PD   +T LI G+ +  +  +AL+L   MT+  +  D+ AY +L+ G  + G +++A 
Sbjct: 207 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 266

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L+  MI R I P+ I    L+  +   G++ EA  L + M+ +G+
Sbjct: 267 ELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGI 312



 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 125/248 (50%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  DL  + +++         + + +   +MK+ GL  + VI T LM  Y + G   E
Sbjct: 100 QGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLE 159

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL + DEML+    + V+ +  +++GLCK  ++ +A   F  M + G  P+   +T LI 
Sbjct: 160 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIH 219

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C+   + +A +LF  M +R++ PD  AY  LIDG+ K    ++A  L + M    +  
Sbjct: 220 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP 279

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y  L+      GH+ EA  L+  MI +GI P  + C +++K +   G+  +A E  
Sbjct: 280 NHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFL 339

Query: 244 NEMMGRGL 251
             M+ +G+
Sbjct: 340 GRMIAKGV 347



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 123/239 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I   C E   E++  +++ M + GL  +      +++   K G  + A  +L EML
Sbjct: 4   YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +     T+  L+   C+     EA + FG M   G+ P++  +++L+    +   ++
Sbjct: 64  NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLD 123

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A   F +M K  ++PD   YT L+ GY ++ +  EAL +++ M E G  LD+ AY +++
Sbjct: 124 QALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 183

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +   L +A  LF EM+ RG LPD     +L+  H + GNM +A+ L   M  R +
Sbjct: 184 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 98/171 (57%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           +VT+  LI   C+ GL+ EA +    M D GL P++  Y A+I+GLCKK    RA+ +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM    + PDTT Y  L+    + ++F EA  +   M   GV  DL +++SL+   SR  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           HL +A V F +M   G++PD ++   L+  +   GNM EA+++++EM+ +G
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG 171



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 101/221 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  D  +Y  ++ G C      ++  +  EM E G   + +   T+++   K   
Sbjct: 132 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKM 191

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  L DEM++        TF  LI G C+ G + +A+  FG M    + P++  Y  
Sbjct: 192 LTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNT 251

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +E+A  L+D M  R + P+   Y  LI+ Y       EA  L + M E G
Sbjct: 252 LIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKG 311

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +   L    +++ G  R G   +A      MI +G+ PD I
Sbjct: 312 IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHI 352



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 85/184 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y TI+ GLC E    D+  L  EM E G   +    TTL+  + + G  ++ALSL 
Sbjct: 175 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 234

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M    I+  +V +  LIDG CK G + +A + +  M    + PN   Y  LI+  C  
Sbjct: 235 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 294

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  L+D M ++ + P       +I GY +     +A     RM   GV  D  +Y
Sbjct: 295 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 354

Query: 189 TSLV 192
            +L+
Sbjct: 355 NTLI 358



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 63/123 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NIK D+  Y T+I G C   + E +  L   M    +  N +    L++AY   G 
Sbjct: 237 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 296

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  L D M++  I+ T+VT   +I G C+SG   +A ++ GRM   G+ P+   Y  
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 356

Query: 121 LID 123
           LI+
Sbjct: 357 LIN 359



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 67/150 (44%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   + T+I G C +     +  L   M +  +  + V   TL+D + K GE  +A  L 
Sbjct: 210 DFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELW 269

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+  +I    +T+ +LI+  C  G V EA   +  M + G+ P +     +I G C+ 
Sbjct: 270 DGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRS 329

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALID 158
               +A      M  + + PD  +Y  LI+
Sbjct: 330 GDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%)

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           +  Y  LI   C++  +E A  + + M  + + P    Y A+I+G  K   +  A  +  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M  +G+  D   Y +L+    R  +  EA+ +F EM+ +G++PD +   SL+       
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 235 NMDEAIELQNEMMGRGLL 252
           ++D+A+    +M   GL+
Sbjct: 121 HLDQALVYFRDMKKFGLV 138


>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 544

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 127/252 (50%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      D  L G ++    +  +F+ SK LL+E + +G+  + ++    ++   K   
Sbjct: 134 MRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEAQCSGVQVDVIVYNNFLNILIKHNR 193

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L  E++ S   +   TF +LI GLC +G V EA +  G M  FG  P++  Y  
Sbjct: 194 LDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNI 253

Query: 121 LIDGLCKKNCIERARNLFDEMP-KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L+ GLC+ + ++RAR+L +E+  K +  P+  +YT +I GY +     EA +L   M   
Sbjct: 254 LLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRS 313

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   ++  +++LV G  + G +  A  +  +++  G  P+ I   SL+  +   G ++  
Sbjct: 314 GTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHG 373

Query: 240 IELQNEMMGRGL 251
           ++L  EM  R +
Sbjct: 374 LDLWREMNARNI 385



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 114/235 (48%), Gaps = 1/235 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C  SK +++  L  EM  +G   N    + L+D + KAG+ + AL +  ++L
Sbjct: 287 YTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKIL 346

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  V+T   LI+G C++G V   +D +  M    +  N+  Y+ LI  LCK N ++
Sbjct: 347 FHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQ 406

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            ARNL   + + D++P    Y  +IDGY K  +  EA  +   M E     D   +T L+
Sbjct: 407 EARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEE-KCKPDKLTFTILI 465

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            G    G   EA  +F++M+  G  PD+I   +L     + G   EA  ++  + 
Sbjct: 466 IGHCMKGRTPEAIGIFYKMLASGCTPDDITIRTLSSCLLKSGMPGEAARIKETLF 520



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 1/235 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM- 71
           +  +I GLC     +++  LL +M   G + + V    L+    +  +   A  LL+E+ 
Sbjct: 216 FNILIRGLCTAGDVDEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVC 275

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L       VV++  +I G C+   + EA   F  M   G  PNV  ++AL+DG  K   +
Sbjct: 276 LKCEFAPNVVSYTTVISGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDM 335

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  +  ++      P+    T+LI+GY +       L+L   M    +  +L  Y+ L
Sbjct: 336 ASALGMHKKILFHGCAPNVITLTSLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVL 395

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +  L +   LQEAR L   +    I+P   +   ++  + + GN+DEA  +  EM
Sbjct: 396 ISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGNIDEANAIVAEM 450



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 6/225 (2%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+ +Y   +  L   ++ +D+  L  E+  +    +      L+     AG+  EA 
Sbjct: 174 VQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEAF 233

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM---PDFGLHPNVAVYTALI 122
            LL +M        +VT+ +L+ GLC+   V  A D    +    +F   PNV  YT +I
Sbjct: 234 ELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFA--PNVVSYTTVI 291

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C+ + ++ A +LF EM +    P+   ++AL+DG++K      AL +  ++   G  
Sbjct: 292 SGYCRLSKMDEASSLFYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCA 351

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            ++   TSL+ G  R G +     L+ EM  R I P  +   S+L
Sbjct: 352 PNVITLTSLINGYCRAGWVNHGLDLWREMNARNI-PANLYTYSVL 395



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 1/114 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI A+L  Y  +I  LC  ++ ++++ LL  +K++ +     +   ++D Y K+G 
Sbjct: 380 MNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFVYNPVIDGYCKSGN 439

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
             EA +++ EM + + +   +TF +LI G C  G   EAI  F +M   G  P+
Sbjct: 440 IDEANAIVAEM-EEKCKPDKLTFTILIIGHCMKGRTPEAIGIFYKMLASGCTPD 492



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 64/164 (39%), Gaps = 1/164 (0%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++I G C          L  EM    + AN    + L+ A  K+    EA +LL  +  S
Sbjct: 359 SLINGYCRAGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQS 418

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            I      +  +IDG CKSG + EA      M +    P+   +T LI G C K     A
Sbjct: 419 DIVPLAFVYNPVIDGYCKSGNIDEANAIVAEMEE-KCKPDKLTFTILIIGHCMKGRTPEA 477

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             +F +M      PD      L    LK     EA  +K  + E
Sbjct: 478 IGIFYKMLASGCTPDDITIRTLSSCLLKSGMPGEAARIKETLFE 521



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 78/205 (38%), Gaps = 36/205 (17%)

Query: 82  TFCVLIDGLCKSGLVREAIDYF------GRMPD--------------------------- 108
           T+ +L+  LC++GL   A   +      G++PD                           
Sbjct: 110 TYNMLLRSLCQAGLHNSAKLLYDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEA 169

Query: 109 --FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G+  +V VY   ++ L K N ++ A  LF E+ +     D   +  LI G       
Sbjct: 170 QCSGVQVDVIVYNNFLNILIKHNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDV 229

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCIS 225
            EA  L   M   G   D+  Y  L+ GL R   +  AR L  E+  +    P+ +   +
Sbjct: 230 DEAFELLGDMGSFGCSPDIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTT 289

Query: 226 LLKKHYERGNMDEAIELQNEMMGRG 250
           ++  +     MDEA  L  EM+  G
Sbjct: 290 VISGYCRLSKMDEASSLFYEMVRSG 314


>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 418

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK + +  L +EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVV 417



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 117/221 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +   A  L +EMLD+ +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKV 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYV 413



 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 120/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG      +EDS        E G  A+      LM  + K GE   A S+ D + 
Sbjct: 116 YFKLVWGF-----YEDSL-------ECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  T V+F  L++G  + G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 YANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD++   +L+    + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMI 338



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 104/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+   CK+  I+ A+++FD + K  + P   ++  L++GY++
Sbjct: 124 YEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIR 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   +  A  LF+EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 89/185 (48%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
             ++ L+     ++  F +L+   CK G ++ A   F  +  +GL P    +  L++G  
Sbjct: 123 FYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYI 182

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +   ++    L + M    + PD   Y+ LI+G  K      A  L N M + G+  +  
Sbjct: 183 RLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGV 242

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302

Query: 247 MGRGL 251
             +GL
Sbjct: 303 SMKGL 307


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  120 bits (300), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 125/246 (50%), Gaps = 4/246 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++ +Y T+I GLC      ++  +   M++ G+ A+ V   TL+     +G  ++A 
Sbjct: 716 LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL +M+  +I+  V+ F  LID   K G + EA + +  M    +HPN+  Y +LI+G 
Sbjct: 776 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C +  +  A+++FD M  +   PD   Y  LI G+ K +  ++ + L   MT  G+  D 
Sbjct: 836 CIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDA 895

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI----E 241
             Y +L+ G  + G L  A+ +F+ M+  G+ PD +    LL      G +++A+    +
Sbjct: 896 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVED 955

Query: 242 LQNEMM 247
           LQ   M
Sbjct: 956 LQKNQM 961



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 124/291 (42%), Gaps = 35/291 (12%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+ K I AD   Y T+I GLC   ++ D+  LL +M +  +  N +  T L+D + K G 
Sbjct: 746  MEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 805

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA +L  EM+   +   ++T+  LI+G C  G + +A   F  M   G  P+V  Y  
Sbjct: 806  LLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNT 865

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LI G CK   +E    LF EM  + ++ D   Y  LI GY +      A  + NRM + G
Sbjct: 866  LITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 925

Query: 181  V-----------------------------------DLDLNAYTSLVWGLSRCGHLQEAR 205
            V                                   D+D+  Y  ++ G+ R   ++EA 
Sbjct: 926  VPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAW 985

Query: 206  VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
             LF  +  +G+  D I  I+++      G   EA +L   M   G +   +
Sbjct: 986  CLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSER 1036



 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 102/210 (48%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K   + ADL  Y T++ GLC   ++  +  +L +M +  +  +    T L+DA+ K G  
Sbjct: 198 KKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNL 257

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA  L  +ML S I    VT+  LI+GLC  G +  A   F  M   G  PNV  Y  L
Sbjct: 258 DEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTL 317

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+G CK   +E    LF  M +  ++ DT  Y  LI GY +    + A ++ + M   GV
Sbjct: 318 INGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGV 377

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
             D+  +  L+ GL   G +  A V F++M
Sbjct: 378 TPDIITHCILLHGLCVNGEIGSAMVKFNDM 407



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 112/231 (48%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  +++  ++  Y ++I G CI+ +  D+K +   M   G   + V   TL+  + K+  
Sbjct: 816  MIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKR 875

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              + + L  EM    +     T+  LI G C++G +  A   F RM D G+ P++  Y  
Sbjct: 876  VEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNI 935

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L+D LC    IE+A  + +++ K  M  D   Y  +I G  +++  KEA  L   +T  G
Sbjct: 936  LLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKG 995

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
            V LD  AY +++ GL R G  +EA  L   M   G +P E +    L+ HY
Sbjct: 996  VKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHY 1046



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 126/252 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  DL  +  +I   C  S+F  +  LL +M + G   + V   +L++ + +   
Sbjct: 641 MENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNR 700

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+SL+D M +  +E  VV +  +I+GLCK+  +  A++ F  M   G+  +   Y  
Sbjct: 701 FQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNT 760

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC       A  L  +M KR + P+   +TALID ++K  +  EA NL   M    
Sbjct: 761 LISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS 820

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y SL+ G    G L +A+ +F  M+ +G  PD +   +L+    +   +++ +
Sbjct: 821 VHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 880

Query: 241 ELQNEMMGRGLL 252
           +L  EM  +GL+
Sbjct: 881 KLFCEMTHQGLV 892



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 1/241 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEPSEAL 65
           + ++ +Y T+I  LC       +  LL+EM++ G L A+ V   TL+     +GE  +A 
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +L +M   RI   V TF  LID   K G + EA + + +M    + PN   Y +LI+GL
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    +  A+  FD M  +   P+   Y  LI+G+ K    ++ + L  RM   G+  D 
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ G  + G L+ A+ +F  M+  G+ PD I    LL      G +  A+   N+
Sbjct: 347 FTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFND 406

Query: 246 M 246
           M
Sbjct: 407 M 407



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 124/240 (51%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM- 71
           +G+++ G C+ ++  D+  L++ M ++G   N V+  TL+D   K G+ + AL LL+EM 
Sbjct: 138 FGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEME 197

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
              R+   +VT+  L+ GLC SG  R+A      M    ++P+V  +TALID   K+  +
Sbjct: 198 KKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNL 257

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A+ L+ +M +  + P+T  Y +LI+G   H     A    + M   G   ++  Y +L
Sbjct: 258 DEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTL 317

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G  +   +++   LF  M   G++ D     +L+  + + G +  A ++ + M+  G+
Sbjct: 318 INGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGV 377



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 121/238 (50%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G+++ G C  ++F+++  L+  M E GL  N VI  T+++   K  + + AL +   M  
Sbjct: 689 GSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEK 748

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             I    VT+  LI GLC SG   +A      M    + PNV  +TALID   K+  +  
Sbjct: 749 KGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 808

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A+NL+ EM +R + P+   Y +LI+G+       +A ++ + M   G   D+  Y +L+ 
Sbjct: 809 AKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLIT 868

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  +   +++   LF EM  +G++ D     +L+  + + G ++ A ++ N M+  G+
Sbjct: 869 GFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 926



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 117/227 (51%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           +KF+    L  +M+  G++ +    T L+  + +    S AL+LL +M+    + ++VT 
Sbjct: 629 NKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTL 688

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             L++G C+    +EA+     M + GL PNV +Y  +I+GLCK   +  A  +F  M K
Sbjct: 689 GSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEK 748

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           + ++ D   Y  LI G      + +A  L   M +  +D ++  +T+L+    + G+L E
Sbjct: 749 KGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 808

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           A+ L+ EMI R + P+ +   SL+     +G + +A  + + M+ +G
Sbjct: 809 AKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 1/248 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  DL  +  +I   C  S+   +  +L +M + G   + V   +L+  +       +A 
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALIDG 124
           SL+  M+ S  E  VV +  LID LCK+G V  A++    M   G L  ++  Y  L+ G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC      +A  +  +M KR + PD   +TALID ++K  +  EA  L  +M +  +  +
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y SL+ GL   G L  A+  F  M  +G  P+ +   +L+    +   +++ ++L  
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQ 335

Query: 245 EMMGRGLL 252
            M   GL+
Sbjct: 336 RMYREGLV 343



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 107/227 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           KF+D+  L  EM ++    + V  T ++ A  K  +    + L  +M +  I   + +F 
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI   C+      A+   G+M   G  P++    +L++G C+ N  + A +L D M + 
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + P+   Y  +I+G  K+     AL +   M + G+  D   Y +L+ GL   G   +A
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L  +M+ R I P+ I   +L+    + GN+ EA  L  EM+ R +
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSV 821



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 84/181 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  Y T+I G C   + ED   L   M   GL  +T    TL+  Y + G+
Sbjct: 302 MASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGK 361

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +   M+   +   ++T C+L+ GLC +G +  A+  F  M     +  +  Y  
Sbjct: 362 LRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNI 421

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK + +E A  LF  +P   + PD   YT +I G  K+   +EA  L  RM E G
Sbjct: 422 MIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481

Query: 181 V 181
           +
Sbjct: 482 I 482



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 96/217 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   +I  +   Y ++I GLC+  +   +K     M   G   N V   TL++ + K+  
Sbjct: 267 MLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRR 326

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + L   M    +     T+  LI G C+ G +R A D F  M   G+ P++  +  
Sbjct: 327 VEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCI 386

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    I  A   F++M   +      AY  +I G  K +  +EA  L  R+   G
Sbjct: 387 LLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEG 446

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           V  D   YT ++ GL + G  +EA  LF  M   GI+
Sbjct: 447 VKPDARTYTIMILGLCKNGPRREADELFRRMKEDGII 483



 Score = 80.1 bits (196), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 36/221 (16%)

Query: 63  EALSLLDEMLDSRIEVTVV-----------------------------------TFCVLI 87
           +AL L  EM+ S+   +VV                                   +F +LI
Sbjct: 48  DALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILI 107

Query: 88  DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
              C+   +  A+   G+M   G  P++  + +L+ G C +N I  A +L   M K    
Sbjct: 108 HCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYE 167

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVG-VDLDLNAYTSLVWGLSRCGHLQEARV 206
           P+   Y  LID   K+     AL L N M + G +  DL  Y +L+ GL   G  ++A  
Sbjct: 168 PNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAAR 227

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +  +M  R I PD     +L+    ++GN+DEA EL  +M+
Sbjct: 228 ILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQML 268



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 74/166 (44%)

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           G   S    +A+D F  M      P+V  +T L+  +      E       +M    +  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D  ++T LI  + +      AL++  +M ++G D  +  + SL+ G      + +A  L 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
             M+  G  P+ ++  +L+    + G+++ A+EL NEM  +G L+ 
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAA 204



 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 31/141 (21%), Positives = 67/141 (47%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P++  +T ++  + K N  +    LF +M    +  D  ++T LI  + +   F  AL L
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
             +M ++G    +    SL+ G  +    QEA  L   M   G+ P+ ++  +++    +
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732

Query: 233 RGNMDEAIELQNEMMGRGLLS 253
             +++ A+E+   M  +G+++
Sbjct: 733 NRDLNNALEIFYGMEKKGIVA 753


>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 418

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 105/218 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I+ D+  Y  +I GLC ESK  D+  L  EM  NGL  N V  TTL+D + K G 
Sbjct: 197 MHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGS 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+    EML       ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 IDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +      A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D   YT ++    + G ++    L  EM   G +P
Sbjct: 377 LKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVP 414



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 114/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L S M  +G+  +    + L++   K  + ++A  L DEM+ + +    VTF  LIDG C
Sbjct: 193 LKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G +  A++ +  M   G  P++  Y  LI GLCK+  +++A++L DEM  + + PD  
Sbjct: 253 KTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   K RM +  + LD  AYT+L+ GL R G    A  +  EM
Sbjct: 313 TYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G+ PD      ++ +  ++G++    +L  EM   G
Sbjct: 373 LSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDG 411



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 112/213 (52%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+ E G  A+      LM  + K GE   A S+ DE+    +  +VV+F  L++G  + G
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLG 185

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + E       M   G+ P+V  Y+ LI+GLCK++ +  A  LFDEM    ++P+   +T
Sbjct: 186 DLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFT 245

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LIDG+ K  S   A+     M   G   DL  Y +L++GL + G L++A+ L  EM  +
Sbjct: 246 TLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMK 305

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           G+ PD+I   +L+    + G+++ A + +  M+
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFKYKKRMI 338



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 105/209 (50%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +AL       + +  V   T   +++   K    +    +
Sbjct: 64  SDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK+  +  A+++FDE+ K  + P   ++  L++GY++
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIR 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   G+  D+  Y+ L+ GL +   + +A  LF EMIG G++P+ + 
Sbjct: 184 LGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G++D A+E   EM+ +G 
Sbjct: 244 FTTLIDGHCKTGSIDLAMEAYKEMLRQGF 272



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 94/204 (46%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  +++ + K            E+L+     ++  F +L+   CK G +R A   F  + 
Sbjct: 104 CRKVLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEIT 163

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
            +GL P+V  +  L++G  +   ++    L   M    + PD   Y+ LI+G  K     
Sbjct: 164 KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMN 223

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A  L + M   G+  +   +T+L+ G  + G +  A   + EM+ +G  PD I   +L+
Sbjct: 224 DANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLI 283

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
               + G++ +A +L +EM  +GL
Sbjct: 284 YGLCKEGDLKQAQDLIDEMSMKGL 307


>gi|218185204|gb|EEC67631.1| hypothetical protein OsI_35025 [Oryza sativa Indica Group]
          Length = 800

 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K     L  YG++I  L  +   E    L  EM++ GL+ N  I  +++DA  K   
Sbjct: 475 MEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWS 534

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A+ +L +M  S  +  ++TF  LI GLC  G VR+A  +        L+PN   YT 
Sbjct: 535 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 594

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C +  +  A +L  EM  R   PD   + ALI G +      EAL ++ +MTE  
Sbjct: 595 LIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 654

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+N Y  L+ GL +   L  A+ +  EM+ + + PDE +  +L+       N+ +A 
Sbjct: 655 VFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDAR 714

Query: 241 ELQNEMMGRGL 251
           ++   M  +G+
Sbjct: 715 KIFEFMEHKGV 725



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 16/224 (7%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + T+I GLC E     ++  L E     L  N +  T L+  +   GE   A  LL
Sbjct: 553 DIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLL 612

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+       VVTF  LI GL  +G V EA+    +M +  + P+V +Y  LI GLCKK
Sbjct: 613 MEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKK 672

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + +  A+N+ +EM ++++ PD   Y  LIDG+++ E+  +A  +   M   GV  D+ + 
Sbjct: 673 HMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSC 732

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            +++ G  + G + EA                ILC+S ++K  E
Sbjct: 733 NAMIKGYCQFGMMSEA----------------ILCMSNMRKQLE 760



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 111/228 (48%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           + +++D++ L  EM      A+      L+      G   E L L++    +     VV 
Sbjct: 392 QRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVF 451

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           + VLIDG C+ G +   +   G M   G  P +  Y +LI+ L KK  +E+  +LF EM 
Sbjct: 452 YNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMR 511

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           KR + P+   Y ++ID   K  S  +A+ +  +M   G D D+  + +L+ GL   GH++
Sbjct: 512 KRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 571

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +A     E I R + P+++    L+     RG +  A +L  EMMGRG
Sbjct: 572 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRG 619



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 112/249 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G++  AD      ++ GLC+E + E+   L+      G   + V    L+D Y + G+
Sbjct: 405 MLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGD 464

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               L LL EM       T+VT+  LI+ L K G + +    F  M   GL PNV +Y +
Sbjct: 465 MGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNS 524

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK     +A  +  +M      PD   +  LI G       ++A +         
Sbjct: 525 VIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 584

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +  +YT L+ G    G L  A  L  EM+GRG  PD +   +L+      G + EA+
Sbjct: 585 LNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 644

Query: 241 ELQNEMMGR 249
            ++ +M  R
Sbjct: 645 IVREKMTER 653



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 4/223 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            Y  +I G C         LLL EM+  G     V   +L++   K G+  +  SL  EM
Sbjct: 451 FYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEM 510

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               +   V  +  +ID LCK     +A+    +M   G  P++  +  LI GLC +  +
Sbjct: 511 RKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 570

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            +A +   E  +R++ P+  +YT LI G+        A +L   M   G   D+  + +L
Sbjct: 571 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGAL 630

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKH 230
           + GL   G + EA ++  +M  R + PD     +L   L KKH
Sbjct: 631 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKH 673



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+    D+  +G +I GL +  K  ++ ++  +M E  +  +  I   L+    K   
Sbjct: 615 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHM 674

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A ++L+EML+  ++     +  LIDG  +S  + +A   F  M   G+ P++    A
Sbjct: 675 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNA 734

Query: 121 LIDGLCK 127
           +I G C+
Sbjct: 735 MIKGYCQ 741



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 1/168 (0%)

Query: 85  VLIDGLCKSGLVREAIDYFGRMPD-FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
            L+     +G++ +A D   R+ + +G  P V     L+  L ++   + AR L+DEM  
Sbjct: 348 ALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLG 407

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
            D   D  +   L+ G       +E L L       G    +  Y  L+ G  R G +  
Sbjct: 408 EDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGR 467

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L  EM  +G LP  +   SL+    ++G++++   L  EM  RGL
Sbjct: 468 GLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGL 515



 Score = 37.0 bits (84), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 5/155 (3%)

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR-DMIPDTTAYTALIDG 159
           D    M   G  P  A   AL+        + +A ++ + + ++   +P+ T    L+  
Sbjct: 329 DTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKL 388

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTS--LVWGLSRCGHLQEARVLFHEMIGRGIL 217
            ++   + +A  L + M  +G D   + Y++  LV GL   G ++E   L     G G +
Sbjct: 389 LVEQRRWDDARKLYDEM--LGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCI 446

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           P  +    L+  +  RG+M   + L  EM  +G L
Sbjct: 447 PHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFL 481


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 123/241 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D   Y  ++ GL  + K +D   +L E K++G+  N      +++ Y  A  
Sbjct: 548 MMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADR 607

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+SL ++++ +++E++ V + +LI    K+G   EA      M    +HP +  Y++
Sbjct: 608 IDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSS 667

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G+C  + +E A+ +F+EM    ++P+   YTALI GY K     +  ++   MT   
Sbjct: 668 IIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNC 727

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT ++ G  + G+ +EA  L +EMI  GI PD +    L K + +   ++E +
Sbjct: 728 IQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETL 787

Query: 241 E 241
           +
Sbjct: 788 Q 788



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 119/236 (50%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  L   ++   S  +   M   G+  +     T ++AY K G+  EA+ L  +M +  
Sbjct: 212 LMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGG 271

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           +   VVT+  LIDGLCKSG + EA+ + GRM +  ++P++  Y  L++GL K    + A 
Sbjct: 272 VLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEAN 331

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
           ++  EM  +   P+   + ALIDGY +  +  +AL +++ MT  G+  +   + +L+ G 
Sbjct: 332 SVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGF 391

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            R   +++A  +   ++   +  +E  C  +L    +    D A+++   ++ R +
Sbjct: 392 CRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNI 447



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 115/243 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K + A+      +++GLC     E+   +  EM E GL  + +   TL+    K+G+  E
Sbjct: 481 KGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEE 540

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L ++M+    +    T+  L+ GL   G + +         D G+ PN+  Y  +++
Sbjct: 541 AFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLE 600

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G C  + I+ A +LF+++    +      Y  LI  + K  +F EA  L++ M    +  
Sbjct: 601 GYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHP 660

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +  Y+S++ G+     ++EA+ +F EM   G++P+     +L+  + + G MD+   + 
Sbjct: 661 TIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESIL 720

Query: 244 NEM 246
            EM
Sbjct: 721 QEM 723



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 36/280 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T I   C   K +++  L  +M E G+  N V    L+D   K+G   EAL   
Sbjct: 240 DVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFK 299

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M+++++  ++VT+ +L++GL K     EA      M   G  PN  V+ ALIDG  +K
Sbjct: 300 GRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRK 359

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGY---------------------------- 160
             ++ A  + D+M  + + P+   +  L+ G+                            
Sbjct: 360 GNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDAC 419

Query: 161 -------LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG-HLQEARVLFHEMI 212
                   K   F  AL +   +    + ++ +  T LV GL +CG HL+   + F    
Sbjct: 420 SYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLAD 479

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +G+  +     +LL    ERGNM+E   +  EM+ RGL+
Sbjct: 480 KKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLV 519



 Score = 84.7 bits (208), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 120/247 (48%), Gaps = 1/247 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +   L  YG ++ GL    KF+++  +L EM   G + N  +   L+D Y + G   +AL
Sbjct: 307 VNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDAL 366

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + D+M    ++   VT   L+ G C++  + +A      +    L  N    + ++  L
Sbjct: 367 RVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLL 426

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE-VGVDLD 184
           CK +  + A  +   +  R++  + +  T L+ G  K     EA++L  R+ +  G+  +
Sbjct: 427 CKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAAN 486

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
                +L++GL   G+++E   +  EM+ RG++ D I   +L+    + G ++EA +L+ 
Sbjct: 487 TTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKE 546

Query: 245 EMMGRGL 251
           +MM +G 
Sbjct: 547 KMMKQGF 553



 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 35/188 (18%)

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           A D F      G+ P++     L+  L K N + ++  +FD M +  ++ D   Y   I+
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAIN 249

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ---------------- 202
            Y K     EA+ L  +M E GV  ++  Y +L+ GL + G L+                
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309

Query: 203 -------------------EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
                              EA  +  EM  +G  P+E +  +L+  +  +GNMD+A+ ++
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369

Query: 244 NEMMGRGL 251
           ++M  +GL
Sbjct: 370 DDMTLKGL 377


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 117/240 (48%), Gaps = 6/240 (2%)

Query: 13  YGTIIWGLC------IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           YGT+I GLC      I  K+    L  +         N +  + ++D   K G   EA+ 
Sbjct: 199 YGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAIC 258

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L +EM+D  ++  VVTF VLID LCK G V +A      M   G+ PN+  YT+LI G C
Sbjct: 259 LFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFC 318

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
               +  A+ LF  MP +   PD  +Y  LI+GY K    +EA+ L N M  VG+  D+ 
Sbjct: 319 LVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVK 378

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
               L+  L   G + +A+ LF  +    +  D  +C   L    + G + EA++L NE+
Sbjct: 379 TSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNEL 438



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + D+  Y  +I G C   K E++  L +EM   G+  +      L+ A F AG+
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L   +    +   +   C+ +DGLCK+G + EA+  F  +  + +  ++  +  
Sbjct: 393 VDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  LF+++ +  + PD  AY+++I G+ K     +A  L  +M E G
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
              DL  Y+ L+ G      L++   L H MI + + PD+
Sbjct: 513 CSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDD 552



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 123/281 (43%), Gaps = 35/281 (12%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N + ++  Y  II GLC    +E++  L +EM + G+  N V  + L+D   K G+  +A
Sbjct: 232 NCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKA 291

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             LL+ M+   I   + T+  LI G C  G +  A + F  MP  G  P+V  Y  LI+G
Sbjct: 292 KKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLING 351

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTAL---------------------------- 156
            CK   +E A  LF+EM    M PD      L                            
Sbjct: 352 YCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKD 411

Query: 157 -------IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
                  +DG  K+    EA+ L N +    + LD+  +  L+ GL + G L+ A  LF 
Sbjct: 412 LCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFE 471

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           ++   GI PD +   S++    ++G +D+A  L  +M   G
Sbjct: 472 KLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENG 512



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 118/244 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  +L  Y ++I G C+      +K L   M   G   + +    L++ Y K  +  EA+
Sbjct: 303 IVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAM 362

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +EML   +   V T  VL+  L  +G V +A + F  +  + +  ++ +    +DGL
Sbjct: 363 KLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGL 422

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   I  A  LF+E+   +M  D   +  LIDG  K    + A  L  ++ E G+  D 
Sbjct: 423 CKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDA 482

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            AY+S++ G  + G + +A +LF +M   G  PD I    L++  YE   +++ ++L + 
Sbjct: 483 MAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHR 542

Query: 246 MMGR 249
           M+ +
Sbjct: 543 MIEK 546



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 115/254 (45%), Gaps = 6/254 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL     +I  LC  ++  +    ++ +   G   + V  TTL+          EA  L 
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD------FGLHPNVAVYTALI 122
             M        VVT+  LI GLC  G +  A+ +   M +      F   PNV  Y+ +I
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK    E A  LF+EM  + + P+   ++ LID   K     +A  L   M ++G+ 
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIV 304

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +L  YTSL+ G    G L  A+ LF  M  +G  PD I    L+  + +   ++EA++L
Sbjct: 305 PNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKL 364

Query: 243 QNEMMGRGLLSGSK 256
            NEM+  G+    K
Sbjct: 365 FNEMLHVGMWPDVK 378



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 94/181 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+   G ++  L +  K +D+K L   +K   +  +  IC   +D   K G   EA+ L 
Sbjct: 376 DVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLF 435

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +E+    +++ + TF  LIDGLCK+G +  A + F ++ + G+ P+   Y+++I G CKK
Sbjct: 436 NELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKK 495

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +++A  LF +M +    PD   Y+ L+ G+ +    ++ + L +RM E  V  D   Y
Sbjct: 496 GQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIY 555

Query: 189 T 189
            
Sbjct: 556 A 556



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 6/244 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++ GL     +     L  +M   GL  + +    L++        +E L+ +  ++
Sbjct: 94  FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIM 153

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VVTF  LI GLC    + EA   F RM   G  PNV  Y  LI GLC    I 
Sbjct: 154 RRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNIN 213

Query: 133 RARNLFDEMPKR------DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            A     EM         +  P+  +Y+ +IDG  K  +++EA+ L N M + GV  ++ 
Sbjct: 214 IALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVV 273

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            ++ L+  L + G + +A+ L   MI  GI+P+     SL+K     G+++ A EL   M
Sbjct: 274 TFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM 333

Query: 247 MGRG 250
             +G
Sbjct: 334 PSKG 337



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%)

Query: 19  GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
           GLC      ++  L +E++   +  +      L+D   KAG+   A  L +++ +  I+ 
Sbjct: 421 GLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQP 480

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
             + +  +I G CK G V +A   F +M + G  P++  Y+ L+ G  + N +E+   L 
Sbjct: 481 DAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLL 540

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
             M ++D+ PD   Y  + D   K E +KE L+L  R 
Sbjct: 541 HRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRF 578



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 6/197 (3%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S+  SL  +M  + +   ++T  +LI+ LC    + E +     +   G  P+V  +T L
Sbjct: 108 SQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTL 167

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I GLC ++ I  A  LF  M K    P+   Y  LI G     +   AL     M     
Sbjct: 168 IKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTS 227

Query: 182 DLDLN------AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
               N      +Y+ ++ GL + G+ +EA  LF+EM+ +G+ P+ +    L+    + G 
Sbjct: 228 PYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQ 287

Query: 236 MDEAIELQNEMMGRGLL 252
           + +A +L   M+  G++
Sbjct: 288 VIKAKKLLEMMIQIGIV 304



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 11/196 (5%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           ++A    D M+ S     + +F  L+ GL K     +    + +M   GL P++     L
Sbjct: 78  TQAHQFFDLMMRS-----IFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNIL 132

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+ LC  N I         + +R  IPD   +T LI G        EA  L  RM ++G 
Sbjct: 133 INCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGC 192

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR------GILPDEILCISLLKKHYERGN 235
             ++  Y +L+ GL   G++  A     EM+           P+ I    ++    + GN
Sbjct: 193 TPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGN 252

Query: 236 MDEAIELQNEMMGRGL 251
            +EAI L NEM+ +G+
Sbjct: 253 WEEAICLFNEMVDQGV 268



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 66/127 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  N+K D+  +G +I GLC   K E +  L  ++ E G+  + +  ++++  + K G+
Sbjct: 438 LESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQ 497

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  +M ++     ++T+ +L+ G  +S  + + +    RM +  + P+  +Y  
Sbjct: 498 VDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAI 557

Query: 121 LIDGLCK 127
           + D +CK
Sbjct: 558 VEDMVCK 564



 Score = 46.6 bits (109), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 22/101 (21%), Positives = 52/101 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D   Y ++I G C + + + + +L  +M+ENG + + +  + LM  ++++ +  + +
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
            LL  M++  +      + ++ D +CK    +E +D   R 
Sbjct: 538 QLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRF 578


>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 418

 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 110/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+  L  EM +N L  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVV 417



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 118/221 (53%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD+ +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +  G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+  + + G+++ A + +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMI 338



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 101/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  LF EM+   ++P+ + 
Sbjct: 184 LGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  119 bits (299), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 7/249 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +   +  Y ++I GLC  +  +++  LL EM  NG+  N    ++LMD   K+G 
Sbjct: 217 MEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGH 276

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A+ LL+ M+  R+   +VT+  LI+GLCK G  REA++   RM   GL P+  +Y  
Sbjct: 277 SSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGR 336

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT-------ALIDGYLKHESFKEALNLK 173
           +I GLC     + A N  DEM    + P+  ++T        ++ G   +     A  L 
Sbjct: 337 IISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLY 396

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
             M   G+ +++  +  LV    + G L +A  +  EMI  G +PDE +   L+   ++R
Sbjct: 397 LSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDR 456

Query: 234 GNMDEAIEL 242
             + E  EL
Sbjct: 457 KKVRETTEL 465



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 115/231 (49%), Gaps = 1/231 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCI-ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M+ K I   +     +I  LC  E   E +  L  EM   G   ++    TL++   K G
Sbjct: 146 MREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLG 205

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           + S+A  LLDEM +  +  +VV++  LI GLC+S  + EAI+    M   G+ PNV  Y+
Sbjct: 206 KISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYS 265

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +L+DGLCK     +A  L + M +R ++P+   Y+ LI+G  K    +EA+ + +RM   
Sbjct: 266 SLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQ 325

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           G+  D   Y  ++ GL    + QEA     EM   GI P+       +K H
Sbjct: 326 GLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMH 376



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 1/248 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + D   +G +I  L   ++F  ++ +L  MK+        +  T+   Y +   P +A+
Sbjct: 46  FRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAI 105

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M D +++ T  ++  + D L +   V+ AI ++  M + G+ P V     LI  L
Sbjct: 106 RVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKAL 165

Query: 126 CK-KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           CK +  +E A  LF EMP R   PD+  Y  LI+G  K     +A  L + M E G+   
Sbjct: 166 CKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPS 225

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           + +YTSL+ GL +  +L EA  L  EMI  GI P+     SL+    + G+  +A+EL  
Sbjct: 226 VVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLE 285

Query: 245 EMMGRGLL 252
            M+ R LL
Sbjct: 286 VMVRRRLL 293



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 1/203 (0%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG-LVREAIDYFGRMPD 108
           T+ D   +      A+    EM +  I  TVV+  +LI  LCK+   V  A   F  MP+
Sbjct: 125 TVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPN 184

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            G  P+   Y  LI+GLCK   I +A+ L DEM ++ + P   +YT+LI G  +  +  E
Sbjct: 185 RGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDE 244

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A+ L   M   G++ ++  Y+SL+ GL + GH  +A  L   M+ R +LP+ +   +L+ 
Sbjct: 245 AIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLIN 304

Query: 229 KHYERGNMDEAIELQNEMMGRGL 251
              + G   EA+E+ + M  +GL
Sbjct: 305 GLCKEGKHREAVEILDRMRLQGL 327


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  D+  +   +   CI  +   +  LL+ M   G   N V    ++  ++K   
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I   ++TF  LI  LCK G V+E+   F ++   G+ PN+  +  
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I GLC+K  I+ A  L + +    + PD  +Y  LI G+ KH    EA    ++M   G
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ +   Y +++ G  + G +Q A  +  + + +G +PDE    SL+      G+M+ A+
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 241 ELQNEMMGRGL 251
            +  E M +G 
Sbjct: 377 AVFYEAMEKGF 387



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII G C     +++  +L +    G   +    ++L++     G+ + A+++  E +
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   + +++ +  L+ GL K GLV +A+     M + G  P++  Y  +++GLCK  C+ 
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + ++   +  IPD   +  LIDGY K  +  +A+ + + M   G+  D+  Y +L+
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +   L      F  M+ +G  P+ I    L++   +   + EA+EL  EM  RGL
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 109/240 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+  L     F  +  +   MK+ G+  +    T  M ++   G P+ AL LL+ M 
Sbjct: 114 YNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMP 173

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E   V++C +I G  K     EA   F  M   G+ P++  +  LI  LCKK  ++
Sbjct: 174 GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQ 233

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            +  LF ++ KR + P+   +   I G  +  +  EA  L   +   G+  D+ +Y +L+
Sbjct: 234 ESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLI 293

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   L EA    H+M+  G+ P+E    +++    + G M  A ++  + M +G +
Sbjct: 294 CGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI 353



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  +  +I  LC +   ++S+ L S++ + G+  N       +    + G 
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ ++   +   V+++  LI G CK   + EA  Y  +M + G+ PN   Y  
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK---------------HES 165
           +I+G CK   ++ A  +  +   +  IPD   Y++LI+G                   + 
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386

Query: 166 FK--------------------EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           FK                    +AL L   M E G   D+  Y  +V GL + G L +A 
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + ++ I +G +PD     +L+  + ++ NMD+AIE+ + M+  G+
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGI 492



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 107/230 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I GLC +     +  +  E  E G   + ++  TL+    K G   +AL L+ +M+
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      + T+ ++++GLCK G + +A          G  P++  +  LIDG CK+  ++
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + D M    + PD   Y  L++G  K       ++    M E G   ++  Y  L+
Sbjct: 479 KAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
               +   + EA  LF EM  RG+ PD +   +L+      G +D+A EL
Sbjct: 539 ESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 1/222 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  Y T++ GLC   K ++       M E G T N +    L++++ K  +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
            SEA+ L  EM    +   +VT C LI GLC +G + +A + F  +  ++    + A++ 
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I+  C+K  +  A  LF +M   D  PD   Y  +ID Y K  +   A          
Sbjct: 607 IMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           G+         ++  L     L EA V+ + M+  GI+P+E+
Sbjct: 667 GLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 123/248 (49%), Gaps = 3/248 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTV--ICTTLMDAYFKAGEPSE 63
            K  L  Y  +I  L +  KFE  + +L+EM++N + +  +  +   +M  Y + G+  E
Sbjct: 36  FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKN-VDSKMLEGVYIGIMRDYGRKGKVQE 94

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+++ + M     E +V ++  +++ L + G   +A   + RM D G++P+V  +T  + 
Sbjct: 95  AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMK 154

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             C       A  L + MP +    +  +Y A+I G+ K     EA +L + M + G+  
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICP 214

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  +  L+  L + G++QE+  LF +++ RG+ P+       ++    +G +DEA  L 
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLL 274

Query: 244 NEMMGRGL 251
             ++  GL
Sbjct: 275 ESIVSEGL 282



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 113/250 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+  + +   Y  +I G   E+   ++  L  EM + G+  + +    L+    K G 
Sbjct: 172 MPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGN 231

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  L  +++   +   + TF + I GLC+ G + EA      +   GL P+V  Y  
Sbjct: 232 VQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNT 291

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK + +  A     +M    + P+   Y  +I+G+ K    + A  +       G
Sbjct: 292 LICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y+SL+ GL   G +  A  +F+E + +G     IL  +L+K   ++G + +A+
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411

Query: 241 ELQNEMMGRG 250
           +L  +MM  G
Sbjct: 412 QLMKDMMEHG 421



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 97/205 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K  + LY T++ GL  +     +  L+ +M E+G + +      +++   K G  S+
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +L++ +       + TF  LIDG CK   + +AI+    M   G+ P+V  Y  L++
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   ++   + F  M ++   P+   Y  LI+ + K     EA+ L   M   G+  
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLF 208
           D+    +L+ GL   G L +A  LF
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELF 589



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 112/250 (44%), Gaps = 1/250 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + T+I G C +   + +  +L  M  +G+T + +   TL++   KA +    +   
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTF 519

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             ML+      ++T+ +LI+  CK   V EA++ F  M   GL P++     LI GLC  
Sbjct: 520 KAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSN 579

Query: 129 NCIERARNLFDEMPKRDMIPDTTA-YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
             +++A  LF  + K      +TA +  +I+ + +  +   A  L ++M       D   
Sbjct: 580 GELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYT 639

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  ++    + G++  A     E I +G++P    C  +L        + EA+ + N M+
Sbjct: 640 YRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMV 699

Query: 248 GRGLLSGSKN 257
             G++    N
Sbjct: 700 QNGIVPEEVN 709


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 123/249 (49%), Gaps = 1/249 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMK-ENGLTANTVICTTLMDAYFKAGEPSE 63
           +++ D+ +Y T+I GLC   + ++   L+  M+ + G   +T+    L+D + KAGE  +
Sbjct: 378 SVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEK 437

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              L DEM    +   VVT   L+ G+C++G V  A+++F      G+  +   YTALI+
Sbjct: 438 GKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALIN 497

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             C  N  E+A  LF+EM K    PD   Y  LI G+ +     +A  +   + ++G+  
Sbjct: 498 AFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRP 557

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D   Y +L+ G  R         +  EM   G+ PD I   +L+    + G++  A ++ 
Sbjct: 558 DTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVM 617

Query: 244 NEMMGRGLL 252
            +M+  G++
Sbjct: 618 RKMIKAGVV 626



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 9/246 (3%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G +I  LC   K      L +EM + G    +  C +L+    + G  +    L+++M++
Sbjct: 274 GRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVE 333

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP--------DFGLHPNVAVYTALIDGL 125
             I+  VVTF +LI+ +CK   V +A++   +M            + P+V +Y  LIDGL
Sbjct: 334 MDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGL 393

Query: 126 CKKNCIERARNLFDEM-PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           CK    +    L + M  ++   PDT  Y  LIDG+ K    ++   L + M + GV  +
Sbjct: 394 CKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPN 453

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +    +LV G+ R G +  A   F E   RG+  D +   +L+       N ++A+EL N
Sbjct: 454 VVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFN 513

Query: 245 EMMGRG 250
           EM+  G
Sbjct: 514 EMLKSG 519



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 1/206 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K   I+ D   Y T+I G C  +KF     +L EM+E GL  +T+   TL+    K G+
Sbjct: 550 LKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGD 609

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYT 119
              A  ++ +M+ + +  TV T+  +I+  C +G   EA++ F  M     + PN  +Y 
Sbjct: 610 LKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYN 669

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LI+ LCK N ++ A +L ++M    + P+TT Y A+  G    +  ++     +RM E 
Sbjct: 670 ILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEH 729

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEAR 205
             + D      L   LS  G ++  +
Sbjct: 730 ACNPDYITMEILTEWLSAVGEIERLK 755



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++    T++ G+C   +   +     E +  G+  + V  T L++A+     
Sbjct: 445 MNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNN 504

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L +EML S      + +  LI G  ++G + +A      +   G+ P+   Y  
Sbjct: 505 FEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNT 564

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C+ N   R   +  EM +  + PDT  Y  LI    K+   K A  +  +M + G
Sbjct: 565 LIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAG 624

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEA 239
           V   +  Y +++      G+  EA  +F +M     +P   +  ++L     + N +  A
Sbjct: 625 VVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSA 684

Query: 240 IELQNEM 246
           + L  +M
Sbjct: 685 VSLMEDM 691


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 127/243 (52%), Gaps = 7/243 (2%)

Query: 13  YGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y T+I  LC  S+ +++  +LL   K +G + + V  T ++   F  GE S+A +L +EM
Sbjct: 239 YNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEM 298

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   +   VVT+  ++  LCK+  + +A     +M D  + P+   YTA+I G    +C+
Sbjct: 299 VQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGY---SCL 355

Query: 132 ER---ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
            R   A  +F EM +  +IPD   + +L+D   KH+  KEA  + + +   G   D+ +Y
Sbjct: 356 GRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISY 415

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           + L+ G +  G   +   LFH M   GI+ D      L+  H +RG MDEA+ +  EM G
Sbjct: 416 SILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRG 475

Query: 249 RGL 251
           +G+
Sbjct: 476 QGV 478



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 126/250 (50%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KG     D+  Y  +I GL +E +   +  L +EM + G+  N V   +++ A  KA   
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +A  +L +M D+ I+   VT+  +I G    G  +EA   F  M   GL P++  + +L
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +D LCK    + A  +F  +  +   PD  +Y+ L+ GY     F +  NL + MT+ G+
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D + +  L+   ++ G + EA ++F EM G+G+ P+ +   +++      G + +A+E
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 242 LQNEMMGRGL 251
             ++M+  GL
Sbjct: 504 KLSQMISIGL 513



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 119/248 (47%), Gaps = 3/248 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G+ +  ++  Y T+I  LC   +  D+   LS+M   GL  NTV+  +L+  +   G+
Sbjct: 473 MRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGD 532

Query: 61  PSEALSLLDEMLDSRIEVTVVT-FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             +A  L+ EM+D  I    +T F  +I  LC  G V  A D F  +   G  P++  + 
Sbjct: 533 LIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFN 592

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LIDG C    +++A  + D M      PD   Y+ LI+GY K     + L L   M   
Sbjct: 593 SLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCK 652

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDE 238
            V      Y+ ++ GL R G    A+ +FHEMI  G     I   +++ +   R N  DE
Sbjct: 653 RVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGT-AMSISTYTIILQGLCRNNCTDE 711

Query: 239 AIELQNEM 246
           AI L +++
Sbjct: 712 AITLFHKL 719



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  ++  Y +I+  LC     + ++L+L +M +N +  + V  T ++  Y   G 
Sbjct: 298 MVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGR 357

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +  EM    +   +VTF  L+D LCK    +EA + F  +   G  P++  Y+ 
Sbjct: 358 WKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSI 417

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   +       NLF  M    ++ D+  +  LI+ + K     EAL +   M   G
Sbjct: 418 LLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQG 477

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y +++  L R G L +A     +MI  G+ P+ ++  SL++     G++ +A 
Sbjct: 478 VSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAK 537

Query: 241 ELQNEMMGRGL 251
           EL +EMM +G+
Sbjct: 538 ELVSEMMDQGI 548



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 119/233 (51%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  + ++I G C+  K + +  +L  M   G   + V  +TL++ YFK+G   + L 
Sbjct: 585 RPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLI 644

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EML  R++ T VT+ +++DGL ++G    A   F  M + G   +++ YT ++ GLC
Sbjct: 645 LFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLC 704

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           + NC + A  LF ++   ++  +      +I    K +  +EA +L   ++  G+  + +
Sbjct: 705 RNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNAS 764

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            Y  ++  L + G ++EA ++F  M   G  P   L   +++   ++G + +A
Sbjct: 765 TYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 123/254 (48%), Gaps = 8/254 (3%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + +II  LC E +  +++ + + +   G   +     +L+D Y   G+  +A  
Sbjct: 550 RPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFG 609

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +LD M+ +  E  VVT+  LI+G  KSG + + +  F  M    + P    Y+ ++DGL 
Sbjct: 610 VLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLF 669

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +      A+ +F EM +       + YT ++ G  ++    EA+ L +++  + +  ++ 
Sbjct: 670 RAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIA 729

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE----ILCISLLKKHYERGNMDEAIEL 242
              +++  L +    +EA  LF  +   G++P+     ++ I+LLK+    G+++EA  +
Sbjct: 730 ILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKE----GSVEEADIM 785

Query: 243 QNEMMGRGLLSGSK 256
            + M   G    S+
Sbjct: 786 FSSMEKTGCAPSSR 799



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 87/180 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D+  Y T+I G     + +D  +L  EM    +   TV  + ++D  F+AG 
Sbjct: 614 MVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGR 673

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  +  EM++S   +++ T+ +++ GLC++    EAI  F ++    L   +A+   
Sbjct: 674 TSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNT 733

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L K    E A +LF  +    ++P+ + Y  +I   LK  S +EA  + + M + G
Sbjct: 734 MIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTG 793


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  D+  +   +   CI  +   +  LL+ M   G   N V    ++  ++K   
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L DEML   I   ++TF  LI  LCK G V+E+   F ++   G+ PN+  +  
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI 256

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I GLC+K  I+ A  L + +    + PD  +Y  LI G+ KH    EA    ++M   G
Sbjct: 257 FIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSG 316

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ +   Y +++ G  + G +Q A  +  + + +G +PDE    SL+      G+M+ A+
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 241 ELQNEMMGRGL 251
            +  E M +G 
Sbjct: 377 AVFYEAMEKGF 387



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII G C     +++  +L +    G   +    ++L++     G+ + A+++  E +
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   + +++ +  L+ GL K GLV +A+     M + G  P++  Y  +++GLCK  C+ 
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + ++   +  IPD   +  LIDGY K  +  +A+ + + M   G+  D+  Y +L+
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +   L      F  M+ +G  P+ I    L++   +   + EA+EL  EM  RGL
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 109/240 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+  L     F  +  +   MK+ G+  +    T  M ++   G P+ AL LL+ M 
Sbjct: 114 YNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMP 173

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E   V++C +I G  K     EA   F  M   G+ P++  +  LI  LCKK  ++
Sbjct: 174 GQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQ 233

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            +  LF ++ KR + P+   +   I G  +  +  EA  L   +   G+  D+ +Y +L+
Sbjct: 234 ESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLI 293

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G  +   L EA    H+M+  G+ P+E    +++    + G M  A ++  + M +G +
Sbjct: 294 CGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI 353



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  +  +I  LC +   ++S+ L S++ + G+  N       +    + G 
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ ++   +   V+++  LI G CK   + EA  Y  +M + G+ PN   Y  
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK---------------HES 165
           +I+G CK   ++ A  +  +   +  IPD   Y++LI+G                   + 
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386

Query: 166 FK--------------------EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           FK                    +AL L   M E G   D+  Y  +V GL + G L +A 
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDAN 446

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            + ++ I +G +PD     +L+  + ++ NMD+AIE+ + M+  G+
Sbjct: 447 GILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGI 492



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 107/230 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I GLC +     +  +  E  E G   + ++  TL+    K G   +AL L+ +M+
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      + T+ ++++GLCK G + +A          G  P++  +  LIDG CK+  ++
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  + D M    + PD   Y  L++G  K       ++    M E G   ++  Y  L+
Sbjct: 479 KAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILI 538

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
               +   + EA  LF EM  RG+ PD +   +L+      G +D+A EL
Sbjct: 539 ESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 1/222 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+  Y T++ GLC   K ++       M E G T N +    L++++ K  +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
            SEA+ L  EM    +   +VT C LI GLC +G + +A + F  +  ++    + A++ 
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFN 606

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I+  C K  +  A  LF +M   D  PD   Y  +ID Y K  +   A          
Sbjct: 607 IMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           G+         ++  L     L EA V+ + M+  GI+P+E+
Sbjct: 667 GLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 123/248 (49%), Gaps = 3/248 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTV--ICTTLMDAYFKAGEPSE 63
            K  L  Y  +I  L +  KFE  + +L+EM++N + +  +  +   +M  Y + G+  E
Sbjct: 36  FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKN-VDSKMLEGVYIGIMRDYGRKGKVQE 94

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+++ + M     E +V ++  +++ L + G   +A   + RM D G++P+V  +T  + 
Sbjct: 95  AVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMK 154

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             C       A  L + MP +    +  +Y A+I G+ K     EA +L + M + G+  
Sbjct: 155 SFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICP 214

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  +  L+  L + G++QE+  LF +++ RG+ P+       ++    +G +DEA  L 
Sbjct: 215 DILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLL 274

Query: 244 NEMMGRGL 251
             ++  GL
Sbjct: 275 ESIVSEGL 282



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 113/250 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+  + +   Y  +I G   E+   ++  L  EM + G+  + +    L+    K G 
Sbjct: 172 MPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGN 231

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  L  +++   +   + TF + I GLC+ G + EA      +   GL P+V  Y  
Sbjct: 232 VQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNT 291

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK + +  A     +M    + P+   Y  +I+G+ K    + A  +       G
Sbjct: 292 LICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y+SL+ GL   G +  A  +F+E + +G     IL  +L+K   ++G + +A+
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411

Query: 241 ELQNEMMGRG 250
           +L  +MM  G
Sbjct: 412 QLMKDMMEHG 421



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 97/205 (47%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K  K  + LY T++ GL  +     +  L+ +M E+G + +      +++   K G  S+
Sbjct: 385 KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSD 444

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +L++ +       + TF  LIDG CK   + +AI+    M   G+ P+V  Y  L++
Sbjct: 445 ANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLN 504

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK   ++   + F  M ++   P+   Y  LI+ + K     EA+ L   M   G+  
Sbjct: 505 GLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLF 208
           D+    +L+ GL   G L +A  LF
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELF 589



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 111/250 (44%), Gaps = 1/250 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + T+I G C +   + +  +L  M  +G+T + +   TL++   KA +    +   
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTF 519

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             ML+      ++T+ +LI+  CK   V EA++ F  M   GL P++     LI GLC  
Sbjct: 520 KAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSN 579

Query: 129 NCIERARNLFDEMPKRDMIPDTTA-YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
             +++A  LF  + K      +TA +  +I+ +    +   A  L ++M       D   
Sbjct: 580 GELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYT 639

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  ++    + G++  A     E I +G++P    C  +L        + EA+ + N M+
Sbjct: 640 YRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMV 699

Query: 248 GRGLLSGSKN 257
             G++    N
Sbjct: 700 QNGIVPEEVN 709


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 116/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L S M  +G+  +    + L++   K  +  +A  L DEMLD  +    VTF  LIDG C
Sbjct: 197 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHC 256

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 257 KNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKI 316

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 317 SYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREM 376

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G+ PD      ++ +  ++G++    +L  EM   G
Sbjct: 377 LSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 415



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 108/221 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK +D+  L  EM + GL  N V  TTL+D + K G 
Sbjct: 201 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 260

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 261 VDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTT 320

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M + ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 321 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVG 380

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   YT ++    + G +     L  EM   G +P  +
Sbjct: 381 LRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 421



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 116/213 (54%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+ E G  A+      LM  + K G+   ALS+ D +    +  +VV+F  L++G  + G
Sbjct: 130 EILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLG 189

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + E       M   G+ P+V  Y+ LI+GLCK++ ++ A  LFDEM  + ++P+   +T
Sbjct: 190 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFT 249

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LIDG+ K+     A+ +  +M    +  DL  Y +L++GL + G L++A+ L  EM  +
Sbjct: 250 TLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMK 309

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 310 GLKPDKISYTTLIDGCCKEGDLETAFEHRKRMI 342



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 76/159 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +++  DL  Y T+I+GLC +   + ++ L+ EM+  GL  + +  TTL+D   K G+
Sbjct: 271 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGD 330

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A      M+   I +  V +  LI GLC+ G   +A      M   GL P+   YT 
Sbjct: 331 LETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTM 390

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +I+  CKK  +     L  EM +   +P    Y  L++G
Sbjct: 391 IINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 122/265 (46%), Gaps = 18/265 (6%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSK----LLLSEMKENGLTA--------------NTV 46
             +  L  Y T+I  LC      ++K    +++S   +N  +A              +  
Sbjct: 12  TFRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAILETQGTQRSDIY 71

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    ++  +
Sbjct: 72  VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEI 131

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            + G   ++  +  L+   CK+  I  A ++FD + K  + P   ++  L++GY++    
Sbjct: 132 LECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDL 191

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
            E   LK+ M   GV  D+  Y+ L+ GL +   + +A  LF EM+ +G++P+ +   +L
Sbjct: 192 DEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTL 251

Query: 227 LKKHYERGNMDEAIELQNEMMGRGL 251
           +  H + G +D A+E+  +M+ + L
Sbjct: 252 IDGHCKNGRVDLAMEVYKQMLSQSL 276



 Score = 44.7 bits (104), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 75/173 (43%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           +  F  LI    +SG +R+AI+ +    +            +++ L K    +     + 
Sbjct: 70  IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYK 129

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           E+ +         +  L+  + K    + AL++ + +T+ G+   + ++ +L+ G  R G
Sbjct: 130 EILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLG 189

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L E   L   M   G+ PD      L+    +   MD+A EL +EM+ +GL+
Sbjct: 190 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLV 242


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 127/241 (52%), Gaps = 2/241 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENG--LTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           Y T+I  LC +S+ +++  ++  M + G   + + V   T++  +FK GE S+A +L++E
Sbjct: 230 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINE 289

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M+   +E  VVT+  ++D LCK+  + +A     +M D G+ P+   YTA+I G      
Sbjct: 290 MVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGH 349

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
            + +  +F +M  + +IP    + + +    KH   K+A  +   MT  G   DL +Y+ 
Sbjct: 350 WKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSI 409

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ G +  G   +   LFH M  +GI+ +      L+  H +RG MDEA+ +  EM G+G
Sbjct: 410 LLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQG 469

Query: 251 L 251
           +
Sbjct: 470 V 470



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D+  Y +I+  LC     + ++L+L +M + G+  + +  T ++  Y  +G 
Sbjct: 290 MVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGH 349

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  +  +M    +   +VTF   +  LCK G  ++A + F  M   G  P++  Y+ 
Sbjct: 350 WKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSI 409

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   +       NLF  M  + ++ +   +  LI  + K     EA+ +   M   G
Sbjct: 410 LLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQG 469

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y++L+    R G L +A   F +MI  G+ P+ ++  SL+      G++ +A 
Sbjct: 470 VRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAK 529

Query: 241 ELQNEMMGRGL 251
           EL +EMM +G+
Sbjct: 530 ELVSEMMSKGI 540



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 112/227 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + ++I G C+  K E +  +L  M   G+  + V   TL+  Y K+G+  + L L  EML
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREML 642

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             +++ T VT+ +++DGL  +G    A   F  M D G   ++  Y  L+ GLC+ +  +
Sbjct: 643 HKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTD 702

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF ++   D   D T    +I+   K    +EA +L   ++  G+  +++ Y  ++
Sbjct: 703 EAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMI 762

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             L + G ++EA  +F  M   G  P   L   +++   ++G++ +A
Sbjct: 763 HNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 809



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 88/180 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ D+  Y T++ G C   K +D  +L  EM    +   TV  + ++D  F AG 
Sbjct: 606 MVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGR 665

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  +  EM+DS   V + T+ +L+ GLC++ L  EAI  F ++       ++ +   
Sbjct: 666 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNT 725

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ L K    E A +LF  +    ++P+ + Y  +I   LK  S +EA  + + M + G
Sbjct: 726 VINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSG 785



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 1/257 (0%)

Query: 1   MKGKNI-KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M  K I + ++  + +II  LC E +  D+  + + +   G     V   +L+D Y   G
Sbjct: 535 MMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVG 594

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  +A  +LD M+   IE  VVT+  L+ G CKSG + + +  F  M    + P    Y+
Sbjct: 595 KMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYS 654

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            ++DGL        A+ +F EM       D   Y  L+ G  +++   EA+ L +++  +
Sbjct: 655 IVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAM 714

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
               D+    +++  L +    +EA  LF  +   G++P+      ++    + G+++EA
Sbjct: 715 DCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEA 774

Query: 240 IELQNEMMGRGLLSGSK 256
             + + M   G    S+
Sbjct: 775 DTMFSSMEKSGCAPSSR 791



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 3/207 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-GRMPDF 109
           LMD   +A  P    +    +L + +    +     +  LC +    EA+D    RM D 
Sbjct: 162 LMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDL 221

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD--MIPDTTAYTALIDGYLKHESFK 167
           G  PN   Y  +I  LC  +  + A ++   M K      PD  ++  +I G+ K     
Sbjct: 222 GCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVS 281

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A NL N M + GV+ D+  Y S+V  L +   + +A ++  +M+ +G+ PD +   +++
Sbjct: 282 KACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAII 341

Query: 228 KKHYERGNMDEAIELQNEMMGRGLLSG 254
             +   G+  E+ ++  +M  +GL+ G
Sbjct: 342 HGYSCSGHWKESAKMFRKMTSKGLIPG 368


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 119/233 (51%), Gaps = 1/233 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ G C     +D+  L   M + G+  N + C+TL+D +FK+G+  +AL+L  E L
Sbjct: 457 YNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETL 516

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +     TF  +I+GLCK   + EA +   +M  +   P++  Y  L  G CK   ++
Sbjct: 517 ARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMD 576

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  + +E+      P    + +LI G+   +   +  ++   M+  G+  +  AY +L+
Sbjct: 577 RASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALI 636

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA-IELQN 244
            G  + G L  A  L+ EMI +G++P+  +C SL+   Y +G  DEA + LQN
Sbjct: 637 AGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQN 689



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ +L  Y  ++ G C   +  D++ +L  +   G + N V  T L+  Y     
Sbjct: 269 MTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKN 328

Query: 61  PSEALSLLDEML-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             EA  ++ E+  + ++ V    F  +I+G C+ G + +A      M D  L  N+ VY 
Sbjct: 329 MEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYN 388

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I+G CK   +  A N+  EM    + PDT +Y +L+DGY K     +A    N M   
Sbjct: 389 IMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRN 448

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G       Y +L+ G    G + +A  L+  M+ +GI P+EI C +LL   ++ G  ++A
Sbjct: 449 GFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKA 508

Query: 240 IELQNEMMGRGL 251
           + L  E + RGL
Sbjct: 509 LNLWKETLARGL 520



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 120/250 (48%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K K +  D  ++G +I G C   + ED+  LL+EM ++ L  N  +   +++ Y K G  
Sbjct: 341 KNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRM 400

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA ++L EM    +     ++  L+DG CK GL+ +A + +  M   G       Y AL
Sbjct: 401 VEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNAL 460

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           + G C    I+ A  L+  M K+ + P+  + + L+DG+ K    ++ALNL       G+
Sbjct: 461 LKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGL 520

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             +   + +++ GL +   + EA  L  +M      PD I   +L   + + G+MD A  
Sbjct: 521 AKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASR 580

Query: 242 LQNEMMGRGL 251
           + NE+   G 
Sbjct: 581 ILNELENLGF 590



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 99/198 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           + G N  +   ++  +I+GLC   + ED+K LL+++K+ G  A+    ++L+     +G 
Sbjct: 716 VAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGF 775

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L D ML   +   +VT+  LI GLCKSG +  A+  F ++   G+ PN   Y  
Sbjct: 776 VDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNT 835

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID  CK   I  A  L   M +  + P    Y+ LI+G       +EA+ L ++M E  
Sbjct: 836 LIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENN 895

Query: 181 VDLDLNAYTSLVWGLSRC 198
           VD +   Y +L+ G  RC
Sbjct: 896 VDPNYVTYWTLIQGYVRC 913



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 11/252 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  +   YG +I G C E     +  L  EM E GL  N  IC++L+  +++ G+
Sbjct: 620 MSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGK 679

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL-VREAIDYFGRMPDFGLHPNVAVYT 119
             EA  +L  ++ +           +I  +    L + +  ++   +     H    ++ 
Sbjct: 680 FDEANLVLQNLVGTD----------MIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWN 729

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I GLCK   IE A+NL  ++  +  + D   Y++LI G         A +L++ M  V
Sbjct: 730 IVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSV 789

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  ++  Y SL++GL + G L  A  LF ++  +GI P+ I   +L+ KH + G + EA
Sbjct: 790 GLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEA 849

Query: 240 IELQNEMMGRGL 251
            +L+  M+  G+
Sbjct: 850 FKLKQRMIEEGI 861



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ +L +Y  +I G C   +  ++  +L EM   G+  +T    +L+D Y K G 
Sbjct: 375 MVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGL 434

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A    + ML +    T +T+  L+ G C  G + +A+  +  M   G+ PN    + 
Sbjct: 435 MNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCST 494

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG  K    E+A NL+ E   R +  +TT +  +I+G  K E   EA  L ++M +  
Sbjct: 495 LLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWR 554

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +L  G  + G +  A  + +E+   G  P      SL+  H+      +  
Sbjct: 555 CPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVN 614

Query: 241 ELQNEMMGRGL 251
           ++  EM  RGL
Sbjct: 615 DILFEMSNRGL 625



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/166 (36%), Positives = 86/166 (51%), Gaps = 2/166 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAG 59
           +K K   AD   Y ++I G C  S F D    L   M   GLT N V   +L+    K+G
Sbjct: 751 LKDKGFVADNFTYSSLIHG-CSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSG 809

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           E S A+SL  ++    I    +T+  LID  CK G + EA     RM + G+HP V  Y+
Sbjct: 810 ELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYS 869

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            LI+GLC +  +E A  L D+M + ++ P+   Y  LI GY++ ES
Sbjct: 870 ILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCES 915



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 106/256 (41%), Gaps = 36/256 (14%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +  EM+  G   +   C ++++   + G+    +++ ++M  +       T  ++    C
Sbjct: 195 VFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYC 254

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K   V  A+++   M   G+  N+  Y A+++G C+      AR + D +P R   P+  
Sbjct: 255 KVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIV 314

Query: 152 AYTALIDGYLKHESFKE------------------------------------ALNLKNR 175
            YT L+ GY   ++ +E                                    A  L N 
Sbjct: 315 TYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNE 374

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           M +  + ++L  Y  ++ G  + G + EA  + HEM G G+ PD     SL+  + ++G 
Sbjct: 375 MVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGL 434

Query: 236 MDEAIELQNEMMGRGL 251
           M++A E  N M+  G 
Sbjct: 435 MNKAFETYNTMLRNGF 450



 Score = 63.5 bits (153), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 76/164 (46%)

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
              +  +F +L+  L  +G +  A+  F  M   G   ++    ++++ L +   +    
Sbjct: 169 FSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATV 228

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            +F++M +   +PD      +   Y K +    AL     MT++GV+++L AY +++ G 
Sbjct: 229 AVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGY 288

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
              G   +AR +   + GRG  P+ +    L+K +    NM+EA
Sbjct: 289 CEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEA 332


>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 418

 Score =  119 bits (299), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 126/250 (50%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           +++  +  + T++ G       ++   L S M   G+  +    + L++   K  +  EA
Sbjct: 166 SLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEA 225

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             +L+EMLD+ +    VTF  LIDG CK+G V  A++ + +M   G  P++  Y  LI G
Sbjct: 226 NEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYG 285

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LC++  + +AR+L +EM  + + PD   YT LIDG  K    +    L+ RM    + LD
Sbjct: 286 LCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLD 345

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              YT+L+ GL R G   +A  +  EM+  G+ PD      ++ +  + G++  A +L  
Sbjct: 346 EVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLR 405

Query: 245 EMMGRGLLSG 254
           EM   G + G
Sbjct: 406 EMQRNGPVPG 415



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 110/218 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK +++  +L+EM +NGL  N V  TTL+D + K G+
Sbjct: 197 MHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGK 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML       ++T+  LI GLC+ G + +A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E    L   M + ++  D   YTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D   YT ++    + G ++ A  L  EM   G +P
Sbjct: 377 LKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVP 414



 Score =  111 bits (277), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G   +      LM  + K GE   A  + D + 
Sbjct: 116 YFRLVWGF------------YKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  + G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  + +EM    ++P+   +T LIDG+ K+     A+ +  +M   G   DL  Y +L+
Sbjct: 224 EANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL R G L +AR L  EMI +G+ PD+I   +L+    + G+++   EL+  M+
Sbjct: 284 YGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMI 338



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 105/210 (50%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + LM AY ++G   +A+         +I V   T   +++ L K    R    +
Sbjct: 64  SDLYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G  P++  +  L+   CK+  +  A+ +FD + K  + P   ++  L++GY++
Sbjct: 124 YKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIR 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   GV  D+  Y+ L+ GL +   + EA  + +EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +L+  H + G +D A+E+  +M+ +G L
Sbjct: 244 FTTLIDGHCKNGKVDLAMEIYKQMLSQGFL 273



 Score = 75.1 bits (183), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 90/182 (49%)

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           E+L+     ++  F +L+   CK G +R A   F  +  + L P+V  +  L++G  +  
Sbjct: 126 EILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLG 185

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            ++    L   M    + PD   Y+ LI+G  K     EA  + N M + G+  +   +T
Sbjct: 186 DLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFT 245

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +L+ G  + G +  A  ++ +M+ +G LPD I   +L+     RG++ +A +L  EM+ +
Sbjct: 246 TLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMK 305

Query: 250 GL 251
           GL
Sbjct: 306 GL 307



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 49/114 (42%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K D   Y T+I G C E   E +  L   M    +  + V  T L+    + G   +
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGD 364

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
           A  +L EML   ++    T+ ++++  CK+G V+ A      M   G  P V  
Sbjct: 365 AEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 130/285 (45%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I++D+ +Y ++I   C +   + + LL  E+ E GL+ ++     L+D   K GE
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA-------------IDYFG--- 104
              A  L++EM    + +T V F  LIDG C+ G+V EA              D F    
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439

Query: 105 -------------------RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                              RM + G+  +   YT LID  CK+  +E A+ LF EM  + 
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+   Y  +I  Y K    KEA  L+  M   G+D D   YTSL+ G     ++ EA 
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM 559

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            LF EM  +G+  + +    ++    + G  DEA  L +EM  +G
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 112/227 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +     ++ T+I G C +   +++ ++   M++ G  A+   C T+   + +   
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   L  M++  ++++ V++  LID  CK G V EA   F  M   G+ PN   Y  
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   CK+  I+ AR L   M    M PD+  YT+LI G    ++  EA+ L + M   G
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +D +   YT ++ GLS+ G   EA  L+ EM  +G   D  +  +L+
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 128/283 (45%), Gaps = 35/283 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K IK +   Y TII     +  F   + +L  MK++G+  N V  T LM+   K G+ S+
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD 312

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L DEM +  IE  V  +  LI   C+ G ++ A   F  + + GL P+   Y ALID
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH-------------------- 163
           G+CK   +  A  L +EM  + +      +  LIDGY +                     
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432

Query: 164 ---------------ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
                          + + EA     RM E GV L   +YT+L+    + G+++EA+ LF
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM  +G+ P+ I    ++  + ++G + EA +L+  M   G+
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 113/236 (47%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GLC   + E SK L+ E    G+        T+++AY K  + S    +L  M    
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           +    VT+ +L++   K+G + +A   F  M + G+  +V VYT+LI   C+K  ++RA 
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            LFDE+ ++ + P +  Y ALIDG  K      A  L N M   GV++    + +L+ G 
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            R G + EA +++  M  +G   D   C ++          DEA +    MM  G+
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 107/226 (47%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           FE+   +   M + GL+ +   C   + A  K       L +   M+DS +++TV +  +
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +++GLC+ G V ++          G+ P    Y  +I+   K+        +   M K  
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++ +   YT L++  +K+    +A  L + M E G++ D++ YTSL+    R G+++ A 
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +LF E+  +G+ P      +L+    + G M  A  L NEM  +G+
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 22/273 (8%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTV--ICTTLMD--------- 53
           N+K DL    T+   L    +F + + LL+ +  +G     V  + + ++D         
Sbjct: 92  NLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEKFE 151

Query: 54  -----------AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
                       Y   G   E L + D M+   + +   +  V +    K   +   ++ 
Sbjct: 152 FFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEI 211

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           F RM D G+   V   T +++GLC++  +E+++ L  E   + + P+   Y  +I+ Y+K
Sbjct: 212 FRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK 271

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
              F     +   M + GV  +   YT L+    + G + +A  LF EM  RGI  D  +
Sbjct: 272 QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
             SL+  +  +GNM  A  L +E+  +GL   S
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 62/125 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ +   Y  +I+  C + K ++++ L + M+ NG+  ++   T+L+     A  
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN 554

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  EM    ++   VT+ V+I GL K+G   EA   +  M   G   +  VYTA
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTA 614

Query: 121 LIDGL 125
           LI  +
Sbjct: 615 LIGSM 619


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 119/239 (49%), Gaps = 1/239 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y T+I   C +     +      ++E+G+  +T  C  L+  Y +  +  +A  LL
Sbjct: 178 DTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLL 237

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M          ++ +LI GL ++  VREA+     M   G   N+ +YT LI GLCK+
Sbjct: 238 MMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKE 297

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             I  AR L DEMP R ++P    Y A+IDGY K    K+AL +K  M + G + D   Y
Sbjct: 298 GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTY 357

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            SL++GL   G L EA  L +  I RG  P  I   +L+  + +   +D+A+ +++ M+
Sbjct: 358 NSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415



 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 3/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N K DL  YG +I  L  + + +++K  L+EM  NGL  N VI T+++D Y K G 
Sbjct: 414 MISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGM 473

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +   M          T+  LI GL +   + +A+    +M + G+ P V  YT 
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTT 533

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CKK+  + A  LF+ M K  + PD  AY  L D   K    +EA +    +   G
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF---LVRKG 590

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V L    YTSLV G S+ G+   A VL  +M+  G   D      LL+   ++  ++EA+
Sbjct: 591 VVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEAL 650

Query: 241 ELQNEMMGRGL 251
            + ++M   G+
Sbjct: 651 SILDQMTVSGV 661



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 1/208 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I+GLC   K ++++ LL+     G T   +  T L++ Y KA    +AL +   M+
Sbjct: 357 YNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S  ++ +  + VLI+ L K   ++EA +    M   GL PNV +YT++IDG CK   + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVG 475

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F  M      P+   Y +LI G ++ +   +A+ L  +M E G+   + AYT+L+
Sbjct: 476 AALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLI 535

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDE 220
            G  +      A  LF  M   G+ PDE
Sbjct: 536 QGQCKKHEFDNAFRLFEMMEKNGLTPDE 563



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 123/299 (41%), Gaps = 48/299 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTAN---------------- 44
           M+   I   +  Y T+I G C + +F+++  L   M++NGLT +                
Sbjct: 519 MQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGR 578

Query: 45  ----------------TVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
                            V  T+L+D + KAG    A  L+++M++   +  + T+ VL+ 
Sbjct: 579 AEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQ 638

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            LCK   + EA+    +M   G+  N+  YT +I  + K+   + A++LF+EM      P
Sbjct: 639 ALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
             T YT  I  Y K    +EA +L   M   GV  D+  Y   + G    G++  A    
Sbjct: 699 SATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTL 758

Query: 209 HEMIGRGILPD---------EILCISLLKKHY-ERGNMDEAIELQN------EMMGRGL 251
             M+     P+           L +SL+  HY +   M   IEL         MM  GL
Sbjct: 759 KRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGL 817



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 34/277 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL- 67
           +L +Y  +I GLC E +  D++ LL EM   G+  +      ++D Y K+G   +AL + 
Sbjct: 283 NLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIK 342

Query: 68  -----------------------------LDEMLDSRIE----VTVVTFCVLIDGLCKSG 94
                                         +E+L+  I      TV+TF  LI+G CK+ 
Sbjct: 343 ALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAE 402

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + +A+     M       ++  Y  LI+ L KK  ++ A+   +EM    + P+   YT
Sbjct: 403 RIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYT 462

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           ++IDGY K      AL +   M   G   +   Y SL++GL +   L +A  L  +M   
Sbjct: 463 SIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQED 522

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           GI P  I   +L++   ++   D A  L   M   GL
Sbjct: 523 GITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGL 559



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 118/284 (41%), Gaps = 34/284 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++   ++ D      ++ G C  S    +  LL  M   G   N    T L+   ++A  
Sbjct: 205 LRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARC 264

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L+  M+     + +  + +LI GLCK G + +A      MP  G+ P+V  Y A
Sbjct: 265 VREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNA 324

Query: 121 LIDGLCKK----------------NC------------------IERARNLFDEMPKRDM 146
           +IDG CK                  C                  ++ A  L +    R  
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGF 384

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P    +T LI+GY K E   +AL +K+ M      LDL AY  L+  L +   L+EA+ 
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE 444

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +EM   G+ P+ ++  S++  + + G +  A+E+   M   G
Sbjct: 445 TLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEG 488



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 16/223 (7%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K     Y   I   C   + E+++ L+ EM+ +G+T + V     ++     G    A S
Sbjct: 697 KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFS 756

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR-EAIDYFG---------------RMPDFG 110
            L  M+D+  E    T+ +L+    K  L+    ID  G               RM   G
Sbjct: 757 TLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHG 816

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           L+P V  Y+++I G CK   +E A  L D M  + + P+   YT LI      + F + +
Sbjct: 817 LNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDV 876

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           +    M E G    L +Y  L+ GL   G    A+ LF +++G
Sbjct: 877 SFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLG 919



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 84/171 (49%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
            VT+  +I   CK G +  A  YF  + + G+  +     AL+ G C+ + + +A  L  
Sbjct: 179 TVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLM 238

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
            MP      +  +YT LI G  +    +EAL L   M + G  L+L+ YT L+ GL + G
Sbjct: 239 MMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEG 298

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            + +AR L  EM  RG++P      +++  + + G M +A+ ++  M   G
Sbjct: 299 RIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 71/161 (44%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           LL  M ++GL    V  ++++  + KA    EA  LLD ML   I      + +LI   C
Sbjct: 808 LLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCC 867

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
              L  + + +   M +FG  P +  Y  LI GLC +   +RA++LF ++   D   +  
Sbjct: 868 DIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEV 927

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           A+  L DG LK         L   M      +D  +Y+ L 
Sbjct: 928 AWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLT 968



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 63/146 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II G C  ++ E++ +LL  M    ++ N  I T L+          + +S + +M+
Sbjct: 824 YSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMI 883

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +   +  + ++  LI GLC  G    A   F  +     + N   +  L DGL K   ++
Sbjct: 884 EFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVD 943

Query: 133 RARNLFDEMPKRDMIPDTTAYTALID 158
               L   M  R    D+ +Y+ L D
Sbjct: 944 FCSQLLAAMDNRHCRIDSESYSMLTD 969


>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 115/213 (53%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+ E G  A+      LM  + K GE   A S+ D +    +  +VV+F  LI+G  K G
Sbjct: 126 EVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLG 185

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + E       M   G  P+V  Y+ LI+GLCK+  ++ A  LF+EM    ++P+   +T
Sbjct: 186 DLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFT 245

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LI G+ K+E    A+ +  +M   G+  DL  Y +L++GL + G L++   L  EMI  
Sbjct: 246 TLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN 305

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           G+ PD+I   +L+    + G+++ A+EL+N+M+
Sbjct: 306 GLKPDKISYTTLIDGSCKEGDLEIALELRNKMI 338



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 123/242 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G       ++   L S M  +G   +    + L++   K G+  EA  L +EML
Sbjct: 174 FNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEML 233

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D+ +    VTF  LI G CK+  V  A++ + +M   GL P++  Y  LI GLCKK  ++
Sbjct: 234 DNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELK 293

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +  +L DEM    + PD  +YT LIDG  K    + AL L+N+M +  + LD  AYT+L+
Sbjct: 294 QVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALI 353

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L R G   +A  +  EM+  G+ PD      ++ +  ++ +   A +L  EM   G +
Sbjct: 354 SCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPV 413

Query: 253 SG 254
            G
Sbjct: 414 PG 415



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 106/218 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D+  Y  +I GLC E K +++  L +EM +NGL  N V  TTL+  + K  +
Sbjct: 197 MHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEK 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++  D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A  L ++M +  +  D  AYTALI    +     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D   YT ++    +    + A  L  EM   G +P
Sbjct: 377 LKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVP 414



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 106/209 (50%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + LM AY ++G   +A+         +I V   T   +++ L +    +   D+
Sbjct: 64  SDFYVFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK+  +  A+++FD + K  + P   ++  LI+GY+K
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   G   D+  Y+ L+ GL + G L EA  LF+EM+  G++P+ + 
Sbjct: 184 LGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H +   +D A+E+  +M+ +GL
Sbjct: 244 FTTLIHGHCKNEKVDLAMEIYKQMLSQGL 272


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 124/241 (51%)

Query: 9    DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
            D+  + T+I GLC E     ++  L E     L  N +  T L+  +   GE   A  LL
Sbjct: 1117 DIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLL 1176

Query: 69   DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             EM+       VVTF  LI GL  +G V EA+    +M +  + P+V +Y  LI GLCKK
Sbjct: 1177 VEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKK 1236

Query: 129  NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              +  A+N+ +EM ++++ PD   Y  LIDG+++ E+  +A  +   M   GV  D+ + 
Sbjct: 1237 RMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSC 1296

Query: 189  TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             +++ G  + G + EA +    M   G +PDE    +++  + ++GN++ A+    +M+ 
Sbjct: 1297 NAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIK 1356

Query: 249  R 249
            R
Sbjct: 1357 R 1357



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 118/239 (49%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            YG++I  L  +   E    L  EM++ G + N  I  +++DA       ++A+ +L +M 
Sbjct: 1051 YGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMF 1110

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             S  +  ++TF  LI GLC  G VR+A  +        L+PN   YT LI G C +  + 
Sbjct: 1111 ASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELM 1170

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             A +L  EM  R   PD   + ALI G +      EAL ++ +MTE  V  D+N Y  L+
Sbjct: 1171 VASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 1230

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             GL +   L  A+ +  EM+ + + PDE +  +L+       N+ +A ++   M  +G+
Sbjct: 1231 SGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 1289



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 115/239 (48%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y  +I G C+  +   +  LL EM   G T + V    L+     AG+ SEAL + ++M 
Sbjct: 1156 YTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 1215

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + ++   V  + VLI GLCK  ++  A +    M +  + P+  VY  LIDG  +   + 
Sbjct: 1216 ERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 1275

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             AR +F+ M  + + PD  +  A+I GY +     EA+   + M +VG   D   YT+++
Sbjct: 1276 DARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 1335

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             G ++ G+L  A     +MI R   P+ +   SL+  + + G+ D A  L   M    L
Sbjct: 1336 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEAL 1394



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 108/228 (47%)

Query: 23   ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
            + +++D++ L  EM      A+      L+          E L L++    +     VV 
Sbjct: 956  QRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVF 1015

Query: 83   FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
            + VLIDG C+ G +   +   G M   G  P +  Y +LI+ L KK  +E+  +LF EM 
Sbjct: 1016 YNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMR 1075

Query: 143  KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
            KR   P+   Y ++ID      S  +A+ +  +M   G D D+  + +L+ GL   GH++
Sbjct: 1076 KRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 1135

Query: 203  EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +A     E I R + P+++    L+     RG +  A +L  EMMGRG
Sbjct: 1136 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRG 1183



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 112/252 (44%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M GK+  AD      ++ GLC+E + E+   L+      G   + V    L+D Y + G+
Sbjct: 969  MLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGD 1028

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                L LL EM  +    T+VT+  LI+ L K G + +    F  M   G  PNV +Y +
Sbjct: 1029 MGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNS 1088

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +ID LC      +A  +  +M      PD   +  LI G       ++A +         
Sbjct: 1089 VIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 1148

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            ++ +  +YT L+ G    G L  A  L  EM+GRG  PD +   +L+      G + EA+
Sbjct: 1149 LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 1208

Query: 241  ELQNEMMGRGLL 252
             ++ +M  R + 
Sbjct: 1209 IVREKMTERQVF 1220



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 4/233 (1%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M G+    D+  +G +I GL +  K  ++ ++  +M E  +  +  I   L+    K   
Sbjct: 1179 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRM 1238

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               A ++L+EML+  ++     +  LIDG  +S  + +A   F  M   G+ P++    A
Sbjct: 1239 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNA 1298

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +I G C+   +  A      M K   IPD   YT +I GY K  +   AL     M +  
Sbjct: 1299 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 1358

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKK 229
               ++  Y+SL+ G  + G    A  LF  M    + P+     IL  SL KK
Sbjct: 1359 CKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKK 1411



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 17/243 (6%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+ K +  D+     +I G C      ++ L +S M++ G   +    TT++  Y K G 
Sbjct: 1284 MEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 1343

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + AL  L +M+  + +  VVT+  LI+G CK+G    A   F  M    L PNV  YT 
Sbjct: 1344 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTI 1403

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK----------------HE 164
            LI  L KK+ + RA   F+ M      P+      L++G                   H 
Sbjct: 1404 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 1463

Query: 165  SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
                 +  K  + ++G D   +AY ++++ L R   L+EA    + M  +G +P+ I  +
Sbjct: 1464 KDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 1522

Query: 225  SLL 227
            SLL
Sbjct: 1523 SLL 1525



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 100/221 (45%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  + +  D+ +Y  +I GLC +     +K +L EM E  +  +  +  TL+D + ++  
Sbjct: 1214 MTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSEN 1273

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              +A  + + M    +   +V+   +I G C+ G++ EAI     M   G  P+   YT 
Sbjct: 1274 LGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTT 1333

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +I G  K+  +  A     +M KR   P+   Y++LI+GY K      A  L   M    
Sbjct: 1334 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEA 1393

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
            +  ++  YT L+  L +   +  A + F  M+     P+++
Sbjct: 1394 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDV 1434



 Score = 44.3 bits (103), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 1/168 (0%)

Query: 85   VLIDGLCKSGLVREAIDYFGRMPD-FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             L+     +G++ +A +   R+ + +G  P V     L+  L ++   + AR L+DEM  
Sbjct: 912  ALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLG 971

Query: 144  RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
            +D   D  +   L+ G       +E L L       G    +  Y  L+ G  R G +  
Sbjct: 972  KDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGR 1031

Query: 204  ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              +L  EM   G LP  +   SL+    ++G++++   L  EM  RG 
Sbjct: 1032 GLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGF 1079


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 127/250 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K ++  Y  ++ GLC   + ++++ L+ EM    +  +    + L D   + G+    LS
Sbjct: 262 KPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLS 321

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  E L   + +   T  +L++GLCK G V +A      +   GL P  A+Y  LI+G C
Sbjct: 322 LFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYC 381

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +   ++ A ++F++M  R + PD   Y ALI+G  K E   EA +L   M + GVD  + 
Sbjct: 382 QVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVE 441

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + +L+    R G L++   +  +M  +GI  + I   S++K   + G + EA+ + ++M
Sbjct: 442 TFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDM 501

Query: 247 MGRGLLSGSK 256
           + + ++  ++
Sbjct: 502 IHKDVVPNAQ 511



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 121/266 (45%), Gaps = 35/266 (13%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GLC + K   ++ +L  +   GL   T I  TL++ Y +  +   A S+ ++M    
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRH 400

Query: 76  IEVTVVTFCVLIDGLCKSGLVREA----------------------IDYFGR-------- 105
           I    +T+  LI+GLCK  ++ EA                      ID +GR        
Sbjct: 401 IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCF 460

Query: 106 -----MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
                M D G+  NV  + +++   CK   I  A  + D+M  +D++P+   Y ++ID Y
Sbjct: 461 TVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAY 520

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           ++    ++A  L  +M   GV   +  Y  L+ GL +   + EA  L + +  +G+ PD 
Sbjct: 521 IESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDV 580

Query: 221 ILCISLLKKHYERGNMDEAIELQNEM 246
           +   +++     +G+ D A+EL  EM
Sbjct: 581 VSYNTIISACCNKGDTDRALELLQEM 606



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 105/218 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK ++I+ D   Y  +I GLC      +++ L+ EM+++G+  +     TL+DAY +AG+
Sbjct: 396 MKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQ 455

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +  ++L +M D  I+  V++F  ++   CK+G + EA+     M    + PN  VY +
Sbjct: 456 LEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNS 515

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID   +    E+A  L ++M    +      Y  L+ G  K+    EA  L   +T  G
Sbjct: 516 IIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQG 575

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D+ +Y +++      G    A  L  EM    I P
Sbjct: 576 LRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRP 613



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 6/220 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K IK+++  +G+++   C   K  ++  +L +M    +  N  +  +++DAY ++G 
Sbjct: 466 MQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGG 525

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+++M  S +  ++ T+ +L+ GLCK+  + EA +    + + GL P+V  Y  
Sbjct: 526 TEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNT 585

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   C K   +RA  L  EM K D+ P    Y  L+          +   L   M    
Sbjct: 586 IISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKN 645

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           V+      +S ++G +RC +  +   L  EM  +GI  D+
Sbjct: 646 VE-----PSSSIYG-TRCENESKVASLKKEMSEKGIAFDD 679



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 115/276 (41%), Gaps = 35/276 (12%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GL    K  D+  +  EM + G+  N +   T++D + K G+      L D+ML
Sbjct: 198 YNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQML 257

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID--------- 123
               +  VVT+ VL+ GLC++G + E       M  + + P+   Y+ L D         
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSR 317

Query: 124 --------------------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                                     GLCK   + +A  + + +    ++P T  Y  LI
Sbjct: 318 TMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLI 377

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +GY +    + A ++  +M    +  D   Y +L+ GL +   + EA  L  EM   G+ 
Sbjct: 378 NGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVD 437

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           P      +L+  +   G +++   + ++M  +G+ S
Sbjct: 438 PSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKS 473



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 2/215 (0%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR--IEVTVVTFCVLIDGLCKSGLVR 97
           G   +T      + A   AG+  EAL++L  M  S         ++ V+I GL +SG   
Sbjct: 153 GARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGS 212

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +A+  F  M D G+ PN   Y  +IDG  K   +E    L D+M +    P+   Y  L+
Sbjct: 213 DALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLL 272

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G  +     E   L + MT   +  D   Y+ L  GL+R G  +    LF E + +G++
Sbjct: 273 SGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVI 332

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                C  LL    + G + +A ++   ++  GL+
Sbjct: 333 IGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 367



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 2/210 (0%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM- 106
           C  L+++    G  ++  +    ++ +        +   +     +G + EA+    RM 
Sbjct: 126 CNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMG 185

Query: 107 -PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
             +    P+   Y  +I GL +      A  +FDEM  R + P+   Y  +IDG++K   
Sbjct: 186 RSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGD 245

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            +    L+++M + G   ++  Y  L+ GL R G + E R L  EM    +LPD      
Sbjct: 246 LEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSI 305

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           L       G+    + L  E + +G++ G+
Sbjct: 306 LFDGLTRTGDSRTMLSLFGESLKKGVIIGA 335


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 120/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           + GK I  D+  Y ++I GLC+      +  L  EMK  G   +      L+D+    G+
Sbjct: 397 LTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGK 456

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL+LL EM  S     V+T+  LIDG CK+  + EA + F +M   G+  N   Y  
Sbjct: 457 LQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNT 516

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  L D+M    + PD   Y +L+  + K    K+A ++   M   G
Sbjct: 517 LIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+  Y +L+ GL + G ++ A  L   +  +GI         +++  + R    EA+
Sbjct: 577 CEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAV 636

Query: 241 ELQNEMMGRG 250
            L  EM+ + 
Sbjct: 637 RLFREMIEKA 646



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K    D   Y  +I  LC   K +++  LL EM+ +G   N +   TL+D + K   
Sbjct: 432 MKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKR 491

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + D+M    +    VT+  LIDGLCKS  V EA     +M   GL P+   Y +
Sbjct: 492 IAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNS 551

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   CK   I++A ++   M      PD   Y  LI G  K    + A  L   +   G
Sbjct: 552 LLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKG 611

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEA 239
           ++L  +AY  ++  L R    +EA  LF EMI +   PD +    + +   + G  + EA
Sbjct: 612 INLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEA 671

Query: 240 IELQNEMMGRGLL 252
           ++   EM+ RG +
Sbjct: 672 VDFVMEMLERGYV 684



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 117/242 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I GLC   + +++  +L++M E   + NTV   T++    K  +  EA  L 
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    I   V T+  LI GLC S     A++ +  M   G HP+   Y  LID LC +
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A NL  EM       +   Y  LIDG+ K++   EA  + ++M   GV  +   Y
Sbjct: 455 GKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTY 514

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ GL +   ++EA  L  +MI  G+ PD+    SLL    + G++ +A ++   M  
Sbjct: 515 NTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMAS 574

Query: 249 RG 250
            G
Sbjct: 575 DG 576



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 36/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D+  +  +I  LC   +   + LL+ EM++ GL  +    TT+M  + + G 
Sbjct: 186 MVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGN 245

Query: 61  PSEALSLLDEMLDS--------------------RIEVTV----------------VTFC 84
              A+ + ++M+++                    RIE  +                 TF 
Sbjct: 246 LDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFN 305

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +L++GL K+G V+ A++    M   G  P++  Y +LI GLCK   ++ A  + ++M +R
Sbjct: 306 MLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER 365

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           D  P+T  Y  +I    K    +EA  L   +T  G+  D+  Y SL+ GL    +   A
Sbjct: 366 DCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVA 425

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             L+ EM  +G  PDE     L+     RG + EA+ L  EM   G
Sbjct: 426 MELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSG 471



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 111/239 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII  LC E++ E++  L   +   G+  +     +L+     +   + A+ L  EM 
Sbjct: 374 YNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMK 433

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                    T+ +LID LC  G ++EA++    M   G   NV  Y  LIDG CK   I 
Sbjct: 434 TKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIA 493

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +FD+M  + +  ++  Y  LIDG  K E  +EA  L ++M   G+  D   Y SL+
Sbjct: 494 EAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLL 553

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               + G +++A  +   M   G  PD +   +L+    + G ++ A +L   +  +G+
Sbjct: 554 TYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGI 612



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 105/238 (44%), Gaps = 1/238 (0%)

Query: 19  GLCIESKFEDSKLLLSEMK-ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIE 77
           G C E + E++   + EM    G   +      L++   K G    AL ++D ML    +
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333

Query: 78  VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNL 137
             + T+  LI GLCK G V EA+    +M +    PN   Y  +I  LCK+N +E A  L
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSR 197
              +  + ++PD   Y +LI G     +   A+ L   M   G   D   Y  L+  L  
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453

Query: 198 CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            G LQEA  L  EM   G   + I   +L+    +   + EA E+ ++M  +G+   S
Sbjct: 454 RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNS 511



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 108/239 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++ GL      + +  ++  M   G   +     +L+    K GE  EA+ +L++M+
Sbjct: 304 FNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMI 363

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +       VT+  +I  LCK   V EA      +   G+ P+V  Y +LI GLC      
Sbjct: 364 ERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHT 423

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L+ EM  +   PD   Y  LID        +EALNL   M   G   ++  Y +L+
Sbjct: 424 VAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLI 483

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   + EA  +F +M  +G+  + +   +L+    +   ++EA +L ++M+  GL
Sbjct: 484 DGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGL 542



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 104/251 (41%), Gaps = 36/251 (14%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           E G+ ANT     L++      +          M+   I   V TF +LI  LC++  +R
Sbjct: 153 EFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIR 212

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGL-------------------------------- 125
            AI     M DFGL P+   +T ++ G                                 
Sbjct: 213 PAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLV 272

Query: 126 ---CKKNCIERARNLFDEMPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
              CK+  IE A    +EM  R+   PD   +  L++G  K    K AL + + M   G 
Sbjct: 273 NGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGF 332

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           D D+  Y SL+ GL + G + EA  + ++MI R   P+ +   +++    +   ++EA +
Sbjct: 333 DPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATK 392

Query: 242 LQNEMMGRGLL 252
           L   + G+G+L
Sbjct: 393 LALVLTGKGIL 403



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 3/171 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D+  YGT+I GLC   + E +  LL  ++  G+         ++ A F+   
Sbjct: 572 MASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKR 631

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG-LVREAIDYFGRMPDFGLHPNVAVYT 119
             EA+ L  EM++       VT+ ++  GLC+ G  + EA+D+   M + G  P  + + 
Sbjct: 632 SKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFY 691

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
            L +GL     +     L D + ++    D      +I G+LK   +++AL
Sbjct: 692 MLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEV--TMIRGFLKISKYQDAL 740



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 7/217 (3%)

Query: 37  KENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV---TFCVLIDGLCKS 93
           K+     ++ I   ++    KAGE      +L EM   +I ++V+   +  V I+     
Sbjct: 81  KQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEM---KISLSVIDNDSLLVFIESYASF 137

Query: 94  GLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           GL  E + +   M  +FG+  N   Y  L++ L   N ++        M  R + PD + 
Sbjct: 138 GLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVST 197

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           +  LI    +    + A+ L   M + G+  D   +T+++ G    G+L  A  +  +M+
Sbjct: 198 FNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMV 257

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
             G +   +    L+    + G ++EA+    EM  R
Sbjct: 258 EAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLR 294



 Score = 40.8 bits (94), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 11/158 (6%)

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
            + P+F   P+ +++  ++  L K    +  +++  EM     + D  +    I+ Y   
Sbjct: 80  SKQPNF--KPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASF 137

Query: 164 ESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD--- 219
             + E L   + M  E GV  + + Y  L+  L     L+   +    M+ RGI PD   
Sbjct: 138 GLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVST 197

Query: 220 -EILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
             IL  +L + H  R     AI L  EM   GLL   K
Sbjct: 198 FNILIKALCRAHQIR----PAILLMEEMEDFGLLPDEK 231


>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 418

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E  E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGF------------YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM  + ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EMI +G+ PD+    +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 110/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+ +L  EM + GL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G  P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVV 417



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 116/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD  +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKF 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G+ P+      ++ +  ++G++    +L  EM   G
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 105/211 (49%)

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           L ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +   
Sbjct: 62  LRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVW 121

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
            ++    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY
Sbjct: 122 GFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 181

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +K     E   LKN M   GV  D+  Y+ L+ GL +   + +A VLF EM+ +G++P+ 
Sbjct: 182 IKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNG 241

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   +L+  H + G +D A+E+  +M+ + L
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 110/247 (44%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
            +++D+ ++  +I          D+       KE+        C  +++   K       
Sbjct: 61  TLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLV 120

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
               +E L+     ++  F +L+    K G +R A   F  +  +GL P+V  +  L++G
Sbjct: 121 WGFYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG 180

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             K   +     L + M    + PD   Y+ LI+G  K     +A  L + M + G+  +
Sbjct: 181 YIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPN 240

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              +T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLID 300

Query: 245 EMMGRGL 251
           EM+ +GL
Sbjct: 301 EMIMKGL 307



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI+ D   Y  +I GLC E +  D++ +L EM   GL       T +++ + K G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 61  PSEALSLLDEMLDSRIEVTVVT 82
                 LL EM     + +VVT
Sbjct: 397 VWTGSKLLKEMQRDGYKPSVVT 418


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 114/239 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GL  + +FE +K L+ EM + GL  +      L+  YF  G  +EALSL +EM+
Sbjct: 578 YNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMV 637

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 TV T+   I GLCK G + +A+     M    L P+V  Y  LI G C+   + 
Sbjct: 638 LKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLM 697

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  LFDE+    + P    Y  L+DG  +    + A  LK  M   G+  D+  YT LV
Sbjct: 698 KAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILV 757

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G L  A+  F EM+  G+  D     + +    + G+   A  LQ EM+ +G 
Sbjct: 758 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 816



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 120/246 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK  +  Y T++   C   K +    LLSEM+  G   N V    L++   K GE  +A 
Sbjct: 536 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 595

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L+ EML + ++V+  T+  LI G    GL+ EA+     M   G  P VA Y + I GL
Sbjct: 596 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGL 655

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +  A     +M   +++PD  +Y  LI GY +  +  +A  L + +  + +   +
Sbjct: 656 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTI 715

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL R G L+ A+ L  EMI  GI PD +    L+    + G++  A E  +E
Sbjct: 716 VTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDE 775

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 776 MLHEGL 781



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 101/207 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K     +  Y + I+GLC   +  D+   LS+M  N L  + V   TL+  Y + G   +
Sbjct: 639 KGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMK 698

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L DE+    +  T+VT+  L+DGLC+ G +  A      M + G+ P++  YT L++
Sbjct: 699 AFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVN 758

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G CK   +  A+  FDEM    +  D+ AY   I G LK      A +L+  M   G   
Sbjct: 759 GSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPP 818

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHE 210
           DL  Y  +V GL + G+L+EA  L  +
Sbjct: 819 DLIIYNVVVDGLCKLGNLEEASELLQK 845



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 109/231 (47%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +IW    +S  E    +  +M ++ L+ +   C  ++         S+A+ +   M +  
Sbjct: 476 LIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFG 535

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           I+ T+VT+  L+D  CK G V++ +D    M   G  PN   Y  LI+GL KK   E+A+
Sbjct: 536 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 595

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            L  EM K  +      Y  LI GY       EAL+L+  M   G    +  Y S ++GL
Sbjct: 596 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGL 655

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + G + +A     +M+   +LPD +   +L+  +   GN+ +A  L +E+
Sbjct: 656 CKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 706



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           I   L+  Y K     + LS+ D+M+ SR+   V     ++  L    L+ +A++ +  M
Sbjct: 472 ILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTM 531

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            +FG+ P +  Y  L+D  CK   +++  +L  EM +R   P+   Y  LI+G  K   F
Sbjct: 532 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEF 591

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           ++A  L   M + G+ +    Y  L++G    G L EA  L  EM+ +G  P      S 
Sbjct: 592 EQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSF 651

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLL 252
           +    + G M +A++  ++M+   LL
Sbjct: 652 IYGLCKLGRMSDAMQQLSDMLANNLL 677



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 80/172 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  D+  Y T+I+G C       + LL  E++   L    V   TL+D   + GE
Sbjct: 671 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGE 730

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EM++  I   +VT+ +L++G CK G +  A ++F  M   GL  +   Y  
Sbjct: 731 LEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYAT 790

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
            I G  K     RA +L +EM  +   PD   Y  ++DG  K  + +EA  L
Sbjct: 791 RIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASEL 842



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 83/174 (47%)

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
           EV+V    +LI    K  +V + +  F +M    L P+V     ++  L  K+ + +A  
Sbjct: 467 EVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVE 526

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           ++  M +  + P    Y  L+D Y K    ++ L+L + M   G   +   Y  L+ GLS
Sbjct: 527 VYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLS 586

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + G  ++A+ L  EM+  G+         L+  ++ +G + EA+ LQ EM+ +G
Sbjct: 587 KKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKG 640


>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 418

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E  E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 116 YFKLVWGF------------YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM  + ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EMI +G+ PD+    +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 110/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D+ +L  EM + GL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G  P  +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVV 417



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 116/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M+ +G+  +    + L++   K  +  +A  L DEMLD  +    VTF  LIDG C
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKF 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G+ P+      ++ +  ++G++    +L  EM   G
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDG 411



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 104/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+    K+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A VLF EM+ +G++P+ + 
Sbjct: 184 LGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 99/215 (46%)

Query: 37  KENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV 96
           KE+        C  +++   K           +E L+     ++  F +L+    K G +
Sbjct: 93  KEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSFVKEGEI 152

Query: 97  REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
           R A   F  +  +GL P+V  +  L++G  K   +     L + M    + PD   Y+ L
Sbjct: 153 RLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVL 212

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           I+G  K     +A  L + M + G+  +   +T+L+ G  + G +  A  ++ +M+ + +
Sbjct: 213 INGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL 272

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            PD I   +L+    ++G++ +A +L +EM+ +GL
Sbjct: 273 SPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGL 307



 Score = 37.7 bits (86), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +NI+ D   Y  +I GLC E +  D++ +L EM   GL       T +++ + K G+
Sbjct: 337 MIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGD 396

Query: 61  PSEALSLLDEMLDSRIEVTVVT 82
                 LL EM     + +VVT
Sbjct: 397 VWXGSKLLKEMQRDGYKPSVVT 418


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 111/214 (51%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           E G   + + C  L++   K     +   +  EM    I     TF +L    C+ G V 
Sbjct: 207 EVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVD 266

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +  D+  RM + G  P++  Y  LI   C+K  ++ A  L+  M +R+++PD  +YTAL+
Sbjct: 267 KVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALM 326

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +G  K    +EA  L +RM   G++ D+ ++ +L+ G  + G ++E+R L HEMIG GI 
Sbjct: 327 NGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGIC 386

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           PD++ C  L++ + +   +  A+ L  E+   G+
Sbjct: 387 PDKVTCQVLIEGYRKEARIVSALNLVVELERFGV 420



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 116/239 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +N+  DL  Y  ++ GLC E K  ++  L   M   GL  + V   TL+  Y K G+
Sbjct: 310 MYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGK 369

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+ SLL EM+ S I    VT  VLI+G  K   +  A++    +  FG+  +  +Y  
Sbjct: 370 MRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDY 429

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+  +C++     A++L   + +R  +P    Y  LI+   K +S  +AL +K+ M    
Sbjct: 430 LMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRN 489

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           +      Y +L+  L R     EA  L  EM+  G+LPD  +C +L+  + +  ++ +A
Sbjct: 490 IKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKA 548



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 105/220 (47%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
            L  M+E G   + V   TL+  Y + G   +A  L   M    +   +V++  L++GLC
Sbjct: 271 FLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLC 330

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G VREA   F RM   GL+P++  +  LI G CK+  +  +R+L  EM    + PD  
Sbjct: 331 KEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKV 390

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
               LI+GY K      ALNL   +   GV +  + Y  L+  +   G    A+ L   +
Sbjct: 391 TCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRI 450

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             RG +P   +   L++   +  ++ +A+ +++EM  R +
Sbjct: 451 SQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNI 490



 Score = 97.4 bits (241), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 101/208 (48%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF 103
           + VI   L+ AY + G   E  +   ++++     +V++   L++GL K   + +    +
Sbjct: 178 DPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVY 237

Query: 104 GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
             M   G+HPN   +  L    C+   +++  +  + M +    PD   Y  LI  Y + 
Sbjct: 238 KEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRK 297

Query: 164 ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
               +A  L   M    V  DL +YT+L+ GL + G ++EA  LFH MI RG+ PD +  
Sbjct: 298 GRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSF 357

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +L+  + + G M E+  L +EM+G G+
Sbjct: 358 NTLICGYCKEGKMRESRSLLHEMIGSGI 385



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 92/197 (46%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  ++  +C E +   +K LL  + + G      I   L+++  K+   ++AL +  EM
Sbjct: 426 IYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEM 485

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               I+ + +T+  LI  LC++    EA      M   G+ P+  +  AL+   CK+  I
Sbjct: 486 GHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDI 545

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            +A  L     K   I D+ +Y  L+  Y +       + L++RM +VG   ++  +  +
Sbjct: 546 GKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQM 605

Query: 192 VWGLSRCGHLQEARVLF 208
           + GL +   +++ ++L 
Sbjct: 606 IHGLWKAMAVEKDKLLL 622



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 35/227 (15%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  + T+I G C E K  +S+ LL EM  +G+  + V C  L++ Y K   
Sbjct: 345 MIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEAR 404

Query: 61  PSEALSLLDEMLDSRIEVT-------VVTFC----------------------------V 85
              AL+L+ E+    + ++       +V+ C                             
Sbjct: 405 IVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNK 464

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+ LCKS  + +A+     M    + P+   Y ALI  LC+ +    A +L +EM +  
Sbjct: 465 LIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSG 524

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           M+PD     AL+  Y K     +A  L     +     D  +Y +LV
Sbjct: 525 MLPDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLV 571


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 129/284 (45%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I   +  + ++I+G C + K  ++  LL  +K +GL   +V  TTLM+ Y + G+   
Sbjct: 536 KGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHS 595

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              +L EM    I+ T +T+ V++ GLCK G + E++     M   GL P+   Y  +I 
Sbjct: 596 MFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQ 655

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
             CK + +++A  L ++M +  + P    Y  LI+G   + + K+A  L   + +  + L
Sbjct: 656 SFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRL 715

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGR----------------------------- 214
              AYT+++      G +Q A V FH+M+ R                             
Sbjct: 716 TKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFF 775

Query: 215 ------GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                 GI PD+ +C+ +L   +  G+ +   E+   M+  GLL
Sbjct: 776 CMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLL 819



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 127/278 (45%), Gaps = 27/278 (9%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTA----------------- 43
           M  + +K  +  Y  ++  LC   + +++ +LL EM+  GL                   
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELY 460

Query: 44  ----------NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS 93
                     N+ +C+ ++   F+ G  SEA    D +  S +   ++ + ++IDG  K 
Sbjct: 461 EEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKL 520

Query: 94  GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
           G + EA+  + ++ + G+ P +  + +LI G CKK  +  A  L D +    ++P +  Y
Sbjct: 521 GNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTY 580

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
           T L++GY +        ++ + M    +      YT +V GL + G L E+  L   M  
Sbjct: 581 TTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYA 640

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           RG+ PD+I   ++++   +  ++ +A +L N+M+   L
Sbjct: 641 RGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSL 678



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 8/240 (3%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I GLC +S+ +D+   L E        + V    LM  + K G    A S    M+   
Sbjct: 241 LIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYG 300

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           +   V ++ +L+ GLC +G + EA+++   M + G+ P++  Y  L +G      I  A 
Sbjct: 301 LLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAW 360

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            +   M    + PD   YT LI G+ +  + +E+  LK +M   G+ L +  YT L+  L
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            + G + EA +L HEM   G+ PD +         Y RG ++EAIEL  EM  + +   S
Sbjct: 421 CKSGRIDEAVILLHEMEVIGLKPDLLT--------YSRGAVEEAIELYEEMCSKRIYPNS 472



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 27/278 (9%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +  G  I      +  ++  M  NGL  + V  T L+  + + G 
Sbjct: 331 MENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGN 390

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI------DYFGRMPDF----- 109
             E+  L ++ML   +++++VT+ VL+  LCKSG + EA+      +  G  PD      
Sbjct: 391 IEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR 450

Query: 110 ----------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
                            ++PN  V +A+I GL +K  I  A+  FD + K D+  +   Y
Sbjct: 451 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILY 510

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
             +IDGY K  +  EA+    ++ E G+   +  + SL++G  + G L EA  L   +  
Sbjct: 511 NIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKV 570

Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G++P  +   +L+  + E G+M    ++ +EM  + +
Sbjct: 571 HGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAI 608



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 115/247 (46%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++  ++ LY  +I G        ++     ++ E G++   V   +L+  + K G+ +EA
Sbjct: 502 DVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEA 561

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + LLD +    +  T VT+  L++G C+ G +    D    M    + P    YT ++ G
Sbjct: 562 VKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKG 621

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK+  +  +  L   M  R + PD   Y  +I  + K    ++A  L N+M +  +   
Sbjct: 622 LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPS 681

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y  L+ GL   G+L++A  L   +  + I   ++   +++K H  +G++  A+   +
Sbjct: 682 PVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFH 741

Query: 245 EMMGRGL 251
           +M+ RG 
Sbjct: 742 QMVERGF 748



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 8/237 (3%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G+     +  +  ++ G C     + +K     M + GL  +      L+     AG   
Sbjct: 263 GEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSME 322

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EAL   ++M +  +E  +VT+ +L +G    GL+  A     RM   GL+P++  YT LI
Sbjct: 323 EALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILI 382

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G C+   IE +  L ++M  + +      YT L+    K     EA+ L + M  +G+ 
Sbjct: 383 CGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLK 442

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            DL  Y+         G ++EA  L+ EM  + I P+  +C +++   +E+G + EA
Sbjct: 443 PDLLTYSR--------GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA 491


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 132/281 (46%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG------ 59
           +  D+  Y T+I GLC  S   +++  L ++   GL  +     TL+D Y K G      
Sbjct: 282 LTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAE 341

Query: 60  -----------------------------EPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
                                        E   AL+L +  L   ++ TV+ + +LI GL
Sbjct: 342 KILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGL 401

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           C+ GL+ +A+     M + G   ++  Y  +I+GLCK  C+  A NL ++   +  +PD 
Sbjct: 402 CQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDV 461

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             +  LIDGY K    +  + + N+M   GV  D+  Y S++ GLS+    ++    F  
Sbjct: 462 FTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFET 521

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M+ +G +P++I    L +   + G ++EA++L +E++ +G+
Sbjct: 522 MVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGI 562



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  D+  +   I   C   +   +  LL+ M   G   N V   T++  +++   
Sbjct: 137 MKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENY 196

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L ++ML   I   V TF  L+  LCK G V+E+     ++   G+  N+  +  
Sbjct: 197 RVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNI 256

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I GLC+K  +  A ++ D + +  + PD   Y  LI G  K+ +  EA    +++   G
Sbjct: 257 FIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGG 316

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y +L+ G  + G LQ A  +    I +G +PDE    SL+    +   +D A+
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRAL 376

Query: 241 ELQNEMMGRGL 251
            L N  +G+GL
Sbjct: 377 ALFNAALGKGL 387



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/281 (24%), Positives = 129/281 (45%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+  +  ++  LC + + ++S+ LL+++ + G+ +N       +    + G  S A+
Sbjct: 212 IFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAM 271

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S+LD ++   +   VVT+  LI GLCK+  V EA  Y  ++ + GL P+   Y  LIDG 
Sbjct: 272 SMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGY 331

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK------------------ 167
           CK   ++ A  +      +  +PD   Y +LI+G  +++                     
Sbjct: 332 CKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTV 391

Query: 168 -----------------EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
                            +AL + N M+E G   D+  Y  ++ GL + G + +A  L ++
Sbjct: 392 ILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMND 451

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            I +G +PD     +L+  + ++  M+  I++ N+M   G+
Sbjct: 452 AIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGV 492



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 113/241 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G   E+   ++  L ++M   G+  +      L+    K GE  E+  LL+++L
Sbjct: 184 YCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVL 243

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   + TF + I GLC+ G++  A+     +   GL P+V  Y  LI GLCK + + 
Sbjct: 244 KKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVV 303

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A     ++    + PD   Y  LIDGY K    + A  +       G   D   Y SL+
Sbjct: 304 EAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLI 363

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL +   +  A  LF+  +G+G+ P  IL   L+K   + G + +A+++ NEM   G  
Sbjct: 364 NGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCS 423

Query: 253 S 253
           S
Sbjct: 424 S 424



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 102/209 (48%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK +K  + LY  +I GLC E     +  +++EM ENG +++      +++   K G  S
Sbjct: 384 GKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVS 443

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A +L+++ +       V TF  LIDG CK   +   I    +M   G+ P+V  Y +++
Sbjct: 444 DANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVL 503

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +GL K    E     F+ M ++  +P+   Y  L +   K     EAL+L + +   G+ 
Sbjct: 504 NGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGIT 563

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            D  ++ +++ G +  G L+ A  LF  M
Sbjct: 564 PDTVSFATIISGFANNGDLKGAYQLFRRM 592



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/240 (21%), Positives = 111/240 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+  L     F+ +  +   MK  G+  +    T  + ++ +   P  AL LL+ M+
Sbjct: 114 YNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMV 173

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               ++  V +C ++ G  +     EA + F  M   G+ P+V+ +  L+  LCKK  ++
Sbjct: 174 SQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQ 233

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            +  L +++ K+ M  +   +   I G  +      A+++ + +   G+  D+  Y +L+
Sbjct: 234 ESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLI 293

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL +  ++ EA    H+++  G+ PD     +L+  + + G +  A ++    + +G +
Sbjct: 294 CGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFV 353



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 109/234 (46%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y ++I GLC   + + +  L +     GL    ++   L+    + G   +AL +++EM 
Sbjct: 359 YCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMS 418

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++     + T+ ++I+GLCK G V +A +        G  P+V  +  LIDG CK+  +E
Sbjct: 419 ENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKME 478

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               + ++M    + PD   Y ++++G  K    ++ +     M E G   +   Y  L 
Sbjct: 479 TTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILT 538

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             L + G + EA  L  E++ +GI PD +   +++      G++  A +L   M
Sbjct: 539 ESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 1/246 (0%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           +D+  Y  +I GLC      D+  L+++    G   +     TL+D Y K  +    + +
Sbjct: 424 SDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQI 483

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L++M    +   V+T+  +++GL K+    + ++ F  M + G  PN   Y  L + LCK
Sbjct: 484 LNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCK 543

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE-VGVDLDLN 186
              +  A +L DE+  + + PDT ++  +I G+  +   K A  L  RM E   V     
Sbjct: 544 AGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTA 603

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y  ++   +    L     LF EM   G  PD      ++      GN D   +   EM
Sbjct: 604 TYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEM 663

Query: 247 MGRGLL 252
           + +G +
Sbjct: 664 IEKGFI 669



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 82/162 (50%)

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G V+EA+D F RM  +   P+V  Y A+++ L +    ++A  +F  M    ++PD  
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVY 147

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +T  I  + + +    AL L N M   G  L+  AY ++V G     +  EA  LF++M
Sbjct: 148 TFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDM 207

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           +  GI PD      LL    ++G + E+  L N+++ +G+ S
Sbjct: 208 LRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCS 249



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 115/249 (46%), Gaps = 5/249 (2%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMK---ENGLTANTVICTTLMDAYFKAGEPS 62
            K  L  Y  II  L     F   + +L+E +   +N L     I    M +Y + G+  
Sbjct: 36  FKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIGA--MKSYGRKGKVQ 93

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA+ + + M     E +V+++  +++ L +SG  ++A   F RM + G+ P+V  +T  I
Sbjct: 94  EAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRI 153

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
              C+      A  L + M  +    +  AY  ++ G+ +     EA  L N M  +G+ 
Sbjct: 154 KSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIF 213

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D++ +  L+  L + G +QE+  L ++++ +G+  +       ++    +G +  A+ +
Sbjct: 214 PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSM 273

Query: 243 QNEMMGRGL 251
            + ++  GL
Sbjct: 274 LDSVIREGL 282



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 82/217 (37%), Gaps = 36/217 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y +++ GL    K ED       M E G   N +    L ++  KAG+
Sbjct: 487 MWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGK 546

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF----------- 109
            +EAL L+DE+L+  I    V+F  +I G   +G ++ A   F RM +            
Sbjct: 547 VNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYN 606

Query: 110 -------------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
                                    G  P+   Y  +IDG C     +       EM ++
Sbjct: 607 IMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEK 666

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
             IP  T +  +I+         EA+++ + M   G+
Sbjct: 667 GFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGI 703



 Score = 40.0 bits (92), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM   G   +T     ++D +   G        L EM++     ++ TF  +I+ LC
Sbjct: 624 LFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLC 683

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
               V EA+D    M   G+ P V    +  D    K  +   + + +++ KR  I    
Sbjct: 684 VQHRVHEAVDIIHFMVHNGIVPEVVNSISEAD----KKVVAAPKIVVEDLLKRSCIT-YY 738

Query: 152 AYTALIDGYLKHESFKEAL 170
           AY  L DG    ++ K+ L
Sbjct: 739 AYELLYDGIRDKKTQKQKL 757


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 122/245 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+    +++ G C + K +  + +   M   GL  +    +  ++ Y K  +  EA+ L 
Sbjct: 144 DVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELF 203

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           DEM    +    VT+  LI  LC++   R+A   F +M   GL P++  Y+ L+DG CK+
Sbjct: 204 DEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQ 263

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++    LF EM +R + PD   YT +I+G  +    K+A  + +R+   G+  D++ Y
Sbjct: 264 GNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTY 323

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+LV GL R G + EA  LF +M   G +P       LL+   +  +    ++L +EM  
Sbjct: 324 TALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMAD 383

Query: 249 RGLLS 253
           RG  +
Sbjct: 384 RGFYA 388



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 122/252 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +  K D+ ++ T+I G+C   K E +  LL EM   G   + V C +LM  Y   G+  +
Sbjct: 104 RGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDK 163

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              +   M+   ++  V ++ + I+G CK   + EA++ F  M   G+ PN   Y  LI 
Sbjct: 164 VRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIK 223

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LC+      A+ LF +M    + PD  AY+ L+DG+ K  +  E L L   M    V  
Sbjct: 224 ALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKP 283

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           DL  YT ++ G+ R   +++A+ +   +I  G+ PD     +L+      G++ EA+ L 
Sbjct: 284 DLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLF 343

Query: 244 NEMMGRGLLSGS 255
            +M   G + GS
Sbjct: 344 RKMEEDGCMPGS 355



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 111/241 (46%), Gaps = 2/241 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K D+  Y   I G C   K +++  L  EM   G+  N V   TL+ A  +A  
Sbjct: 171 MVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALR 230

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P +A  L  +M    +   ++ +  L+DG CK G + E +  F  M    + P++ VYT 
Sbjct: 231 PRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTI 290

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G+C+   ++ A+ +   +    + PD   YTAL+DG  +  S  EAL L  +M E G
Sbjct: 291 IINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDG 350

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
                 +Y  L+ G  +         L HEM  RG   D +    L  K +  GN   AI
Sbjct: 351 CMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFL--KDFLPGNDSPAI 408

Query: 241 E 241
           +
Sbjct: 409 K 409



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 108/225 (48%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K+E    L  EM+  G+  N    + L++ +          S+  + L    +  VV F 
Sbjct: 55  KYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFT 114

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            LIDG+C+ G    A      M   G  P+V    +L+ G C +  I++ R +F  M  +
Sbjct: 115 TLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSK 174

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD  +Y+  I+GY K E   EA+ L + M+  GV  +   Y +L+  L +    ++A
Sbjct: 175 GLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDA 234

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +VLF +M   G+ PD +   +LL    ++GN+DE + L  EM  R
Sbjct: 235 QVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRR 279



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 2/202 (0%)

Query: 54  AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHP 113
            YF  G   +AL+  + MLD   +  ++ F  L+  + +       +  F  M   G+  
Sbjct: 16  GYF--GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKY 73

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           NV   + LI+  C  + ++   ++F +  KR   PD   +T LIDG  +    + A  L 
Sbjct: 74  NVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLL 133

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
             M  VG   D+    SL+ G    G + + R +FH M+ +G+ PD       +  + + 
Sbjct: 134 KEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKV 193

Query: 234 GNMDEAIELQNEMMGRGLLSGS 255
             +DEA+EL +EM  RG++  +
Sbjct: 194 EKIDEAMELFDEMSHRGVVPNA 215


>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
          Length = 977

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 125/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K D   Y T++  L    +F     LL EM  +G   NTV    L+ +Y +A   +EA+
Sbjct: 477 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 536

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           ++ ++M ++  +   VT+C LID   K+G +  A+D + RM   GL P+   Y+ +I+ L
Sbjct: 537 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 596

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +  A  LF EM  +   P+   Y  ++D + K  +++ AL L   M   G + D 
Sbjct: 597 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 656

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+ ++  L  CG+L+EA  +F EM  +  +PDE +   L+    + GN+++A +    
Sbjct: 657 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 716

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 717 MLHAGL 722



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 2/220 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAG 59
           M+    K D   Y T+I  +  ++ F D  + +   M+  GL+ +T   + +++   KAG
Sbjct: 542 MQEAGCKPDRVTYCTLI-DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 600

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
               A  L  EM+D      +VT+ +++D   K+   + A+  +  M + G  P+   Y+
Sbjct: 601 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYS 660

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +++ L     +E A  +F EM +++ IPD   Y  L+D + K  + ++A      M   
Sbjct: 661 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 720

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           G+  ++    SL+    R   + EA  L   M+  G+ P 
Sbjct: 721 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 760



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 80/192 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D   Y  II  L        +  L  EM + G T N V    +MD + KA  
Sbjct: 577 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 636

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L  +M ++  E   VT+ ++++ L   G + EA   F  M      P+  VY  
Sbjct: 637 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 696

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D   K   +E+A   +  M    + P+     +L+  +L+     EA  L   M  +G
Sbjct: 697 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 756

Query: 181 VDLDLNAYTSLV 192
           +   L  YT L+
Sbjct: 757 LRPSLQTYTLLL 768


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I+ DL  Y T+I G            L S+    G+  + V+ ++ +D Y K+G+
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  +   ML   I   VVT+ +LI GLC+ G + EA   +G++   G+ P++  Y++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +     L+++M K    PD   Y  L+DG  K      A+    +M    
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L++  + SL+ G  R     EA  +F  M   GI PD     ++++     G ++EA+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551

Query: 241 ELQNEMMGRGL 251
            L   M   GL
Sbjct: 552 FLFFRMFKMGL 562



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 115/230 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C   + + +  L   M++ G+  + +  +TL+D YFKAG       L  + L
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +++ VV F   ID   KSG +  A   + RM   G+ PNV  YT LI GLC+   I 
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  ++ ++ KR M P    Y++LIDG+ K  + +    L   M ++G   D+  Y  LV
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            GLS+ G +  A     +M+G+ I  + ++  SL+         DEA+++
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 114/246 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D   Y T+I   C   K      L   M+ N ++A+  +C  ++   FK     +A 
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              + +++ ++E  +VT+  +I G C    + EA   F  +      PN    T LI  L
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N ++ A  +F  M ++   P+   Y  L+D + K    + +  L   M E G+   +
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 741

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
            +Y+ ++ GL + G + EA  +FH+ I   +LPD +    L++ + + G + EA  L   
Sbjct: 742 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH 801

Query: 246 MMGRGL 251
           M+  G+
Sbjct: 802 MLRNGV 807



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 3/252 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K D+ ++ + I           + ++   M   G++ N V  T L+    + G   E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +  ++L   +E ++VT+  LIDG CK G +R     +  M   G  P+V +Y  L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K+  +  A     +M  + +  +   + +LIDG+ +   F EAL +   M   G+  
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  +T+++      G L+EA  LF  M   G+ PD +   +L+    +  +M   I LQ
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK--HMKPTIGLQ 587

Query: 244 -NEMMGRGLLSG 254
             ++M R  +S 
Sbjct: 588 LFDLMQRNKISA 599



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 117/247 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I AD+ +   +I  L    + ED+    + + E  +  + V   T++  Y     
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + + +  +      VT  +LI  LCK+  +  AI  F  M + G  PN   Y  
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D   K   IE +  LF+EM ++ + P   +Y+ +IDG  K     EA N+ ++  +  
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ AY  L+ G  + G L EA +L+  M+  G+ PD++L  +L + +  +  M + +
Sbjct: 772 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGV 831

Query: 241 ELQNEMM 247
            + ++ M
Sbjct: 832 WVHDKPM 838



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 116/236 (49%), Gaps = 1/236 (0%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GL ++ + E +  LLS + + G   N V   TL++ + K GE   A  L   M    
Sbjct: 258 VLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           IE  ++ +  LIDG  K+G++      F +    G+  +V V+++ ID   K   +  A 
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            ++  M  + + P+   YT LI G  +     EA  +  ++ + G++  +  Y+SL+ G 
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +CG+L+    L+ +MI  G  PD ++   L+    ++G M  A+    +M+G+ +
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 106/236 (44%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++  +  Y ++I G C          L  +M + G   + VI   L+D   K G    
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+    +ML   I + VV F  LIDG C+     EA+  F  M  +G+ P+VA +T ++ 
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
               +  +E A  LF  M K  + PD  AY  LID + KH      L L + M    +  
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           D+     ++  L +C  +++A   F+ +I   + PD +   +++  +     +DEA
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 115/247 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK D+  + T++    +E + E++  L   M + GL  + +   TL+DA+ K  +P+  L
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L D M  ++I   +    V+I  L K   + +A  +F  + +  + P++  Y  +I G 
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    ++ A  +F+ +      P+T   T LI    K+     A+ + + M E G   + 
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+   S+   ++ +  LF EM  +GI P  +    ++    +RG +DEA  + ++
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766

Query: 246 MMGRGLL 252
            +   LL
Sbjct: 767 AIDAKLL 773



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 100/242 (41%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +YG ++ GL  +     +     +M    +  N V+  +L+D + +     EAL + 
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M    I+  V TF  ++      G + EA+  F RM   GL P+   Y  LID  CK 
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                   LFD M +  +  D      +I    K    ++A    N + E  ++ D+  Y
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ G      L EA  +F  +      P+ +    L+    +  +MD AI + + M  
Sbjct: 640 NTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 699

Query: 249 RG 250
           +G
Sbjct: 700 KG 701


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I+ DL  Y T+I G            L S+    G+  + V+ ++ +D Y K+G+
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  +   ML   I   VVT+ +LI GLC+ G + EA   +G++   G+ P++  Y++
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSS 431

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   +     L+++M K    PD   Y  L+DG  K      A+    +M    
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L++  + SL+ G  R     EA  +F  M   GI PD     ++++     G ++EA+
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEAL 551

Query: 241 ELQNEMMGRGL 251
            L   M   GL
Sbjct: 552 FLFFRMFKMGL 562



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 115/230 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T+I G C   + + +  L   M++ G+  + +  +TL+D YFKAG       L  + L
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +++ VV F   ID   KSG +  A   + RM   G+ PNV  YT LI GLC+   I 
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  ++ ++ KR M P    Y++LIDG+ K  + +    L   M ++G   D+  Y  LV
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            GLS+ G +  A     +M+G+ I  + ++  SL+         DEA+++
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 3/252 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +K D+ ++ + I           + ++   M   G++ N V  T L+    + G   E
Sbjct: 350 KGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +  ++L   +E ++VT+  LIDG CK G +R     +  M   G  P+V +Y  L+D
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K+  +  A     +M  + +  +   + +LIDG+ +   F EAL +   M   G+  
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  +T+++      G L+EA  LF  M   G+ PD +   +L+    +  +M   I LQ
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK--HMKPTIGLQ 587

Query: 244 -NEMMGRGLLSG 254
             ++M R  +S 
Sbjct: 588 LFDLMQRNKISA 599



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 116/236 (49%), Gaps = 1/236 (0%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GL ++ + E +  LLS + + G   N V   TL++ + K GE   A  L   M    
Sbjct: 258 VLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           IE  ++ +  LIDG  K+G++      F +    G+  +V V+++ ID   K   +  A 
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
            ++  M  + + P+   YT LI G  +     EA  +  ++ + G++  +  Y+SL+ G 
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +CG+L+    L+ +MI  G  PD ++   L+    ++G M  A+    +M+G+ +
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 106/236 (44%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + ++  +  Y ++I G C          L  +M + G   + VI   L+D   K G    
Sbjct: 420 RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+    +ML   I + VV F  LIDG C+     EA+  F  M  +G+ P+VA +T ++ 
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
               +  +E A  LF  M K  + PD  AY  LID + KH      L L + M    +  
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           D+     ++  L +C  +++A   F+ +I   + PD +   +++  +     +DEA
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 76/169 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G++I+ ++ ++ ++I G C  ++F+++  +   M   G+  +    TT+M      G 
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L   M    +E   + +C LID  CK       +  F  M    +  ++AV   
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           +I  L K + IE A   F+ + +  M PD   Y  +I GY       EA
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 655



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 83/200 (41%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ +YG ++ GL  +     +     +M    +  N V+  +L+D + +     EAL + 
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M    I+  V TF  ++      G + EA+  F RM   GL P+   Y  LID  CK 
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKH 579

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                   LFD M +  +  D      +I    K    ++A    N + E  ++ D+  Y
Sbjct: 580 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTY 639

Query: 189 TSLVWGLSRCGHLQEARVLF 208
            +++ G      L EA  +F
Sbjct: 640 NTMICGYCSLRRLDEAERIF 659



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 73/152 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK D+  + T++    +E + E++  L   M + GL  + +   TL+DA+ K  +P+  L
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L D M  ++I   +    V+I  L K   + +A  +F  + +  + P++  Y  +I G 
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           C    ++ A  +F+ +      P+T   T LI
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILI 678



 Score = 47.8 bits (112), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 53/122 (43%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D   Y T+I   C   K      L   M+ N ++A+  +C  ++   FK     +A 
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              + +++ ++E  +VT+  +I G C    + EA   F  +      PN    T LI  L
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681

Query: 126 CK 127
           CK
Sbjct: 682 CK 683


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I   +  Y  +I GL    + E ++    EM+  GL  + +   +L++ Y KAG 
Sbjct: 328 MENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGN 387

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L  ++  + +  TV+T+ +LIDG C+ G + EA      M + G  P+V  YT 
Sbjct: 388 QKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTI 447

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G      +   R  FDEM  + + PD  AY   I   +      ++  L+  +   G
Sbjct: 448 LMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEG 507

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  L+ GL + G+L++A  L  +MI  G+ PD I    L+  H ERG + EA 
Sbjct: 508 ISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREAR 567

Query: 241 ELQNEMMGRGL 251
           +  N+M+  GL
Sbjct: 568 KFFNDMISDGL 578



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 95/192 (49%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           ++    EM   GL  +     T + A    G+ S++  L + ++   I    VT+ +LID
Sbjct: 461 TREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILID 520

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           GLCK+G +++A +   +M   GL P+   YT LI   C++  +  AR  F++M    + P
Sbjct: 521 GLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPP 580

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
               YT +I  Y +  +   A     +M E GV+ +   Y  L+  L R G  Q A   F
Sbjct: 581 SAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHF 640

Query: 209 HEMIGRGILPDE 220
           +EM+ RG++P++
Sbjct: 641 YEMLERGLVPNK 652



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 3/248 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLT--ANTVICTTLMDAYFKAGEPSE 63
           I+  +  Y T++     E + +   +LL EM+  G +   N V    ++    + G   E
Sbjct: 227 IEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEE 286

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L++EM  S+ + +  T+  LI GL   G V++  D    M + G+ P V  Y A+I 
Sbjct: 287 AAELVEEMRLSK-KASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIH 345

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL +   IE A+  F EM    ++PD   Y +L++GY K  + KEAL L   +   G+  
Sbjct: 346 GLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAP 405

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
            +  Y  L+ G  R G L+EAR L  EM+ +G LPD      L+K  +   ++    E  
Sbjct: 406 TVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFF 465

Query: 244 NEMMGRGL 251
           +EM+ +GL
Sbjct: 466 DEMLSKGL 473



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 5/217 (2%)

Query: 37  KENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV 96
           K +  T N +I   L   + K  +      L  EM +  I  TVVT+  +I GL +SG +
Sbjct: 299 KASSFTYNPLITGLLARGFVKKVD-----DLQLEMENEGIMPTVVTYNAMIHGLLQSGQI 353

Query: 97  REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
             A   F  M   GL P+V  Y +L++G CK    + A  LF ++ +  + P    Y  L
Sbjct: 354 EAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNIL 413

Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           IDGY +    +EA  LK  M E G   D+  YT L+ G      L   R  F EM+ +G+
Sbjct: 414 IDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGL 473

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
            PD     + +      G++ ++ +L+  +M  G+ S
Sbjct: 474 RPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISS 510



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 82/158 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I +D   Y  +I GLC     +D++ L+ +M  NGL  + +  T L+ A+ + G   E
Sbjct: 506 EGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLRE 565

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A    ++M+   +  + VT+ V+I   C+ G +  A  +F +M + G+ PN   Y  LI 
Sbjct: 566 ARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 625

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
            LC+    + A   F EM +R ++P+   YT LIDG L
Sbjct: 626 ALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDGKL 663



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 116/287 (40%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D+  Y +++ G C     +++ LL  +++  GL    +    L+D Y + G+
Sbjct: 363 MRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 422

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDG---LCKSGLVREAIDYF---GRMPDF----- 109
             EA  L +EM++      V T+ +L+ G   +C   + RE  D     G  PD      
Sbjct: 423 LEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNT 482

Query: 110 ------------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                   G+  +   Y  LIDGLCK   ++ A  L  +M    
Sbjct: 483 RICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNG 542

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   YT LI  + +    +EA    N M   G+      YT ++    R G+L  A 
Sbjct: 543 LQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAY 602

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             F +M+  G+ P+EI    L+      G    A     EM+ RGL+
Sbjct: 603 GWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLV 649



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 5/220 (2%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           EM  +G+  +   C  ++     A    +  ++  EML   IE ++VT+  L+D   K G
Sbjct: 186 EMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEG 245

Query: 95  LVREAIDYFGR-MPDFGLH--PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             ++ ID   + M   G    PN   Y  +I GL +K  +E A  L +EM +      + 
Sbjct: 246 R-KDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEM-RLSKKASSF 303

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  LI G L     K+  +L+  M   G+   +  Y +++ GL + G ++ A+  F EM
Sbjct: 304 TYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEM 363

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              G+LPD I   SLL  + + GN  EA+ L  ++   GL
Sbjct: 364 RAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGL 403


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 124/242 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ GLC   ++E+++ LL+EM +     + V    L+D + + G 
Sbjct: 309 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 368

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL++ML+      V+T+  +I+G CK GLV EA+     M   G  PN   YT 
Sbjct: 369 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 428

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC+      A+ L   M ++  +P+   +  LI+   K    ++A+ L  +M   G
Sbjct: 429 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG 488

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL +Y++++ GL + G  +EA  L + MI +GI P+ I+  S+       G  D+ I
Sbjct: 489 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII 548

Query: 241 EL 242
           ++
Sbjct: 549 QM 550



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       DL +Y TII G+C +   E +  +LS M   GL  N V   T++     A  
Sbjct: 274 MPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER 333

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM      +  VTF +L+D  C++GLV   I+   +M + G  P+V  YT 
Sbjct: 334 WEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTT 393

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK+  ++ A  L   M      P+T +YT ++ G  + E + +A  L + M + G
Sbjct: 394 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 453

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + +L+  + + G +++A  L  +M+  G  PD I   +++    + G  +EA+
Sbjct: 454 CLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 513

Query: 241 ELQNEMMGRGL 251
           EL N M+ +G+
Sbjct: 514 ELLNVMINKGI 524



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 122/279 (43%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y  ++ GLC+  +++D + L+ EM   G   N     TL+    + G   +   
Sbjct: 210 EPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHE 269

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
            L +M +      +  +  +IDG+CK G    A D   RMP +GL PNV  Y  ++ GLC
Sbjct: 270 ALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLC 329

Query: 127 KKNCIERARNLFDEMPKRD-----------------------------------MIPDTT 151
                E A +L  EM + D                                    IPD  
Sbjct: 330 SAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVI 389

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT +I+G+ K     EA+ L   M+  G   +  +YT ++ GL R     +A+ L   M
Sbjct: 390 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 449

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I +G LP+ +   +L+    ++G +++AIEL  +M+  G
Sbjct: 450 IQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG 488



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 112/241 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NT+  T ++    +A    +A  L+
Sbjct: 387 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 446

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M+        VTF  LI+ +CK GLV +AI+   +M   G  P++  Y+ +IDGL K 
Sbjct: 447 SHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 506

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              E A  L + M  + + P+T  Y+++     +     + + + + + +  V  D   Y
Sbjct: 507 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 566

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L +      A   F  M+  G +P+E     L++     G + EA +L +E+  
Sbjct: 567 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCS 626

Query: 249 R 249
           R
Sbjct: 627 R 627



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 105/235 (44%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  +C +   ++   LL ++   G   + V    ++     A    +   L+ EM+   
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
               V TF  LI  LC++GL  +  +   +MP+ G  P++ +Y  +IDG+CK    E A 
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAN 303

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
           ++   MP   + P+   Y  ++ G    E ++EA +L   M +    LD   +  LV   
Sbjct: 304 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 363

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            + G +     L  +M+  G +PD I   +++    + G +DEA+ L   M   G
Sbjct: 364 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 107/252 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +   A  P+   I+   C    F  +   L  +   G T ++  C  ++ A  + G 
Sbjct: 134 MPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGC 193

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + LL ++     E  +V++  ++ GLC +    +  +    M   G  PNVA +  
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNT 253

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC+    E+      +MP+    PD   Y  +IDG  K    + A ++ +RM   G
Sbjct: 254 LIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYG 313

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y +++ GL      +EA  L  EM       D++    L+    + G +D  I
Sbjct: 314 LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVI 373

Query: 241 ELQNEMMGRGLL 252
           EL  +M+  G +
Sbjct: 374 ELLEQMLEHGCI 385



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 6/202 (2%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           + L+ +   AG  ++A   LD   D+     VV +  +I G C++G V  A      +P 
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDA---AGVVAYNAMIAGYCRAGQVAAARRLAAAVP- 103

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
             + PN   Y  ++  LC +  I  A  + DEMP R           +++   +   F+ 
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A+     +   G  LD      +V  +   G + E   L  ++   G  PD +   ++LK
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 229 KHYERGNMDEAIELQNEMMGRG 250
                   D+  EL  EM+  G
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVG 243



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 50/272 (18%), Positives = 100/272 (36%), Gaps = 41/272 (15%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            +I  LC   +  D+   L      G  A  V    ++  Y +AG+ + A  L   +   
Sbjct: 49  ALIRSLCAAGRTADAARALDTA---GDAAGVVAYNAMIAGYCRAGQVAAARRLAAAV--- 102

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG------------------------ 110
            +     T+  ++  LC  GL+ +A+     MP  G                        
Sbjct: 103 PVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSA 162

Query: 111 ------LHPNVAVYTA-----LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
                 LH       +     ++  +C++ C++    L  ++P     PD  +Y A++ G
Sbjct: 163 VRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
               + + +   L   M  VG   ++  + +L+  L R G  ++      +M   G  PD
Sbjct: 223 LCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPD 282

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +  +++    + G+ + A ++ + M   GL
Sbjct: 283 LRMYATIIDGICKDGHHEVANDILSRMPSYGL 314


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 129/251 (51%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KG N   +L  Y  +I G C     E++  L  EM  +G   + +  T L+ +  K+ +
Sbjct: 379 IKGPN--PNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQ 436

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EM  + +   ++T+  LI GLCK G V++AI  + +M    + PN  ++ A
Sbjct: 437 VDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGA 496

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC+K  I +AR  FD +   ++  D   Y  +IDGY+K  + +EA+ L  ++ E G
Sbjct: 497 ILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKG 556

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  + SL++G      L +AR L   +   G+ P+ +   +L+  + E GNM   +
Sbjct: 557 ISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLL 616

Query: 241 ELQNEMMGRGL 251
           EL +EM  + +
Sbjct: 617 ELLSEMKAKAI 627



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 131/284 (46%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I   +  + ++++G CI  K   ++ LL  +K +GL  N V  TTLM+ Y + G    
Sbjct: 555 KGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQS 614

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            L LL EM    I  T +T+ V+I GLCK   ++E+      M   GL P+   Y  +I 
Sbjct: 615 LLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQ 674

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA----LNLKNR---- 175
             CK   + +A  L+D+M   ++ P +  Y  LI+G+  +   K+A    ++L+NR    
Sbjct: 675 AFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNL 734

Query: 176 ---------------------------MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
                                      M E G ++ +  Y++++  L +   + EA+  F
Sbjct: 735 NKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFF 794

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             M+  G+ PD+ L   LL   ++ G+++   EL  EM+  G L
Sbjct: 795 CMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ DL  Y T+I GLC + + + + LL  +M  N +  N++I   ++    + G+
Sbjct: 447 MEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGK 506

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A    D ++ S + + ++ + ++IDG  K G  REA+  + ++ + G+ P +  + +
Sbjct: 507 ISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNS 566

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    + +AR L D +    + P+   YT L++ Y +  + +  L L + M    
Sbjct: 567 LMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKA 626

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YT ++ GL +   LQE+  L  +M   G+ PD++   ++++   +  +M +A 
Sbjct: 627 IGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAF 686

Query: 241 ELQNEMMGRGL 251
           +L ++M+   L
Sbjct: 687 QLYDKMLLHNL 697



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 112/240 (46%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GLC +S+F+D+ L   + +      + V   T+M  Y K G    A S    ML   
Sbjct: 252 VVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHG 311

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
           +     ++ +LI GLC +G + EA+D    M + GL P++  Y  L  G      I  A 
Sbjct: 312 LLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAW 371

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
           N+  +M  +   P+   YT LI G+ +  + +EAL L   M   G  L + + T L+  L
Sbjct: 372 NIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSL 431

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            +   +  A  LF EM   G+ PD I   +L+    ++G + +AI L  +M    ++  S
Sbjct: 432 CKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNS 491



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 104/217 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I      Y  +I GLC + K ++S  LL +M   GLT + V   T++ A+ KA +
Sbjct: 622 MKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARD 681

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L D+ML   +E T VT+ +LI+G C  G +++A +    + +  ++ N   YT 
Sbjct: 682 MRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTT 741

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   C K  +++A   F +M ++        Y+A+I    K     EA      M   G
Sbjct: 742 IIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDG 801

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           V  D + +  L+    +CGHL     L  EMI  G L
Sbjct: 802 VCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 112/238 (47%), Gaps = 4/238 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++G I+ GLC + K   +++    +  + L+ + ++   ++D Y K G   EA+ L  ++
Sbjct: 493 IHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQL 552

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +  I  T+VTF  L+ G C +  + +A      +   GL PN   YT L++  C++  +
Sbjct: 553 GEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNM 612

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +    L  EM  + + P    YT +I G  K    +E+  L   M  VG+  D  +Y ++
Sbjct: 613 QSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTI 672

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA----IELQNE 245
           +    +   +++A  L+ +M+   + P  +    L+      G++ +A    + LQN 
Sbjct: 673 IQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNR 730



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 116/247 (46%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+  D+ LY  +I G        ++  L  ++ E G++   V   +LM  +    + S+A
Sbjct: 521 NLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQA 580

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
             LLD +    +E   VT+  L++  C+ G ++  ++    M    + P    YT +I G
Sbjct: 581 RRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKG 640

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           LCK+  ++ +  L ++M    + PD  +Y  +I  + K    ++A  L ++M    ++  
Sbjct: 641 LCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPT 700

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
              Y  L+ G    G L++A  L   +  R +  ++    +++K H  +G++D+A+    
Sbjct: 701 SVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFR 760

Query: 245 EMMGRGL 251
           +M+ +G 
Sbjct: 761 QMVEKGF 767



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 111/238 (46%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +GK  +  +  + TI+   C     + +K     M ++GL  +      L+     AG  
Sbjct: 273 EGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSM 332

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EAL L ++M +  +E  +VT+ +L  G    GL+  A +   +M   G +PN+  YT L
Sbjct: 333 GEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVL 392

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I G C+   +E A  L+ EM          + T L+    K      A  L   M   G+
Sbjct: 393 ICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGL 452

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             DL  Y++L+ GL + G +Q+A +L+ +M    I+P+ ++  ++L    E+G + +A
Sbjct: 453 RPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQA 510



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 13/233 (5%)

Query: 19  GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
            L +  K +D   ++S    N L  N      + D Y             +E+  S    
Sbjct: 198 ALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVY-------------NEIKVSGTPQ 244

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
           +  T  +++DGLC+    ++A+ +F         P+V  +  ++   CK   ++ A++ F
Sbjct: 245 SEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFF 304

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
             M K  ++PD  +Y  LI G     S  EAL+LKN M   G++ D+  Y  L  G    
Sbjct: 305 CMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLL 364

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G +  A  +  +M+ +G  P+ +    L+  H + GN++EA++L  EM+  G 
Sbjct: 365 GLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGF 417



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 109/251 (43%), Gaps = 3/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  N    +  Y ++++ L   +   D   + +E+K +G   +    + ++D   +   
Sbjct: 205 MKDLNFIVSIQTYNSLLYNLRHSNIMWD---VYNEIKVSGTPQSEYTSSIVVDGLCRQSR 261

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+    +      + +VV+F  ++   CK G V  A  +F  M   GL P+   Y  
Sbjct: 262 FQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNI 321

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC    +  A +L ++M    + PD   Y  L  G+        A N+  +M   G
Sbjct: 322 LIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKG 381

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + +L  YT L+ G  + G+++EA  L+ EMI  G     I    LL    +   +D A 
Sbjct: 382 PNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAF 441

Query: 241 ELQNEMMGRGL 251
           +L  EM   GL
Sbjct: 442 KLFCEMEANGL 452


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 124/252 (49%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  +L +Y T+I GLC +   +++  L +EM ENG+  +     +++  +   G 
Sbjct: 201 MKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGR 260

Query: 61  PSEALSLLDEM-LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              A+ LLDEM +  ++   V TF +LIDGLCK G V EA +    M   G  P++  Y 
Sbjct: 261 FQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYN 320

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           AL++G C    +  A+ +FD+M +R  +P+  +Y  LI+GY K     EA+ L   M   
Sbjct: 321 ALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNK 380

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            +  D   Y  L+ GLS+ G       L   M   G   D I    LL  +++    D+A
Sbjct: 381 NLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKA 440

Query: 240 IELQNEMMGRGL 251
           + L   ++  G+
Sbjct: 441 LALFQHIIEIGI 452



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 1/248 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + D+ +  T++ GLC++ +  ++  LL E  + G   + V   T+++   K G+  +A+
Sbjct: 136 FQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAI 195

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M   R+   ++ +  +IDGLCK GLV EA      M + G+  +V  Y ++I G 
Sbjct: 196 QMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGF 255

Query: 126 CKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           C     + A  L DEM  R  + PD   +  LIDG  K     EA N+   M + G   D
Sbjct: 256 CSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPD 315

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           + +Y +L+ G    G + EA+ +F +M+ R  LP+ I   +L+  + +   +DEA+ L  
Sbjct: 316 IVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLT 375

Query: 245 EMMGRGLL 252
           EM  + L+
Sbjct: 376 EMHNKNLV 383



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 1/219 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +  + D   YGTII GLC   K  D+  +  +MK+  +  N ++  T++D   K G   E
Sbjct: 169 RGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDE 228

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYTALI 122
           A  L  EM+++ IE+ V ++  +I G C  G  + A+     M   G ++P+V  +  LI
Sbjct: 229 ACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILI 288

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK   +  A N+   M KR   PD  +Y AL++GY    S  EA  + ++M E    
Sbjct: 289 DGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTAL 348

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
            ++ +Y +L+ G  +   + EA VL  EM  + ++PD +
Sbjct: 349 PNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTV 387



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 1/222 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           LL  + + G   +  I TTLM      G   EA+SLL E +D       V +  +I+GLC
Sbjct: 127 LLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLC 186

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G  R+AI  F +M    ++PN+ +Y  +IDGLCK+  ++ A  L  EM +  +  D  
Sbjct: 187 KIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVY 246

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVG-VDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
           +Y ++I G+     F+ A+ L + M   G V  D+  +  L+ GL + G + EA  +   
Sbjct: 247 SYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAV 306

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           MI RG  PD +   +L+  +   G++ EA ++ ++M+ R  L
Sbjct: 307 MIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTAL 348



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 1/203 (0%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           + L++A+ + G+   A SLL  +L    ++ V     L+ GLC  G V EA+       D
Sbjct: 109 SILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVD 168

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            G   +   Y  +I+GLCK      A  +F +M K  + P+   Y  +IDG  K     E
Sbjct: 169 RGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDE 228

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG-ILPDEILCISLL 227
           A  L   M E G++LD+ +Y S++ G    G  Q A  L  EM+ RG + PD      L+
Sbjct: 229 ACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILI 288

Query: 228 KKHYERGNMDEAIELQNEMMGRG 250
               + G + EA  +   M+ RG
Sbjct: 289 DGLCKLGRVSEAYNVVAVMIKRG 311



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 99/221 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ G C+     ++K +  +M E     N +   TL++ Y K   
Sbjct: 307 MIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRM 366

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL EM +  +    VT+  L+DGL KSG      D    M   G   ++  Y  
Sbjct: 367 VDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNV 426

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D   K    ++A  LF  + +  + P+   Y  L+DG  K    K A  +   ++  G
Sbjct: 427 LLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKG 486

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
              ++  Y  ++ GL + G L EA  L ++M+    LP+ I
Sbjct: 487 CQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYI 527



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 81/161 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  D   Y  ++ GL    +      L+  M+ +G  A+ +    L+D YFK  +
Sbjct: 377 MHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEK 436

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL+L   +++  I   + T+ +L+DGLCKSG ++ A + F  +   G  PN+  Y  
Sbjct: 437 FDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNI 496

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
           +I GLCK+  ++ A  L  +M   + +P+   +  ++   L
Sbjct: 497 MIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537



 Score = 45.4 bits (106), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 37/191 (19%)

Query: 63  EALSLLDEMLDSR--IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            A+  L  +L S+  I+ +++TF +LI+   + G +  A    G +   G   +V + T 
Sbjct: 86  NAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTT 145

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC K  +  A +L  E   R                                   G
Sbjct: 146 LMKGLCLKGRVLEAVSLLHEYVDR-----------------------------------G 170

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +++ GL + G  ++A  +F +M    + P+ I+  +++    ++G +DEA 
Sbjct: 171 FRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEAC 230

Query: 241 ELQNEMMGRGL 251
            L  EM+  G+
Sbjct: 231 GLCTEMVENGI 241



 Score = 43.1 bits (100), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 53/128 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+     ADL  Y  ++       KF+ +  L   + E G++ N      L+D   K+G 
Sbjct: 412 MRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGR 471

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +   +     +  + T+ ++I GLCK G + EA     +M +    PN   +  
Sbjct: 472 LKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDT 531

Query: 121 LIDGLCKK 128
           ++  +  K
Sbjct: 532 IVRAILVK 539


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 122/254 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  K D  +YGT++ G   E        LL  M  NG   +  I   L+ AY K G 
Sbjct: 302 MVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGM 361

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+    +M    +   +VT+  ++D LC+ G V +A+  F R+   GL PN  V+  
Sbjct: 362 VDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRT 421

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC  +  ++A  L  EM  R + P+T  +  L++   K      A N+ + M  V 
Sbjct: 422 LIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD 481

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  YT+L+ G    G + EA  L   M+  G+ P+E+   +++  + + G +++A 
Sbjct: 482 VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDAC 541

Query: 241 ELQNEMMGRGLLSG 254
            L  +M  +G+  G
Sbjct: 542 SLFRQMASKGVNPG 555



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 120/243 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I GL  E + + +  L  EM + G++ N +    L+  Y  +G+P EA+ + 
Sbjct: 205 DVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIF 264

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M    +E  VVT+  L+  LCK+G   EA   F  M   G  P+ ++Y  L+ G   +
Sbjct: 265 RKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATE 324

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             + +   L D M +    PD   +  LI  Y KH    EA+   ++M + G+  ++  Y
Sbjct: 325 GYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTY 384

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L R G + +A   F  +I  G+ P+ ++  +L+         D+A EL  EM+G
Sbjct: 385 GTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIG 444

Query: 249 RGL 251
           RG+
Sbjct: 445 RGI 447



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 16/249 (6%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           ++ T+I GLC   K++ ++ L  EM   G+  NT+   TL++   K G  + A ++ D M
Sbjct: 418 VFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLM 477

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++  V+T+  LIDG C  G V EA      M   G+ PN   Y  +I+G CK   I
Sbjct: 478 VRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRI 537

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A +LF +M  + + P    Y+ ++ G  +      A  L   M + G+ L +  Y  +
Sbjct: 538 EDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNII 597

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPD--------EILCISLLKKHYERGNMDEAIELQ 243
           + GL +     +A  +FH +     L D         I+  +LLK     G  DEA +L 
Sbjct: 598 LQGLCQNNCTDDALRMFHNL----CLIDFHLQNRTFNIMIDALLKG----GRHDEAKDLF 649

Query: 244 NEMMGRGLL 252
             ++ RGL+
Sbjct: 650 ASLLARGLV 658



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 1/219 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  ++  YGT++  LC   K +D+      +   GLT N V+  TL+       +
Sbjct: 372 MRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDK 431

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  EM+   I    + F  L++ LCK G+V  A + F  M    +  +V  YT 
Sbjct: 432 WDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTT 491

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L + M    + P+   Y  +I+GY K+   ++A +L  +M   G
Sbjct: 492 LIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKG 551

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI-LP 218
           V+  +  Y++++ GL +   +  A+ L+  MI  GI LP
Sbjct: 552 VNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLP 590



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 114/234 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ I  +   + T++  LC E     +K +   M    +  + +  TTL+D Y   G+
Sbjct: 442 MIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGK 501

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+ M+   ++   VT+  +I+G CK+G + +A   F +M   G++P + +Y+ 
Sbjct: 502 VDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYST 561

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GL +   I  A+ L+  M K  +      Y  ++ G  ++    +AL + + +  + 
Sbjct: 562 ILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLID 621

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
             L    +  ++  L + G   EA+ LF  ++ RG++P+ +    ++K   E+G
Sbjct: 622 FHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 40/234 (17%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY-FGRMPDFGLHPN- 114
           +AG    A + L  ++ +      +TF  L+ GLC      +A+D    RMP  G  PN 
Sbjct: 108 RAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNA 167

Query: 115 --------------------------------------VAVYTALIDGLCKKNCIERARN 136
                                                 V  YT +I+GL ++  +++A  
Sbjct: 168 FSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYC 227

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           LFDEM  + M P+   Y  L+ GY      KEA+ +  +M   GV+ D+  Y +L+  L 
Sbjct: 228 LFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLC 287

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + G   EAR +F  M+ +G  PD  +  +LL  +   G + +  +L + M+  G
Sbjct: 288 KNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNG 341



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 95/206 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K +   Y TII G C   + ED+  L  +M   G+    VI +T++   F+    + A 
Sbjct: 517 VKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAK 576

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L   M+   I++ + T+ +++ GLC++    +A+  F  +     H     +  +ID L
Sbjct: 577 ELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDAL 636

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K    + A++LF  +  R ++P+   Y  ++   ++    +E  +L   + + G   D 
Sbjct: 637 LKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADS 696

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEM 211
               +LV  L + G +++A V   ++
Sbjct: 697 RMLNALVGKLPQKGEVRKAGVYLSKI 722



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 9/197 (4%)

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
            P+ ALSL + M        + T+ ++I    ++G +  A    GR+   G       ++
Sbjct: 80  SPAVALSLFNRM----PRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFS 135

Query: 120 ALIDGLCKKNCIERARNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-- 176
            L+ GLC       A ++    MP     P+  +Y  L+ G       ++AL+L + M  
Sbjct: 136 PLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMA 195

Query: 177 --TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
             T  G   D+ +YT+++ GL R G L +A  LF EM+ +G+ P+ I    LL  +   G
Sbjct: 196 DDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSG 255

Query: 235 NMDEAIELQNEMMGRGL 251
              EAI +  +M   G+
Sbjct: 256 KPKEAIGIFRKMCRDGV 272


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 121/249 (48%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G N   ++  Y T+I G   E     +  L  +M ++G+  N V C +++D   K     
Sbjct: 245 GDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMD 304

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A ++L +M+D  I     T+  LI G   SG   EA+     M   G  PNV  Y+ LI
Sbjct: 305 KAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLI 364

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK      AR +F+ M +    P+ + Y +L+ GY    +  +  N+K+ M + G+ 
Sbjct: 365 DCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMR 424

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
              + +   ++   +CG L EA + F++M  +G +PD +   +++    + G +D+A+  
Sbjct: 425 PGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSR 484

Query: 243 QNEMMGRGL 251
             +M+  GL
Sbjct: 485 FCQMIDDGL 493



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 118/237 (49%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++I GLC     + ++ +L +M +  +  N     +L+  Y  +G+ +EA+ +L EM   
Sbjct: 292 SVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRD 351

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
                VVT+ +LID LCKSGL  EA + F  M   G  PN + Y +L+ G   +  +   
Sbjct: 352 GQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDM 411

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            N+ D M +  M P    +   I  Y K     EA    N+M + G   D+ AYT+++ G
Sbjct: 412 NNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDG 471

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L + G L +A   F +MI  G+ PD I   +L+      G  ++A EL  EMM RG+
Sbjct: 472 LCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGI 528



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 3/252 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           ++A    +  ++  LC E +  D+  ++L  M E G T +    TTL+       +  EA
Sbjct: 175 LRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEA 234

Query: 65  LSLLDEMLDS--RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
             L+  M +        VV++  +I G  K G V +A   F +M D G+ PNV    ++I
Sbjct: 235 AELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVI 294

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGLCK   +++A  +  +M    ++P+ T Y +LI GYL    + EA+ +   M+  G  
Sbjct: 295 DGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQR 354

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y+ L+  L + G   EAR +F+ MI  G  P+     SLL  +   GN+ +   +
Sbjct: 355 PNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNV 414

Query: 243 QNEMMGRGLLSG 254
           ++ M+  G+  G
Sbjct: 415 KDLMVQNGMRPG 426



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 19/263 (7%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K +   YG+++ G   E    D   +   M +NG+     +    + AY K G   EA  
Sbjct: 389 KPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASL 448

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
             ++M        +V +  +IDGLCK G + +A+  F +M D GL P++  +  LI G  
Sbjct: 449 TFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFA 508

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                E+A  LF EM  R + P+   + ++ID   K     EA  L + M   G   ++ 
Sbjct: 509 LHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVV 568

Query: 187 AYTSLVWGLSRCGHLQEA-------------------RVLFHEMIGRGILPDEILCISLL 227
           +Y +++ G    G + E                      L   M+  G+ PD + C +L+
Sbjct: 569 SYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLI 628

Query: 228 KKHYERGNMDEAIELQNEMMGRG 250
               E G +++ + L  EM+G+ 
Sbjct: 629 DSCCEDGRIEDILTLFREMLGKA 651



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++I  +   Y ++I G     ++ ++  +L EM  +G   N V  + L+D   K+G 
Sbjct: 313 MIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGL 372

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGL------------------------------ 90
            +EA  + + M+ S  +    T+  L+ G                               
Sbjct: 373 HAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNI 432

Query: 91  -----CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                CK G + EA   F +M   G  P++  YT +IDGLCK   ++ A + F +M    
Sbjct: 433 EIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDG 492

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   +  LI G+  H  +++A  L   M + G+  ++N + S++  L + G + EAR
Sbjct: 493 LSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEAR 552

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            LF  M   G  P+ +   +++  ++  G + E ++L ++M+  GL
Sbjct: 553 KLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGL 598



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 16/221 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +    D+  Y T+I GLC   + +D+     +M ++GL+ + +   TL+  +   G+
Sbjct: 453 MQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGK 512

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  EM+D  I   V TF  +ID L K G V EA   F  MP  G  PNV  Y  
Sbjct: 513 WEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNT 572

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G      +     L D+M    + P    +  L+DG                M  +G
Sbjct: 573 MIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMG 616

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D+    +L+      G +++   LF EM+G+    D I
Sbjct: 617 LKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTI 657



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 6/193 (3%)

Query: 61  PSEALSLLDEMLDS---RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
           P+ A+S+ + M  +   ++   + TF +LI   C +G +       G++   GL      
Sbjct: 122 PALAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVT 181

Query: 118 YTALIDGLCKKNCIERARNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +T L+  LC +     A N+    MP+    PD  +YT L+ G    +  +EA  L + M
Sbjct: 182 FTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMM 241

Query: 177 TEVGVDLDLN--AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            E G +   N  +YT+++ G  + G + +A  LF +M+  GI P+ + C S++    +  
Sbjct: 242 AEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQ 301

Query: 235 NMDEAIELQNEMM 247
            MD+A  +  +M+
Sbjct: 302 AMDKAEAVLQQMI 314


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K D+  Y  II  LC     + ++L+L +M  +G   +TV  + ++  Y   G 
Sbjct: 291 MTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGR 350

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +  EM    +   +VT    +  LCK G  +EA ++F  M   G  P++  Y  
Sbjct: 351 LKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCT 410

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   + C      LF+ M    +  +   +T LI  Y K     +A+ +   M + G
Sbjct: 411 LLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQG 470

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y++++   SR G L +A   F++M+ RGI P+  +  S+++     G + +A 
Sbjct: 471 VSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAK 530

Query: 241 ELQNEMMGRGL 251
           EL +EM+ +G+
Sbjct: 531 ELVSEMINKGI 541



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 116/250 (46%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G     D+  Y T+I G   E +   +  L  EM   G+  + V    ++DA  KA   
Sbjct: 257 QGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAM 316

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +A  +L +M     +   VT+  +I G    G ++EA   F  M   GL PN+    + 
Sbjct: 317 DKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSF 376

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +  LCK    + A   FD M  +   PD  +Y  L+ GY     F + + L N M   G+
Sbjct: 377 LASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGI 436

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             + + +T L+   ++ G + +A ++F EM  +G+ PD +   +++      G + +A+E
Sbjct: 437 AANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAME 496

Query: 242 LQNEMMGRGL 251
             N+M+ RG+
Sbjct: 497 KFNQMVARGI 506



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 1/216 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D+  Y T+I       +  D+    ++M   G+  NT + ++++  +   G 
Sbjct: 466 MQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGG 525

Query: 61  PSEALSLLDEMLDSRI-EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             +A  L+ EM++  I    +V F  +I+ LCK G V +A D F    D G  P V  + 
Sbjct: 526 LVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFN 585

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           +LIDG C    +++A  + D M    + PD   Y  L+DGY K+    + L L   M   
Sbjct: 586 SLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRK 645

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           GV  +   Y  ++ GL R G    AR  FHEMI  G
Sbjct: 646 GVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESG 681



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 1/240 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D   Y  +I G     + +++  +  EMK+ GL  N V C + + +  K G 
Sbjct: 326 MTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGR 385

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA    D M     +  + ++C L+ G    G   + I  F  M   G+  N  V+T 
Sbjct: 386 SKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTI 445

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI    K+  ++ A  +F EM ++ + PD   Y+ +I  + +     +A+   N+M   G
Sbjct: 446 LIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARG 505

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI-LPDEILCISLLKKHYERGNMDEA 239
           +  +   Y+S++ G    G L +A+ L  EMI +GI  PD +   S++    + G + +A
Sbjct: 506 IQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDA 565



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 121/240 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + ++I G C+  K + +  +L  M+  G+  + V   TL+D YFK G  ++ L+L  EM 
Sbjct: 584 FNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQ 643

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++   VT+ +++ GL ++G    A   F  M + G    V++Y  ++ GLC+ NC +
Sbjct: 644 RKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCAD 703

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF ++   ++    T    +I+   K +  +EA  L   ++  G+  + + Y  ++
Sbjct: 704 EAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMI 763

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L + G +++A  +F  M   GI+P   L   +++   E+G + +A    +++ G+ +L
Sbjct: 764 INLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRIL 823



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 119/254 (46%), Gaps = 8/254 (3%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  + ++I  LC + +  D+  +     + G     +   +L+D Y   G+  +A  
Sbjct: 543 RPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFK 602

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +LD M    +E  +VT+  L+DG  K+G + + +  F  M   G+ PN   Y  ++ GL 
Sbjct: 603 ILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLF 662

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +      AR  F EM +       + Y  ++ G  ++    EA+ L  ++  + V   + 
Sbjct: 663 RAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSIT 722

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE----ILCISLLKKHYERGNMDEAIEL 242
              +++  + +    +EA+ LF  +   G+LP+E    ++ I+LLK     G +++A  +
Sbjct: 723 ILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKD----GGVEDANNM 778

Query: 243 QNEMMGRGLLSGSK 256
            + M   G++ GS+
Sbjct: 779 FSSMEKSGIVPGSR 792



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 5/215 (2%)

Query: 43  ANTVICT--TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           A    CT   LMD   +A  P   L+L   +L + +++  +T   L+  LC +    EA+
Sbjct: 153 AVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAV 212

Query: 101 DYF-GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD--MIPDTTAYTALI 157
           +    RM + G  PN   Y+ ++  LC  +  +RA +L   M K+     PD  AY+ +I
Sbjct: 213 NVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVI 272

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
            G+       +A +L + MT  GV  D+  Y  ++  L +   + +A ++  +M   G  
Sbjct: 273 HGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQ 332

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           PD +    ++  +   G + EA ++  EM  RGL+
Sbjct: 333 PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLI 367



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 107/237 (45%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  Y T++ G     +  D   L  EM+  G+  NTV    ++   F+AG    A 
Sbjct: 612 VEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAAR 671

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
               EM++S   VTV  + +++ GLC++    EAI  F ++    +  ++ +   +I+ +
Sbjct: 672 KKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAM 731

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K    E A+ LF  +    ++P+ + Y  +I   LK    ++A N+ + M + G+    
Sbjct: 732 YKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGS 791

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
                ++  L   G + +A     ++ G+ IL +      +L     +G   E I+L
Sbjct: 792 RLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKL 848


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 117/247 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K  +P+Y  +I G+C E + E +  LL EM +NG+  N V  + ++++   +G    A 
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  +M     +  + TF  LI G    G + EA+D +  M   G  PNV  Y  LI GL
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    +E A  + D+M +   +P+ T Y+ LIDG+ K      A    NRM   G   ++
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT +V  L +     +A  L  +M   G  P+ +   + +K     G ++ A++L   
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLER 479

Query: 246 MMGRGLL 252
           M G G L
Sbjct: 480 MQGHGCL 486



 Score =  113 bits (283), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 110/230 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC     E++  +  +M+ +G   N    + L+D + K+G+   A    + M+
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VVT+  ++D LCK+ +  +A     +M   G  PN   +   I GLC    +E
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L + M     +P+ T Y  L+D   +   ++EA  L   +    +  +L  Y +++
Sbjct: 472 WAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVL 531

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           +G SR G + EA  LF + + RG  PD I   +++  + ++G +  A +L
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 5/250 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   +  ++  Y  ++  LC   + + +  L  EM   G   + V  TT++ +  KAG+
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A       L  R + +V  +  LIDG+CK G +  AI   G M D G+ PNV  Y+ 
Sbjct: 230 IDDA-----RELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSC 284

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LC    +E A  LF +M  R    +   +T LI G        EAL+L   M + G
Sbjct: 285 IINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDG 344

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + ++ AY +L+ GL   G L+EA  +  +M   G LP+      L+    + G++  A 
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGAS 404

Query: 241 ELQNEMMGRG 250
           E  N M+  G
Sbjct: 405 ETWNRMISHG 414



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 115/243 (47%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           A++  +  +I G  +  K  ++  L   M ++G   N V   TL+      G   EAL +
Sbjct: 312 ANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQV 371

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            D+M  S     V T+ +LIDG  KSG +  A + + RM   G  PNV  YT ++D LCK
Sbjct: 372 CDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCK 431

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
            +  ++A +L ++M      P+T  +   I G   +   + A+ L  RM   G   ++  
Sbjct: 432 NSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITT 491

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  L+  L R    +EA  LF E+  R + P+ +   ++L      G M EA++L  + +
Sbjct: 492 YNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKAL 551

Query: 248 GRG 250
            RG
Sbjct: 552 VRG 554



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 110/251 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  Y  II  LC+    E +  L ++M   G  AN    T L+   F  G+
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL L   M+    E  VV +  LI GLC +G + EA+    +M   G  PNV  Y+ 
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   +  A   ++ M      P+   YT ++D   K+  F +A +L  +MT  G
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + + + GL   G ++ A  L   M G G LP+      LL   +     +EA 
Sbjct: 450 CTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509

Query: 241 ELQNEMMGRGL 251
            L  E+  R L
Sbjct: 510 GLFQEIEARNL 520



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 5/246 (2%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K  + +Y  ++  L  E+KF+    L + MK++GL  N      L+ A  K      A  
Sbjct: 141 KPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHK 200

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  EM +       VT+  ++  LCK+G + +A +  GR       P+V VY ALIDG+C
Sbjct: 201 LFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYNALIDGMC 255

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+  IE A  L  EM    + P+  +Y+ +I+      + + A  L  +M   G D +++
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +T L+ G    G L EA  L+  MI  G  P+ +   +L+      G+++EA+++ ++M
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375

Query: 247 MGRGLL 252
              G L
Sbjct: 376 QRSGCL 381



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 1/245 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  Y  ++  LC  S F+ +  L+ +M   G T NT+   T +      G    A+ 
Sbjct: 416 RPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMK 475

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL+ M        + T+  L+D L +     EA   F  +    L PN+  Y  ++ G  
Sbjct: 476 LLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFS 535

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG-VDLDL 185
           +   +  A  LF +   R   PD+  Y  +I  Y K    K A  L  R++ +     D+
Sbjct: 536 RAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDI 595

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YTSL+WG     +++EA     + I +GI P+     +L++  ++       I + ++
Sbjct: 596 ITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDD 655

Query: 246 MMGRG 250
           ++ +G
Sbjct: 656 ILRKG 660



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 106/250 (42%), Gaps = 7/250 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G N   DL  +  II G       E +  +   + E G      I   L+DA     +
Sbjct: 102 MDGINCCEDL--FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENK 159

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 L   M    +   V T+ +L+  LCK+  V  A   F  M + G  P+   YT 
Sbjct: 160 FQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTT 219

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LCK   I+ AR L          P    Y ALIDG  K    + A+ L   M + G
Sbjct: 220 MVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNG 274

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           VD ++ +Y+ ++  L   G+++ A  LF +M  RG   +      L+K  + RG + EA+
Sbjct: 275 VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEAL 334

Query: 241 ELQNEMMGRG 250
           +L   M+  G
Sbjct: 335 DLWKLMIQDG 344



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 5/169 (2%)

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           F  +I+G  + G   +A+  F R+ +FG  P V +Y  L+D L  +N  +    L+  M 
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           K  +IP+   Y  L+    K++    A  L   M+  G   D   YT++V  L + G + 
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +AR    E+ GR   P   +  +L+    + G ++ AI+L  EMM  G+
Sbjct: 232 DAR----ELAGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV 275



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 1/162 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G     ++  Y  ++  L   +K+E++  L  E++   L  N V   T++  + +AG 
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYT 119
             EAL L  + L        +T+  +I   CK G V+ A     R+      HP++  YT
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYT 599

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
           +LI G C    IE A    D+   + + P+   + AL+  + 
Sbjct: 600 SLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFF 641


>gi|357493977|ref|XP_003617277.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518612|gb|AET00236.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 502

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 141/295 (47%), Gaps = 44/295 (14%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  DL  + +II       +   +     +MK  GL  +TVI T L++ Y +  + S AL
Sbjct: 207 VVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNNDVSGAL 266

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + +EM++    + VVT+  L++GLC+  ++ +A + F  M + G+ P+    T LI G 
Sbjct: 267 KVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGY 326

Query: 126 CK----------------KNCIERARNLFDEMPKRDMIPDTTAYT--------------A 155
           CK                ++ +E+A+ L+ +M  R++ P   +++              +
Sbjct: 327 CKDGNMTKALSLFETITLRSEMEKAKELWRDMISREIFPHYISFSILINGFCSLGLVSES 386

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLD--------------LNAYTSLVWGLSRCGHL 201
           LI GYL+  +  +A +  N M   GV  D              L  Y +++ G SR G +
Sbjct: 387 LIKGYLRAGNVSKANDFLNTMVSEGVPPDCITYNTLINRLLPDLVTYNAILGGFSRHGRM 446

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
           QEA ++ H+MI +GI PD+    S++  +  + NM EA  + +EM+ RG +   K
Sbjct: 447 QEAEMVLHKMIDKGINPDKSTYTSVINGYVSKDNMKEAFRVHDEMLQRGFVPDDK 501



 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 30/281 (10%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +K  L  Y  +I GLC E  +E +K +L +M   G   +      ++   F+  +
Sbjct: 132 MEAKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKED 191

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + +EML   +   +++F  +I    ++G +  A+ YF +M   GL P+  +YT 
Sbjct: 192 VWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 251

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C+ N +  A  + +EM +R  + D   Y  L++G  + +   +A  L   M E G
Sbjct: 252 LINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 311

Query: 181 VDLDLNAYTSLVWGLSRCGH----------------LQEARVLFHEMIGRGILPDEI--- 221
           V  D    T+L+ G  + G+                +++A+ L+ +MI R I P  I   
Sbjct: 312 VFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAKELWRDMISREIFPHYISFS 371

Query: 222 -----------LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
                      +  SL+K +   GN+ +A +  N M+  G+
Sbjct: 372 ILINGFCSLGLVSESLIKGYLRAGNVSKANDFLNTMVSEGV 412



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 2/228 (0%)

Query: 30  KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF-CVLID 88
           ++ LSEM+  GL         L++   K G    A  +LD+ML         TF  VL++
Sbjct: 126 RVYLSEMEAKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVE 185

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
              K   V EA   F  M   G+ P++  ++++I    +   + RA   F++M    ++P
Sbjct: 186 SFRKED-VWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVP 244

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           DT  YT LI+GY ++     AL ++N M E    +D+  Y +L+ GL R   L +A  LF
Sbjct: 245 DTVIYTILINGYCRNNDVSGALKVRNEMVERSCVMDVVTYNTLLNGLCRGKMLDDADELF 304

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
            EM+ RG+ PD     +L+  + + GNM +A+ L   +  R  +  +K
Sbjct: 305 KEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETITLRSEMEKAK 352



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 10/208 (4%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS--GLVREAID 101
           N V+   L+  Y +A +  E      ++L  R       FCV I+  C +  G + +   
Sbjct: 76  NVVVFDLLIRTYVQARKLREGFEAF-QLLRKR------GFCVSINA-CNALLGSIVKVRV 127

Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
           Y   M   GL P +  Y ALI+GLCK+   E A+ + D+M      PD   +  ++    
Sbjct: 128 YLSEMEAKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESF 187

Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           + E   EA  + N M + GV  DL +++S++   SR G L  A   F +M G G++PD +
Sbjct: 188 RKEDVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLVPDTV 247

Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGR 249
           +   L+  +    ++  A++++NEM+ R
Sbjct: 248 IYTILINGYCRNNDVSGALKVRNEMVER 275



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 6/173 (3%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           VV F +LI    ++  +RE  + F  +   G   ++    AL+  + K       R    
Sbjct: 77  VVVFDLLIRTYVQARKLREGFEAFQLLRKRGFCVSINACNALLGSIVK------VRVYLS 130

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM  + + P    Y ALI+G  K   ++ A  + ++M  VG   D   +  ++    R  
Sbjct: 131 EMEAKGLKPGLFTYNALINGLCKEGGYESAKCVLDKMLGVGFCPDAATFNPVLVESFRKE 190

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            + EA  +F+EM+  G++PD I   S++      G +  A+    +M G GL+
Sbjct: 191 DVWEAERVFNEMLQCGVVPDLISFSSIIGVFSRNGELGRALAYFEKMKGVGLV 243


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +  + ++  Y ++I GL      + +  L  EM   GL A  V+  +L+    ++G 
Sbjct: 185 MKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGR 244

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L  EML   ++   VTF  L+ GL  +G   EA   F    D G   +V +Y  
Sbjct: 245 ADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNV 304

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++ A  +F E+ +  ++PD   + AL+DG  K     +A  L   M   G
Sbjct: 305 LIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG 364

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y +L+ GL + G ++EA  L  EM   G  PD +   +L+ +  + G +++A+
Sbjct: 365 CTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDAL 424

Query: 241 ELQNEMMGRGL 251
            L  E+  +G 
Sbjct: 425 RLFEEISAKGF 435



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 115/252 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+G         Y ++I         + +  +   M ++GL  +T     LM+A+ KA  
Sbjct: 80  MEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKR 139

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                 L +EM +      V+T+ +LID +CK G V +A+  F  M   G  PN+  YT+
Sbjct: 140 VDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTS 199

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGL K   +++A  LF+EM    ++     Y +LI G  +      A  L   M   G
Sbjct: 200 MIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKG 259

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   +TSLV+GL   G   EAR +F E    G   D  L   L+    +   +DEA 
Sbjct: 260 LQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAW 319

Query: 241 ELQNEMMGRGLL 252
           E+  E+   GL+
Sbjct: 320 EIFGELEEDGLV 331



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 97/205 (47%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           I   L   Y  AG   +++  L  M   R  +T   +  LID   K+G  ++A+  +  M
Sbjct: 56  IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVM 115

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              GL P+   +  L++   K   ++    LF+EM  ++  P+   Y+ LID   K    
Sbjct: 116 GQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGV 175

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           ++AL +   M   G   ++  YTS++ GL + GH+ +A  LF EM   G++   ++  SL
Sbjct: 176 EKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSL 235

Query: 227 LKKHYERGNMDEAIELQNEMMGRGL 251
           +      G  D A +L  EM+ +GL
Sbjct: 236 IHGLGRSGRADAAAKLFREMLSKGL 260



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 101/219 (46%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  EM+    + N +  + L+DA  K G   +AL +  +M        + T+  +IDGL 
Sbjct: 146 LFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLG 205

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KSG V +A   F  M   GL     VY +LI GL +    + A  LF EM  + + PD  
Sbjct: 206 KSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHV 265

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            +T+L+ G        EA  +     +VG  LD+N Y  L+  L +   L EA  +F E+
Sbjct: 266 TFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGEL 325

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
              G++PD     +L+    + G + +A  L  +M   G
Sbjct: 326 EEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAG 364



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 5/195 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ LY  +I  LC   + +++  +  E++E+GL  +      LMD   K+G   +A  LL
Sbjct: 298 DVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILL 357

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M  +     V  +  LIDGL KSG V EA      M   G  P+V  Y  LID  CK 
Sbjct: 358 GDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKG 417

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV----DLD 184
             IE A  LF+E+  +    +T  Y  +++G        EA  L N M +  V    D D
Sbjct: 418 GRIEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPD 476

Query: 185 LNAYTSLVWGLSRCG 199
              YT+L+ G  + G
Sbjct: 477 FVTYTTLLNGARQAG 491



 Score = 43.1 bits (100), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 5/99 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    + D+  Y T+I   C   + ED+  L  E+   G  ANTV   T+++    AG 
Sbjct: 395 MQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGR 453

Query: 61  PSEALSLLD----EMLDSRIEVTVVTFCVLIDGLCKSGL 95
             EA  L +    E +D  I+   VT+  L++G  ++GL
Sbjct: 454 VDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGL 492


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 1/236 (0%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  LC + +F+D       M E G   N V  T  +D   K     +A  +L+EM+   
Sbjct: 222 VVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG 281

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYTALIDGLCKKNCIERA 134
           ++  V T   LIDGLCK G    A   F ++       PNV  YT +I G C++  + RA
Sbjct: 282 LKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA 341

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L   M ++ + P+T  YT LI G+ K  SF  A  L N+M + G   ++  Y +++ G
Sbjct: 342 EMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG 401

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             + G +QEA  +      +G+  D+I    L+ +H ++G++  A++L + M+  G
Sbjct: 402 FCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 457



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 117/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K  + K ++  Y  +I G C E K   +++LL  M E GL  NT   TTL+  + K G 
Sbjct: 313 IKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGS 372

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+++M        + T+  +IDG CK G ++EA          GL  +   YT 
Sbjct: 373 FDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTI 432

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   CK+  I  A +LFD M +    PD  AYT+LI  Y +    +E+    ++   +G
Sbjct: 433 LITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIG 492

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTS++ G  + G    A  +F  M+  G   D I   +L+    +   ++EA 
Sbjct: 493 LLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAK 552

Query: 241 ELQNEMMGRGLL 252
            L   M+ + L+
Sbjct: 553 ALYEGMLDKRLV 564



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 125/249 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K +   Y T+I G C    F+ +  L+++MK+ G   N      ++D + K G+
Sbjct: 348 MVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGK 407

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L       ++   +T+ +LI   CK G +  A+D F RM + G  P++  YT+
Sbjct: 408 IQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTS 467

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C++  +E ++  FD+     ++P    YT++I GY K      AL +  RM + G
Sbjct: 468 LISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNG 527

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +L+ GL +   L+EA+ L+  M+ + ++P E+  ++L  ++  R     A+
Sbjct: 528 CFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAV 587

Query: 241 ELQNEMMGR 249
            + + +  R
Sbjct: 588 SVLDRLDKR 596



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 114/241 (47%), Gaps = 1/241 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y   I GLC     + +  +L EM   GL  N    TTL+D   K G    A  L  +++
Sbjct: 254 YTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLI 313

Query: 73  -DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
             S  +  V T+ V+I G C+ G +  A     RM + GL PN   YT LI G CK    
Sbjct: 314 KSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSF 373

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +RA  L ++M +   +P+   Y A+IDG+ K    +EA  +    T  G+  D   YT L
Sbjct: 374 DRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 433

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    + GH+  A  LF  M+  G  PD     SL+  + ++  M+E+ +  ++ +  GL
Sbjct: 434 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 493

Query: 252 L 252
           L
Sbjct: 494 L 494



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 1/232 (0%)

Query: 21  CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           C E K E+   LL+ M   G + +   CT ++ +  + G   +       ML++     V
Sbjct: 192 CREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNV 251

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           V +   IDGLCK   V++A      M   GL PNV  +T LIDGLCK    ERA  LF +
Sbjct: 252 VNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLK 311

Query: 141 MPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           + K     P+   YT +I GY +      A  L  RM E G+  + N YT+L+ G  + G
Sbjct: 312 LIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGG 371

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               A  L ++M   G LP+     +++    ++G + EA ++      +GL
Sbjct: 372 SFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGL 423



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M G+ +K ++  + T+I GLC     E + +L L  +K +    N    T ++  Y + G
Sbjct: 277 MVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREG 336

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           + + A  LL  M++  ++    T+  LI G CK G    A +   +M   G  PN+  Y 
Sbjct: 337 KLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYN 396

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+IDG CKK  I+ A  +      + +  D   YT LI  + K      AL+L +RM E 
Sbjct: 397 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN 456

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+ AYTSL+    +   ++E++  F + +  G+LP +    S++  + + G    A
Sbjct: 457 GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLA 516

Query: 240 IELQNEMMGRGLLSGS 255
           + +   M+  G  + S
Sbjct: 517 LRVFERMVQNGCFADS 532



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 109/286 (38%), Gaps = 40/286 (13%)

Query: 7   KADLPLYGTIIWGLCIE----SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           +  LP+   ++ G+        +  ++  ++ EM+ +GL         ++    + G   
Sbjct: 104 RGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFV 163

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A  + D M  + +     +F  L+   C+ G V E       M  +G   + A  T ++
Sbjct: 164 YARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVV 223

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
             LC+K   +     F  M +    P+   YTA IDG  K    K+A ++   M   G+ 
Sbjct: 224 RSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLK 283

Query: 183 LDLNAYTSLV-------W-----------------------------GLSRCGHLQEARV 206
            ++  +T+L+       W                             G  R G L  A +
Sbjct: 284 PNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEM 343

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           L   M+ +G+ P+     +L+  H + G+ D A EL N+M   G L
Sbjct: 344 LLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL 389



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 60/139 (43%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I   C + + E+S+    +    GL       T+++  Y K G  + AL + 
Sbjct: 461 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVF 520

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M+ +      +T+  LI GLCK   + EA   +  M D  L P       L    C++
Sbjct: 521 ERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRR 580

Query: 129 NCIERARNLFDEMPKRDMI 147
                A ++ D + KR  +
Sbjct: 581 EKTSIAVSVLDRLDKRQQV 599


>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 418

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 112/219 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L S M  +G+  +    + L++   K  +  EA  L DEMLD  +    VTF  LIDG C
Sbjct: 193 LKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G +  A++ + +M   G  P+   Y  LI GLCKK  + +A++L DEM  + + PD  
Sbjct: 253 KNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  +YT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G+ PD      ++ +  + G++    +L  EM   G
Sbjct: 373 LSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDG 411



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 113/213 (53%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           E+ E    A+      LMD + K GE   A S+ D +    +  +VV+F  L++G  K G
Sbjct: 126 EILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            + E       M   G+ P+V  Y+ LI+GLCK++ ++ A  LFDEM  R ++P+   +T
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFT 245

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LIDG+ K+     A+ +  +M   G   D   Y +L++GL + G L +A+ L  EM  +
Sbjct: 246 TLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMK 305

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKRMI 338



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 106/218 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK +++  L  EM + GL  N V  TTL+D + K G+
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGK 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML        +T+  LI GLCK G + +A D    M   GL P+   YT 
Sbjct: 257 LDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  +YTALI G  K     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           +  D   YT ++    + G ++    L  EM   G +P
Sbjct: 377 LKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVP 414



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 106/209 (50%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       +++  V   T   +++ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + +     ++  +  L+D  CK+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   GV  D+  Y+ L+ GL +   + EA  LF EM+ RG++P+ + 
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ +G 
Sbjct: 244 FTTLIDGHCKNGKLDLAMEIYKQMLSQGF 272


>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
          Length = 332

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  ++  Y +II  LC     + +  +L+ M ++G+  + +   +++  +  +G+
Sbjct: 38  MLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 97

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L+D LCK+G   EA   F  M   GL P++  Y  
Sbjct: 98  PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 157

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + P+   ++ L+  Y K E  +EA+ + ++M + G
Sbjct: 158 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 217

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +++  L + G +++A + F +MI  G+ PD I+  SL+         ++A 
Sbjct: 218 LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE 277

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 278 ELFLEMLDRGI 288



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 96/185 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K D+  YGT++ G   +    +   LL  M  NG+  N  + + L+ AY K  +
Sbjct: 143 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 202

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  +M    +    VT+  +ID LCKSG V +A+ YF +M D GL P+  VY +
Sbjct: 203 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 262

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC  +  E+A  LF EM  R +   T  + ++ID + K     E++ L + M  +G
Sbjct: 263 LIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIG 322

Query: 181 VDLDL 185
           V  D+
Sbjct: 323 VKPDI 327



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 103/221 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y +++  LC   +  +++ +   M + GL  +     TL+  Y   G 
Sbjct: 108 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGA 167

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD M+ + I      F +L+    K   V EA+  F +M   GL+PN   Y  
Sbjct: 168 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 227

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   +E A   F++M    + PD+  Y +LI      + +++A  L   M + G
Sbjct: 228 VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 287

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           + L    + S++    + G + E+  LF  M+  G+ PD I
Sbjct: 288 ICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDII 328



 Score = 43.5 bits (101), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 47/83 (56%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D  +Y ++I  LCI  K+E ++ L  EM + G+  +T+   +++D++ K G 
Sbjct: 248 MIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 307

Query: 61  PSEALSLLDEMLDSRIEVTVVTF 83
             E++ L D M+   ++  ++T 
Sbjct: 308 VIESVKLFDLMVRIGVKPDIITL 330


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 124/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I+ D+  +  ++ GLC   K +++  L  E K+NG   N      ++D Y KA +
Sbjct: 562 MVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANK 621

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E  +LL+E++  ++E+  V +  LI   C +G +  A      M   G+  + A Y++
Sbjct: 622 VEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSS 681

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    ++ A++L DEM K  ++P+   YT +I GY K     +   +   M+   
Sbjct: 682 LMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHN 741

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT ++ G  + G  +EA  L +EM  +GILPD +   +      + G ++EA 
Sbjct: 742 IHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAF 801

Query: 241 ELQNEM 246
           ++ +EM
Sbjct: 802 KVCDEM 807



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +   L  Y   I GL    K +++  +L EM E G   N V+  TL+D Y K G 
Sbjct: 317 MVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGN 376

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEAL + D+ML   I    VT   LI G CKS  + +A +    M   GL  N   ++ 
Sbjct: 377 ISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSM 436

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LC K     A +   EM  R++ P+    T L+ G  K     EA+ L  R+   G
Sbjct: 437 VINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG 496

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++    +L+ GL + G++QE   L  +M+ RG++ D I   +L+    + G + E  
Sbjct: 497 FVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGF 556

Query: 241 ELQNEMMGRGL 251
           EL+ EM+ +G+
Sbjct: 557 ELKEEMVKKGI 567



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 120/244 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           GK    ++     +I GLC     +++  LL +M E GL  + +   TL+    K G+  
Sbjct: 494 GKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVK 553

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           E   L +EM+   I+  + TF +L+ GLC +  + EA   +      G  PNV  Y  +I
Sbjct: 554 EGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMI 613

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG CK N +E   NL +E+  + +  ++  Y +LI  Y  + +   A  L++ M   GV 
Sbjct: 614 DGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVL 673

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           L    Y+SL+ GL   G + +A+ L  EM   G+LP+ +   +++  + + G M++   +
Sbjct: 674 LSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIV 733

Query: 243 QNEM 246
             EM
Sbjct: 734 LQEM 737



 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 108/215 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I G C  +K E+ + LL+E+    L  N+V+  +L+ AY   G  + A  L D+M 
Sbjct: 609 YGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMK 668

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              + ++  T+  L+ GLC  GLV +A      M   GL PNV  YT +I G  K   + 
Sbjct: 669 SRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMN 728

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +   +  EM   ++ P+   YT +IDG+ K    KEA  L N MTE G+  D   Y +  
Sbjct: 729 KVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFT 788

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
            GL + G ++EA  +  EM    +  DEI   +L+
Sbjct: 789 NGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 117/249 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N++ +  L  T++ GLC   K  ++  L   +   G   N V    L+    KAG   E
Sbjct: 460 RNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQE 519

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            L LL +ML+  +    +T+  LI G CK G V+E  +    M   G+ P++  +  L+ 
Sbjct: 520 TLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLH 579

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC  + I+ A  L+ E  K   +P+   Y  +IDGY K    +E  NL N +    ++L
Sbjct: 580 GLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLEL 639

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           +   Y SL+      G++  A  L  +M  RG+L       SL+      G +D+A  L 
Sbjct: 640 NSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLL 699

Query: 244 NEMMGRGLL 252
           +EM   GLL
Sbjct: 700 DEMRKEGLL 708



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 35/282 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+ L+ T+I   C   + +D+  L S+M++ G+  N V    ++    K+G   EA 
Sbjct: 252 IIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAY 311

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              ++M+  ++  +++T+ V I+GL K   + EA      M + G  PN  VY  LIDG 
Sbjct: 312 RFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGY 371

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   I  A  + D+M  + + P++    +LI G+ K +   +A N+   M   G+ ++ 
Sbjct: 372 CKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQ 431

Query: 186 NAY-----------------------------------TSLVWGLSRCGHLQEARVLFHE 210
            ++                                   T+LV GL + G   EA  L+  
Sbjct: 432 GSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCR 491

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           ++G+G +P+ +   +L+    + GNM E ++L  +M+ RGL+
Sbjct: 492 LLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLV 533



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 109/220 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           + S + + GL  +   CT L+ +  KA E  ++  + D +    I   V  F  +I+  C
Sbjct: 208 VFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFC 267

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K     +AI  F +M   G+ PNV  Y  +I GLCK   ++ A    ++M K  + P   
Sbjct: 268 KGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLI 327

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y+  I+G +K E   EA  +   M+E+G   +   Y +L+ G  + G++ EA  +  +M
Sbjct: 328 TYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDM 387

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + +GI P+ +   SL++   +   + +A  +  EM+GRGL
Sbjct: 388 LSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGL 427



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 123/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ +  +   +  +I  LC++ +F  +   + EM    L  N  + TTL+    KAG+
Sbjct: 422 MIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGK 481

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L   +L       +VT   LI GLCK+G ++E +     M + GL  +   Y  
Sbjct: 482 QGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNT 541

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK+  ++    L +EM K+ + PD   +  L+ G    +   EA  L +   + G
Sbjct: 542 LISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNG 601

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  Y  ++ G  +   ++E   L +E++ + +  + ++  SL++ +   GNM+ A 
Sbjct: 602 YVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAF 661

Query: 241 ELQNEMMGRGLL 252
            L+++M  RG+L
Sbjct: 662 RLRDDMKSRGVL 673



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 82/159 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +      Y +++ GLC     +D+K LL EM++ GL  N V  TT++  Y K G+
Sbjct: 667 MKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQ 726

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++   +L EM    I     T+ ++IDG CK G  +EA      M + G+ P+   Y A
Sbjct: 727 MNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNA 786

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
             +GLCK+  +E A  + DEM    +  D   YT LIDG
Sbjct: 787 FTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 109/240 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C E K ++   L  EM + G+  +      L+     A +  EA  L  E  
Sbjct: 539 YNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK 598

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            +     V T+ V+IDG CK+  V E  +    +    L  N  VY +LI   C    + 
Sbjct: 599 KNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMN 658

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L D+M  R ++     Y++L+ G        +A +L + M + G+  ++  YT+++
Sbjct: 659 AAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTII 718

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G S+ G + +  ++  EM    I P++     ++    + G   EA +L NEM  +G+L
Sbjct: 719 GGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGIL 778



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 91/174 (52%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           T   L+  L K+  ++++ + +  +   G+ P+V +++ +I+  CK +  + A  LF +M
Sbjct: 223 TCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKM 282

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            K  + P+   Y  +I G  K     EA   K +M +  V   L  Y+  + GL +   +
Sbjct: 283 EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKI 342

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            EA  +  EM   G +P+E++  +L+  + + GN+ EA++++++M+ +G+   S
Sbjct: 343 DEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNS 396


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 1/241 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFED-SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           K D+  Y  +I G C     +  S  L  E   NG T +    T ++D   K  +  EA+
Sbjct: 228 KPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAV 287

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L++++  +    T+ T+  L++GLCK G + EAID   ++ D G  P+V  YT+LIDGL
Sbjct: 288 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 347

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K+     A  LF EM  R +  DT  YTALI   L+     +A ++   MT  G   D+
Sbjct: 348 GKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDV 407

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
              ++++ GLS+ G +  A  +F  M  RG+ P+E++  +L+    +   MD A+E+  +
Sbjct: 408 VTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 467

Query: 246 M 246
           M
Sbjct: 468 M 468



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 36/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  +  +Y  +I GLC   K + +  +L++MK+   T +T+    L+D   K+G+
Sbjct: 152 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGD 211

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG-------------------------- 94
              A +  DEML++  +  V T+ +LI G CK+G                          
Sbjct: 212 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYT 271

Query: 95  ----------LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
                      + EA+    ++   G  P +A Y AL++GLCK   +E A +L  ++   
Sbjct: 272 AIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 331

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PD   YT+LIDG  K +   EA  L   M   G+ LD   YT+L+  L + G + +A
Sbjct: 332 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 391

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             ++  M   G +PD +   +++    + G +  A+ +   M  RGL
Sbjct: 392 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 438



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 103/184 (55%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA++L++++  +    T+ T+  L++GLCK G + EAID   ++ D G  P+V  YT+LI
Sbjct: 4   EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 63

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DGL K+     A  LF EM  R +  DT  YTALI   L+     +A ++   MT  G  
Sbjct: 64  DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+   ++++ GLS+ G +  A  +F  M  RG+ P+E++  +L+    +   MD A+E+
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183

Query: 243 QNEM 246
             +M
Sbjct: 184 LAQM 187



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 110/237 (46%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           +  Y  ++ GLC   + E++  LL ++ +NG T + V  T+L+D   K     EA  L  
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM    + +  V +  LI  L ++G + +A   +  M   G  P+V   + +IDGL K  
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I  A  +F  M  R + P+   Y+ALI G  K      AL +  +M +     D   Y 
Sbjct: 422 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 481

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            L+ GL + G ++ AR  F EM+  G  PD      L+    + GN D A  + ++M
Sbjct: 482 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 538



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 106/230 (46%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           +  Y  ++ GLC   + E++  LL ++ +NG T + V  T+L+D   K     EA  L  
Sbjct: 21  IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 80

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM    + +  V +  LI  L ++G + +A   +  M   G  P+V   + +IDGL K  
Sbjct: 81  EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 140

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I  A  +F  M  R + P+   Y+ALI G  K      AL +  +M +     D   Y 
Sbjct: 141 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 200

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            L+ GL + G ++ AR  F EM+  G  PD      L+    + GN D A
Sbjct: 201 VLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 250



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 97/203 (47%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I GL  E +  ++  L  EM   GL  +TV  T L+    + G+  +A S+ 
Sbjct: 336 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 395

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M        VVT   +IDGL K+G +  A+  F  M   GL PN  VY+ALI GLCK 
Sbjct: 396 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 455

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  +  +M K    PDT  Y  LIDG  K    + A    + M E G   D+  Y
Sbjct: 456 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 515

Query: 189 TSLVWGLSRCGHLQEARVLFHEM 211
             L+ G  + G+   A  +F +M
Sbjct: 516 NILISGFCKAGNTDAACGVFDDM 538



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 122/278 (43%), Gaps = 36/278 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I GL  E +  ++  L  EM   GL  +TV  T L+    + G+  +A S+ 
Sbjct: 55  DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 114

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI------ 122
             M        VVT   +IDGL K+G +  A+  F  M   GL PN  VY+ALI      
Sbjct: 115 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 174

Query: 123 -----------------------------DGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
                                        DGLCK   +E AR  FDEM +    PD   Y
Sbjct: 175 RKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 234

Query: 154 TALIDGYLKHESFKEAL-NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
             LI G+ K  +   A  +L    T  G  +D++ YT++V  L++   ++EA  L  ++ 
Sbjct: 235 NILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKIT 294

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             G  P      +LL    + G ++EAI+L  +++  G
Sbjct: 295 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 332



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 77/156 (49%)

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + EA+    ++   G  P +A Y AL++GLCK   +E A +L  ++      PD   YT+
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LIDG  K +   EA  L   M   G+ LD   YT+L+  L + G + +A  ++  M   G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +PD +   +++    + G +  A+ +   M  RGL
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 157



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 74/144 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  +  +Y  +I GLC   K + +  +L++MK+   T +T+    L+D   K+G+
Sbjct: 433 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 492

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +  DEML++  +  V T+ +LI G CK+G    A   F  M       NV  Y A
Sbjct: 493 VEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGA 552

Query: 121 LIDGLCKKNCIERARNLFDEMPKR 144
           LI GLCK+  + +A   F  M +R
Sbjct: 553 LISGLCKRRQLTKASLYFQHMKER 576



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 48/110 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      D   Y  +I GLC     E ++    EM E G   +      L+  + KAG 
Sbjct: 468 MKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 527

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
              A  + D+M  SR    VVT+  LI GLCK   + +A  YF  M + G
Sbjct: 528 TDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 124/241 (51%)

Query: 9    DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
            D+  + T+I GLC E     ++  L E     L  N +  T L+  +   GE   A  LL
Sbjct: 1286 DIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLL 1345

Query: 69   DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             EM+       VVTF  LI GL  +G V EA+    +M +  + P+V +Y  LI GLCKK
Sbjct: 1346 VEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKK 1405

Query: 129  NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              +  A+N+ +EM ++++ PD   Y  LIDG+++ E+  +A  +   M   G+  D+ + 
Sbjct: 1406 RMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSC 1465

Query: 189  TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             +++ G  + G + EA +    M   G +PDE    +++  + ++GN++ A+    +M+ 
Sbjct: 1466 NAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIK 1525

Query: 249  R 249
            R
Sbjct: 1526 R 1526



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 123/251 (49%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+ K     L  YG++I  L  +   E    L  EM++ G + N  I  +++DA  K   
Sbjct: 1208 METKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRS 1267

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             ++A+ +L +M  S  +  ++TF  LI GLC  G VR+A  +        L+PN   YT 
Sbjct: 1268 ATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTP 1327

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            LI G C +  +  A +L  EM  R   PD   + ALI G +      EAL ++ +MTE  
Sbjct: 1328 LIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ 1387

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            V  D+N Y  L+ GL +   L  A+ +  EM+ + + PDE +  +L+       N+ +A 
Sbjct: 1388 VFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDAR 1447

Query: 241  ELQNEMMGRGL 251
            ++   M  +G+
Sbjct: 1448 KIFEFMEHKGI 1458



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 115/239 (48%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y  +I G C+  +   +  LL EM   G T + V    L+     AG+ SEAL + ++M 
Sbjct: 1325 YTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT 1384

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + ++   V  + VLI GLCK  ++  A +    M +  + P+  VY  LIDG  +   + 
Sbjct: 1385 ERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLG 1444

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             AR +F+ M  + + PD  +  A+I GY +     EA+   + M +VG   D   YT+++
Sbjct: 1445 DARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVI 1504

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             G ++ G+L  A     +MI R   P+ +   SL+  + + G+ D A  L   M    L
Sbjct: 1505 SGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEAL 1563



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 109/228 (47%)

Query: 23   ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
            + +++D++ L  EM      A+      L+          E L L++    +     VV 
Sbjct: 1125 QRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVF 1184

Query: 83   FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
            + VLIDG C+ G +   +   G M   G  P +  Y +LI+ L KK  +E+  +LF EM 
Sbjct: 1185 YNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMR 1244

Query: 143  KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
            KR   P+   Y ++ID   K  S  +A+ +  +M   G D D+  + +L+ GL   GH++
Sbjct: 1245 KRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVR 1304

Query: 203  EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +A     E I R + P+++    L+     RG +  A +L  EMMGRG
Sbjct: 1305 KAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRG 1352



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 112/252 (44%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M GK+  AD      ++ GLC+E + E+   L+      G   + V    L+D Y + G+
Sbjct: 1138 MLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGD 1197

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                L LL EM       T+VT+  LI+ L K G + +    F  M   G  PNV +Y +
Sbjct: 1198 MGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNS 1257

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +ID LCK     +A  +  +M      PD   +  LI G       ++A +         
Sbjct: 1258 VIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE 1317

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            ++ +  +YT L+ G    G L  A  L  EM+GRG  PD +   +L+      G + EA+
Sbjct: 1318 LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEAL 1377

Query: 241  ELQNEMMGRGLL 252
             ++ +M  R + 
Sbjct: 1378 IVREKMTERQVF 1389



 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 4/233 (1%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M G+    D+  +G +I GL +  K  ++ ++  +M E  +  +  I   L+    K   
Sbjct: 1348 MMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRM 1407

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               A ++L+EML+  ++     +  LIDG  +S  + +A   F  M   G+ P++    A
Sbjct: 1408 LPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNA 1467

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +I G C+   +  A      M K   IPD   YT +I GY K  +   AL     M +  
Sbjct: 1468 MIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRK 1527

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKK 229
               ++  Y+SL+ G  + G    A  LF  M    + P+     IL  SL KK
Sbjct: 1528 CKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKK 1580



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 17/243 (6%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+ K I  D+     +I G C      ++ L +S M++ G   +    TT++  Y K G 
Sbjct: 1453 MEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 1512

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + AL  L +M+  + +  VVT+  LI+G CK+G    A   F  M    L PNV  YT 
Sbjct: 1513 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTI 1572

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK----------------HE 164
            LI  L KK+ + RA   F+ M      P+      L++G                   H 
Sbjct: 1573 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 1632

Query: 165  SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
                 +  K  + ++G D   +AY ++++ L R   L+EA    + M  +G +P+ I  +
Sbjct: 1633 KDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 1691

Query: 225  SLL 227
            SLL
Sbjct: 1692 SLL 1694



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 100/221 (45%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  + +  D+ +Y  +I GLC +     +K +L EM E  +  +  +  TL+D + ++  
Sbjct: 1383 MTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSEN 1442

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              +A  + + M    I   +V+   +I G C+ G++ EAI     M   G  P+   YT 
Sbjct: 1443 LGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTT 1502

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +I G  K+  +  A     +M KR   P+   Y++LI+GY K      A  L   M    
Sbjct: 1503 VISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEA 1562

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
            +  ++  YT L+  L +   +  A + F  M+     P+++
Sbjct: 1563 LSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDV 1603



 Score = 44.3 bits (103), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 1/168 (0%)

Query: 85   VLIDGLCKSGLVREAIDYFGRMPD-FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             L+     +G++ +A     R+ + +G  P V     L+  L ++   + AR L+DEM  
Sbjct: 1081 ALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLG 1140

Query: 144  RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
            +D   D  +   L+ G       +E L L       G    +  Y  L+ G  R G +  
Sbjct: 1141 KDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGR 1200

Query: 204  ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              +L  EM  +G LP  +   SL+    ++G++++   L  EM  RG 
Sbjct: 1201 GLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGF 1248


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 115/219 (52%), Gaps = 8/219 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I A++  Y  II G CI  K  ++   L+EM    +  +  I  TL+DA  K G+
Sbjct: 229 MSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGK 288

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L  ++ + ++  V+T+  LIDG  K          F  +   G+ P+V  Y  
Sbjct: 289 VKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKH--------VFNAVGLMGVTPDVWSYNI 340

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LCK   +E A NL+ EM +++M+P+T  Y +LIDG  K      A +L + M + G
Sbjct: 341 MINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRG 400

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              ++  Y SL+ GL + G L +A  L ++M  +GI PD
Sbjct: 401 HHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPD 439



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 128/277 (46%), Gaps = 28/277 (10%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA----- 58
           K I  D+ +Y T++  L  E K +++K +L+ + +  L  N +   TL+D Y K      
Sbjct: 267 KAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAV 326

Query: 59  ----------------------GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV 96
                                     EAL+L  EM    +    VT+  LIDGLCKSG +
Sbjct: 327 GLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRI 386

Query: 97  REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
             A D    M D G H NV  Y +LI+GLCK   +++A  L ++M  + + PD      L
Sbjct: 387 SYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNIL 446

Query: 157 IDGYL-KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           + G L K +  K A  L   + + G   ++  Y  +++G  + G L EA  L  +M   G
Sbjct: 447 LHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSG 506

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             P+ I    ++    E+G  D+A +L  EM+ RGLL
Sbjct: 507 CSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 124/276 (44%), Gaps = 27/276 (9%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            +  + D   YGT+I G+C   +   +  LL  +       N V+  T++D   K    S
Sbjct: 161 AQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVS 220

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA +L  EM    I   VVT+  +I G C  G + EA+ +   M    ++P+V +Y  L+
Sbjct: 221 EACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLV 280

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH------------------- 163
           D L K+  ++ A+N+   + K  + P+   Y  LIDGY KH                   
Sbjct: 281 DALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNI 340

Query: 164 --------ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
                   +  +EALNL   M +  +  +   Y SL+ GL + G +  A  L  EM  RG
Sbjct: 341 MINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRG 400

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              + I   SL+    + G +D+AI L N+M  +G+
Sbjct: 401 HHANVITYNSLINGLCKNGQLDKAIALINKMKDQGI 436



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 106/218 (48%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ D      +I   C   +   +  +LS++ + G   +TV  TTL+      G+  +
Sbjct: 92  KAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKK 151

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL   D++L     +  V++  LI+G+CK G  R AI    R+      PNV +Y  +ID
Sbjct: 152 ALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIID 211

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK+  +  A NLF EM  + +  +   Y+A+I G+       EAL   N M    ++ 
Sbjct: 212 CLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINP 271

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           D+  Y +LV  L + G ++EA+ +   ++   + P+ I
Sbjct: 272 DVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVI 309



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 92/189 (48%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L++ +   G+ + A S+L ++L    +   VT   LI GLC  G V++A+ +  ++   G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
              +   Y  LI+G+CK      A  L   +  R   P+   Y  +ID   K +   EA 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           NL + M+  G+  ++  Y++++ G    G L EA    +EM+ + I PD  +  +L+   
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 231 YERGNMDEA 239
           ++ G + EA
Sbjct: 284 HKEGKVKEA 292



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 1/158 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+  +   Y ++I GLC   +   +  L+ EM + G  AN +   +L++   K G+
Sbjct: 361 MHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQ 420

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDG-LCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             +A++L+++M D  I+  + T  +L+ G LCK   ++ A   F  + D G HPNV  Y 
Sbjct: 421 LDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYN 480

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
            +I G CK+  ++ A  L  +M      P+   +  +I
Sbjct: 481 IIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIII 518



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 92/201 (45%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           ++D++ K       +SL   +    I+    T  +LI+  C  G +  A     ++  +G
Sbjct: 69  ILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWG 128

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+    T LI GLC K  +++A +  D++  +    D  +Y  LI+G  K    + A+
Sbjct: 129 YQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAI 188

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L  R+     + ++  Y +++  L +   + EA  LF EM  +GI  + +   +++   
Sbjct: 189 QLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGF 248

Query: 231 YERGNMDEAIELQNEMMGRGL 251
              G + EA+   NEM+ + +
Sbjct: 249 CIVGKLTEALGFLNEMVLKAI 269


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   Y +++  LC     + ++  L +M   G+  N      L+  Y   G+
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQ 304

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM    I   VVTF +L+  LCK G ++EA D F  M   G +P+V  Y  
Sbjct: 305 WKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G   K C+    +LFD M    + P    +  LI  Y       +A+ + N M + G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  YT+++  L R G + +A   F++MI +G+ PD+     L++     G++ +A 
Sbjct: 425 VKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 484

Query: 241 ELQNEMMGRGL 251
           EL +E+M  G+
Sbjct: 485 ELISEIMNNGM 495



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 121/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K ++  Y T+I  LC   K +D+    ++M + G+  +      L+  +   G 
Sbjct: 420 MRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ E++++ + + +V F  +I+ LCK G V +A + F    + GLHP   VY+ 
Sbjct: 480 LLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C    +E+A  +FD M    + P+   Y  L++GY K     E L+L   M + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y  ++ GL   G    A+V FHEM   GI  ++     +L+  ++    DEAI
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 659

Query: 241 ELQNEM 246
            L  E+
Sbjct: 660 FLFKEL 665



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ ++I  D+  +  ++  LC   K ++++ +   M   G   +      +++ Y   G 
Sbjct: 315 MRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 374

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L D ML   I   + TF VLI      G++ +A+  F  M D G+ PNV  YT 
Sbjct: 375 LVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTT 434

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LC+   ++ A   F++M  + + PD  AY  LI G+  H S  +A  L + +   G
Sbjct: 435 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 494

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD+  ++S++  L + G + +A+ +F   +  G+ P  ++   L+  +   G M++A+
Sbjct: 495 MHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKAL 554

Query: 241 ELQNEMMGRGL 251
            + + M+  G+
Sbjct: 555 RVFDAMVSAGI 565



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 123/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  +I G C       +K L+SE+  NG+  + V+ +++++   K G 
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGR 514

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A ++ D  ++  +  T V + +L+DG C  G + +A+  F  M   G+ PN  VY  
Sbjct: 515 VMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGT 574

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK   I+   +LF EM ++ + P T  Y  +IDG  +      A    + MTE G
Sbjct: 575 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + ++   Y+ ++ GL +     EA  LF E+    +  D I   +++   ++   ++EA 
Sbjct: 635 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 694

Query: 241 ELQNEMMGRGLL 252
           +L   +   GL+
Sbjct: 695 DLFASISRSGLV 706



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 121/249 (48%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G     D+  Y T+I G   E     +  L  EM + G+  + V  ++++ A  KA    
Sbjct: 212 GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A + L +M++  +     T+  LI G   +G  +EA+  F  M    + P+V  +  L+
Sbjct: 272 KAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
             LCK   I+ AR++FD M  +   PD  +Y  +++GY       +  +L + M   G+ 
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
             +  +  L+   + CG L +A ++F+EM   G+ P+ +   +++      G MD+A+E 
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451

Query: 243 QNEMMGRGL 251
            N+M+ +G+
Sbjct: 452 FNQMIDQGV 460



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 127/253 (50%), Gaps = 6/253 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICT--TLMDAYFKA 58
           MKG+N   D+  Y  ++ G   +    D   L   M  +G+    VICT   L+ AY   
Sbjct: 352 MKGQN--PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP--VICTFNVLIKAYANC 407

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
           G   +A+ + +EM D  ++  V+T+  +I  LC+ G + +A++ F +M D G+ P+   Y
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
             LI G C    + +A+ L  E+    M  D   ++++I+   K     +A N+ +    
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
           VG+      Y+ L+ G    G +++A  +F  M+  GI P++++  +L+  + + G +DE
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587

Query: 239 AIELQNEMMGRGL 251
            + L  EM+ +G+
Sbjct: 588 GLSLFREMLQKGI 600



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I   +  +  +I         + + ++ +EM+++G+  N +  TT++ A  + G+
Sbjct: 385 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGK 444

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+   ++M+D  +      +  LI G C  G + +A +    + + G+H ++ ++++
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSS 504

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LCK   +  A+N+FD      + P    Y+ L+DGY      ++AL + + M   G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +LV G  + G + E   LF EM+ +GI P  IL   ++   +E G    A 
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624

Query: 241 ELQNEMMGRGL 251
              +EM   G+
Sbjct: 625 VKFHEMTESGI 635



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 119/242 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ L+ +II  LC   +  D++ +       GL    V+ + LMD Y   G+  +AL + 
Sbjct: 498 DIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+ + IE   V +  L++G CK G + E +  F  M   G+ P+  +Y  +IDGL + 
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A+  F EM +  +  +   Y+ ++ G  K+  F EA+ L   +  + V +D+   
Sbjct: 618 GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITL 677

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ G+ +   ++EA+ LF  +   G++P  +    ++    + G ++EA ++ + M  
Sbjct: 678 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737

Query: 249 RG 250
            G
Sbjct: 738 AG 739



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 3/205 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-GRMPDF 109
           LMD   +A  P  AL+   ++L + + V ++    L+ G C++    EA+D    R P+ 
Sbjct: 117 LMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPEL 176

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFK 167
           G  P+V  Y+ L+  LC +    +A +L   M +   +  PD  AY  +IDG+ K     
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVN 236

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A +L   M + G+  D   Y+S+V  L +   + +A     +M+ +G+LP+     +L+
Sbjct: 237 KACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLI 296

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
             +   G   EA+ +  EM  + +L
Sbjct: 297 YGYSSTGQWKEAVRVFKEMRRQSIL 321



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 101/211 (47%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  ++ G C+  K E +  +   M   G+  N V+  TL++ Y K G   E LSL  EM
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L   I+ + + + ++IDGL ++G    A   F  M + G+  N   Y+ ++ GL K  C 
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCF 655

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A  LF E+   ++  D      +I G  +    +EA +L   ++  G+   +  Y+ +
Sbjct: 656 DEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIM 715

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           +  L + G ++EA  +F  M   G  PD  L
Sbjct: 716 ITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 746



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 3/222 (1%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS-LLDEMLDSRIEVTVVTFCVLIDGL 90
              ++   GL  + +I   L+  + +A    EAL  LL    +      V ++ +L+  L
Sbjct: 133 FFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 192

Query: 91  CKSGLVREAIDYFGRMPDFGL--HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           C  G   +A D    M + G    P+V  Y  +IDG  K+  + +A +LF EM +R + P
Sbjct: 193 CDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D   Y++++    K  +  +A     +M   GV  +   Y +L++G S  G  +EA  +F
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            EM  + ILPD +    L+    + G + EA ++ + M  +G
Sbjct: 313 KEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKG 354



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 89/184 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ +  +YGT++ G C   + ++   L  EM + G+  +T++   ++D  F+AG 
Sbjct: 560 MVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM +S I +   T+ +++ GL K+    EAI  F  +    +  ++     
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 679

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G+ +   +E A++LF  + +  ++P    Y+ +I   +K    +EA ++ + M   G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 181 VDLD 184
            + D
Sbjct: 740 CEPD 743



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 3/174 (1%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN-LFDE 140
           T+ +L+D   ++     A+ +FG++   GL  ++ +   L+ G C+    + A + L   
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHR 172

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV--DLDLNAYTSLVWGLSRC 198
            P+   +PD  +Y+ L+          +A +L   M E G     D+ AY +++ G  + 
Sbjct: 173 TPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKE 232

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G + +A  LF EM+ RGI PD +   S++    +   MD+A     +M+ +G+L
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 109/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  +I GLC ESK +D   L  EM + GL  N V  TTL+D + K G 
Sbjct: 201 MQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGR 260

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   +VT+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 261 VDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 320

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 321 LIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 380

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G +P  +
Sbjct: 381 LKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVV 421



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 128/280 (45%), Gaps = 35/280 (12%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL-- 65
           A L  +  ++   C E +   ++ +   + + GL  + V   TLM+ Y K G+ +E    
Sbjct: 138 ASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRL 197

Query: 66  ---------------------------------SLLDEMLDSRIEVTVVTFCVLIDGLCK 92
                                             L DEMLD  +    VTF  LIDG CK
Sbjct: 198 KKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCK 257

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           +G V  A++ + +M    L P++  Y  LI GLCKK  +++A++L DEM  + + PD   
Sbjct: 258 NGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 317

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM+
Sbjct: 318 YTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 377

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             G+ P+      ++ +  ++G++    +L  EM   G +
Sbjct: 378 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYV 417



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 119/235 (50%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM ++ K GE   A S+ D + 
Sbjct: 120 YFKLVWGFYEESL------------ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAIT 167

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 168 KWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMD 227

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
               LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 228 DXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLI 287

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A+ L  EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 288 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMI 342



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 75/159 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +++  DL  Y T+I+GLC +   + ++ L+ EM   GL  + +  TTL+D   K G+
Sbjct: 271 MLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD 330

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A      M+   I +  V +  LI GLC+ G   +A      M   GL P +  YT 
Sbjct: 331 LETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTM 390

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +I+  CKK  +     L  EM +   +P    Y  L++G
Sbjct: 391 IINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMNG 429



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 101/209 (48%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + ++ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 68  SDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGF 127

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+   CK+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 128 YEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIK 187

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK  M   GV  D+  Y+ L+ GL +   + +   LF EM+  G++P+ + 
Sbjct: 188 LGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVT 247

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 248 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 276



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 111/246 (45%), Gaps = 2/246 (0%)

Query: 7   KADLPLYGTIIWGLCIESKF-EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++D+ ++  II    +ES F  D+       KE+        C  +++   K        
Sbjct: 67  RSDIYVFSGIITAY-LESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVW 125

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
              +E L+     ++  F +L+   CK G +R A   F  +  +GL P+V  +  L++G 
Sbjct: 126 GFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGY 185

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +     L   M    + PD   Y+ LI+G  K     +   L + M + G+  + 
Sbjct: 186 IKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNG 245

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +T+L+ G  + G +  A  ++ +M+ + + PD +   +L+    ++G++ +A +L +E
Sbjct: 246 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDE 305

Query: 246 MMGRGL 251
           M  +GL
Sbjct: 306 MSMKGL 311


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 122/247 (49%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+  ++ ++ + I  LC +     +  +  +M E GL  +    TT+M  Y K  + S A
Sbjct: 318 NLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNA 377

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L  L +ML   I  +V T+ +LID  CK G +  A   F RM   GL P+V  Y  L++G
Sbjct: 378 LKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNG 437

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             KK  +++A  L   M    + PD   Y  LI G +K     EA ++ + +T  G   D
Sbjct: 438 YGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPD 497

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  +T+++ G S  G+ +EA +LF  M    + PD + C +LL  +     M EA  L +
Sbjct: 498 VVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFH 557

Query: 245 EMMGRGL 251
           +M+  GL
Sbjct: 558 KMLDAGL 564



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 119/255 (46%), Gaps = 4/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+  +  Y  +I   C     E ++ L   M   GL  + V   TLM+ Y K G 
Sbjct: 384 MLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGH 443

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  LL  M  + +   +VT+ +LI GL K GLV EA D    +   G  P+V  +T 
Sbjct: 444 LQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTN 503

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G   K   E A  LF  M +  + PD    +AL++GY +     EA  L ++M + G
Sbjct: 504 IIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAG 563

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI----LCISLLKKHYERGNM 236
           +  D+  Y SL+ G    G++ +A  L   MI  GI+P+ I    L +   KK  E    
Sbjct: 564 LKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKKCVENPVE 623

Query: 237 DEAIELQNEMMGRGL 251
             A +LQ  ++  G+
Sbjct: 624 RAAFKLQQLLLKYGI 638



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 3/251 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + +  +  +    I G C +   +    LL EMK  G+  + V  T ++D+  K   
Sbjct: 212 MKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSL 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S+L +M    + +  V+   ++DG CK G   EA+D    +  F L PN+ V+ +
Sbjct: 272 LKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDV---LEVFNLSPNIFVFNS 328

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I  LC    + +A  +F +M +  +IPD  +YT ++ GY K +    AL    +M + G
Sbjct: 329 FISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRG 388

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  YT L+    + G+++ A  LF  MI  G++PD +   +L+  + ++G++ +A 
Sbjct: 389 IRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAF 448

Query: 241 ELQNEMMGRGL 251
           EL + M   G+
Sbjct: 449 ELLSMMRSAGV 459



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 3/221 (1%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
            L EMK  GL  N  I +  +  Y   G       LL EM    I+  VV + ++ID LC
Sbjct: 208 FLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLC 267

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K  L++EA     +M   G+  +    ++++DG CK   + ++    D +   ++ P+  
Sbjct: 268 KMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCK---VGKSEEAMDVLEVFNLSPNIF 324

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            + + I       +  +A  +   M E+G+  D  +YT+++ G  +   +  A     +M
Sbjct: 325 VFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKM 384

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           + RGI P       L+    + GNM+ A  L   M+  GL+
Sbjct: 385 LKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLV 425



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/240 (20%), Positives = 116/240 (48%), Gaps = 3/240 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +YG ++     E+  + +  L+ +M+   +     +C +L+ A  ++ + + A   L EM
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               + +      + I G C  G +         M   G+ P+V  YT +ID LCK + +
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A ++  +M +  +  D+ + ++++DGY K    +EA+++   +    +  ++  + S 
Sbjct: 273 KEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDV---LEVFNLSPNIFVFNSF 329

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  L   G++ +A  +F +M   G++PD     +++  + +  ++  A++   +M+ RG+
Sbjct: 330 ISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGI 389



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 3/202 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L++ Y K      AL L+ +M    I   +     L+  L +S  +  A D+   M   G
Sbjct: 157 LVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQG 216

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           L  N ++ +  I G C +  I+    L  EM    + PD  AYT +ID   K    KEA 
Sbjct: 217 LGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEAT 276

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           ++  +MT++GV LD  + +S+V G  + G  +EA  +        + P+  +  S + K 
Sbjct: 277 SILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSFISKL 333

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
              GNM +A ++  +M   GL+
Sbjct: 334 CTDGNMLKAAKVFQDMCEMGLI 355



 Score = 45.8 bits (107), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 33/169 (19%), Positives = 75/169 (44%)

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
           ++  V    + +L++   K  + + A+    +M    + P + V  +L+  L +   +  
Sbjct: 145 TKRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNL 204

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A +   EM  + +  + +  +  I GY    +      L   M  +G+  D+ AYT ++ 
Sbjct: 205 AWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVID 264

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            L +   L+EA  +  +M   G+  D +   S++  + + G  +EA+++
Sbjct: 265 SLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDV 313


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 130/281 (46%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D   Y T+I GLC   + +++  +L +M   G   + V  T L++A  K     +A+
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG- 124
            LLDEM D      +VT+ V+++G+C+ G V +A+++   +P +G  PN   Y  ++ G 
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267

Query: 125 ----------------------------------LCKKNCIERARNLFDEMPKRDMIPDT 150
                                             LC++  +E A  + D++PK    P++
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNS 327

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            +Y  ++  + K +    A+     M   G   D+ +Y +L+  L R G +  A  L H+
Sbjct: 328 LSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  +G  P  I   +++    + G  +EA+EL NEM+ +GL
Sbjct: 388 LKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGL 428



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 115/241 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    D+  Y  ++ G+C E + +D+   L  +   G   NTV    ++     A  
Sbjct: 213 MRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAER 272

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EM        VVTF +LI  LC+ GLV  A++   ++P +G  PN   Y  
Sbjct: 273 WEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNP 332

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++   CK+  ++RA    + M      PD  +Y  L+    +      A+ L +++ + G
Sbjct: 333 ILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 392

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
               L +Y +++ GL++ G  +EA  L +EM+ +G+ PD I   ++       G ++EAI
Sbjct: 393 CTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAI 452

Query: 241 E 241
           +
Sbjct: 453 K 453



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 93/173 (53%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T++  LC   + + +  LL ++K+ G T   +   T++D   KAG+  EAL LL
Sbjct: 361 DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELL 420

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM+   ++  ++T+  +  GLC+ G + EAI  F ++ D G+ PN  +Y A++ GLCK+
Sbjct: 421 NEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKR 480

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
                A +LF  M     +P+ + YT LI+G       KEA  +   +   GV
Sbjct: 481 RATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 114/240 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC   ++ED++ L++EM   G   N V    L+    + G    A+ +LD++ 
Sbjct: 260 YNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIP 319

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   +++  ++   CK   +  A+ +   M   G +P++  Y  L+  LC+   ++
Sbjct: 320 KYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVD 379

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  ++  +   P   +Y  +IDG  K    +EAL L N M   G+  D+  Y+++ 
Sbjct: 380 AAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTIS 439

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL R G ++EA   F ++   GI P+ +L  ++L    +R     AI+L   M+  G +
Sbjct: 440 SGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCM 499



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+   C + K + +   +  M  +G   + V   TL+ A  + GE   A+ LL ++ 
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D      ++++  +IDGL K+G   EA++    M   GL P++  Y+ +  GLC++  IE
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIE 449

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F ++    + P+T  Y A++ G  K  +   A++L   M   G   + + YT L+
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILI 509

Query: 193 WGLSRCGHLQEARVLFHEMIGRGIL 217
            GL+  G ++EAR +  E+  RG++
Sbjct: 510 EGLAYEGLVKEAREMMAELCSRGVV 534



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 121/253 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  +  +I  LC     E +  +L ++ + G T N++    ++ A+ K  +
Sbjct: 283 MSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKK 342

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A++ ++ M+ S     +V++  L+  LC+ G V  A++   ++ D G  P +  Y  
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGL K    E A  L +EM  + + PD   Y+ +  G  +    +EA+    ++ ++G
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +++ GL +      A  LF  M+  G +P+E     L++     G + EA 
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAR 522

Query: 241 ELQNEMMGRGLLS 253
           E+  E+  RG++S
Sbjct: 523 EMMAELCSRGVVS 535



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 8/242 (3%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
             +I  LC   +  +++ +L+  + + ++ N ++       Y   G+   A  L+  M  
Sbjct: 94  AALIKKLCASGRTAEARRVLASCEPDVMSYNAMVA-----GYCVTGQLDNARRLVAAM-- 146

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             +E    T+  LI GLC  G    A+     M   G  P+V  YT L++  CK++  ++
Sbjct: 147 -PMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 205

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A  L DEM  +   PD   Y  +++G  +     +A+     +   G + +  +Y  ++ 
Sbjct: 206 AVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLK 265

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
           GL      ++A  L  EM  +G  P+ +    L+     RG ++ A+E+ +++   G   
Sbjct: 266 GLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTP 325

Query: 254 GS 255
            S
Sbjct: 326 NS 327


>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
 gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
 gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
 gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 125/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K D   Y T++  L    +F     LL EM  +G   NTV    L+ +Y +A   +EA+
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           ++ ++M ++  +   VT+C LID   K+G +  A+D + RM   GL P+   Y+ +I+ L
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +  A  LF EM  +   P+   Y  ++D + K  +++ AL L   M   G + D 
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+ ++  L  CG+L+EA  +F EM  +  +PDE +   L+    + GN+++A +    
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 600 MLHAGL 605



 Score = 73.6 bits (179), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 2/220 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAG 59
           M+    K D   Y T+I  +  ++ F D  + +   M+  GL+ +T   + +++   KAG
Sbjct: 425 MQEAGCKPDRVTYCTLI-DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
               A  L  EM+D      +VT+ +++D   K+   + A+  +  M + G  P+   Y+
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYS 543

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +++ L     +E A  +F EM +++ IPD   Y  L+D + K  + ++A      M   
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           G+  ++    SL+    R   + EA  L   M+  G+ P 
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 80/192 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D   Y  II  L        +  L  EM + G T N V    +MD + KA  
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L  +M ++  E   VT+ ++++ L   G + EA   F  M      P+  VY  
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D   K   +E+A   +  M    + P+     +L+  +L+     EA  L   M  +G
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639

Query: 181 VDLDLNAYTSLV 192
           +   L  YT L+
Sbjct: 640 LRPSLQTYTLLL 651


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 124/242 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ GLC   ++E+++ LL+EM +     + V    L+D + + G 
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL++ML+      V+T+  +I+G CK GLV EA+     M   G  PN   YT 
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC+      A+ L   M ++  +P+   +  LI+   K    ++A+ L  +M   G
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL +Y++++ GL + G  +EA  L + MI +GI P+ I+  S+       G  D+ I
Sbjct: 464 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII 523

Query: 241 EL 242
           ++
Sbjct: 524 QM 525



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       DL +Y TII G+C +   E +  +LS M   GL  N V   T++     A  
Sbjct: 249 MPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAER 308

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM      +  VTF +L+D  C++GLV   I+   +M + G  P+V  YT 
Sbjct: 309 WEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTT 368

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK+  ++ A  L   M      P+T +YT ++ G  + E + +A  L + M + G
Sbjct: 369 VINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG 428

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + +L+  + + G  ++A  L  +M+  G  PD I   +++    + G  +EA+
Sbjct: 429 CLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 488

Query: 241 ELQNEMMGRGL 251
           EL N M+ +G+
Sbjct: 489 ELLNVMINKGI 499



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 117/282 (41%), Gaps = 66/282 (23%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y  ++ GLC+  +++D + L+ EM                          EALS
Sbjct: 210 EPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRV----------------------HEALS 247

Query: 67  LLDE---MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
            + E     D R+  T+      IDG+CK G    A D   RMP +GL PNV  Y  ++ 
Sbjct: 248 QMPEHGCTPDLRMYATI------IDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLK 301

Query: 124 GLCKKNCIERARNLFDEMPKRD-----------------------------------MIP 148
           GLC     E A +L  EM + D                                    IP
Sbjct: 302 GLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP 361

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D   YT +I+G+ K     EA+ L   M+  G   +  +YT ++ GL R     +A+ L 
Sbjct: 362 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 421

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             MI +G LP+ +   +L+    ++G  ++AIEL  +M+  G
Sbjct: 422 SHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 111/241 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NT+  T ++    +A    +A  L+
Sbjct: 362 DVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELI 421

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M+        VTF  LI+ +CK GL  +AI+   +M   G  P++  Y+ +IDGL K 
Sbjct: 422 SHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 481

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              E A  L + M  + + P+T  Y+++     +     + + + + + +  V  D   Y
Sbjct: 482 GKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALY 541

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L +      A   F  M+  G +P+E     L++     G + EA +L +E+  
Sbjct: 542 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCS 601

Query: 249 R 249
           R
Sbjct: 602 R 602



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 10/250 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+  LC      D+  +L EM   G  A   +C  +++A  + G    A+  L  + 
Sbjct: 111 YFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLH 170

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC---KKN 129
                +      +++  +C+ G V E ++   ++P FG  P++  Y A++ GLC   + +
Sbjct: 171 AKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWD 230

Query: 130 CIE-------RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            +E       R      +MP+    PD   Y  +IDG  K    + A ++ +RM   G+ 
Sbjct: 231 DVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLK 290

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +++ GL      +EA  L  EM       D++    L+    + G +D  IEL
Sbjct: 291 PNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIEL 350

Query: 243 QNEMMGRGLL 252
             +M+  G +
Sbjct: 351 LEQMLEHGCI 360



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 113/260 (43%), Gaps = 10/260 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +   A  P+   I+   C    F  +   L  +   G T ++  C  ++ A  + G 
Sbjct: 134 MPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGC 193

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG-------LVREAI---DYFGRMPDFG 110
             E + LL ++     E  +V++  ++ GLC +        L+ E +   +   +MP+ G
Sbjct: 194 VDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHG 253

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P++ +Y  +IDG+CK    E A ++   MP   + P+   Y  ++ G    E ++EA 
Sbjct: 254 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 313

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
           +L   M +    LD   +  LV    + G +     L  +M+  G +PD I   +++   
Sbjct: 314 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 373

Query: 231 YERGNMDEAIELQNEMMGRG 250
            + G +DEA+ L   M   G
Sbjct: 374 CKEGLVDEAVMLLKNMSACG 393



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 6/199 (3%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           + L+ +   AG  ++A   LD   D+     VV +  +I G C++G V  A      +P 
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDA---AGVVAYNAMIAGYCRAGQVAAARRLAAAVP- 103

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
             + PN   Y  ++  LC +  I  A  + DEMP R           +++   +   F+ 
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A+     +   G  LD      +V  +   G + E   L  ++   G  PD +   ++LK
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 229 KHYERGNMDEAIELQNEMM 247
                   D+  EL  EM+
Sbjct: 222 GLCMAKRWDDVEELMVEMV 240


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 116/236 (49%), Gaps = 2/236 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           Y T+I G C   + + +  ++ EM+E G +  +     TL+  + K G   +A+ + DEM
Sbjct: 150 YNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEM 209

Query: 72  L-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           L    +  + V +  LI G C  G +  A+ Y   M   G+   VA Y  L+  L     
Sbjct: 210 LTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDAR 269

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
              A  + +EM K    PD   Y  LI+GY K  + K+AL +   M++ GV      YTS
Sbjct: 270 ASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTS 329

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L++  SR G +QE   LF+  + +GI PD ++  +L+  H   G+M+ A E+  EM
Sbjct: 330 LIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEM 385



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 116/240 (48%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I G C   K + +     +M + G+         LM A F     S+A ++L+EM
Sbjct: 221 MYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEM 280

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
             +     V T+ +LI+G CK G  ++A++ F  M   G+      YT+LI    +K  +
Sbjct: 281 QKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQV 340

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +    LF+   K+ + PD   Y ALI+ +      + A  +   M +  +  D   Y +L
Sbjct: 341 QETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTL 400

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G    G L EAR L  EM  RGI PD +   +L+  +  +G++ +A+ +++EMM +G 
Sbjct: 401 MRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGF 460



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I   +  Y  ++  L ++++  D+  +L EM++NG + +      L++ Y K G 
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGN 304

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + +EM    +  T VT+  LI    + G V+E    F      G+ P+V +Y A
Sbjct: 305 EKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNA 364

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  C    +ERA  +  EM K+ + PD   Y  L+ G+       EA  L + MT+ G
Sbjct: 365 LINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRG 424

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  DL +Y +L+ G S  G +++A  +  EM+ +G  P  +   +L++   +    D+A 
Sbjct: 425 IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAE 484

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G+
Sbjct: 485 NLMKEMVAKGI 495



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 81/156 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I+ D+ +Y  +I   C     E +  +++EM++  +  + +   TLM  +   G   E
Sbjct: 353 KGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE 412

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A +L+DEM    I+  +V++  LI G    G +++A+     M D G +P +  Y ALI 
Sbjct: 413 ARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQ 472

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           GLCK    + A NL  EM  + + PD + Y +LI+G
Sbjct: 473 GLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEG 508



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 90/196 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++A    Y ++I+    + + +++  L +   + G+  + V+   L++++   G+
Sbjct: 315 MSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGD 374

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  ++ EM   RI    +T+  L+ G C  G + EA      M   G+ P++  Y  
Sbjct: 375 MERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNT 434

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G   K  I+ A  + DEM  +   P    Y ALI G  K     +A NL   M   G
Sbjct: 435 LISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKG 494

Query: 181 VDLDLNAYTSLVWGLS 196
           +  D + Y SL+ GL+
Sbjct: 495 ITPDDSTYISLIEGLT 510



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 41/227 (18%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           + A +L  ++   R+ +   TF +++  LC +G    A++   +MP     PN   Y  +
Sbjct: 98  APAFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTV 153

Query: 122 IDGLCKKNCI------------------------------------ERARNLFDEM-PKR 144
           I G C +  +                                    E A  +FDEM  K 
Sbjct: 154 IAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKG 213

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
           ++ P    Y ALI GY        AL  +  M + G+ + +  Y  L+  L       +A
Sbjct: 214 EVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDA 273

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +  EM   G  PD      L+  + + GN  +A+E+  EM  +G+
Sbjct: 274 YAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGV 320


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 131/259 (50%), Gaps = 16/259 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC+E +  ++  L   M++ G T + V   TL+      G  + AL L  EML
Sbjct: 142 YNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEML 201

Query: 73  D--SRIEVT----VVTFCVLIDGLCKSGLVREAIDYF------GRMP----DFGLHPNVA 116
           +  SR E+     V+T+ +++DGLCK G   EA   F      G +P    D GL P++ 
Sbjct: 202 NDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMV 261

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
            +  LID LCK+  +  A+ L   M +  ++PD   Y +LI+G+        A  L   M
Sbjct: 262 TFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM 321

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              G + D+ +Y  L+ G S+   ++EA  L++EM+  G  P+ I   SLLK  +  G +
Sbjct: 322 PSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKV 381

Query: 237 DEAIELQNEMMGRGLLSGS 255
           D+A +L + M   G+   S
Sbjct: 382 DDAKKLFSVMKAHGIAENS 400



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 107/224 (47%), Gaps = 16/224 (7%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEM------KENGLTANTVICTTLMDAYFKAGEPS 62
           D+  YGT+I GLC       +  L  EM       E     N +    ++D   K G   
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRED 232

Query: 63  EALSLL----------DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH 112
           EA  L           +EMLD  ++  +VTF VLID LCK G V EA    G M + G+ 
Sbjct: 233 EAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV 292

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P++  Y +LI+G C    +  AR LF  MP +   PD  +Y  LI+GY K    +EA+ L
Sbjct: 293 PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKL 352

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
            N M  VG   ++  Y SL+ G+   G + +A+ LF  M   GI
Sbjct: 353 YNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 396



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 114/244 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  DL  Y ++I G C+      ++ L   M   G   + +    L++ Y K  +  EA+
Sbjct: 291 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 350

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +EML       V+T+  L+ G+  +G V +A   F  M   G+  N   Y   +DGL
Sbjct: 351 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 410

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK +C+  A  LF E+   +   +      LIDG  K    + A  L  +++  G + ++
Sbjct: 411 CKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV 470

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             YT ++ G  R G + +A VL  +M   G  PD I   +L++  YE   ++E ++L + 
Sbjct: 471 VTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHR 530

Query: 246 MMGR 249
           M  +
Sbjct: 531 MAQK 534



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 113/266 (42%), Gaps = 16/266 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   + +D      ++  LC  ++  +     + +   G + N V   TL+        
Sbjct: 95  MRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHR 154

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDFGLHPN 114
            SEA  L   M        VVT+  LI GLC +G +  A+     M       +    PN
Sbjct: 155 ISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPN 214

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMI----------PDTTAYTALIDGYLKHE 164
           V  Y  ++DGLCK    + A+ LF+EM  + MI          PD   +  LID   K  
Sbjct: 215 VITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEG 274

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
              EA  L   M E G+  DL  Y SL+ G    G L  AR LF  M  +G  PD I   
Sbjct: 275 KVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYN 334

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRG 250
            L+  + +   ++EA++L NEM+  G
Sbjct: 335 VLINGYSKTLKVEEAMKLYNEMLLVG 360



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 98/197 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  Y +++ G+ +  K +D+K L S MK +G+  N+      +D   K     EA+ 
Sbjct: 362 RPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 421

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L  E+  S  ++ +     LIDGLCK+G +  A + F ++ + G  PNV  YT +I G C
Sbjct: 422 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 481

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           ++  +++A  L  +M      PD   Y  L+ G+ +    +E + L +RM +  V  D  
Sbjct: 482 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 541

Query: 187 AYTSLVWGLSRCGHLQE 203
             + +V  LS+    QE
Sbjct: 542 TCSIVVDMLSKDEKYQE 558



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 98/223 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + D+  Y  +I G     K E++  L +EM   G   N +   +L+   F AG+
Sbjct: 321 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L   M    I     T+ + +DGLCK+  + EA+  F  +        +     
Sbjct: 381 VDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  LF+++      P+   YT +I G+ +     +A  L  +M   G
Sbjct: 441 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
              D+  Y +L+ G      L+E   L H M  + + PD I C
Sbjct: 501 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITC 543



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 119/291 (40%), Gaps = 45/291 (15%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTAN----------TVICTTLMDA 54
           N K ++  Y  I+ GLC   + +++K L  EMK  G+  N           V    L+D 
Sbjct: 210 NCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDT 269

Query: 55  YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
             K G+  EA  LL  M++S I   +VT+  LI+G C  G +  A + F  MP  G  P+
Sbjct: 270 LCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPD 329

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL------------------ 156
           V  Y  LI+G  K   +E A  L++EM      P+   Y +L                  
Sbjct: 330 VISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFS 389

Query: 157 -----------------IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
                            +DG  K++   EA+ L   +      L++     L+ GL + G
Sbjct: 390 VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAG 449

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            L+ A  LF ++   G  P+ +    ++      G +D+A  L  +M   G
Sbjct: 450 KLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 6/178 (3%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+    K    S+  SL ++M  S +     T  +L++ LC    +RE    F  +   G
Sbjct: 75  LLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRG 134

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PN+  Y  LI GLC ++ I  A  LF  M K    PD   Y  LI G     +   AL
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIAL 194

Query: 171 NLKNRM------TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
            L   M       E+    ++  Y  +V GL + G   EA+ LF EM  +G++P+E+L
Sbjct: 195 KLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEML 252



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 1/186 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  +   YG  + GLC      ++  L +E+K +           L+D   KAG+
Sbjct: 391 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 450

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L +++ +   E  VVT+ ++I G C+ G V +A     +M   G  P++  Y  
Sbjct: 451 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 510

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT-EV 179
           L+ G  + N +E    L   M ++D+ PD    + ++D   K E ++E L+L  R   + 
Sbjct: 511 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 570

Query: 180 GVDLDL 185
           GVD  L
Sbjct: 571 GVDKHL 576



 Score = 47.4 bits (111), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 2/159 (1%)

Query: 91  CKSGLVR--EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           CK+G V    A+ +F  M      P+++ +  L+ GL K     +  +L+++M    +  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D      L++        +E       +   G   ++  Y +L+ GL     + EA  LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             M   G  PD +   +L+K     GN++ A++L  EM+
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEML 201


>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 903

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 121/241 (50%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           ++I G  +    E    +L  M E G++ N V  T+L+ +Y K G   EA  + + + + 
Sbjct: 266 SLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEK 325

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
           ++        VLIDG C++G + +A+     M + G+  N  +  +LI+G CK   +  A
Sbjct: 326 KLVPDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEA 385

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             +   M    + PD   Y  L+DGY +     EAL L  RM +  V   +  Y  L+ G
Sbjct: 386 EQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKG 445

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
            SR G   +   L+  M+ RG+  +EI C +LL+  ++ G+ DEA++L   ++ RGLL+ 
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTD 505

Query: 255 S 255
           +
Sbjct: 506 T 506



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 129/261 (49%), Gaps = 8/261 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++ + +   +  YG +I G C     + +     EM E G+T N  IC+ + ++ F+  +
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDK 661

Query: 61  PSEALSLLDEMLDSRIEV----TVVTFCVLIDGLC-KSGLVREAIDYFGRMPDFGLHPNV 115
             EA  LL +++D  + +    ++  F       C K+  + E+++     P   L PN 
Sbjct: 662 FDEACLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVE--NSTPKKLLVPNN 719

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKN 174
            VY   I GLCK   +  A+ LF ++   D  IPD   YT LI G        +A NL++
Sbjct: 720 IVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRD 779

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M   G+  ++  Y +L+ GL + G++  A+ L  ++  +G  P+ I   +L+    + G
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSG 839

Query: 235 NMDEAIELQNEMMGRGLLSGS 255
           ++ EA+ L+ +M+ +GL+ GS
Sbjct: 840 DVAEAMRLKEKMIEKGLVRGS 860



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 109/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++  + ++I   C +   E+++ +   + E  L  +  +   L+D Y + G 
Sbjct: 287 MSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGR 346

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + D M++  +         LI+G CKSG + EA     RM D+ L P+   Y  
Sbjct: 347 ICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNT 406

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C+   ++ A  L   M +++++P    Y  L+ GY +  +F + L+L   M + G
Sbjct: 407 LVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           V  +  + ++L+  L + G   EA  L+  ++ RG+L D I
Sbjct: 467 VTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTI 507



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 116/249 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  D  ++G +I G C   +  D+  +   M E G+  NT IC +L++ Y K+G+  E
Sbjct: 325 KKLVPDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVE 384

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +L  M D  ++    T+  L+DG C++G V EA+   GRM    + P V  Y  L+ 
Sbjct: 385 AEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLK 444

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G  +        +L+  M KR +  +  + + L++   K   F EA+ L   +   G+  
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLT 504

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D      ++ GL +   + EA+ +   +      PD     +L   +Y  GN+ EA  ++
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVK 564

Query: 244 NEMMGRGLL 252
           + M  +G+ 
Sbjct: 565 DFMEKKGIF 573



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 113/252 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +   +  Y  ++ G      F D   L   M + G+TAN + C+TL++A FK G+
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGD 486

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L + +L   +    +T  V+I GLCK   V EA +    +  F   P+V  Y A
Sbjct: 487 FDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQA 546

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L  G      ++ A  + D M K+ + P    Y  LI G  K++   +  +L   +   G
Sbjct: 547 LSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARG 606

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +L+ G    G + +A     EMI +GI  +  +C  +    +     DEA 
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEAC 666

Query: 241 ELQNEMMGRGLL 252
            L  +++   LL
Sbjct: 667 LLLQKIVDFDLL 678



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 114/246 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ +  +  ++I G C   +  +++ +L+ M +  L  +     TL+D Y +AG   EAL
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEAL 421

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L   M    +  TV+T+ +L+ G  + G   + +  +  M   G+  N    + L++ L
Sbjct: 422 KLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEAL 481

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K    + A  L++ +  R ++ DT     +I G  K E   EA  + + +       D+
Sbjct: 482 FKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDV 541

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L  G    G+L+EA  +   M  +GI P   +  +L+   ++  ++++  +L  E
Sbjct: 542 QTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIE 601

Query: 246 MMGRGL 251
           +  RGL
Sbjct: 602 LRARGL 607



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 108/251 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   ++K D   Y T++ G C     +++  L   M +  +    +    L+  Y + G 
Sbjct: 392 MNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGA 451

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + LSL   ML   +    ++   L++ L K G   EA+  +  +   GL  +      
Sbjct: 452 FHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNV 511

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK   +  A+ + D +      PD   Y AL  GY    + KEA  +K+ M + G
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKG 571

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +L+ G  +  HL +   L  E+  RG+ P      +L+      G +D+A 
Sbjct: 572 IFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631

Query: 241 ELQNEMMGRGL 251
               EM+ +G+
Sbjct: 632 ATCFEMIEKGI 642



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 79/159 (49%), Gaps = 1/159 (0%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
            F +++    + G+V+ A+  F  M  +G  P++    +L+  L KK     A +++D+M
Sbjct: 157 VFDMILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALHVYDQM 216

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEVGVDLDLNAYTSLVWGLSRCGH 200
              ++ PD    + +++ Y +     +A+     M   +G++L++    SL+ G +  G 
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGD 276

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           ++    +   M  RG+  + +   SL+K + ++G M+EA
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEA 315


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K ++  YGT++ G   +    +   LL  M  NG+  +  + + L+ AY   G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGK 386

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  +M    +    VT+  +I  LCKSG V +A+ YF +M D GL P   VY +
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLC  N  ERA  L  EM  R +  +T  + ++ID + K     E+  L   M  +G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y +L+ G    G + EA  L   M+  G+ P+ +   +L+  + +   M++A+
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 567 VLFKEMESSGV 577



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y +II  LC     + +  +L+ M +NG+  + +   +++  Y  +G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+ +L+D LCK+G   EA   F  M   GL P +  Y  
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + PD   ++ LI  Y       +A+ + ++M + G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQG 401

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +++  L + G +++A + F +MI  G+ P  I+  SL+         + A 
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 462 ELILEMLDRGI 472



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 106/200 (53%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y ++I GLC  +K+E ++ L+ EM + G+  NT+   +++D++ K G   E+  L + M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++  V+T+  LI+G C +G + EA+     M   GL PN   Y+ LI+G CK + +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  LF EM    + PD   Y  ++ G  +      A  L  R+TE G  ++L+ Y  +
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622

Query: 192 VWGLSRCGHLQEARVLFHEM 211
           + GL +     +A  +F  +
Sbjct: 623 LHGLCKNKLTDDALQMFQNL 642



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 126/254 (49%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G     D+  Y T+I G   E   + +     EM + G+  + V   +++ A  KA   
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +A+ +L+ M+ + +    +T+  ++ G C SG  +EAI +  +M   G+ P+V  Y+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +D LCK      AR +FD M KR + P+ T Y  L+ GY    +  E   L + M   G+
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D   ++ L+   +  G + +A ++F +M  +G+ P+ +   +++    + G +++A+ 
Sbjct: 368 HPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427

Query: 242 LQNEMMGRGLLSGS 255
              +M+  GL  G+
Sbjct: 428 YFEQMIDEGLSPGN 441



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 4/252 (1%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           K  + D   +  ++ GLC + +  D+  ++L  M E G   N      L+          
Sbjct: 116 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQ 175

Query: 63  EALSLLDEMLDSR---IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           EAL LL  M D R       VV++  +I+G  K G   +A   +  M D G+ P+V  Y 
Sbjct: 176 EALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYN 235

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           ++I  LCK   +++A  + + M K  ++PD   Y +++ GY      KEA+    +M   
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD 295

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV+ D+  Y+ L+  L + G   EAR +F  M  RG+ P+     +LL+ +  +G + E 
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 355

Query: 240 IELQNEMMGRGL 251
             L + M+  G+
Sbjct: 356 HGLLDLMVRNGI 367



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 100/215 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  +   YG +I  LC   + ED+ L   +M + GL+   ++  +L+       +
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+ EMLD  I +  + F  +ID  CK G V E+   F  M   G+ PNV  Y  
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C    ++ A  L   M    + P+T  Y+ LI+GY K    ++AL L   M   G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           V  D+  Y  ++ GL +      A+ L+  +   G
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y  ++  LC   +  +++ +   M + GL        TL+  Y   G 
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD M+ + I      F +LI      G V +A+  F +M   GL+PN   Y A
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK   +E A   F++M    + P    Y +LI G      ++ A  L   M + G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   + S++    + G + E+  LF  M+  G+ P+ I   +L+  +   G MDEA+
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 241 ELQNEMMGRGL 251
           +L + M+  GL
Sbjct: 532 KLLSGMVSVGL 542



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 110/234 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K ++  Y T+I G C+  K +++  LLS M   GL  NTV  +TL++ Y K     +AL
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM  S +   ++T+ +++ GL ++     A + + R+ + G    ++ Y  ++ GL
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK    + A  +F  +   D+  +   +  +ID  LK     EA +L    +  G+  + 
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 686

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y  +   +   G L+E   LF  M   G   D  +   ++++  +RG +  A
Sbjct: 687 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 99/208 (47%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            + +II   C E +  +S+ L   M   G+  N +   TL++ Y  AG+  EA+ LL  M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++   VT+  LI+G CK   + +A+  F  M   G+ P++  Y  ++ GL +    
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A+ L+  + +     + + Y  ++ G  K++   +AL +   +  + + L+   +  +
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM 657

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  L + G   EA+ LF      G++P+
Sbjct: 658 IDALLKVGRNDEAKDLFVAFSSNGLVPN 685



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 4/199 (2%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID-YFGRMPDFGLHPNV 115
           +AG      + L  ++     V  + F  L+ GLC      +A+D    RM + G  PNV
Sbjct: 99  RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKR---DMIPDTTAYTALIDGYLKHESFKEALNL 172
             Y  L+ GLC +N  + A  L   M         PD  +YT +I+G+ K     +A + 
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            + M + G+  D+  Y S++  L +   + +A  + + M+  G++PD +   S+L  +  
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278

Query: 233 RGNMDEAIELQNEMMGRGL 251
            G   EAI    +M   G+
Sbjct: 279 SGQPKEAIGFLKKMRSDGV 297



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 91/204 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K +   Y T+I G C  S+ ED+ +L  EM+ +G++ + +    ++   F+   
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L   + +S  ++ + T+ +++ GLCK+ L  +A+  F  +    L      +  
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID L K    + A++LF       ++P+   Y  + +  +     +E   L   M + G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
             +D      +V  L + G +  A
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRA 740


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 122/240 (50%), Gaps = 2/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YGTII GL  + +  D   +L+ M+E G   N  + + L+   FK G+  EA+ L  EM 
Sbjct: 312 YGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMT 371

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E+  + +  +IDGLC+ G   EA++    M +    PN   Y++L+ G  +     
Sbjct: 372 VKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGH 431

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  ++ +M K +   +   Y+ LI G  K    KEA+ +  +M   G   D+ AY S++
Sbjct: 432 KAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMI 491

Query: 193 WGLSRCGHLQEARVLFHEMIGR--GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GLS  G +++A  L++EM+ +     PD +    LL    ++ ++  AI+L N M+ RG
Sbjct: 492 NGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRG 551



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 117/245 (47%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KG NI  ++  +  +I  +C     +D+  +  +M  +    +     TLMD   KA   
Sbjct: 161 KGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRI 220

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA+SLLDEM       + VTF VLI+GLCK G +         M   G  PN   Y  L
Sbjct: 221 DEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTL 280

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I GLC K  +E+A +L D M     +P+   Y  +I+G +K     +   +   M E G 
Sbjct: 281 IHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGY 340

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            ++   Y++L+ GL + G  QEA  LF EM  +    + I+  +++      G  DEA+E
Sbjct: 341 HVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALE 400

Query: 242 LQNEM 246
           + +EM
Sbjct: 401 VLSEM 405



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 117/235 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC++ K E +  LL  M  +    N V   T+++   K G   +   +L  M 
Sbjct: 277 YNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALME 336

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +    V    +  LI GL K G  +EA+  F  M       N  VY+A+IDGLC+    +
Sbjct: 337 ERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPD 396

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +  EM      P+   Y++L+ G+ +  +  +A+ +   M +     +   Y+ L+
Sbjct: 397 EALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLI 456

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            GL + G ++EA +++ +M+G+G  PD +   S++      G +++A++L NEM+
Sbjct: 457 HGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEML 511



 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 113/240 (47%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  Y T++ GLC   + +++  LL EM+ +G   + V    L++   K G+ +    
Sbjct: 201 QPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAK 260

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           L+D M         VT+  LI GLC  G + +AI    RM      PNV  Y  +I+GL 
Sbjct: 261 LVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLV 320

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+        +   M +R    +   Y+ALI G  K    +EA+ L   MT    +L+  
Sbjct: 321 KQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTI 380

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y++++ GL R G   EA  +  EM      P+     SL+K  +E GN  +AIE+  +M
Sbjct: 381 VYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDM 440



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 2/176 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I GLC + K +++  +LSEM  N    N    ++LM  +F+AG   +A+ +  +M
Sbjct: 381 VYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDM 440

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
                    V + VLI GLCK G V+EA+  + +M   G  P+V  Y ++I+GL     +
Sbjct: 441 AKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLV 500

Query: 132 ERARNLFDEM--PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           E A  L++EM   + D  PD   Y  L++   K  S   A++L N M + G D DL
Sbjct: 501 EDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDL 556



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 114/238 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  +I GLC +        L+  M   G   N V   TL+      G+  +A+SLLD M+
Sbjct: 242 FNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 301

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S+    VVT+  +I+GL K G   +       M + G H N  VY+ALI GL K+   +
Sbjct: 302 SSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQ 361

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF EM  ++   +T  Y+A+IDG  +     EAL + + MT      +   Y+SL+
Sbjct: 362 EAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLM 421

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G    G+  +A  ++ +M       +E+    L+    + G + EA+ +  +M+G+G
Sbjct: 422 KGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKG 479



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 2/224 (0%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  +I GL  E K +++  L  EM       NT++ + ++D   + G+P EAL +L EM
Sbjct: 346 VYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEM 405

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            ++R +    T+  L+ G  ++G   +AI+ +  M       N   Y+ LI GLCK   +
Sbjct: 406 TNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKV 465

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM--TEVGVDLDLNAYT 189
           + A  ++ +M  +   PD  AY ++I+G       ++AL L N M   E     D+  Y 
Sbjct: 466 KEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYN 525

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
            L+  L +   +  A  L + M+ RG  PD + CI  L+   E+
Sbjct: 526 ILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREK 569



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 13/219 (5%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSR---IEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
            ++++   + G    AL   + ++ ++   I   V+TF ++I  +CK GLV +A+  F  
Sbjct: 135 NSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRD 194

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           MP     P+V  Y  L+DGLCK + I+ A +L DEM      P    +  LI+G  K   
Sbjct: 195 MPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGD 254

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
                 L + M   G   +   Y +L+ GL   G L++A  L   M+    +P+ +   +
Sbjct: 255 LARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGT 314

Query: 226 LLKKHYERGN----------MDEAIELQNEMMGRGLLSG 254
           ++    ++G           M+E     NE +   L+SG
Sbjct: 315 IINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISG 353



 Score = 64.7 bits (156), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 39/238 (16%)

Query: 50  TLMDAYFKAGE-----------------------------------PSEALSLLDEM-LD 73
           +L+D Y   G+                                   P +A+ L D M  +
Sbjct: 65  SLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYE 124

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM---PDFGLHPNVAVYTALIDGLCKKNC 130
              + TV +F  +++ + + GL   A++++  +       + PNV  +  +I  +CK   
Sbjct: 125 FECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGL 184

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           ++ A  +F +MP     PD   Y  L+DG  K +   EA++L + M   G       +  
Sbjct: 185 VDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNV 244

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           L+ GL + G L     L   M  +G  P+E+   +L+     +G +++AI L + M+ 
Sbjct: 245 LINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVS 302


>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
          Length = 689

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D      ++  L        ++ +  +M   G+  NT +   ++    KAG+
Sbjct: 228 MRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGD 287

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A SL+  M  + + +   +F  +I   C+ G+  EA+    RM + G+  +V  + +
Sbjct: 288 AALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNS 347

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK+  ++ A  L  EM    + PD   YT L+DGY +    +EA+ L+  M  +G
Sbjct: 348 LIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMG 407

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +++  L   G ++E  VL +EM  R +  D + C +L+  + +RG+M  A+
Sbjct: 408 MLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSAL 467

Query: 241 ELQNEMMGRGL 251
           +++  MM  GL
Sbjct: 468 KVKRRMMESGL 478



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   + T+I   C +    ++  +   M+  G+ A+ V   +L+    K   
Sbjct: 298 MDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERR 357

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM  + +    VT+  L+DG C++G + EA+   G M   G+ P VA Y A
Sbjct: 358 VKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNA 417

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LC+   ++    L +EM +R +  D      LI+ Y K      AL +K RM E G
Sbjct: 418 ILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESG 477

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD   Y +LV G  +   L EA+    EM+G G  P+  +   ++     + N    +
Sbjct: 478 LQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVL 537

Query: 241 ELQNEMMGRGL 251
            + +E+M RG 
Sbjct: 538 AIPDELMKRGF 548



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +KAD+  + ++I GLC E + +++  LL EM   G+  + V  TTL+D Y +AG+
Sbjct: 333 MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGD 392

Query: 61  PSEALSL-----------------------------------LDEMLDSRIEVTVVTFCV 85
             EA+ L                                   L+EM + +++   VT   
Sbjct: 393 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNT 452

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+  CK G +  A+    RM + GL  +   Y AL+ G CK   ++ A+    EM    
Sbjct: 453 LINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAG 512

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+ +  + ++DG     +    L + + + + G   D   Y SL+  L + G +  A 
Sbjct: 513 FSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAG 572

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +F+EM G+G+  D ++  +L   +   G    A+++ NEM  + L
Sbjct: 573 NVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQL 618



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 91/198 (45%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           ++  P +AL + D M    +         L+  L KS +   A   F +M   G+  N  
Sbjct: 214 QSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTH 273

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           VY A++    K      A +L   M    +  D  ++  +I  Y +     EA+ ++ RM
Sbjct: 274 VYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERM 333

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              GV  D+  + SL+ GL +   ++EA  L  EM   G+ PD +   +L+  +   G++
Sbjct: 334 ENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDL 393

Query: 237 DEAIELQNEMMGRGLLSG 254
           +EA++L+ EM   G+L G
Sbjct: 394 EEAVKLRGEMEAMGMLPG 411



 Score = 70.9 bits (172), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 95/223 (42%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           ++  D+  +   M+   +  +    + L+ A  K+   + A  + D+M  + + +    +
Sbjct: 216 ARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVY 275

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             ++    K+G    A     RM   G+  +   +  +I   C+K     A  + + M  
Sbjct: 276 NAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMEN 335

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           + +  D   + +LI G  K    KEA  L   M   GV  D   YT+LV G  R G L+E
Sbjct: 336 QGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEE 395

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           A  L  EM   G+LP      ++L+K  E G M E   L NEM
Sbjct: 396 AVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEM 438



 Score = 43.9 bits (102), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 42/76 (55%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +    D  +Y ++I  LC +   + +  + +EM+  GL A+ ++  TL  AY  AG+P  
Sbjct: 546 RGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVA 605

Query: 64  ALSLLDEMLDSRIEVT 79
           AL +L+EM   ++ +T
Sbjct: 606 ALDILNEMAKKQLYIT 621


>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 886

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 125/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K D   Y T++  L    +F     LL EM  +G   NTV    L+ +Y +A   +EA+
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           ++ ++M ++  +   VT+C LID   K+G +  A+D + RM   GL P+   Y+ +I+ L
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +  A  LF EM  +   P+   Y  ++D + K  +++ AL L   M   G + D 
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+ ++  L  CG+L+EA  +F EM  +  +PDE +   L+    + GN+++A +    
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 600 MLHAGL 605



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 2/220 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAG 59
           M+    K D   Y T+I  +  ++ F D  + +   M+  GL+ +T   + +++   KAG
Sbjct: 425 MQEAGCKPDRVTYCTLI-DIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
               A  L  EM+D      +VT+ +++D   K+   + A+  +  M + G  P+   Y+
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYS 543

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +++ L     +E A  +F EM +++ IPD   Y  L+D + K  + ++A      M   
Sbjct: 544 IVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHA 603

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           G+  ++    SL+    R   + EA  L   M+  G+ P 
Sbjct: 604 GLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 80/192 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D   Y  II  L        +  L  EM + G T N V    +MD + KA  
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L  +M ++  E   VT+ ++++ L   G + EA   F  M      P+  VY  
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D   K   +E+A   +  M    + P+     +L+  +L+     EA  L   M  +G
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639

Query: 181 VDLDLNAYTSLV 192
           +   L  YT L+
Sbjct: 640 LRPSLQTYTLLL 651


>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
          Length = 378

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 116/227 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K++   +  YG+II GL    + +++ +L  E K  G+  N ++ ++L+D + K G 
Sbjct: 120 MKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGR 179

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L+EM+   +   V T+  L+D L K+  + EA+  F  M +    PN   Y+ 
Sbjct: 180 IDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSI 239

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC+     +A   + EM K+ ++P+   YT +I G  K  +  +A +L  R    G
Sbjct: 240 LINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANG 299

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
              D  ++ +L+ G+S      EA  +F E   RG   +   CISLL
Sbjct: 300 GIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRINVKACISLL 346



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 119/250 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +KG     D+  Y  +I GL    +  ++  +   MK+ G   +      ++D + K+G+
Sbjct: 50  IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGK 109

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A   L+EM    +  TV T+  +IDGL K   + EA   F      G+  NV VY++
Sbjct: 110 VDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 169

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   I+ A  + +EM K+ + P+   + +L+D  +K E   EAL     M E+ 
Sbjct: 170 LIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMK 229

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y+ L+ GL R     +A V + EM  +G++P+ +   +++    + GN+ +A 
Sbjct: 230 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDAC 289

Query: 241 ELQNEMMGRG 250
            L       G
Sbjct: 290 SLFERFKANG 299



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 104/214 (48%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           ED   +  EM   G   +  +  T MD  FKAG+  +  ++ +++        V ++ +L
Sbjct: 6   EDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSIL 65

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I GL K+G  RE    F  M   G   +   Y A++DG CK   +++A    +EM  + +
Sbjct: 66  IHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHV 125

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P    Y ++IDG  K +   EA  L       G++L++  Y+SL+ G  + G + EA +
Sbjct: 126 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 185

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  EM+ +G+ P+     SL+    +   ++EA+
Sbjct: 186 ILEEMMKKGLAPNVYTWNSLMDALVKAEEINEAL 219



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 110/250 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    D   Y  ++ G C   K + +   L EMK   +        +++D   K   
Sbjct: 85  MKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDR 144

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L +E     IE+ V+ +  LIDG  K G + EA      M   GL PNV  + +
Sbjct: 145 LDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNS 204

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D L K   I  A   F  M +    P+T  Y+ LI+G  + + + +A      M + G
Sbjct: 205 LMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 264

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  YT+++ GL++ G++ +A  LF      G +PD     +L++         EA 
Sbjct: 265 LVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAY 324

Query: 241 ELQNEMMGRG 250
            +  E   RG
Sbjct: 325 HVFEETRLRG 334



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 104/206 (50%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K K I+ ++ +Y ++I G     + +++ L+L EM + GL  N     +LMDA  KA E 
Sbjct: 156 KSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEI 215

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +EAL     M + +      T+ +LI+GLC+     +A  ++  M   GL PNV  YT +
Sbjct: 216 NEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTM 275

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I GL K   I  A +LF+       IPD  ++ ALI+G        EA ++       G 
Sbjct: 276 ISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGC 335

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVL 207
            +++ A  SL+  L++   +++A V+
Sbjct: 336 RINVKACISLLDALNKAECIEQAAVV 361


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 125/252 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y TII+G     K +D+  +L + K  G   +     +L+    + G+
Sbjct: 284 MVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGD 343

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL+L +E L   ++ ++V +  LI GL + GLV +A+     M   G+ P++  Y  
Sbjct: 344 IDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNL 403

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK  C+  A NL +    +  +PD   +  LIDGY K      A+ + + M   G
Sbjct: 404 VINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHG 463

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y S++ GL +    ++    F  ++ +G LP+ I    L++   +   + EA+
Sbjct: 464 VTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEAL 523

Query: 241 ELQNEMMGRGLL 252
           +L  E+  RGL+
Sbjct: 524 DLLEEIRNRGLI 535



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 7/254 (2%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N +  +  Y  I+  L     F  +  +   MK  G+  +    T  + ++ +   P  A
Sbjct: 106 NCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAA 165

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           L LL+ M     E+  V +C +I G  +     EA + F +M   G+ P++A +  L+  
Sbjct: 166 LRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHI 225

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK-------HESFKEALNLKNRMT 177
           LCKK  ++    L +++ K  + P+   +   I G  +       +    EA N  ++M 
Sbjct: 226 LCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMV 285

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
             G++ D   Y ++++G S+ G +Q+A  +  +   +G +PDE    SL+    + G++D
Sbjct: 286 NKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDID 345

Query: 238 EAIELQNEMMGRGL 251
            A+ L  E +G+GL
Sbjct: 346 HALALFEEALGKGL 359



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 7/258 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  D+  +   I   C   +   +  LL+ M   G   N V+  T++  +++   
Sbjct: 137 MKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENY 196

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L ++ML   I   + TF  L+  LCK G ++E      ++   G+ PN+  +  
Sbjct: 197 QVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNI 256

Query: 121 LIDGLCKKNCIE-------RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
            I GLC+K  +E        A N   +M  + + PD   Y  +I GY K    ++A  + 
Sbjct: 257 FIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRIL 316

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
                 G   D   Y SL+ G+ + G +  A  LF E +G+G+ P  +L  +L+K   ++
Sbjct: 317 KDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQ 376

Query: 234 GNMDEAIELQNEMMGRGL 251
           G + +A++L N+M   G+
Sbjct: 377 GLVLKALQLMNDMSKEGM 394



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 1/243 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y  +I GLC      D+  LL+     G   +     TL+D Y K  +
Sbjct: 389 MSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLK 448

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +LD M    +   V+T+  +++GLCK+    + ++ F  + + G  PN+  Y  
Sbjct: 449 MDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNI 508

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
           LI+ LCK   +  A +L +E+  R +IPD  ++  +I G+  +    EA  L  RM  + 
Sbjct: 509 LIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQY 568

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            +   +  Y  ++   S    +  A+ LFHEM  +G  PD      ++    + GN++  
Sbjct: 569 RICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSG 628

Query: 240 IEL 242
            + 
Sbjct: 629 YDF 631



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 116/245 (47%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K K    D   Y ++I G+C +   + +  L  E    GL  + V+  TL+    + G  
Sbjct: 320 KFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLV 379

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +AL L+++M    +   + T+ ++I+GLCK G V +A +        G  P++  +  L
Sbjct: 380 LKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTL 439

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           IDG CK+  ++ A  + D M    + PD   Y ++++G  K    ++ +     + E G 
Sbjct: 440 IDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGC 499

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             ++  Y  L+  L +   + EA  L  E+  RG++PD +   +++      G++DEA +
Sbjct: 500 LPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQ 559

Query: 242 LQNEM 246
           L   M
Sbjct: 560 LFRRM 564



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 1/225 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D+  Y +I+ GLC  +K ED       + E G   N +    L+++  KA +
Sbjct: 459 MWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARK 518

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
            +EAL LL+E+ +  +    V+F  +I G C +G + EA   F RM   + +   VA Y 
Sbjct: 519 VTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYN 578

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I+   +K  ++ A+ LF EM  +   PD+  Y  +IDG+ K  +     +   +  E+
Sbjct: 579 IMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEI 638

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
           G    L  +  ++  L     + EA  + H M+  G++P+ ++ I
Sbjct: 639 GFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVVTI 683



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 42/293 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + +  +Y T+I G   E+   ++  L ++M   G+  +      LM    K G 
Sbjct: 172 MPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGH 231

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL-------VREAIDYFGRMPDFGLHP 113
             E   LL+++L + +   + TF + I GLC+ G+       V EA +Y  +M + GL P
Sbjct: 232 LQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEP 291

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI-----DGYLKH--ESF 166
           +   Y  +I G  K   I+ A  +  +   +  +PD   Y +LI     DG + H    F
Sbjct: 292 DDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALF 351

Query: 167 KE----------------------------ALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
           +E                            AL L N M++ G+  D+  Y  ++ GL + 
Sbjct: 352 EEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKM 411

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G + +A  L +  I +G LPD     +L+  + +R  MD AI + + M   G+
Sbjct: 412 GCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGV 464



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 113/249 (45%), Gaps = 12/249 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMK---ENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           Y  +I  L    +F+  + +L EM+   +N L     +  + M  Y + G+  EA+ + +
Sbjct: 43  YKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYV--SAMRNYGRKGKVQEAVDVFE 100

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
            M     E ++ ++  +++ L + G   +A   + RM   G+ P+V  +T  I   C+  
Sbjct: 101 RMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTK 160

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
               A  L + MP +    +   Y  +I G+ +     EA  L N+M  +G+   +  + 
Sbjct: 161 RPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFN 220

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNMDEAIELQN- 244
            L+  L + GHLQE   L ++++  G+ P+     I    L +K    G   + +E +N 
Sbjct: 221 KLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENY 280

Query: 245 --EMMGRGL 251
             +M+ +GL
Sbjct: 281 LHKMVNKGL 289


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  119 bits (297), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 119/240 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++ +Y T+I GLC   +   +  LL+EM++ GL A+ V   TL+     +G  S+A  
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L +M+   I   VVTF  LID   K G + EA + +  M    + PN   Y ++I+GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
               +  A+  FD M  +   P+   Y  LI G+ K     E + L  RM+  G + D+ 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +L+ G  + G L+ A  +F  M+ R + PD I    LL      G ++ A+   ++M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 101/211 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K + AD+  Y T++ GLC   ++ D+  +L +M +  +  + V  T L+D + K G 
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM+ S ++   VT+  +I+GLC  G + +A   F  M   G  PNV  Y  
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++    LF  M       D   Y  LI GY +    + AL++   M    
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           V  D+  +  L+ GL   G ++ A V F +M
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDM 412



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 115/246 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  DL  +  +I   C  S+   +  +L +M + G   + V   +L+  +       +A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL+  M+ S  E  VV +  LIDGLCK+G +  A++    M   GL  +V  Y  L+ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  +  +M KR + PD   +TALID ++K  +  EA  L   M +  VD + 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y S++ GL   G L +A+  F  M  +G  P+ +   +L+    +   +DE ++L   
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 246 MMGRGL 251
           M   G 
Sbjct: 342 MSCEGF 347



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 89/187 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  Y T+I G C     ++   L   M   G  A+     TL+  Y + G+
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +   M+  R+   ++T C+L+ GLC +G +  A+  F  M +   +  +  Y  
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK + +E+A  LF  +P   + PD   YT +I G  K+   +EA  L  RM E G
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486

Query: 181 VDLDLNA 187
           +   +NA
Sbjct: 487 IICQMNA 493



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 92/205 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II GLC+  +  D+K     M   G   N V   TL+  + K     E + L   M 
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  + T+  LI G C+ G +R A+D F  M    + P++  +  L+ GLC    IE
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   FD+M + +      AY  +I G  K +  ++A  L  R+   GV  D   YT ++
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

Query: 193 WGLSRCGHLQEARVLFHEMIGRGIL 217
            GL + G  +EA  L   M   GI+
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGII 488



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 86/189 (45%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A +L  EM+ S+   ++V F  L+            I +  +M  +G+  ++  +T LI
Sbjct: 54  DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
              C+ + +  A ++  +M K    P    + +L+ G+       +A +L   M + G +
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL + G L  A  L +EM  +G+  D +   +LL      G   +A  +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233

Query: 243 QNEMMGRGL 251
             +MM R +
Sbjct: 234 LRDMMKRSI 242


>gi|357442909|ref|XP_003591732.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480780|gb|AES61983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 344

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 133/257 (51%), Gaps = 3/257 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++GK + +D+ +Y TII GLC +    D+  L SEM    ++ +     +L+  +   G+
Sbjct: 8   IEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQ 67

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  +M+   I  +V TF +L+DGLCK G ++EA      M   G+ PNV  YT+
Sbjct: 68  LKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTS 127

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G C  N + + +++F  + +  + P+T +Y  +I+G+ K +   EAL L   M   G
Sbjct: 128 IMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRG 187

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y+SL+ GL +   L    +    M+   I P  +L I  L K     ++D+AI
Sbjct: 188 IVPITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLYIDALCK---SNHLDKAI 244

Query: 241 ELQNEMMGRGLLSGSKN 257
            L  ++  +G L  +++
Sbjct: 245 ALVKKIKDQGRLKNAQD 261



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 48/264 (18%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KNI   +  +  ++ GLC E K +++K +++ M ++G+  N V  T++M+ Y    E ++
Sbjct: 81  KNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNK 140

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              +   +    +     ++ ++I+G CK  +V EA+  F  M   G+ P    Y++LID
Sbjct: 141 TKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLID 200

Query: 124 GLCKKNCI------------------------------------------------ERAR 135
           GLCK   +                                                + A+
Sbjct: 201 GLCKSTMLGSLLMRCMLMVNHLIYPLTVLYIDALCKSNHLDKAIALVKKIKDQGRLKNAQ 260

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
           ++F ++  +    +   Y  +I+G  K   F EA  L ++M + G+  D   Y + +  L
Sbjct: 261 DVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPDAVTYETNIRAL 320

Query: 196 SRCGHLQEARVLFHEMIGRGILPD 219
                 ++A  LF +MI RG+L +
Sbjct: 321 FHKDENEKAEKLFRKMIARGLLKE 344



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 92/184 (50%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D++    +   VV +  +IDGLCK  LV +A + +  M    + P+VA + +LI G C  
Sbjct: 6   DQIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCII 65

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  LF +M  +++ P    +T L+DG  K    KEA ++   M + GV  ++  Y
Sbjct: 66  GQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTY 125

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           TS++ G      + + + +F  +   G+ P+      ++    +   ++EA+ L  EM  
Sbjct: 126 TSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCC 185

Query: 249 RGLL 252
           RG++
Sbjct: 186 RGIV 189


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    D+  Y  ++ GLC   +F  +  +L EM+E G   N V  +TL+ ++ + G 
Sbjct: 339 MGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGM 398

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A ++LD+ML     +    +  +I  LCK G + +A      M   G  P++  Y  
Sbjct: 399 WDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNT 458

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LC  + +E A ++F  + +  ++ +   Y  LI   L++  ++E L L + M   G
Sbjct: 459 MIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG 518

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             LD+ +Y  L+  L + G++  +  L  EM+ +GI P+      L+ +  + G + +A+
Sbjct: 519 CQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDAL 578

Query: 241 ELQNEMMGRGL 251
           EL  EM+ +GL
Sbjct: 579 ELSKEMLNQGL 589



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 105/220 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +  K D+  Y T+I+ LC     E+++ +   + E G+ AN +   TL+ A  + G 
Sbjct: 444 MKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGR 503

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E L L  EML    ++ V+++  LI  LCK G V  ++     M   G+ PN   Y  
Sbjct: 504 WQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNM 563

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+ LCK   +  A  L  EM  + + PD   Y  LI+G  K      ALNL  ++    
Sbjct: 564 LINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 623

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           V  D+  Y  L+    +   L +A +L  + I  GI+P+E
Sbjct: 624 VHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNE 663



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 109/244 (44%), Gaps = 4/244 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G     LC   +  D+  LL  M  +G   + V+  T++ A    G  +EA  LLDEML
Sbjct: 180 FGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEML 239

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  V TF  L+ GLC  G VREA     RM   G  P+V  Y  L+ GLC+    +
Sbjct: 240 LMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQAD 299

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +   +P+ +++   T    +I G L       A  L   M   G   D++ Y+ L+
Sbjct: 300 EACAMLGRLPEVNVVMLNT----VIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILM 355

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL + G    A  +  EM  +G  P+ +   +LL      G  D+A  + ++M+ +G  
Sbjct: 356 HGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFS 415

Query: 253 SGSK 256
             S+
Sbjct: 416 MNSQ 419



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 4/242 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  LY T+I  L  +    ++ +LL EM   G  A+      L+      G   EA  L+
Sbjct: 211 DAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLV 270

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+      +VVT+  L+ GLC++    EA    GR+P+     NV +   +I G   +
Sbjct: 271 DRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV----NVVMLNTVIRGCLTE 326

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             + RA  L++ M  +   PD   Y+ L+ G  K   F  A+ + + M E G   ++  Y
Sbjct: 327 GKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTY 386

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           ++L+    R G   +AR +  +M+ +G   +      ++    + G +D+A  L  EM  
Sbjct: 387 STLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKS 446

Query: 249 RG 250
           +G
Sbjct: 447 QG 448



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 112/251 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+  + ++ +  T+I G   E K   +  L   M   G   +    + LM    K G 
Sbjct: 304 MLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGR 363

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +LDEM +      +VT+  L+   C++G+  +A     +M   G   N   Y  
Sbjct: 364 FGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNG 423

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK   +++A  L  EM  +   PD   Y  +I     ++  +EA ++   + E G
Sbjct: 424 IIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEG 483

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y +L+  L R G  QE   L  EM+  G   D I    L+K   + GN+D ++
Sbjct: 484 VVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSM 543

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G+
Sbjct: 544 ALLEEMVTKGI 554



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 110/244 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II+ LC + K + +  L+ EMK  G   +     T++          EA  +   ++
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +    +T+  LI  L ++G  +E +     M   G   +V  Y  LI  LCK+  ++
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVD 540

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           R+  L +EM  + + P+  +Y  LI+   K    ++AL L   M   G+  D+  Y +L+
Sbjct: 541 RSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL + G    A  L  ++    + PD +    L+  H +   +D+A  L ++ +  G++
Sbjct: 601 NGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIV 660

Query: 253 SGSK 256
              +
Sbjct: 661 PNER 664



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I  LC E   + S  LL EM   G+  N      L++   KAG+  +AL L 
Sbjct: 522 DVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELS 581

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EML+  +   +VT+  LI+GLCK G    A++   ++P+  +HP++  Y  LI   CK 
Sbjct: 582 KEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKV 641

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH 163
             ++ A  L D+     ++P+   +  ++  +++ 
Sbjct: 642 RLLDDAAMLLDKAISGGIVPNERTWGMMVQNFVRQ 676



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 4/212 (1%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           AD+  +  ++ GLC   +  ++  L+  M   G   + V    L+    +  +  EA ++
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L  +     EV VV    +I G    G +  A + +  M   G  P+V  Y+ L+ GLCK
Sbjct: 305 LGRL----PEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCK 360

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
                 A  + DEM ++   P+   Y+ L+  + ++  + +A  + ++M   G  ++   
Sbjct: 361 LGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQG 420

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           Y  +++ L + G L +A  L  EM  +G  PD
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPD 452



 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 5/187 (2%)

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           ++AL L   ML  R+  T  TF V    LC+ G   +A+     M   G  P+  +Y  +
Sbjct: 159 ADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTV 218

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I  L  +  +  A  L DEM       D   +  L+ G       +EA  L +RM   G 
Sbjct: 219 IHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGC 278

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
              +  Y  L+ GL R     EA      M+GR    + ++  ++++     G +  A E
Sbjct: 279 MPSVVTYGFLLQGLCRTRQADEA----CAMLGRLPEVNVVMLNTVIRGCLTEGKLARATE 334

Query: 242 LQNEMMG 248
           L  EMMG
Sbjct: 335 LY-EMMG 340



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 7/189 (3%)

Query: 63  EALSLLDEMLDSRIEVT--VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            AL LLD+M   R  V+    ++ V++  L ++    +A+  + RM    + P    +  
Sbjct: 124 RALHLLDQM-PRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGV 182

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
               LC+      A  L   M +   +PD   Y  +I   +      EA  L + M  +G
Sbjct: 183 AARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMG 242

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+N +  LV GL   G ++EA  L   M+ +G +P  +    LL+        DEA 
Sbjct: 243 CAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEAC 302

Query: 241 ELQNEMMGR 249
                M+GR
Sbjct: 303 ----AMLGR 307



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 60/128 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK +   Y  +I  LC   K  D+  L  EM   GLT + V   TL++   K G 
Sbjct: 549 MVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGW 608

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL+LL+++ +  +   +VT+ +LI   CK  L+ +A     +    G+ PN   +  
Sbjct: 609 THAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGM 668

Query: 121 LIDGLCKK 128
           ++    ++
Sbjct: 669 MVQNFVRQ 676


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 123/241 (51%), Gaps = 4/241 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           TI+ GLCIE     +  L+ +M+  G   N      L++   K G+ S AL  L +M+  
Sbjct: 150 TIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKR 209

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK-NCIER 133
            +   VV +  ++DGLCK GLV EA+     M    + PNV  Y  LI GLC +      
Sbjct: 210 NLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWRE 269

Query: 134 ARNLFDEM-PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
              LF+EM  ++ ++PD   ++ L+DG+ K      A ++   M  +GV+ ++  Y SL+
Sbjct: 270 GVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLI 329

Query: 193 WGLSRCGHLQEARVLFHEMI--GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G      ++EA  +F  M+  G G LP  +   SL+    +   +D+A+ L +EM+G+G
Sbjct: 330 AGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKG 389

Query: 251 L 251
           L
Sbjct: 390 L 390



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 115/249 (46%), Gaps = 2/249 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K I  D+  +  ++ G C E     ++ ++  M   G+  N V   +L+  Y    +  E
Sbjct: 281 KGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEE 340

Query: 64  ALSLLDEML--DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           A+ +   M+        +VVT   LI G CK   V +A+     M   GL P+V  +T+L
Sbjct: 341 AMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSL 400

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I G C+      AR LF  M +   +P+      ++DG LK     EA+ L   M + G+
Sbjct: 401 IGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGL 460

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           DLD+  Y  ++ G+ + G L +AR L   ++ +G+  D      ++K     G +D+A E
Sbjct: 461 DLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEE 520

Query: 242 LQNEMMGRG 250
           L  +M   G
Sbjct: 521 LLRKMKENG 529



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 4/251 (1%)

Query: 5   NIKADLPLYGTIIWGLCIE-SKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPS 62
           N++ ++  Y  +I GLC E   + +   L +EM  E G+  +    + L+D + K G   
Sbjct: 245 NVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLL 304

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--PDFGLHPNVAVYTA 120
            A S++  M+   +E  VVT+  LI G C    + EA+  FG M     G  P+V  + +
Sbjct: 305 RAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNS 364

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   +++A +L  EM  + + PD   +T+LI G+ + +    A  L   M E G
Sbjct: 365 LIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHG 424

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L     ++ GL +C    EA  LF  M+  G+  D ++   +L    + G +++A 
Sbjct: 425 QVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDAR 484

Query: 241 ELQNEMMGRGL 251
           +L + ++ +GL
Sbjct: 485 KLLSCVLVKGL 495



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 6/160 (3%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
             ++L  M    +E T+VT   +++GLC  G V  A+    +M + G H N   Y AL++
Sbjct: 129 GFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVN 188

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCK      A     +M KR++ P+   Y A++DG  K     EAL L + M  V V+ 
Sbjct: 189 GLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEP 248

Query: 184 DLNAYTSLVWGLSRCGHL---QEARVLFHEMIG-RGILPD 219
           ++  Y  L+ GL  CG     +E   LF+EM+  +GI+PD
Sbjct: 249 NVVTYNCLIQGL--CGEFGGWREGVGLFNEMVAEKGIVPD 286



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 91/196 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK +  D+  + ++I G C   K   ++ L   MKE+G   N   C  ++D   K   
Sbjct: 385 MVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWL 444

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA++L   M+ S +++ +V + +++DG+CK G + +A      +   GL  +   Y  
Sbjct: 445 DSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNI 504

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLC++  ++ A  L  +M +    P+  +Y   + G L+      +      M + G
Sbjct: 505 MIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKG 564

Query: 181 VDLDLNAYTSLVWGLS 196
             +D      L+  LS
Sbjct: 565 FPVDATTAELLIRFLS 580



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 107/231 (46%), Gaps = 6/231 (2%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEM--KENGLTANTVICTTLMDAYFKAGEPSE 63
           ++ ++  Y ++I G C+ S+ E++  +   M  +  G   + V   +L+  + K  E  +
Sbjct: 318 VEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDK 377

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+SLL EM+   ++  V T+  LI G C+      A + F  M + G  PN+     ++D
Sbjct: 378 AMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLD 437

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K      A  LF  M K  +  D   Y  ++DG  K     +A  L + +   G+ +
Sbjct: 438 GLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKI 497

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE----ILCISLLKKH 230
           D   Y  ++ GL R G L +A  L  +M   G  P++    +    LL+K+
Sbjct: 498 DSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKY 548



 Score = 73.6 bits (179), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 92/207 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + ++I G C   + + +  LLSEM   GL  +    T+L+  + +  +P  A  L   M 
Sbjct: 362 HNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMK 421

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +      + T  V++DGL K  L  EA+  F  M   GL  ++ +Y  ++DG+CK   + 
Sbjct: 422 EHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLN 481

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR L   +  + +  D+  Y  +I G  +     +A  L  +M E G   +  +Y   V
Sbjct: 482 DARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFV 541

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD 219
            GL R   +  +R     M  +G   D
Sbjct: 542 QGLLRKYDIARSRKYLQIMKDKGFPVD 568


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 119/240 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++ +Y T+I GLC   +   +  LL+EM++ GL A+ V   TL+     +G  S+A  
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L +M+   I   VVTF  LID   K G + EA + +  M    + PN   Y ++I+GLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
               +  A+  FD M  +   P+   Y  LI G+ K     E + L  RM+  G + D+ 
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +L+ G  + G L+ A  +F  M+ R + PD I    LL      G ++ A+   ++M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412



 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 122/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     ++ +Y T+I GLC      ++  +   M++ G+ A+ V   TL+     +G 
Sbjct: 700 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 759

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  LL +M+  +I+  V+ F  LID   K G + EA + +  M    + PNV  Y +
Sbjct: 760 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 819

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C   C+  A+ +FD M  +   PD   Y  LI G+ K +  ++ + L   MT  G
Sbjct: 820 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 879

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +L+ G  + G L  A+ +F+ M+  G+ PD +    LL      G +++A+
Sbjct: 880 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 939

Query: 241 ELQNEM 246
            +  ++
Sbjct: 940 VMVEDL 945



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 101/211 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K + AD+  Y T++ GLC   ++ D+  +L +M +  +  + V  T L+D + K G 
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L  EM+ S ++   VT+  +I+GLC  G + +A   F  M   G  PNV  Y  
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G CK   ++    LF  M       D   Y  LI GY +    + AL++   M    
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           V  D+  +  L+ GL   G ++ A V F +M
Sbjct: 382 VTPDIITHCILLHGLCVNGEIESALVKFDDM 412



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 109/231 (47%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  +++  ++  Y ++I G CI     D+K +   M   G   + V   TL+  + K+  
Sbjct: 805  MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 864

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              + + L  EM    +     T+  LI G C++G +  A   F RM D G+ P++  Y  
Sbjct: 865  VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 924

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L+D LC    IE+A  + +++ K +M  D   Y  +I G  + +  KEA  L   +T  G
Sbjct: 925  LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 984

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
            V  D  AY +++ GL R G  +EA  L   M   G +P E +    L+ HY
Sbjct: 985  VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 1035



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 119/238 (50%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G+++ G C  ++F+++  L+  M   G   N VI  T+++   K  + + AL +   M  
Sbjct: 678 GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK 737

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             I    VT+  LI GL  SG   +A      M    + PNV  +TALID   K+  +  
Sbjct: 738 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 797

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           ARNL+ EM +R ++P+   Y +LI+G+  H    +A  + + M   G   D+  Y +L+ 
Sbjct: 798 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 857

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  +   +++   LF EM  +G++ D     +L+  + + G ++ A ++ N M+  G+
Sbjct: 858 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 915



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 125/291 (42%), Gaps = 35/291 (12%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M+ K I+AD   Y T+I GL    ++ D+  LL +M +  +  N +  T L+D + K G 
Sbjct: 735  MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 794

Query: 61   PSEALSLLDEMLDSRIEVTVVT-------FCV---------------------------- 85
              EA +L  EM+   +   V T       FC+                            
Sbjct: 795  LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 854

Query: 86   LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
            LI G CKS  V + +  F  M   GL  +   Y  LI G C+   +  A+ +F+ M    
Sbjct: 855  LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 914

Query: 146  MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            + PD   Y  L+D    +   ++AL +   + +  +D+D+  Y  ++ GL R   L+EA 
Sbjct: 915  VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 974

Query: 206  VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
             LF  +  +G+ PD I  I+++     +G   EA +L   M   G +   +
Sbjct: 975  CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSER 1025



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 115/246 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  DL  +  +I   C  S+   +  +L +M + G   + V   +L+  +       +A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL+  M+ S  E  VV +  LIDGLCK+G +  A++    M   GL  +V  Y  L+ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C       A  +  +M KR + PD   +TALID ++K  +  EA  L   M +  VD + 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y S++ GL   G L +A+  F  M  +G  P+ +   +L+    +   +DE ++L   
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 246 MMGRGL 251
           M   G 
Sbjct: 342 MSCEGF 347



 Score = 96.7 bits (239), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  DL  +  +I   C  S+   +  LL +M + G   + V   +L++ + +   
Sbjct: 630 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 689

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+SL+D M        VV +  +I+GLCK+  +  A++ F  M   G+  +   Y  
Sbjct: 690 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 749

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL        A  L  +M KR + P+   +TALID ++K  +  EA NL   M    
Sbjct: 750 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 809

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y SL+ G    G L +A+ +F  M+ +G  PD +   +L+    +   +++ +
Sbjct: 810 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 869

Query: 241 ELQNEMMGRGLL 252
           +L  EM  +GL+
Sbjct: 870 KLFCEMTYQGLV 881



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 108/228 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           KF+D+  L  EM ++    + V  T ++    K  +    + L  +M +  I   + +F 
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI   C+   +  A+   G+M   G  P++    +L++G C+ N  + A +L D M   
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
             +P+   Y  +I+G  K+     AL +   M + G+  D   Y +L+ GLS  G   +A
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L  +M+ R I P+ I   +L+    + GN+ EA  L  EM+ R ++
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 811



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 89/187 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  Y T+I G C     ++   L   M   G  A+     TL+  Y + G+
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +   M+  R+   ++T C+L+ GLC +G +  A+  F  M +   +  +  Y  
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK + +E+A  LF  +P   + PD   YT +I G  K+   +EA  L  RM E G
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486

Query: 181 VDLDLNA 187
           +   +NA
Sbjct: 487 IICQMNA 493



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 92/205 (44%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y +II GLC+  +  D+K     M   G   N V   TL+  + K     E + L   M 
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  + T+  LI G C+ G +R A+D F  M    + P++  +  L+ GLC    IE
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   FD+M + +      AY  +I G  K +  ++A  L  R+   GV  D   YT ++
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

Query: 193 WGLSRCGHLQEARVLFHEMIGRGIL 217
            GL + G  +EA  L   M   GI+
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGII 488



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 113/227 (49%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           +KF+    L  +M+  G++ +    T L+  + +    S AL+LL +M+      ++VT 
Sbjct: 618 NKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTL 677

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             L++G C+    +EA+     M  FG  PNV +Y  +I+GLCK   +  A  +F  M K
Sbjct: 678 GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK 737

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           + +  D   Y  LI G      + +A  L   M +  +D ++  +T+L+    + G+L E
Sbjct: 738 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 797

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           AR L+ EMI R ++P+     SL+      G + +A  + + M+ +G
Sbjct: 798 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 844



 Score = 57.0 bits (136), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 86/189 (45%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A +L  EM+ S+   ++V F  L+            I +  +M  +G+  ++  +T LI
Sbjct: 54  DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
              C+ + +  A ++  +M K    P    + +L+ G+       +A +L   M + G +
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL + G L  A  L +EM  +G+  D +   +LL      G   +A  +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233

Query: 243 QNEMMGRGL 251
             +MM R +
Sbjct: 234 LRDMMKRSI 242


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 116/240 (48%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  II  L  + K  +++L  + M+++G+    V  T L+D   KA   + A  +    L
Sbjct: 209 YNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYL 268

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +S    +VV    L+DG CK G V EA   F  M + G  PN      LI+GLCK   + 
Sbjct: 269 ESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLS 328

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +AR +F+E+ KR   PD   Y+  +DG  +     +A  +   + + G   D+  YT+L+
Sbjct: 329 QAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALI 388

Query: 193 WGLSRCGHLQEARVLFH-EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL   G L EAR +F  +M   G  P+   C  L+      G +DEA EL    + RG+
Sbjct: 389 SGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGV 448



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 117/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK          Y T+I GLC   +  +++     +  +G  A+ +    L+D + KA  
Sbjct: 127 MKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR 186

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL+E++     VT   +  +ID L K G + EA  +F RM   G+ P    +T 
Sbjct: 187 VPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTV 246

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK N + RA+ +F    +    P     + L+DG+ K+    EA  +   MT  G
Sbjct: 247 LIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRG 306

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +  +   L+ GL +   L +AR +F E++ R   PD +   + +        +D+A 
Sbjct: 307 CTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQAR 366

Query: 241 ELQNEMMGRG 250
           ++   ++ +G
Sbjct: 367 QVLCMLVDKG 376



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 1/220 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++     +  +I GLC  ++   +K +     E+G + + VIC+ LMD + K G 
Sbjct: 232 MEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGG 291

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + + M +       V+  +LI+GLCK+  + +A + F  +      P+V  Y+ 
Sbjct: 292 VDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYST 351

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL-KNRMTEV 179
            +DGLC+ + +++AR +   +  +   PD   YTALI G        EA  + +  M   
Sbjct: 352 FMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAA 411

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           G   +      LV G    G L EAR LF   + RG+ PD
Sbjct: 412 GCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPD 451



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           L    I  LC     + ++    E+K+     NTV    L++A+ K     EA+ L  EM
Sbjct: 68  LVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEM 127

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
                  +  T+  LI GLC+   + EA  ++ R+   G   +   Y  L+DG CK + +
Sbjct: 128 KAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRV 187

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  L +E+  R  +  +  Y  +ID   K     EA    NRM + GV      +T L
Sbjct: 188 PEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVL 247

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           + GL +   +  A+ +F   +  G  P  ++C  L+    + G +DEA  +   M  RG
Sbjct: 248 IDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRG 306



 Score = 66.6 bits (161), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 36/184 (19%)

Query: 19  GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
           G C     +++  +   M   G T N V C  L++   KA   S+A  + +E++  + + 
Sbjct: 285 GFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKP 344

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK----------- 127
            VVT+   +DGLC++  V +A      + D G  P+V +YTALI GLC            
Sbjct: 345 DVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVF 404

Query: 128 ------KNC-------------------IERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
                   C                   ++ AR LF    +R + PD   ++A+ +   K
Sbjct: 405 EVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANNTAK 464

Query: 163 HESF 166
            E +
Sbjct: 465 TEGW 468


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 133/292 (45%), Gaps = 35/292 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  + ++I GLC   +++  + L  EM   G+  N +   T+MD+  K G 
Sbjct: 356 MVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGR 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA    D+++   ++  VV++ +LIDG C  G + E+I   GRM   GL P+   Y+A
Sbjct: 416 VLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSA 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK   ++ A  L+ EM  +D+ P+   Y  ++ G         A     ++ + G
Sbjct: 476 LLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSG 535

Query: 181 VDLDLNAY-----------------------------------TSLVWGLSRCGHLQEAR 205
           + L +N Y                                     ++ GL + G + +A+
Sbjct: 536 IQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAK 595

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSKN 257
            LF  ++  G++PD I+   +++ H E G ++E+ EL   M   G  + S+ 
Sbjct: 596 SLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRT 647



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 111/220 (50%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           EM++ G + N V  TT++D   KAG   +A+S   +M+   +   ++TF  LI GLC  G
Sbjct: 320 EMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIG 379

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
             ++       M + G+HPN      ++D LCK+  +  A + FD++    + PD  +YT
Sbjct: 380 EWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYT 439

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            LIDGY       E++ L  RM  +G+  D   Y++L+ G  + G + +A  L+ EM  +
Sbjct: 440 ILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSK 499

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
            + P+ I    +L   +  G +  A E   +++  G+  G
Sbjct: 500 DVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLG 539



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 2/248 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G+N   D   Y T++ G   +    D   LL+ M ++G+     +   L+ AY K    
Sbjct: 254 RGQN--PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETL 311

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +A++   EM        VVT+  +ID LCK+G V +A+ +F +M   GL P++  +T+L
Sbjct: 312 DKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSL 371

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I GLC     ++   L  EM  R + P+      ++D   K     EA +  +++  VGV
Sbjct: 372 IHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGV 431

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D+ +YT L+ G    G + E+  L   M+  G+ PD +   +LL  + + G +D+A+ 
Sbjct: 432 KPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALA 491

Query: 242 LQNEMMGR 249
           L  EM  +
Sbjct: 492 LYREMFSK 499



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 104/216 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    ++  Y T+I  LC   + ED+    S+M   GL+ + +  T+L+      GE
Sbjct: 321 MRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGE 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L  EM++  I    +    ++D LCK G V EA D+F ++   G+ P+V  YT 
Sbjct: 381 WKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTI 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ +  L   M    + PD   Y+AL++GY K+    +AL L   M    
Sbjct: 441 LIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKD 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           V  +   Y  ++ GL   G +  AR  + +++  GI
Sbjct: 501 VKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGI 536



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 26/272 (9%)

Query: 6   IKADLPLYGTIIWGLC--------IESKFEDSKLLLSEMKENGLT--ANTVICTTLMDAY 55
           +  D   +G +I   C        +E +   S+  +  M ++G     N +    +++  
Sbjct: 90  LATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGL 149

Query: 56  FKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKS----------------GLVREA 99
           FK GE  +A +L  EML       +VT+  +IDGLCK+                G + EA
Sbjct: 150 FKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEA 209

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +    +M   GL P+V  Y+ LID  CK      ARN+FD M +R   PD   Y  L+ G
Sbjct: 210 VRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHG 269

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           Y    +  +  +L   M + G+ L+ + +  L+   ++   L +A   F EM  +G  P+
Sbjct: 270 YATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPN 329

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   +++    + G +++A+   ++M+  GL
Sbjct: 330 VVTYTTVIDILCKAGRVEDAVSHFSQMVSEGL 361



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 122/267 (45%), Gaps = 16/267 (5%)

Query: 1   MKGKNIKADLPLYGTIIWGLC-----------IESKFEDSKL-----LLSEMKENGLTAN 44
           M G+    ++  Y ++I GLC           ++  F+  +L     LL +M   GL  +
Sbjct: 165 MLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPD 224

Query: 45  TVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG 104
            V  + L+D Y K G  +EA ++ D M+         T+  L+ G    G + +  D   
Sbjct: 225 VVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLA 284

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            M   G+     V+  LI    K   +++A   F EM ++   P+   YT +ID   K  
Sbjct: 285 LMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAG 344

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             ++A++  ++M   G+  D+  +TSL+ GL   G  ++   L  EMI RGI P+ I   
Sbjct: 345 RVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLN 404

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
           +++    + G + EA +  ++++  G+
Sbjct: 405 TIMDSLCKEGRVLEAHDFFDQIIHVGV 431



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 111/251 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  ++ D+  Y  +I   C   +  +++ +   M   G   +     TL+  Y   G 
Sbjct: 216 MSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGA 275

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   LL  M+   I +    F +LI    K+  + +A+  F  M   G  PNV  YT 
Sbjct: 276 LVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTT 335

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   +E A + F +M    + PD   +T+LI G      +K+   L   M   G
Sbjct: 336 VIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRG 395

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +     +++  L + G + EA   F ++I  G+ PD +    L+  +   G MDE+I
Sbjct: 396 IHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESI 455

Query: 241 ELQNEMMGRGL 251
           +L   M+  GL
Sbjct: 456 KLLGRMVSIGL 466



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 29/217 (13%)

Query: 64  ALSLLDEMLD---SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH-------- 112
           A+SL + M     +++     TF +LI   C  GL+  A++   R     +H        
Sbjct: 75  AVSLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYN 134

Query: 113 --PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES----- 165
             PNV  Y  +I+GL K+  +++A  LF EM  +   P+   Y ++IDG  K ++     
Sbjct: 135 CPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAE 194

Query: 166 -----------FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
                       +EA+ L  +M+  G+  D+  Y+ L+    + G   EAR +F  M+ R
Sbjct: 195 AVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRR 254

Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  PD     +LL  +  +G + +  +L   M+  G+
Sbjct: 255 GQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGI 291



 Score = 37.4 bits (85), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 35/202 (17%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+  +  Y  ++ GLC E+ F D                                  EAL
Sbjct: 536 IQLGINTYNIVLGGLC-ENSFVD----------------------------------EAL 560

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +   +     ++ V TF ++I GL K G + +A   F  +   GL P+  +Y  +I   
Sbjct: 561 RMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSH 620

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            ++  +E +  LF  M K     ++    A++   L+    + A     ++ E    ++ 
Sbjct: 621 IEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSVEA 680

Query: 186 NAYTSLVWGLSRCGHLQEARVL 207
           +    L+  +S   + +E + L
Sbjct: 681 STAVLLISIVSERKYQKEVKFL 702


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 124/240 (51%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  I+ G      F  +  +  +M   GL  + V    L+ A+ KAG   +AL +L+ +
Sbjct: 343 IYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENI 402

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
             +R+  T+ T+  ++DG  K G +++A++ F R+   GL P V  Y +L+ GL K   +
Sbjct: 403 QANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQM 462

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E AR + DEM    ++P+  +YTAL +GY +    ++A  +  RM +  + +D+ AY +L
Sbjct: 463 ENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGAL 522

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    + G +Q A  +F ++   G+  + I   ++L     +G + +A +L  +M   G 
Sbjct: 523 LKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGF 582



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 123/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +  + +L LY T++ G       E        +K  GL+        ++  + KAG 
Sbjct: 262 MEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGN 321

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++AL +L+EM    +    + + +++DG  + G    A   +  M   GL P++  Y  
Sbjct: 322 MAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNI 381

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   CK   +++A  + + +    ++P    YT+++DGY+K    ++AL + +R+   G
Sbjct: 382 LVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAG 441

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   + +Y SL+ GL++   ++ AR++  EM+  G++P+E    +L + +   G++++A 
Sbjct: 442 LRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAF 501

Query: 241 ELQNEM 246
            +   M
Sbjct: 502 GMFQRM 507



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 120/239 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG I+           +  +L EM ++G++ N +I   +MD Y + G+ + A  + ++M+
Sbjct: 309 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 368

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + ++  +VT+ +L+   CK+G + +A+     +    L P +  YT+++DG  K   I+
Sbjct: 369 SAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQ 428

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  +FD +    + P   +Y +L+ G  K    + A  + + M   GV  +  +YT+L 
Sbjct: 429 KALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALT 488

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G +R G +++A  +F  M    +  D +   +LLK   + G M  A+E+  ++   GL
Sbjct: 489 EGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGL 547



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 114/241 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K D+  Y  ++   C   + + +  +L  ++ N L       T+++D Y K G 
Sbjct: 367 MVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGH 426

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + D +  + +   VV++  L+ GL K+  +  A      M   G+ PN   YTA
Sbjct: 427 IQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTA 486

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L +G  +   +E+A  +F  M K ++  D  AY AL+    K  + + A+ +  ++T+ G
Sbjct: 487 LTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAG 546

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +++ G +R G L +AR L  +M   G   D I   S +K  +  G+ +E  
Sbjct: 547 LKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVT 606

Query: 241 E 241
           E
Sbjct: 607 E 607



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 107/227 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K   ++  +  Y +++ GL    + E+++L+L EM  NG+  N    T L + Y +AG+
Sbjct: 437 IKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGD 496

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +   M    + + +V +  L+   CKSG ++ A++ F ++ D GL  N   Y  
Sbjct: 497 VEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCT 556

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++DG  +K  + +AR+L  +M K     DT  YT+ I    +    +E       M E  
Sbjct: 557 MLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKK 616

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           ++++   YT+L+ G        +A   + +    G+  D  L   LL
Sbjct: 617 LEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLL 663



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 113/254 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ +  ++ +II G       E ++    + K   L    ++  +++ AY +AG 
Sbjct: 192 MLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGN 251

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL +M +   +  +  +  +++G  +     + + +F R+   GL P  A Y  
Sbjct: 252 METVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGC 311

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    K   + +A ++ +EM K  + P+   Y  ++DGY +   F  A  +   M   G
Sbjct: 312 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 371

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  LV    + G + +A  +   +    +LP      S+L  + + G++ +A+
Sbjct: 372 LKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKAL 431

Query: 241 ELQNEMMGRGLLSG 254
           E+ + +   GL  G
Sbjct: 432 EVFDRIKTAGLRPG 445



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 104/223 (46%)

Query: 29  SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLID 88
           ++     M+ + +  N  I T+L+ AY +A +   A++  +EML   I++    FC +I 
Sbjct: 150 ARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIIS 209

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           G   +G    A  +F +     L P   VY +++   C+   +E    L  +M +     
Sbjct: 210 GYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQG 269

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   YT +++G+ +    ++ L+  +R+   G+      Y  +V   ++ G++ +A  + 
Sbjct: 270 NLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDIL 329

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM   G+ P++++   ++  +   G+   A ++  +M+  GL
Sbjct: 330 EEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGL 372



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 48/252 (19%), Positives = 107/252 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +IK ++ +Y ++I         E +     EM   G+  N  +  +++  Y  AG 
Sbjct: 157 MRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGN 216

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A    ++     +    + +  ++   C++G +        +M + G   N+ +YT 
Sbjct: 217 NEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTT 276

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G  +    E+  + F  +    + P    Y  ++  + K  +  +AL++   M + G
Sbjct: 277 VLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHG 336

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  +   Y  ++ G +R G    A  ++ +M+  G+ PD +    L+    + G MD+A+
Sbjct: 337 VSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKAL 396

Query: 241 ELQNEMMGRGLL 252
            +   +    LL
Sbjct: 397 GVLENIQANRLL 408



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 90/201 (44%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+D Y + G+   A +  + M  S I+  V  +  LI    ++  +  A+     M   G
Sbjct: 137 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 196

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           +  N AV+ ++I G       E A + F++    +++P    Y +++  Y +  + +   
Sbjct: 197 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 256

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L  +M E G   +L  YT+++ G +     ++    FH +   G+ P       ++K  
Sbjct: 257 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLF 316

Query: 231 YERGNMDEAIELQNEMMGRGL 251
            + GNM +A+++  EM   G+
Sbjct: 317 TKAGNMAKALDILEEMDKHGV 337



 Score = 57.8 bits (138), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 72/173 (41%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +N+  D+  YG ++   C     + +  +  ++ + GL  N +   T++D + + GE
Sbjct: 507 MKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGE 566

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  LL +M      +  + +   I    +SG   E  +    M +  L  N   YT 
Sbjct: 567 LSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTT 626

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           LI G       ++A + +++     +  D+     L+ G +   S    L  K
Sbjct: 627 LIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSGLISCASQNSTLGEK 679



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 61/139 (43%)

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P +  Y  L+D   +      AR  F+ M    + P+   YT+LI  Y +    + A+  
Sbjct: 129 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 188

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M   G+ L+   + S++ G +  G+ + A   F +     ++P  I+  S+++ + +
Sbjct: 189 TEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQ 248

Query: 233 RGNMDEAIELQNEMMGRGL 251
            GNM+    L  +M   G 
Sbjct: 249 AGNMETVEALLAQMEEEGF 267


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K ++  YGT++ G   +    +   LL  M  NG+  N  + + L+ AY K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  +M    +    VT+  +I  LCKSG V +A+ YF +M D  L P   VY +
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC  +  ++A+ L  EM  R +  DT  + ++ID + K     E+  L + M  +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y++L+ G    G + EA  L   M+  G+ PD +   +L+  + +   M++A+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 570 VLFREMESSGV 580



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y +II  LC     + +  +L+ M +NG+  N     +++  Y  +G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L+D LCK+G   EA   F  M   GL P +  Y  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + P+   ++ LI  Y K     +A+ + ++M + G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y +++  L + G +++A   F +MI   + P  I+  SL+         D+A 
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 465 ELILEMLDRGI 475



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 125/253 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G +   D+  Y T+I G   E   + +     EM + G+  N V  ++++ A  KA    
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ +L  M+ + +     T+  ++ G C SG  +EAI +  +M   G+ P+V  Y +L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK      AR +FD M KR + P+ T Y  L+ GY    +  E   L + M   G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +   ++ L+   ++ G + +A ++F +M  +G+ PD +   +++    + G +++A+  
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 243 QNEMMGRGLLSGS 255
             +M+   L  G+
Sbjct: 432 FEQMIDERLSPGN 444



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 102/200 (51%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y ++I  LCI  K++ +K L+ EM + G+  +T+   +++D++ K G   E+  L D M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++  ++T+  LIDG C +G + EA      M   G+ P+   Y  LI+G CK + +
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  LF EM    + PD   Y  ++ G  +      A  L   +TE G  L+L+ Y  +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 192 VWGLSRCGHLQEARVLFHEM 211
           + GL +     EA  +F  +
Sbjct: 626 LHGLCKNNLTDEALRMFQNL 645



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y +++  LC   +  +++ +   M + GL        TL+  Y   G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD M+ + I      F +LI    K G V +A+  F +M   GL+P+   Y  
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK   +E A   F++M    + P    Y +LI      + + +A  L   M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD   + S++    + G + E+  LF  M+  G+ PD I   +L+  +   G MDEA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 241 ELQNEMMGRGL 251
           +L   M+  G+
Sbjct: 535 KLLASMVSVGM 545



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 98/208 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D   YGT+I  LC   + ED+     +M +  L+   ++  +L+ +     +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EMLD  I +  + F  +ID  CK G V E+   F  M   G+ P++  Y+ 
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L   M    M PD   Y  LI+GY K    ++AL L   M   G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  D+  Y  ++ GL +      A+ L+
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELY 607



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 102/219 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   + +II   C E +  +S+ L   M   G+  + +  +TL+D Y  AG+
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M+   ++   VT+  LI+G CK   + +A+  F  M   G+ P++  Y  
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GL +      A+ L+  + +     + + Y  ++ G  K+    EAL +   +    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           + L+   +  ++  L + G   EA+ LF  +   G++PD
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 113/234 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T+I G C+  K +++  LL+ M   G+  + V   TL++ Y K     +AL
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM  S +   ++T+ +++ GL ++     A + +  + + G    ++ Y  ++ GL
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N  + A  +F  +   D+  +T  +  +I   LK     EA +L   ++  G+  D+
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y+ +   L   G L+E   LF  M   G   +  +  S+++K  +RG++  A
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 3/214 (1%)

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           +T N      LM +   AG      + L  ++     V  + F  ++ GLC      +A+
Sbjct: 87  VTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAM 146

Query: 101 D-YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR--DMIPDTTAYTALI 157
           D    RM   G  PNV  Y  L+ GLC  N  + A  L   MP    D  PD  +YT +I
Sbjct: 147 DIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVI 206

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +G+ K     +A    + M + G+  ++  Y+S++  L +   + +A  +   M+  G++
Sbjct: 207 NGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVM 266

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           P+     S++  +   G   EAI    +M   G+
Sbjct: 267 PNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGV 300



 Score = 70.5 bits (171), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 94/204 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K D   Y T+I G C  S+ ED+ +L  EM+ +G++ + +    ++   F+   
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L   + +S  ++ + T+ +++ GLCK+ L  EA+  F  +    L      +  
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L K    + A++LF  +    ++PD   Y+ + +  ++    +E  +L   M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
              +     S+V  L + G +  A
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRA 743


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K ++  YGT++ G   +    +   LL  M  NG+  N  + + L+ AY K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  +M    +    VT+  +I  LCKSG V +A+ YF +M D  L P   VY +
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC  +  ++A+ L  EM  R +  DT  + ++ID + K     E+  L + M  +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y++L+ G    G + EA  L   M+  G+ PD +   +L+  + +   M++A+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 570 VLFREMESSGV 580



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y +II  LC     + +  +L+ M +NG+  N     +++  Y  +G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L+D LCK+G   EA   F  M   GL P +  Y  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + P+   ++ LI  Y K     +A+ + ++M + G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y +++  L + G +++A   F +MI   + P  I+  SL+         D+A 
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 465 ELILEMLDRGI 475



 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 125/253 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G +   D+  Y T+I G   E   + +     EM + G+  N V  ++++ A  KA    
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ +L  M+ + +     T+  ++ G C SG  +EAI +  +M   G+ P+V  Y +L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK      AR +FD M KR + P+ T Y  L+ GY    +  E   L + M   G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +   ++ L+   ++ G + +A ++F +M  +G+ PD +   +++    + G +++A+  
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 243 QNEMMGRGLLSGS 255
             +M+   L  G+
Sbjct: 432 FEQMIDERLSPGN 444



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 102/200 (51%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y ++I  LCI  K++ +K L+ EM + G+  +T+   +++D++ K G   E+  L D M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++  ++T+  LIDG C +G + EA      M   G+ P+   Y  LI+G CK + +
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  LF EM    + PD   Y  ++ G  +      A  L   +TE G  L+L+ Y  +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 192 VWGLSRCGHLQEARVLFHEM 211
           + GL +     EA  +F  +
Sbjct: 626 LHGLCKNNLTDEALRMFQNL 645



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y +++  LC   +  +++ +   M + GL        TL+  Y   G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD M+ + I      F +LI    K G V +A+  F +M   GL+P+   Y  
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK   +E A   F++M    + P    Y +LI      + + +A  L   M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD   + S++    + G + E+  LF  M+  G+ PD I   +L+  +   G MDEA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 241 ELQNEMMGRGL 251
           +L   M+  G+
Sbjct: 535 KLLASMVSVGM 545



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 98/208 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D   YGT+I  LC   + ED+     +M +  L+   ++  +L+ +     +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EMLD  I +  + F  +ID  CK G V E+   F  M   G+ P++  Y+ 
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L   M    M PD   Y  LI+GY K    ++AL L   M   G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  D+  Y  ++ GL +      A+ L+
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELY 607



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 102/219 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   + +II   C E +  +S+ L   M   G+  + +  +TL+D Y  AG+
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M+   ++   VT+  LI+G CK   + +A+  F  M   G+ P++  Y  
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GL +      A+ L+  + +     + + Y  ++ G  K+    EAL +   +    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           + L+   +  ++  L + G   EA+ LF  +   G++PD
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 113/234 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T+I G C+  K +++  LL+ M   G+  + V   TL++ Y K     +AL
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM  S +   ++T+ +++ GL ++     A + +  + + G    ++ Y  ++ GL
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N  + A  +F  +   D+  +T  +  +I   LK     EA +L   ++  G+  D+
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y+ +   L   G L+E   LF  M   G   +  +  S+++K  +RG++  A
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 3/197 (1%)

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID-YFGRMPDFGLHPNVA 116
           AG      + L  ++     V  + F  L+ GLC      +A+D    RM   G  PNV 
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKR--DMIPDTTAYTALIDGYLKHESFKEALNLKN 174
            Y  L+ GLC +N  + A  L   MP    D  PD  +YT +I+G+ K     +A    +
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M + G+  ++  Y+S++  L +   + +A  +   M+  G++P+     S++  +   G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 235 NMDEAIELQNEMMGRGL 251
              EAI    +M   G+
Sbjct: 284 QPKEAIGFLKKMHSDGV 300



 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 94/204 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K D   Y T+I G C  S+ ED+ +L  EM+ +G++ + +    ++   F+   
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L   + +S  ++ + T+ +++ GLCK+ L  EA+  F  +    L      +  
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L K    + A++LF  +    ++PD   Y+ + +  ++    +E  +L   M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
              +     S+V  L + G +  A
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRA 743


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 121/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G       ++   L S M  +G+  +    + L++   K  +  +A  L DEML
Sbjct: 161 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 220

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +    VTF  LIDG CK+G V  A++ + +M    L P++  Y  LI GLCKK  ++
Sbjct: 221 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 280

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A +L DEM  +++ PD   YT LIDG  K      A   + RM +  + LD  AYT+L+
Sbjct: 281 QAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALI 340

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL + G   +A  +  EM+  G+ PD      ++ +  ++G++ +  +L  EM   G
Sbjct: 341 SGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDG 398



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 118/235 (50%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G  A+      LM  + K G+   A S+ D + 
Sbjct: 103 YFKLVWGF------------YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAIT 150

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV++  L++G  + G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 151 KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMD 210

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM  + ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 211 DANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 270

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A  L  EM  + + PD+I   +L+    + G++D A E +  M+
Sbjct: 271 YGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMI 325



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 106/221 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK +D+  L  EM   GL  N V  TTL+D + K G 
Sbjct: 184 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 243

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A      M    L P+   YT 
Sbjct: 244 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTT 303

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  ++ A      M + ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 304 LIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVG 363

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   YT ++    + G + +   L  EM   G +P  +
Sbjct: 364 LKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 404



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 75/159 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +++  DL  Y T+I+GLC +   + +  L+ EM    L  + +  TTL+D   K G+
Sbjct: 254 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGD 313

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A      M+   I +  V +  LI GLC+ G   +A      M + GL P+   YT 
Sbjct: 314 LDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTM 373

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +I+  CKK  + +   L  EM +   +P    Y  L++G
Sbjct: 374 IINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 104/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 51  SDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 110

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK   I  A+++FD + K  + P   +Y  L++GY++
Sbjct: 111 YEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 170

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   GV  D+  Y+ L+ GL +   + +A  LF EM+ +G++P+ + 
Sbjct: 171 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 230

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 231 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 259


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 119/247 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K I  D+  + ++I GLC+      +  L  EM+  G   +      L+D+    G+
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL++L +M  S    +V+T+  LIDG CK+  +REA + F  M   G+  N   Y  
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNT 510

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  L D+M      PD   Y +L+  + +    K+A ++   MT  G
Sbjct: 511 LIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+  Y +L+ GL + G ++ A  L   +  +GI         +++  + +    EAI
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAI 630

Query: 241 ELQNEMM 247
            L  EM+
Sbjct: 631 NLFREML 637



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 124/277 (44%), Gaps = 36/277 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK D+  +  +I  LC   +   + L+L +M   GL  +    TT+M  Y + G+   AL
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGAL 244

Query: 66  SLLDEMLD-----SRIEVTVV-------------------------------TFCVLIDG 89
            + ++M++     S + V V+                               TF  L++G
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           LCK+G V+ AI+    M   G  P+V  Y ++I GLCK   ++ A    D+M  RD  P+
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPN 364

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
           T  Y  LI    K    +EA  L   +T  G+  D+  + SL+ GL    + + A  LF 
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           EM  +G  PDE     L+     +G +DEA+ +  +M
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 112/241 (46%), Gaps = 1/241 (0%)

Query: 16  IIWGLCIESKFEDSKLLLSEMK-ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           I+ G C E + ED+   + EM  ++G   +     TL++   KAG    A+ ++D ML  
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
             +  V T+  +I GLCK G V+EA+++  +M      PN   Y  LI  LCK+N +E A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L   +  + ++PD   + +LI G     + + A+ L   M   G + D   Y  L+  
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           L   G L EA  +  +M   G     I   +L+    +   + EA E+ +EM   G+   
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRN 504

Query: 255 S 255
           S
Sbjct: 505 S 505



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 109/242 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I GLC   + +++   L +M     + NTV   TL+    K  +  EA  L 
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    I   V TF  LI GLC +   R A++ F  M   G  P+   Y  LID LC K
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A N+  +M           Y  LIDG+ K    +EA  + + M   GV  +   Y
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTY 508

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ GL +   +++A  L  +MI  G  PD+    SLL      G++ +A ++   M  
Sbjct: 509 NTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTS 568

Query: 249 RG 250
            G
Sbjct: 569 NG 570



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 109/239 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I  LC E++ E++  L   +   G+  +     +L+           A+ L +EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E    T+ +LID LC  G + EA++   +M   G   +V  Y  LIDG CK N I 
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIR 487

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +FDEM    +  ++  Y  LIDG  K    ++A  L ++M   G   D   Y SL+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLL 547

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               R G +++A  +   M   G  PD +   +L+    + G ++ A +L   +  +G+
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 109/238 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ GLC     + +  ++  M + G   +     +++    K GE  EA+  LD+M+
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI 357

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   VT+  LI  LCK   V EA +    +   G+ P+V  + +LI GLC      
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM  +   PD   Y  LID         EALN+  +M   G    +  Y +L+
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   ++EA  +F EM   G+  + +   +L+    +   +++A +L ++M+  G
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEG 535



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 4/244 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G C  +K  +++ +  EM+ +G++ N+V   TL+D   K+    +A  L+D+M+
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +    T+  L+   C+ G +++A D    M   G  P++  Y  LI GLCK   +E
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG-VDLDLNAYTSL 191
            A  L   +  + +     AY  +I G  +     EA+NL   M E      D  +Y  +
Sbjct: 593 VASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652

Query: 192 VWGLSR-CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA-IELQNEMMGR 249
             GL    G ++EA     E++ +G +P E   + +L +     +M+E  ++L N +M +
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFVP-EFSSLYMLAEGLLTLSMEETLVKLVNMVMQK 711

Query: 250 GLLS 253
              S
Sbjct: 712 ARFS 715



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 117/251 (46%), Gaps = 2/251 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K  N   +  LY  I+  L     F+D + +L +MK +G    T     L+++Y +    
Sbjct: 75  KKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQ 134

Query: 62  SEALSLLDEMLDS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            E L ++  M+D   ++     +  +++ L     ++       +M  +G+ P+V+ +  
Sbjct: 135 DEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNV 194

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC+ + +  A  + ++MP   ++PD   +T ++ GY++      AL ++ +M E G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFG 254

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLLKKHYERGNMDEA 239
                 +   +V G  + G +++A     EM  + G  PD+    +L+    + G++  A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 240 IELQNEMMGRG 250
           IE+ + M+  G
Sbjct: 315 IEIMDVMLQEG 325



 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 4/172 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D+  YGT+I GLC   + E +  LL  ++  G+         ++   F+  +
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRK 625

Query: 61  PSEALSLLDEMLD-SRIEVTVVTFCVLIDGLCK-SGLVREAIDYFGRMPDFGLHPNVAVY 118
            +EA++L  EML+ +      V++ ++  GLC   G +REA+D+   + + G  P  +  
Sbjct: 626 TTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSL 685

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             L +GL   +  E    L + + ++    +     +++ G LK   F++AL
Sbjct: 686 YMLAEGLLTLSMEETLVKLVNMVMQKARFSEEE--VSMVKGLLKIRKFQDAL 735


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 111/227 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I   +  YG II  L  +      + LL EM+  GL+ N  I  T+++A  K   
Sbjct: 142 METKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRS 201

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  +L++M+ SR    VVTF  +I G C+ G VREA+         GL PN   YT 
Sbjct: 202 ASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTP 261

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C +     A +L  EM  R   PD     ALI G +      +AL ++ +M E  
Sbjct: 262 LIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQ 321

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           V  D N Y  L+ GL +   L  A+ L  EM+ + + PD+ +  +L+
Sbjct: 322 VMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLI 368



 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 1/249 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+  + T+I G C E    ++  LL E    GL  N +  T L+  +   GE
Sbjct: 212 MVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGE 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  LL EM+       ++T   LI GL  SG V +A+    +M +  + P+  +Y  
Sbjct: 272 AMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNV 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCKK  +  A+NL +EM ++ + PD   YT LIDG+++ +   +A  +   M E  
Sbjct: 332 LISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA 391

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+ AY  ++ G  + G ++EA      M   G +PDE    +L+  + ++G++  ++
Sbjct: 392 CP-DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASL 450

Query: 241 ELQNEMMGR 249
            L  +MM R
Sbjct: 451 RLLCDMMKR 459



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 114/238 (47%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
            ++ GLC+E + E+ + L+      G     V    L+D Y + G+    L LL EM   
Sbjct: 86  VMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETK 145

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            I  TVVT+  +I  L + G + +     G M   GL PNV +Y  +I+ LCK     +A
Sbjct: 146 GIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQA 205

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            ++ ++M K    PD   +  +I G+ +    +EAL L       G++ +  +YT L+ G
Sbjct: 206 SDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHG 265

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               G    A  L  EM+GRG  PD I   +L+      G +++A+ ++ +M  R ++
Sbjct: 266 FCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVM 323



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 111/234 (47%), Gaps = 15/234 (6%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I G C     +++   +S M++ G   +    TTL+D Y K G+ S +L LL
Sbjct: 394 DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLL 453

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+  R +  + T+  LI G C  G    A D F +M   GL PNV  YT LI  L KK
Sbjct: 454 CDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKK 513

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYL--------------KHESFKEA-LNLK 173
           + + +A   F+ M      P+      L++G +              K    K A L++ 
Sbjct: 514 DKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVF 573

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
             +   G+D  ++AY ++++ L R   L +A  L  +M  +G LPD I  +SLL
Sbjct: 574 RGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLL 627



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C+  +   +  LL EM   G T + +    L+     +G+ ++AL + ++M 
Sbjct: 259 YTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMA 318

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + ++      + VLI GLCK  ++  A +    M +  + P+  +YT LIDG  + + + 
Sbjct: 319 ERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLS 378

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR +F+ M ++   PD  AY  +I GY K    KEA+   + M + G   D   YT+LV
Sbjct: 379 DARKIFEFMEEK-ACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLV 437

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            G ++ G +  +  L  +M+ R   P+     SL+  +   G+   A +L  +M   GL 
Sbjct: 438 DGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLF 497



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 1/220 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D  +Y  +I GLC +     +K LL EM E  +  +  I TTL+D + ++ +
Sbjct: 317 MAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDK 376

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  +  E ++ +    +V + V+I G CK G+++EA+     M   G  P+   YT 
Sbjct: 377 LSDARKIF-EFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTT 435

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG  KK  I  +  L  +M KR   P+   Y +LI GY        A +L  +M   G
Sbjct: 436 LVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEG 495

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  ++  YT L+  L +   + +A   F  M+     P++
Sbjct: 496 LFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPND 535



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 5/233 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+    D+   G +I GL +  +  D+ ++  +M E  +  +  I   L+    K   
Sbjct: 282 MMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRM 341

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A +LL+EML+ +++     +  LIDG  +S  + +A   F  M +    P++  Y  
Sbjct: 342 LSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNV 400

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G CK   ++ A      M K   IPD   YT L+DGY K      +L L   M +  
Sbjct: 401 MIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRR 460

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKK 229
              ++  Y SL+ G    G    A  LF +M   G+ P+     +L  SL KK
Sbjct: 461 CKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKK 513



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 93/223 (41%), Gaps = 35/223 (15%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE----------------AIDY---- 102
            A  L  EML         + CV++ GLC  G V E                A+ Y    
Sbjct: 64  RARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLI 123

Query: 103 ---------------FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
                           G M   G+ P V  Y A+I  L +K  + +  +L  EM  R + 
Sbjct: 124 DGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLS 183

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
           P+   Y  +I+   K  S  +A ++ N+M +   + D+  + +++ G  R G ++EA  L
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKL 243

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             E I RG+ P+++    L+     RG    A +L  EMMGRG
Sbjct: 244 LREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRG 286



 Score = 68.2 bits (165), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 15/175 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K ++  Y ++I G C       ++ L ++M+  GL  N V  T L+ + FK  +
Sbjct: 456 MMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDK 515

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGL--CKSGLVREA-------------IDYFGR 105
             +A +  + ML +       T   L++GL  C+ G+V                +D F  
Sbjct: 516 VIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRG 575

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           +   GL P ++ Y A+I  LC+ N + +A +L D+M  +  +PD   + +L+ G+
Sbjct: 576 LISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGF 630


>gi|358346363|ref|XP_003637238.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503173|gb|AES84376.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 45/281 (16%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+    +I++G C   K  ++ +L  EM E GL  N V   T++++ FK+G   EA 
Sbjct: 6   IMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAF 65

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  +M+   I   +VT   ++DGL K G  +EA + F  +    L PN   Y+AL+DG 
Sbjct: 66  NLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGY 125

Query: 126 C-----------------------------------KKNCIERARNLFDEMPKRDMIPDT 150
           C                                   KK  + +A ++  EM +R+++P+T
Sbjct: 126 CKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT 185

Query: 151 TAYTALIDGYLKHESFKEALNL-----KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             Y  LIDGY K      A +        R+ E  V  D+     L+  L R G + EAR
Sbjct: 186 IVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDI-----LLNNLKRVGRMDEAR 240

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            L  +M  +GI PD +   SL+  +++ GN   A+ +  EM
Sbjct: 241 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM 281



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 130/271 (47%), Gaps = 20/271 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + ++    ++  ++  L    + ++++ L+ +M   G+  + V   +L+D YFK G 
Sbjct: 211 MKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 270

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL--------------------VREAI 100
              ALS++ EM +  I   VV +  LI GL + G                       +A+
Sbjct: 271 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDAL 330

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
           D    M  +G+ PN   Y  LI GLCK   +E+A +  DEM   + +P    +  L+  Y
Sbjct: 331 DILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAY 390

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            + E   + L +  ++   G++L L  Y +L+    R G  ++A+V+  EM+ RGI  D 
Sbjct: 391 SRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADL 450

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   +L++ +    ++++A++  ++M   G+
Sbjct: 451 VTYNALIRGYCTGSHVEKALKTYSQMFVDGI 481



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 125/251 (49%), Gaps = 15/251 (5%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+  +   Y  ++ G C   K E ++L+L +M++  +  N +  +++++ Y K G  S+A
Sbjct: 110 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 169

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + +L EM+   +    + + +LIDG  K+G    A D+   M    L  +  ++  L++ 
Sbjct: 170 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNN 229

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L +   ++ AR+L  +M  + + PD   Y +LIDGY K  +   AL++   M E  +  D
Sbjct: 230 LKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFD 289

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           + AY +L+ GL R G   + R +   MI  G+ PD   C             ++A+++ N
Sbjct: 290 VVAYNALIKGLLRLGK-YDPRYVCSRMIELGLAPD---C-----------KTEDALDILN 334

Query: 245 EMMGRGLLSGS 255
           EM   G++  +
Sbjct: 335 EMKSYGIMPNA 345



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 115/213 (53%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           NG+  + V C++++  + + G+ +EA  L  EM +  ++   V++  +I+ L KSG V E
Sbjct: 4   NGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVME 63

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           A +   +M   G+  ++   T ++DGL K    + A  +F+ + K ++ P+   Y+AL+D
Sbjct: 64  AFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLD 123

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           GY K    + A  +  +M +  V  ++  ++S++ G ++ G L +A  +  EM+ R ++P
Sbjct: 124 GYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMP 183

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + I+   L+  +++ G  D A +   EM  R L
Sbjct: 184 NTIVYAILIDGYFKAGEQDVADDFCKEMKSRRL 216



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 20/271 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +++  ++  + +II G   +     +  +L EM +  +  NT++   L+D YFKAGE
Sbjct: 141 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 200

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM   R+E + V F +L++ L + G + EA      M   G+ P++  Y +
Sbjct: 201 QDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 260

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF-------------- 166
           LIDG  K+     A ++  EM ++++  D  AY ALI G L+   +              
Sbjct: 261 LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGL 320

Query: 167 ------KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
                 ++AL++ N M   G+  +   Y  L+ GL + G +++A     EM+    +P  
Sbjct: 321 APDCKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTP 380

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I    L+K +      D+ +++  +++  GL
Sbjct: 381 ITHKFLVKAYSRSEKADKILQIHEKLVASGL 411



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 123/276 (44%), Gaps = 24/276 (8%)

Query: 1   MKGKNIKADLPLYGTII--------------------WGLCIESKFEDSKLLLSEMKENG 40
           MK KNI+ D+  Y  +I                     GL  + K ED+  +L+EMK  G
Sbjct: 281 MKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCKTEDALDILNEMKSYG 340

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           +  N V    L+    K G   +A S LDEML      T +T   L+    +S    + +
Sbjct: 341 IMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKIL 400

Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
               ++   GL  ++ VY  LI   C+     +A+ + DEM KR +  D   Y ALI GY
Sbjct: 401 QIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGY 460

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG----HLQEARVLFHEMIGRGI 216
                 ++AL   ++M   G+  ++  Y +L+ GLS  G     ++E   L  EM  RG+
Sbjct: 461 CTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGL 520

Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +P+      L+  +   GN  + I L  EM+ +G +
Sbjct: 521 VPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFV 556



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 121/259 (46%), Gaps = 4/259 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I  +   Y  +I GLC     E ++  L EM         +    L+ AY ++ +
Sbjct: 336 MKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEK 395

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L + ++++ S +E+++  +  LI   C+ G+ R+A      M   G+  ++  Y A
Sbjct: 396 ADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNA 455

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY----LKHESFKEALNLKNRM 176
           LI G C  + +E+A   + +M    + P+ T Y  L+ G     L  E  +E   L + M
Sbjct: 456 LIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEM 515

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            E G+  +   Y  LV G  R G+ ++  +L  EMI +G +P       L+  + + G M
Sbjct: 516 NERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKM 575

Query: 237 DEAIELQNEMMGRGLLSGS 255
            EA EL N+++ +G +  S
Sbjct: 576 IEARELLNDLLTKGRIPNS 594



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 9/222 (4%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           +GL  +  +  TL+  + + G   +A  +LDEM+   I   +VT+  LI G C    V +
Sbjct: 409 SGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEK 468

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR----NLFDEMPKRDMIPDTTAYT 154
           A+  + +M   G+ PN+  Y  L+ GL     +E        L  EM +R ++P+   Y 
Sbjct: 469 ALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYD 528

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            L+ GY +  + K+ + L   M   G    L  Y  L+   ++ G + EAR L ++++ +
Sbjct: 529 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTK 588

Query: 215 GILPD----EILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G +P+    +IL    L   YE   +D +++   E+  + LL
Sbjct: 589 GRIPNSFTYDILTCGWLNLSYE-PEIDRSLKRSYEIEVKKLL 629



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 88/176 (50%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           VVT   ++ G C+ G + EA   F  M + GL PN   Y  +I+ L K   +  A NL  
Sbjct: 10  VVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQS 69

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           +M  R +  D    T ++DG  K    KEA  +   + ++ +  +   Y++L+ G  + G
Sbjct: 70  QMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLG 129

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            ++ A ++  +M    + P+ I   S++  + ++G + +A+++  EM+ R ++  +
Sbjct: 130 KMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT 185



 Score = 41.6 bits (96), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 41/93 (44%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L+SEM E GL  N      L+  Y + G   + + L  EM+      T+ T+ VLI    
Sbjct: 511 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 570

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           KSG + EA +    +   G  PN   Y  L  G
Sbjct: 571 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 603


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 126/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ D   Y ++I GLC   +++D+  ++S M +  +  +      L+DA  K G 
Sbjct: 212 MEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  L +EM+   ++  +VT+ +LI GLC    + EA   FG M   G  P+V  Y+ 
Sbjct: 272 ISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSI 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK   +E    LF EM +R ++ +T  YT LI GY +      A  +   M   G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCG 391

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y  L+ GL   G +++A V+  +M   G+  D +    +++   + G + +A 
Sbjct: 392 VPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAW 451

Query: 241 ELQNEMMGRGL 251
           +L   +  +GL
Sbjct: 452 DLYCSLNLKGL 462



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%)

Query: 20  LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
            C  S+   +   L +M + G   + V   +L++ + +     +AL + D M++   E  
Sbjct: 126 FCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPN 185

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           VV +  +IDGLCKS  V  A+D   RM   G+ P+   Y +LI GLC     + A  +  
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVS 245

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
            M KR++ PD   + ALID  +K     EA  L   M    +D D+  Y+ L++GL    
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYS 305

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            L EA  +F  M+ +G  PD +    L+  + +   ++  ++L  EM  RG++  +
Sbjct: 306 RLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361



 Score =  112 bits (280), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 121/245 (49%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++ +Y TII GLC   + +++  LL+ M+ +G+  + V   +L+     +G   +A  
Sbjct: 183 EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR 242

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           ++  M    I   V TF  LID   K G + EA + +  M    L P++  Y+ LI GLC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLC 302

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
             + ++ A  +F  M  +   PD   Y+ LI+GY K +  +  + L   M++ GV  +  
Sbjct: 303 MYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTV 362

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YT L+ G  R G L  A  +F  M+  G+ P+ I    LL    + G +++A+ +  +M
Sbjct: 363 TYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADM 422

Query: 247 MGRGL 251
              G+
Sbjct: 423 QKSGM 427



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 110/220 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +++  D+  Y  +I+GLC+ S+ ++++ +   M   G   + V  + L++ Y K+ +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKK 341

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + L  EM    +    VT+ VLI G C++G +  A + F  M   G+ PN+  Y  
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNV 401

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC    IE+A  +  +M K  M  D   Y  +I G  K     +A +L   +   G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKG 461

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           +  D+  YT+++ GL + G   EA  LF +M   GILP+E
Sbjct: 462 LTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 116/245 (47%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D+  +G+++ G C   +  D+  +   M E G   N VI  T++D   K+ +   AL 
Sbjct: 148 EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALD 207

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL+ M    I    VT+  LI GLC SG   +A      M    ++P+V  + ALID   
Sbjct: 208 LLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACV 267

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K+  I  A  L++EM +R + PD   Y+ LI G   +    EA  +   M   G   D+ 
Sbjct: 268 KEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVV 327

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y+ L+ G  +   ++    LF EM  RG++ + +    L++ +   G ++ A E+   M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387

Query: 247 MGRGL 251
           +  G+
Sbjct: 388 VFCGV 392



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 104/227 (45%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +DS  L   M +     +    + L+ A  K  +    + L ++M    I   + T  
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +L++  C+   +  A+ + G+M   G  P++  + +L++G C+ + I  A  +FD M + 
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              P+   Y  +IDG  K +    AL+L NRM   G+  D   Y SL+ GL   G   +A
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +   M  R I PD     +L+    + G + EA EL  EM+ R L
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL 287


>gi|255584082|ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527472|gb|EEF29603.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 487

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +I  D+  Y ++I G        +S  L  EM   G+  +     TLM  +FK G+
Sbjct: 98  MREASISPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMHCFFKLGK 157

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L ++    +     TF ++I+GLCK+G    A+  F  +   G  P +  Y  
Sbjct: 158 AEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNI 217

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLCK   +  AR++  E+     +P+   YT ++    +   FK+ L +   M + G
Sbjct: 218 LINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKG 277

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D  AY ++V  L + G L+EA     +MI  GI  D     +L+  + ++GN++ A 
Sbjct: 278 YTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNTLINLYCKQGNLEAAY 337

Query: 241 ELQNEMMGRGL 251
           +L +E+   GL
Sbjct: 338 QLLDEIEKEGL 348



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 100/214 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K       L  Y  +I GLC + +   ++ +L E++ +G   N +  TT+M   F++  
Sbjct: 203 LKQHGFVPQLITYNILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRR 262

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + L +L EM+D         +C ++  L K+G + EA +Y  +M   G+  ++A Y  
Sbjct: 263 FKQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDLASYNT 322

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+  CK+  +E A  L DE+ K  +  D   +T LI+   K  +   A      M  +G
Sbjct: 323 LINLYCKQGNLEAAYQLLDEIEKEGLQCDEYTHTILINWMCKAGNILGARRHMQHMNMMG 382

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            D  L A   +V GL + G +  A  LF  M  R
Sbjct: 383 FDSCLVALNCMVDGLCKNGQIDHAVKLFESMKMR 416



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 111/234 (47%)

Query: 17  IWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
           I  LC   +   ++ ++ +    G+  + V   TL+DAY +    + A SLL+ M ++ I
Sbjct: 44  IASLCKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNAAYSLLNRMREASI 103

Query: 77  EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
              VVT+  LI G  ++ L+ E+++ F  M + G+ P+V  Y  L+    K    E A  
Sbjct: 104 SPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMHCFFKLGKAEEANE 163

Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
           +  ++    + P  T +  +I+G  K+     AL L   + + G    L  Y  L+ GL 
Sbjct: 164 VLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNALMLFRSLKQHGFVPQLITYNILINGLC 223

Query: 197 RCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +   L+ AR +  E+   G +P+ I   +++K  +      + +E+  EM+ +G
Sbjct: 224 KDRRLRAARSMLKELETSGYVPNAITYTTVMKFCFRSRRFKQGLEILQEMIDKG 277



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 69/130 (53%)

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I  LCK   + +A ++  +  +  ++PD   Y  LID Y +  SF  A +L NRM E  +
Sbjct: 44  IASLCKAKELNKAESVIIDGIRLGVLPDVVTYNTLIDAYSRFVSFNAAYSLLNRMREASI 103

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D+  Y SL+ G +R   L E+  LF EM+  GI+PD     +L+   ++ G  +EA E
Sbjct: 104 SPDVVTYNSLIAGAARNCLLLESLNLFDEMLNMGIVPDVWSYNTLMHCFFKLGKAEEANE 163

Query: 242 LQNEMMGRGL 251
           +  ++ G GL
Sbjct: 164 VLRQIFGHGL 173



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 95/215 (44%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+  Y T++       K E++  +L ++  +GL+        +++   K G  S AL
Sbjct: 138 IVPDVWSYNTLMHCFFKLGKAEEANEVLRQIFGHGLSPCPTTFNIMINGLCKNGFTSNAL 197

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L   +        ++T+ +LI+GLCK   +R A      +   G  PN   YT ++   
Sbjct: 198 MLFRSLKQHGFVPQLITYNILINGLCKDRRLRAARSMLKELETSGYVPNAITYTTVMKFC 257

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            +    ++   +  EM  +    D  AY  ++   +K    +EA     +M + G++ DL
Sbjct: 258 FRSRRFKQGLEILQEMIDKGYTFDGFAYCTVVGVLIKTGRLEEATEYMRQMIKNGIEHDL 317

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            +Y +L+    + G+L+ A  L  E+   G+  DE
Sbjct: 318 ASYNTLINLYCKQGNLEAAYQLLDEIEKEGLQCDE 352


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 121/244 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y +II GLC      ++K LL EM + G+  N V+   L+D+ FKAG   E+    
Sbjct: 190 DVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQ 249

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+   +   +V    LIDGL K+G   EA   F  +      PN   YTA+IDG CK 
Sbjct: 250 SQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKL 309

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A +L  +M K+ ++P+   Y+++I+GY K      A+ +  +M +  +  +   Y
Sbjct: 310 GDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIY 369

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G  + G    A  L++EM   G+  +  +  + +        M+EA  L   MM 
Sbjct: 370 ATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMS 429

Query: 249 RGLL 252
           +GLL
Sbjct: 430 KGLL 433



 Score =  115 bits (287), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 127/247 (51%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N++ +L  Y T+I   C +    ++  L  EM  +G   + V  +++++   K G  +EA
Sbjct: 151 NLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEA 210

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
            +LL EM    +    V + +L+D L K+G   E+  Y  +M   G+  ++ V T LIDG
Sbjct: 211 KALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDG 270

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L K    + A  +F  + K + IP+   YTA+IDGY K      A +L   M +  V  +
Sbjct: 271 LFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPN 330

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y+S++ G ++ G L  A  +  +M+ + I+P+  +  +L+  H + G  D A++L N
Sbjct: 331 VVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYN 390

Query: 245 EMMGRGL 251
           EM   GL
Sbjct: 391 EMKLNGL 397



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 1/243 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C     + ++ LL +M++  +  N V  +++++ Y K G    A+ ++ +ML
Sbjct: 299 YTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKML 358

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  I      +  LIDG  K+G    A+D +  M   GL  N  +  A I+ L +   +E
Sbjct: 359 DQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKME 418

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L   M  + ++ D   YT+L+DG+ K      A  +  +M E G+  D+ AY  L+
Sbjct: 419 EAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLI 478

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL R G   +A  ++  +   G+ PD     +++  + ++G ++ AI+L NEM G  ++
Sbjct: 479 NGLLRLGKY-DAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVM 537

Query: 253 SGS 255
             S
Sbjct: 538 PNS 540



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 118/254 (46%), Gaps = 8/254 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  +I  D   Y T IWG C +         LS M +     ++  C  L+  + + G 
Sbjct: 69  IRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGS 128

Query: 61  PSEALSLLDEMLD--------SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLH 112
                 ++D ++D        + +E  +VT+  LI   CK   + EA+  +  M   G  
Sbjct: 129 VKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFL 188

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P+V  Y+++I+GLCK+  +  A+ L  EM K  + P+   Y  L+D   K  S  E+   
Sbjct: 189 PDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIY 248

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
           +++M   GV  DL   T+L+ GL + G   EA  +F  +     +P+ I   +++  + +
Sbjct: 249 QSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCK 308

Query: 233 RGNMDEAIELQNEM 246
            G+MD A  L  +M
Sbjct: 309 LGDMDGAESLLRDM 322



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 117/247 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   Y T+I   C + K E++  L +EMK + +  N++ C  L+    KAGE   A+
Sbjct: 501 LAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAI 560

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +L+EML   I   V     L++   K       +    R+   GL  N  VY +LI  L
Sbjct: 561 DVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVL 620

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C     +RA  + + M K  +  DT  Y ALI G+ K    ++AL    +M   GV   +
Sbjct: 621 CGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGI 680

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ GL   G + +A  +  +M   G+ PD  L  +L+  H + GN  EAI+   E
Sbjct: 681 RTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCE 740

Query: 246 MMGRGLL 252
           M+ +GL+
Sbjct: 741 MVTKGLV 747



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 122/241 (50%), Gaps = 5/241 (2%)

Query: 16  IIWGLCIESKFE-----DSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           +++ + ++S F+     +S +  S+M   G++ + V+CTTL+D  FKAG+  EA ++   
Sbjct: 227 VVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCT 286

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           +         +T+  +IDG CK G +  A      M    + PNV  Y+++I+G  KK  
Sbjct: 287 LAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGM 346

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           ++ A  +  +M  ++++P+   Y  LIDG+LK      A++L N M   G++ +     +
Sbjct: 347 LDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDA 406

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +  L R   ++EA  L   M+ +G+L D +   SL+   ++ G    A  +  +M   G
Sbjct: 407 FINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETG 466

Query: 251 L 251
           +
Sbjct: 467 I 467



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 34/264 (12%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K E+++ L   M   GL  + V  T+LMD +FK G  S A ++ ++M ++ I+  VV + 
Sbjct: 416 KMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYN 475

Query: 85  VLIDGL----------------------------------CKSGLVREAIDYFGRMPDFG 110
           VLI+GL                                  CK G +  AI  +  M    
Sbjct: 476 VLINGLLRLGKYDAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHS 535

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           + PN      L+ GL K    ERA ++ +EM    + P+ T + AL++   K E     L
Sbjct: 536 VMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTIL 595

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            +  R+  +G+  +   Y SL+  L   G  + A ++ + M   GI  D +   +L+  H
Sbjct: 596 QMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGH 655

Query: 231 YERGNMDEAIELQNEMMGRGLLSG 254
           ++  ++++A+    +M+  G+  G
Sbjct: 656 FKSSHIEKALATYTQMLNEGVSPG 679



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 11/259 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  +I   LPL+  +I+             L SEM   G+  N      L+ A+ K G 
Sbjct: 2   IRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGH 61

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S AL L+  +    I+V  VT+   I G C+ GL  +   +   M       +      
Sbjct: 62  LSLALDLIRNV---DIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNI 118

Query: 121 LIDGLCKKNCIERAR----NLFDEMPKRD----MIPDTTAYTALIDGYLKHESFKEALNL 172
           L+ G C+   ++       NL D+M   D    + P+   YT LI  Y K     EAL+L
Sbjct: 119 LVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSL 178

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M   G   D+  Y+S++ GL + G L EA+ L  EM   G+ P+ ++   L+   ++
Sbjct: 179 YEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFK 238

Query: 233 RGNMDEAIELQNEMMGRGL 251
            G+  E+   Q++M+  G+
Sbjct: 239 AGSAWESFIYQSQMIVCGV 257



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 120/237 (50%), Gaps = 14/237 (5%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  +KA+  +Y ++I  LC     + + L+L+ M + G++A+TV    L+  +FK+    
Sbjct: 603 GMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIE 662

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +AL+   +ML+  +   + T+ +L+ GL  +GL+ +A +   +M D GL P+ ++Y  LI
Sbjct: 663 KALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLI 722

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G  K    + A   + EM  + ++P T+ Y  LI+ + K     +A  L N M    V 
Sbjct: 723 SGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVP 782

Query: 183 LDLNAYTSLVWG------------LSRCGHLQEARVLFHEMIGRGILPDE--ILCIS 225
            + + Y  L+ G            +S+  +  EAR LF EM  +G +P E  + CIS
Sbjct: 783 PNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNEKGFVPCENTLACIS 839



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K +  ++  Y +II G   +   + +  ++ +M +  +  N  I  TL+D + KAG+
Sbjct: 322 MEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGK 381

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L +EM  + +E         I+ L +   + EA      M   GL  +   YT+
Sbjct: 382 QDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTS 441

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG  K      A  + ++M +  +  D  AY  LI+G L+   + +A ++ + + E+G
Sbjct: 442 LMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELG 500

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +++    + G L+ A  L++EM G  ++P+ I C  L+    + G  + AI
Sbjct: 501 LAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAI 560

Query: 241 ELQNEMMGRGL 251
           ++ NEM+  G+
Sbjct: 561 DVLNEMLLWGI 571


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 123/246 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K D+  Y T+I  LC   K +D+    ++M + G+  +      L+  +   G 
Sbjct: 433 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 492

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ E++++ + + +V F  +I+ LCK G V +A + F    + GLHP+  VY+ 
Sbjct: 493 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 552

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C    +E+A  +FD M    + P+   Y  L++GY K     E L+L   M + G
Sbjct: 553 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 612

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y+ ++ GL + G    A++ FHEM   GI  D      +L+  ++    DEAI
Sbjct: 613 IKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 672

Query: 241 ELQNEM 246
            L  E+
Sbjct: 673 FLFKEL 678



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  DL  Y +++  LC     + ++  L +M    +  N      L+  Y   G+
Sbjct: 258 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 317

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM    I   VVT  +L+  LCK G ++EA D F  M   G +P+V  Y  
Sbjct: 318 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 377

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G   K C+    +LFD M    + PD   +  LI  Y       +A+ + N M + G
Sbjct: 378 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 437

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y +++  L R G + +A   F++MI +G+ PD+     L++     G++ +A 
Sbjct: 438 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 497

Query: 241 ELQNEMMGRGL 251
           EL +E+M  G+
Sbjct: 498 ELISEIMNNGM 508



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G   E     +  L  EM + G+  + V   +++ A  KA    +A + L +M+
Sbjct: 235 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 294

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + R+     T+  LI G   +G  +EA+  F  M    + P+V   + L+  LCK   I+
Sbjct: 295 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 354

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR++FD M  +   PD  +Y  +++GY       +  +L + M   G+  D   +  L+
Sbjct: 355 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 414

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              + CG L +A ++F+EM   G+ PD +   +++      G MD+A+E  N+M+ +G+
Sbjct: 415 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 473



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D   +  +I         + + ++ +EM+++G+  + V   T++ A  + G+
Sbjct: 398 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 457

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+   ++M+D  +      +  LI G C  G + +A +    + + G+H ++  +++
Sbjct: 458 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 517

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LCK   +  A+N+FD      + PD   Y+ L+DGY      ++AL + + M   G
Sbjct: 518 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 577

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y +LV G  + G + E   LF EM+ RGI P  IL   ++   ++ G    A 
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637

Query: 241 ELQNEMMGRGL 251
              +EM   G+
Sbjct: 638 MKFHEMTESGI 648



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 123/248 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + +II  LC   +  D++ +       GL  + V+ + LMD Y   G+  +AL + 
Sbjct: 511 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVF 570

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+ + IE  VV +C L++G CK G + E +  F  M   G+ P+  +Y+ +IDGL + 
Sbjct: 571 DAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQA 630

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A+  F EM +  +  D   Y  ++ G  K+  F EA+ L   +  + V +++   
Sbjct: 631 GRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 690

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ G+ +   ++EA+ LF  +    ++P+ +    ++    + G ++EA ++ + M  
Sbjct: 691 NTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQN 750

Query: 249 RGLLSGSK 256
            G    S+
Sbjct: 751 AGCEPNSR 758



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 119/242 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  +I G C       +K L+SE+  NG+  + V  +++++   K G 
Sbjct: 468 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 527

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A ++ D  ++  +    V + +L+DG C  G + +A+  F  M   G+ PNV VY  
Sbjct: 528 VMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCT 587

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK   I+   +LF EM +R + P T  Y+ +IDG  +      A    + MTE G
Sbjct: 588 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESG 647

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + +D+  Y  ++ GL +     EA  LF E+    +  + I   +++   ++   ++EA 
Sbjct: 648 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 707

Query: 241 EL 242
           +L
Sbjct: 708 DL 709



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG+N   D+  Y  ++ G   +    D   L   M  +G+  +      L+ AY   G 
Sbjct: 365 MKGQN--PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 422

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + +EM D  ++  VVT+  +I  LC+ G + +A++ F +M D G+ P+   Y  
Sbjct: 423 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 482

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    + +A+ L  E+    M  D   ++++I+   K     +A N+ +    VG
Sbjct: 483 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 542

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y+ L+ G    G +++A  +F  M+  GI P+ ++  +L+  + + G +DE +
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 602

Query: 241 ELQNEMMGRGL 251
            L  EM+ RG+
Sbjct: 603 SLFREMLQRGI 613



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +I  D+     ++  LC   K ++++ +   M   G   +      +++ Y   G 
Sbjct: 328 MRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 387

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L D ML   I     TF VLI      G++ +A+  F  M D G+ P+V  Y  
Sbjct: 388 LVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 447

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LC+   ++ A   F++M  + + PD  AY  LI G+  H S  +A  L + +   G
Sbjct: 448 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 507

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD+  ++S++  L + G + +A+ +F   +  G+ PD ++   L+  +   G M++A+
Sbjct: 508 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKAL 567

Query: 241 ELQNEMMGRGL 251
            + + M+  G+
Sbjct: 568 RVFDAMVSAGI 578



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 3/205 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-GRMPDF 109
           LMD   +A  P  AL+   ++L + + V ++    L++G C++    EA+D    R P+ 
Sbjct: 130 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 189

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFK 167
           G  P+V  Y+ L+  LC +    +A +L   M +   +  P+  AY  +IDG+ K     
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 249

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A +L   M + G+  DL  Y S+V  L +   + +A     +M+ + +LP+     +L+
Sbjct: 250 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 309

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
             +   G   EA+ +  EM    +L
Sbjct: 310 YGYSSTGQWKEAVRVFKEMRRHSIL 334



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 104/217 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D  +Y  ++ G C+  K E +  +   M   G+  N V+  TL++ Y K G   E L
Sbjct: 543 LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGL 602

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  EML   I+ + + + ++IDGL ++G    A   F  M + G+  ++  Y  ++ GL
Sbjct: 603 SLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 662

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K  C + A  LF E+   ++  +      +IDG  +    +EA +L   ++   +  ++
Sbjct: 663 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNV 722

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             Y+ ++  L + G ++EA  +F  M   G  P+  L
Sbjct: 723 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 759



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 111/242 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ ++ +Y T++ G C   + ++   L  EM + G+  +T++ + ++D  F+AG 
Sbjct: 573 MVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM +S I + + T+ +++ GL K+    EAI  F  +    +  N+     
Sbjct: 633 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 692

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG+ +   +E A++LF  + +  ++P+   Y+ +I   +K    +EA ++ + M   G
Sbjct: 693 MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + +      +V  L +   +  A     ++  R    + +  + L+     +G   E I
Sbjct: 753 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQI 812

Query: 241 EL 242
             
Sbjct: 813 RF 814



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 3/180 (1%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN-L 137
           T  T+ +L+D   ++     A+ +FG++   GL  N+ +   L++G C+    + A + L
Sbjct: 123 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL 182

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN--AYTSLVWGL 195
               P+   +PD  +Y+ L+          +A +L   M E G     N  AY +++ G 
Sbjct: 183 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 242

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            + G + +A  LF EM+ RGI PD +   S++    +   MD+A     +M+ + +L  +
Sbjct: 243 FKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNN 302



 Score = 40.8 bits (94), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 17/208 (8%)

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGL--------CKSGLVREAIDYFGRMPDFG- 110
            P EA  LLDE+      V        +  L        C+SG    A+  F R      
Sbjct: 57  RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPAL-AVALFNRAASRAQ 115

Query: 111 ----LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
               L P    Y  L+D   + +  E A   F ++ +  +  +      L++G+ + +  
Sbjct: 116 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRT 175

Query: 167 KEALN-LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL--PDEILC 223
            EAL+ L +R  E+G   D+ +Y+ L+  L   G   +A  L   M   G +  P+ +  
Sbjct: 176 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 235

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +++   ++ G++++A +L  EM+ RG+
Sbjct: 236 NTVIDGFFKEGDVNKACDLFKEMVQRGI 263


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 121/235 (51%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G  A+      LM  + K GE   A  + D + 
Sbjct: 116 YFKLVWGF------------YKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              ++ +VV+F  L++G  K G++ E       M   G  P+V  Y+ LI+GLCK++ ++
Sbjct: 164 KWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM ++ ++P+   +T LIDG+ K+     A+ +  ++   G+  DL  Y +L+
Sbjct: 224 EAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +G  + G L++ R L  EM  +G+ PD+I   +L+    + G+++ A E + +M+
Sbjct: 284 YGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMI 338



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 127/278 (45%), Gaps = 35/278 (12%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG-------- 59
           A L  +  ++   C E +   ++L+   + + GL  + V   TLM+ Y K G        
Sbjct: 134 ASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRL 193

Query: 60  ---------EPS------------------EALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
                    +P                   EA  L DEML+  +    VTF  LIDG CK
Sbjct: 194 KNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCK 253

Query: 93  SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           +G +  A++ + ++   GL P++  Y  LI G CKK  +++ R+L DEM  + + PD   
Sbjct: 254 NGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKIT 313

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           YT LIDG  K    + A   + +M E  + LD   YT+L+ GL + G   +A  +  EM+
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREML 373

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             G+ PD      ++ +  + G+++   +L  EM   G
Sbjct: 374 SVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDG 411



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 106/221 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D+  Y  +I GLC ESK +++  L  EM E GL  N V  TTL+D + K G+
Sbjct: 197 MHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGK 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  ++L   +   ++T+  LI G CK G +++  D    M   GL P+   YT 
Sbjct: 257 LDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A     +M + ++  D   YTALI G  K     +A  +   M  VG
Sbjct: 317 LIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   YT ++    + G +     L  EM   G +P  +
Sbjct: 377 LKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVV 417



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 104/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +AL       + +  V   T   ++D L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK+  I  A+ +FD + K  + P   ++  L++GY+K
Sbjct: 124 YKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   G   D+  Y+ L+ GL +   + EA  LF EM+ +G++P+ + 
Sbjct: 184 MGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +++ +GL
Sbjct: 244 FTTLIDGHCKNGKLDLAMEIYKQILSQGL 272



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 96/204 (47%)

Query: 48  CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           C  ++D   K            E+L+     ++  F +L+   CK G +R A   F  + 
Sbjct: 104 CRKVLDHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAIT 163

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
            +GL P+V  +  L++G  K   ++    L + M      PD   Y+ LI+G  K     
Sbjct: 164 KWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMD 223

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           EA  L + M E G+  +   +T+L+ G  + G L  A  ++ +++ +G+ PD I   +L+
Sbjct: 224 EAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLI 283

Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
               ++G++ +  +L +EM  +GL
Sbjct: 284 YGFCKKGDLKQTRDLIDEMSMKGL 307



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +NI+ D  +Y  +I GLC E +  D++ +L EM   GL  ++   T +M+ + K G+ + 
Sbjct: 340 ENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNT 399

Query: 64  ALSLLDEMLDSRIEVTVVT 82
              LL EM       +VVT
Sbjct: 400 GSKLLKEMQRDGHVPSVVT 418


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 115/241 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D  +Y T+I GLC   + E++  L+ +M+ +     T     L++ Y ++GE   A 
Sbjct: 224 VAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAH 283

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L +EM +++IE  V+T   L+DG+CK   +  A+++F  M   GL  N   YT  I+  
Sbjct: 284 KLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAF 343

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  N + +A    DEM K    PD   Y  LI G  +     +A ++ +++ E G  LD 
Sbjct: 344 CNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDR 403

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+    +   L  A+   +EM   G+ PD +   +L+    + GN   A +   +
Sbjct: 404 VCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKK 463

Query: 246 M 246
           M
Sbjct: 464 M 464



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 120/252 (47%), Gaps = 6/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG------LTANTVICTTLMDA 54
           MK  NI+  +  +G +I  LC   + +D+  +  +MK         +  +T++  TL+D 
Sbjct: 178 MKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDG 237

Query: 55  YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
             K G   EAL L+ +M   +   T  TF  LI+G C+SG +  A   F  M +  + PN
Sbjct: 238 LCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPN 297

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
           V     L+DG+CK N I  A   F  M ++ +  +   YT  I+ +    +  +A+   +
Sbjct: 298 VITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLD 357

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M++ G   D   Y +L+ GL++ G L +A  +  ++   G   D +    L+ +  ++ 
Sbjct: 358 EMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKN 417

Query: 235 NMDEAIELQNEM 246
            +D A E  NEM
Sbjct: 418 KLDRAQEWLNEM 429



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 122/258 (47%), Gaps = 3/258 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I+ ++    T++ G+C  ++   +      M++ GL  N V  T  ++A+     
Sbjct: 289 MENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNN 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A+  LDEM         V +  LI GL ++G + +A     ++ + G   +   Y  
Sbjct: 349 MNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNV 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT-EV 179
           LI   CKKN ++RA+   +EM    + PD+  Y  LI  + K  +FK A     +MT E 
Sbjct: 409 LISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEE 468

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM--IGRGILPDEILCISLLKKHYERGNMD 237
           G+   +  Y +L+       ++ EA  +F EM  +   + P+ ++   L+    ++  ++
Sbjct: 469 GLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVN 528

Query: 238 EAIELQNEMMGRGLLSGS 255
            A+ L ++M  RG++  +
Sbjct: 529 FALSLLDDMKFRGVMPNT 546



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 106/242 (43%), Gaps = 6/242 (2%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GL    +F    LL+ +MK+  +    +    L++   K     +AL + ++M   +
Sbjct: 158 LLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEK 217

Query: 76  IEVTV------VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
            E  V      + +  LIDGLCK G   EA+   G+M      P  A +  LI+G C+  
Sbjct: 218 EETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSG 277

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            IE A  LF+EM    + P+      L+DG  KH     A+     M + G+  +   YT
Sbjct: 278 EIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYT 337

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
             +       ++ +A     EM   G  PD ++  +L+    + G +D+A  + +++   
Sbjct: 338 VFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEA 397

Query: 250 GL 251
           G 
Sbjct: 398 GF 399



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 7/218 (3%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           NGL  +   C  L+    KA E  +   L+ +M D  I+ TV+TF +LI+ LCK   + +
Sbjct: 147 NGL-KDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDD 205

Query: 99  AIDYFGRMP------DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           A++ F +M          + P+  +Y  LIDGLCK    E A  L  +M      P T  
Sbjct: 206 ALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTAT 265

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           +  LI+GY +    + A  L N M    ++ ++    +LV G+ +   +  A   F  M 
Sbjct: 266 FNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQ 325

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +G+  + +     +       NM++A+E  +EM   G
Sbjct: 326 QKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDG 363



 Score = 83.6 bits (205), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 3/209 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y  +I   C ++K + ++  L+EM+  G+  ++V   TL+  + K G    A   +
Sbjct: 402 DRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFM 461

Query: 69  DEMLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG--LHPNVAVYTALIDGL 125
            +M +   +  TV T+  LI   C +  + EAI  F  M +    + PN  +Y  LID L
Sbjct: 462 KKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSL 521

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK+  +  A +L D+M  R ++P+TT Y ++           +A  L +RM E   + D 
Sbjct: 522 CKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDY 581

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
                L   LS  G + + +      + R
Sbjct: 582 ITMEILTEWLSAVGEITKLKKFTQGCMNR 610



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 97/216 (44%), Gaps = 3/216 (1%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D  +Y T+I GL    + +D+  ++S++KE G   + V    L+  + K  +   A   L
Sbjct: 367 DAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWL 426

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF-GLHPNVAVYTALIDGLCK 127
           +EM  + ++   VT+  LI    K G  + A  +  +M +  GL P V  Y ALI   C 
Sbjct: 427 NEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCL 486

Query: 128 KNCIERARNLFDEMPK--RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            N I+ A  +F EM      + P+T  Y  LID   K      AL+L + M   GV  + 
Sbjct: 487 NNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNT 546

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
             Y S+   L     L +A  L   M+ +   PD I
Sbjct: 547 TTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYI 582



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 6/226 (2%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L+S+  ++ +  +T+  T L+    ++G  + A ++LD ++             L+ GL 
Sbjct: 104 LVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLG 163

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP------KRD 145
           K+    +      +M D  + P V  +  LI+ LCK   I+ A  +F++M       K  
Sbjct: 164 KAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVF 223

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PDT  Y  LIDG  K    +EAL L  +M           +  L+ G  R G ++ A 
Sbjct: 224 VAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAH 283

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            LF+EM    I P+ I   +L+    +   +  A+E    M  +GL
Sbjct: 284 KLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGL 329



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 20/220 (9%)

Query: 44  NTVICTTLMDAYFKAGEPSEALSLLDEML--------DSRIEVTVVTFCVLIDGLCKSGL 95
           NT +   +++   K+G    A+++LDEML        + +    V    + IDGL   G 
Sbjct: 38  NTNVRNEIINLLLKSGRVDNAMNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGL--EGR 95

Query: 96  VREAIDYFGRMPDFGLH---PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
           V+E  +  G +  FG H   P+    T LI  LC+      A N+ D +   + + D   
Sbjct: 96  VKED-EIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAP 154

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
             AL+ G  K   F +   L  +M ++ +   +  +  L+  L +   + +A  +F +M 
Sbjct: 155 CNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMK 214

Query: 213 GRG------ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           G        + PD I+  +L+    + G  +EA+ L  +M
Sbjct: 215 GEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKM 254



 Score = 38.5 bits (88), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 85/200 (42%), Gaps = 10/200 (5%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM--PDFGLHPN 114
           + G   EAL+     LDS  + T V    +I+ L KSG V  A++    M  P+    PN
Sbjct: 18  RIGMVDEALAAF-STLDSHAKNTNVR-NEIINLLLKSGRVDNAMNVLDEMLLPESEFRPN 75

Query: 115 VA----VYTAL--IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
                 V+  L  IDGL  +   +    L  +  K ++ PDT A T LI    +  +   
Sbjct: 76  DKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNL 135

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A N+ + +  +    D     +L+ GL +     +  +L  +M    I P  I    L+ 
Sbjct: 136 AWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILIN 195

Query: 229 KHYERGNMDEAIELQNEMMG 248
              +   +D+A+E+  +M G
Sbjct: 196 HLCKFRRIDDALEVFEKMKG 215


>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           ++ +Y  ++ G C     + S  +  ++   G  A    C  L+      G+  +A+ LL
Sbjct: 540 NIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLL 599

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D ML S +E + + +  ++  LC++G ++ A   F      G  P+V  YT +I+  C+ 
Sbjct: 600 DRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRM 659

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR------------- 175
           NC++ A +LF +M +R + PD   +T L+DG LK    K   +   R             
Sbjct: 660 NCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRD 719

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           M ++ ++ D+  YT L+ G  +  + Q+A  LF +MI  G+ PD I   +L+     RG+
Sbjct: 720 MEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGH 779

Query: 236 MDEAIELQNEMMGRGL 251
           +++A+ L NEM  +G+
Sbjct: 780 VEKAVTLLNEMSSKGM 795



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 4/217 (1%)

Query: 7   KADLPL----YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           K + PL    Y  ++ G C E K ++++ +  +M+  G+  +  + ++L+  Y K+    
Sbjct: 293 KGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLL 352

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            AL+L DEM+   ++   V    ++  L + G+  E +D F  + + G+  +   Y  + 
Sbjct: 353 RALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVF 412

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LC    +E A  + +EM  + +  D   YT LI+GY        A N+   M E G+ 
Sbjct: 413 DALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLK 472

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            D+  Y  L  GLSR GH +E   L   M  +G+ P+
Sbjct: 473 PDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPN 509



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 105/219 (47%), Gaps = 18/219 (8%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N++    +Y  I+  LC     ++++ L       G T + V  T ++++Y +     EA
Sbjct: 606 NVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNCLQEA 665

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR-------------MPDFGL 111
             L  +M    I+  V+TF VL+DG  K  L +    +  R             M    +
Sbjct: 666 HDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDMEQMKI 725

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
           +P+V  YT L+DG  K +  ++A +LFD+M +  + PDT  YTAL+ G       ++A+ 
Sbjct: 726 NPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVT 785

Query: 172 LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
           L N M+  G+  D++  ++L  G+     ++  +V FH+
Sbjct: 786 LLNEMSSKGMTPDVHIISALKRGI-----IKARKVQFHK 819



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 122/275 (44%), Gaps = 41/275 (14%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +   LC+  K ED+  ++ EMK   L  +    TTL++ Y   G+   A ++  EM 
Sbjct: 408 YNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMK 467

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  ++  +VT+ VL  GL ++G  RE +     M   G+ PN   +  +I+GLC    + 
Sbjct: 468 EKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVL 527

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYL-----------------------KHESFK-- 167
            A   F+ +  +++      Y+A+++GY                        K   FK  
Sbjct: 528 EAEVYFNSLEDKNI----EIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLL 583

Query: 168 ----------EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
                     +A+ L +RM    V+     Y+ ++  L + G ++ AR LF   + RG  
Sbjct: 584 SKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFT 643

Query: 218 PDEILCISLLKKHYERGN-MDEAIELQNEMMGRGL 251
           PD ++  +++   Y R N + EA +L  +M  RG+
Sbjct: 644 PD-VVTYTIMINSYCRMNCLQEAHDLFQDMKRRGI 677



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 101/216 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D+ +Y ++I G C       +  L  EM   G+  N V+ + ++    + G 
Sbjct: 326 MERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGM 385

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E +    E+ +S + +  V + ++ D LC  G V +A++    M    L  +V  YT 
Sbjct: 386 TLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTT 445

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C +  +  A N+F EM ++ + PD   Y  L  G  ++   +E + L + M   G
Sbjct: 446 LINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQG 505

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
           +  +   +  ++ GL   G + EA V F+ +  + I
Sbjct: 506 MKPNSTTHKMIIEGLCSGGKVLEAEVYFNSLEDKNI 541



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 104/227 (45%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
           F+ +   L + +  G+  + + C  L +   + GE  +AL++ +++          T+ +
Sbjct: 176 FDKAIDFLFQTRRRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAI 235

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           +I  LCK G +++ +  F  M   G+ P+   + A I+GLC  +  +    +     K +
Sbjct: 236 VIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGN 295

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
              +  AYTA++ G+       EA  + + M   GV  D+  Y+SL+ G  +  +L  A 
Sbjct: 296 APLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRAL 355

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L  EMI RG+  + ++   +L    E G   E ++   E+   G+ 
Sbjct: 356 ALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMF 402



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 106/279 (37%), Gaps = 37/279 (13%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC +   +    +  EM+  G+  ++      ++             +L    
Sbjct: 233 YAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFR 292

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                + V  +  ++ G C    + EA   F  M   G+ P+V VY++LI G CK + + 
Sbjct: 293 KGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLL 352

Query: 133 RARNLFDEMPKR-----------------------------------DMIPDTTAYTALI 157
           RA  L DEM  R                                    M  D  AY  + 
Sbjct: 353 RALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVF 412

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           D        ++A+ +   M    + LD+  YT+L+ G    G L  A  +F EM  +G+ 
Sbjct: 413 DALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLK 472

Query: 218 PDEILCISLLKKHYER-GNMDEAIELQNEMMGRGLLSGS 255
           PD I+  ++L     R G+  E ++L + M  +G+   S
Sbjct: 473 PD-IVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNS 510


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 121/254 (47%), Gaps = 3/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K D   YG+++  LC  S+       L  M ENGL+ +  I      AY K G 
Sbjct: 268 MSARGLKPDCYTYGSLLNYLCALSEMHS---FLDLMVENGLSPDHHIFNIFFSAYAKCGM 324

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + ++M    +   VV +  LID LCK G V +A   F +M + G+ PN+ V+ +
Sbjct: 325 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 384

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC  +  ERA  L  EM  + + P+   +  LI          E   L + M  VG
Sbjct: 385 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 444

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D  +YT L+ G    G   EA  +F  M+  G+ P E+   +LL  +     +D+A 
Sbjct: 445 VRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 504

Query: 241 ELQNEMMGRGLLSG 254
            L  EM+ +G+  G
Sbjct: 505 CLFREMLRKGVTPG 518



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 115/252 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++ ++ ++++GLC   K+E ++ L+ EM + G+  N V   TL+      G 
Sbjct: 370 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 429

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L+D M    +     ++  LI G C +G   EA   F  M   GL P    Y  
Sbjct: 430 VMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNT 489

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C  + I+ A  LF EM ++ + P    Y  ++ G  + + F EA  L   M   G
Sbjct: 490 LLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 549

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y  ++ GL +   + EA  +F  +  +G+  + I    ++    + G  ++A+
Sbjct: 550 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAM 609

Query: 241 ELQNEMMGRGLL 252
           +L   +   GL+
Sbjct: 610 DLFAAIPANGLV 621



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 123/281 (43%), Gaps = 32/281 (11%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G++   ++  Y T+I GLC    F+ ++ +  +M +NG+  N      L+  Y   G+  
Sbjct: 200 GRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWK 259

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLC------------------------------- 91
           E + +L++M    ++    T+  L++ LC                               
Sbjct: 260 EVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 319

Query: 92  -KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
            K G++ +A+D F +M   GL PNV  Y ALID LCK   ++ A   F++M    + P+ 
Sbjct: 320 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 379

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             + +L+ G    + ++ A  L   M + G+  +   + +L+  L   G + E R L   
Sbjct: 380 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 439

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M   G+ PD      L+  +   G  DEA ++ + M+  GL
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGL 480



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 107/251 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  ++  YG +I  LC   + +D+++  ++M   G+T N V+  +L+       +
Sbjct: 335 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 394

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+ EMLD  I    V F  LI  LC  G V E       M   G+ P+   YT 
Sbjct: 395 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 454

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C     + A  +FD M    + P    Y  L+ GY       +A  L   M   G
Sbjct: 455 LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 514

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V   +  Y +++ GL +     EA+ L+  MI  G   D      +L    +   +DEA 
Sbjct: 515 VTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAF 574

Query: 241 ELQNEMMGRGL 251
           ++   +  +GL
Sbjct: 575 KMFQSLCSKGL 585



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 7/243 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS-LLDEM 71
           Y  +I  LC   + + S      + + G   N ++   L+          EA+  LL  M
Sbjct: 101 YSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRM 160

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLH--PNVAVYTALIDGLCKK 128
            +       V++ +L+ G C      EA++    M  D G    PNV  YT +IDGLCK 
Sbjct: 161 PELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKA 220

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              +RA  +F +M    + P+   Y  LI GYL    +KE + +  +M+  G+  D   Y
Sbjct: 221 QLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTY 280

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            SL   L+    L E       M+  G+ PD  +       + + G +D+A+++ N+M  
Sbjct: 281 GSL---LNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQ 337

Query: 249 RGL 251
            GL
Sbjct: 338 HGL 340



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 113/239 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D   Y  +I G C+  + ++++ +   M   GL+   V   TL+  Y  A  
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  EML   +   VVT+  ++ GL ++    EA + +  M + G   ++  Y  
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++GLCK NC++ A  +F  +  + +  +   +T +I   LK    ++A++L   +   G
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 619

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           +  ++  Y  +   L   G L+E   LF  M   G  P+  +  +L+++   RG++  A
Sbjct: 620 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRA 678



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 7/195 (3%)

Query: 64  ALSLLDEMLDS---RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +SL + M+     ++     T+ +LI  LC+ G ++ +   FG +   G   N  V   
Sbjct: 79  VVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQ 138

Query: 121 LIDGLCKKNCIERARN-LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE- 178
           L+ GLC    +  A + L   MP+    PDT +Y+ L+ G+      +EAL L   M   
Sbjct: 139 LLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAND 198

Query: 179 --VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
                  ++  YT+++ GL +      A  +F +MI  G+ P+      L+  +   G  
Sbjct: 199 HGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKW 258

Query: 237 DEAIELQNEMMGRGL 251
            E +++  +M  RGL
Sbjct: 259 KEVVQMLEKMSARGL 273



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 75/175 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K D+  Y  I+ GLC  +  +++  +   +   GL  N +  T ++ A  K G 
Sbjct: 545 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 604

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ L   +  + +   VVT+ ++ + L + G + E    F  M   G  PN  +  A
Sbjct: 605 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 664

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
           L+  L  +  I RA     ++ +R+   + +  + LI  +   E    A +L  +
Sbjct: 665 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSLPEK 719


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 124/241 (51%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +   L  +  ++ GLC   K   +         NG T +    T ++D   K  +  +A+
Sbjct: 126 VAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAV 185

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L++++  +    T+ T+  L++GLCK G + EAID   ++ D G  P+V  YT+LIDGL
Sbjct: 186 ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 245

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K+     A  LF EM  R ++ DT  YTALI G L+     +A ++   MT  G   D+
Sbjct: 246 GKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDV 305

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
              ++++ GL + G +  A  +F  M  RG+ P+E++  +L+    +   MD A+E+  +
Sbjct: 306 VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 365

Query: 246 M 246
           M
Sbjct: 366 M 366



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 113/242 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I GL  E +  ++  L  EM   GL  +TV  T L+    +AG+  +A S+ 
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M        VVT   +IDGLCK+G +  A+  F  M   GL PN  VY+ALI GLCK 
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  +  +M K    PDT  Y  LIDG  K    + A    + M E G   D+  Y
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             LV G  + G+   A  +F +M      P+ +   +L+    +R  + +A      M  
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKE 473

Query: 249 RG 250
           RG
Sbjct: 474 RG 475



 Score =  114 bits (284), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 3/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+    T+I GLC   +   +  +   M+  GL  N V+ + L+    KA +
Sbjct: 296 MTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 355

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +L +M  +      +T+ +LIDGLCKSG V  A  +F  M + G  P+V  Y  
Sbjct: 356 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 415

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK    + A  +FD+M      P+   Y  LI G  K     +A      M E G
Sbjct: 416 LVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERG 475

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEA 239
              D   Y+SLV GL + G L+   +LF EM   G+   +    + L  H  + N +DEA
Sbjct: 476 CPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTR--TRLIFHLCKANRVDEA 533

Query: 240 IELQNEMMGRGL 251
           + L N +   G+
Sbjct: 534 VSLFNAIRKEGM 545



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 112/237 (47%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           +  Y  ++ GLC   + E++  LL ++ +NG T + V  T+L+D   K     EA  L  
Sbjct: 200 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 259

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM    + +  V +  LI GL ++G + +A   +  M   G  P+V   + +IDGLCK  
Sbjct: 260 EMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAG 319

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I  A  +F  M  R + P+   Y+ALI G  K      AL +  +M +     D   Y 
Sbjct: 320 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 379

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            L+ GL + G ++ AR  F EM+  G  PD      L+    + GN D A  + ++M
Sbjct: 380 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDM 436



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 122/244 (50%), Gaps = 1/244 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAGEPSEALSL 67
           D+  +  +I G C+  + E++  ++ EM+E+ G+  +      ++    K+G+   A+  
Sbjct: 93  DVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDH 152

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            +    +   + + T+  ++D L K+  +++A+    ++   G  P +A Y AL++GLCK
Sbjct: 153 FETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCK 212

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +E A +L  ++      PD   YT+LIDG  K +   EA  L   M   G+ LD   
Sbjct: 213 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVC 272

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT+L+ GL + G + +A  ++  M  +G +PD +   +++    + G +  A+ +   M 
Sbjct: 273 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 332

Query: 248 GRGL 251
            RGL
Sbjct: 333 ARGL 336



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 1/203 (0%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DF 109
           L+D + +     EA +LL   L +     V T+ VLI G C +    EA      M  D+
Sbjct: 65  LLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDY 124

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G+ P++  +  ++ GLCK   +  A + F+         D   YTA++D   K++  ++A
Sbjct: 125 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           + L  ++T  G    +  Y +L+ GL + G L+EA  L  +++  G  PD +   SL+  
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 244

Query: 230 HYERGNMDEAIELQNEMMGRGLL 252
             +     EA +L  EM  RGL+
Sbjct: 245 LGKEKRSFEAYKLFKEMALRGLV 267



 Score = 42.7 bits (99), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/180 (21%), Positives = 65/180 (36%), Gaps = 36/180 (20%)

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
           P FG   +V    AL+D   +      A NL         +PD   +  LI GY      
Sbjct: 51  PRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREP 110

Query: 167 KEALNLKNRM------------------------------------TEVGVDLDLNAYTS 190
           +EA  +   M                                    T  G  +D++ YT+
Sbjct: 111 EEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTA 170

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +V  L++   +Q+A  L  ++   G  P      +LL    + G ++EAI+L  +++  G
Sbjct: 171 IVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 230


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 124/245 (50%), Gaps = 1/245 (0%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            YG ++ GL    + ED++ L +EM E G  AN  I   L++ +  AG   +   L  +M+
Sbjct: 942  YGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMV 1001

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            D  I   + ++ ++ID LCK+G + + + YF ++ + GL P++  Y  LIDGL K   +E
Sbjct: 1002 DQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLE 1061

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             A +LF+EM K+ ++P+   Y +LI    K     EA  +   +   G   ++  Y +L+
Sbjct: 1062 EAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALI 1121

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPDEILC-ISLLKKHYERGNMDEAIELQNEMMGRGL 251
             G S  G    A   +  MI  G LP+   C I  L K + +G+ D    +   +   G+
Sbjct: 1122 RGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLKGDSDSYEIIVTFINAEGM 1181

Query: 252  LSGSK 256
            L+ S+
Sbjct: 1182 LAYSR 1186



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 123/240 (51%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y ++I GL  E+  + ++ L +EMKE G   +      L+DA  K+    E L + +EM 
Sbjct: 837  YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 896

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                E T VT+  +I GL KS  + +AID +  +   G  P    Y  L+DGL K   IE
Sbjct: 897  RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 956

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             A NLF+EM +     + T Y  L++G+    + ++  +L   M + G++ D+ +YT ++
Sbjct: 957  DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 1016

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              L + G L +    F +++  G+ PD I    L+    +   ++EA+ L NEM  +G++
Sbjct: 1017 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1076



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 119/255 (46%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K  ++    Y TII GL    + E +  L   +   G +        L+D   KAG 
Sbjct: 895  MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 954

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              +A +L +EML+   +     + +L++G   +G   +    F  M D G++P++  YT 
Sbjct: 955  IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 1014

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +ID LCK   +      F ++ +  + PD   Y  LIDG  K +  +EA++L N M + G
Sbjct: 1015 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 1074

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            +  +L  Y SL+  L + G   EA  ++ E++ +G  P+     +L++ +   G+ D A 
Sbjct: 1075 IVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAY 1134

Query: 241  ELQNEMMGRGLLSGS 255
                 M+  G L  S
Sbjct: 1135 AAYGRMIVGGCLPNS 1149



 Score =  106 bits (265), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 35/282 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K ++  Y   I  L    +F+++  +L+EM+  G   + +  T L+     AG 
Sbjct: 300 MEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGR 359

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A  +  +M  S  +   VT+  L+D    +G  +  ++ +  M   G + NV  YTA
Sbjct: 360 ISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTA 419

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL-------- 172
           +ID LC+   +  A  +FDEM ++ ++P+  +Y +LI G+LK + F +AL L        
Sbjct: 420 VIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHG 479

Query: 173 --KNRMTEV-------------------------GVDLDLNAYTSLVWGLSRCGHLQEAR 205
              N  T V                         G+  D+ A  ++++GL++ G L  A+
Sbjct: 480 PKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAK 539

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            +FHE+   G+ PD I    ++K   +    DEA+++  +M+
Sbjct: 540 RVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMI 581



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 126/257 (49%), Gaps = 4/257 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  D+     +++GL    +   +K +  E+K  G++ +T+  T ++    KA +
Sbjct: 510 MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASK 569

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  +M+++     V+    LID L K+G   EA   F ++ +  L P    Y  
Sbjct: 570 FDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNT 629

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GL ++  ++   +L +EM   +  P+   Y  ++D   K+ +  +AL++   MT  G
Sbjct: 630 LLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKG 689

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL++Y ++++GL +     EA  +F +M  + ++PD     ++L    + G M EA+
Sbjct: 690 CIPDLSSYNTVIYGLVKEERYNEAFSIFCQM-KKVLIPDYATLCTILPSFVKIGLMKEAL 748

Query: 241 ELQNEMMGRGLLSGSKN 257
            +  E     L  GSK 
Sbjct: 749 HIIKEYF---LQPGSKT 762



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 119/281 (42%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +KA++  +  I  GL +E     + + L  MKE G+  N      L+    K+G 
Sbjct: 195 MQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGF 254

Query: 61  PSEALS-----------------------------------LLDEMLDSRIEVTVVTFCV 85
             EAL                                    LL EM    ++  V ++ +
Sbjct: 255 DREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTI 314

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
            I  L ++    EA      M + G  P+V  +T LI  LC    I  A+++F +M K D
Sbjct: 315 CIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSD 374

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             PD   Y  L+D +  +   +  + + N M   G + ++ AYT+++  L + G + EA 
Sbjct: 375 QKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL 434

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +F EM  +GI+P++    SL+    +     +A+EL   M
Sbjct: 435 EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYM 475



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 108/242 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  + K D   Y T++       + +    + + MK +G   N V  T ++DA  + G 
Sbjct: 370 MKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 429

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL + DEM    I     ++  LI G  K+    +A++ F  M   G  PN   +  
Sbjct: 430 VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVL 489

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I+   K     +A   ++ M  + ++PD  A  A++ G  K      A  + + +  +G
Sbjct: 490 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 549

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   YT ++   S+     EA  +F++MI    +PD ++  SL+   Y+ G  DEA 
Sbjct: 550 VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAW 609

Query: 241 EL 242
           ++
Sbjct: 610 QI 611



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 37/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    DL  Y T+I+GL  E ++ ++  +  +MK+  +     +CT ++ ++ K G 
Sbjct: 685 MTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCT-ILPSFVKIGL 743

Query: 61  PSEALSLLDEML------------------------------------DSRIEVTVVTFC 84
             EAL ++ E                                       S I +     C
Sbjct: 744 MKEALHIIKEYFLQPGSKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLC 803

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            LI  LCK     EA +   +   FG+      Y +LI GL  +N I+ A  LF EM + 
Sbjct: 804 PLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKEL 863

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PD   Y  L+D   K    +E L ++  M   G +     Y +++ GL +   L++A
Sbjct: 864 GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQA 923

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             L++ ++ +G  P       LL    + G +++A  L NEM+  G
Sbjct: 924 IDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 969



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 113/252 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K I  +   Y ++I G     +F D+  L   M  +G   N       ++ Y K+GE
Sbjct: 440 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGE 499

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+   + M    I   VV    ++ GL KSG +  A   F  +   G+ P+   YT 
Sbjct: 500 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 559

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I    K +  + A  +F +M + + +PD     +LID   K     EA  +  ++ E+ 
Sbjct: 560 MIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMN 619

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++     Y +L+ GL R G ++E   L  EM      P+ I   ++L    + G +++A+
Sbjct: 620 LEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDAL 679

Query: 241 ELQNEMMGRGLL 252
           ++   M  +G +
Sbjct: 680 DMLYSMTTKGCI 691



 Score = 75.9 bits (185), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 97/221 (43%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           LL EM+ +G+  N    T  +    +A    EA  +L EM +   +  V+T  VLI  LC
Sbjct: 296 LLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLC 355

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
            +G + +A D F +M      P+   Y  L+D        +    +++ M       +  
Sbjct: 356 DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVV 415

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           AYTA+ID   +     EAL + + M + G+  +  +Y SL+ G  +     +A  LF  M
Sbjct: 416 AYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYM 475

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
              G  P+    +  +  + + G   +AI+    M  +G++
Sbjct: 476 DIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIV 516



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 93/252 (36%), Gaps = 35/252 (13%)

Query: 34  SEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG---- 89
           S  +   +   T  C  ++D     G   +   + D M    ++  V TF  +  G    
Sbjct: 158 SAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQIVKANVGTFAAIFGGLGVE 217

Query: 90  -------------------------------LCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
                                          L KSG  REA++ +  M   G+ P+V  Y
Sbjct: 218 GGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTY 277

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + L+    K+  +E    L  EM    + P+  +YT  I    +   F EA  +   M  
Sbjct: 278 SVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMEN 337

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            G   D+  +T L+  L   G + +A+ +F +M      PD +  I+LL K  + G    
Sbjct: 338 EGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQS 397

Query: 239 AIELQNEMMGRG 250
            +E+ N M   G
Sbjct: 398 VMEIWNAMKADG 409



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 2/167 (1%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  + I  D+  Y  II  LC   +  D      ++ E GL  + +    L+D   K+  
Sbjct: 1000 MVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKR 1059

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA+SL +EM    I   + T+  LI  L K+G   EA   +  +   G  PNV  Y A
Sbjct: 1060 LEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNA 1119

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTA--YTALIDGYLKHES 165
            LI G       + A   +  M     +P+++      L+  +LK +S
Sbjct: 1120 LIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTCHIHELMKTFLKGDS 1166


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K ++  YGT++ G   +    +   LL  M  NG+  N  + + L+ AY K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  +M    +    VT+  +I  LCKSG V +A+ YF +M D  L P   VY +
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC  +  ++A+ L  EM  R +  DT  + ++ID + K     E+  L + M  +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y++L+ G    G + EA  L   M+  G+ PD +   +L+  + +   M++A+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 570 VLFREMESSGV 580



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y +II  LC     + +  +L+ M +NG+  N     +++  Y  +G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L+D LCK+G   EA   F  M   GL P +  Y  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + P+   ++ LI  Y K     +A+ + ++M + G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y +++  L + G +++A   F +MI   + P  I+  SL+         D+A 
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 465 ELILEMLDRGI 475



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 125/253 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G +   D+  Y T+I G   E   + +     EM + G+  N V  ++++ A  KA    
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ +L  M+ + +     T+  ++ G C SG  +EAI +  +M   G+ P+V  Y +L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK      AR +FD M KR + P+ T Y  L+ GY    +  E   L + M   G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +   ++ L+   ++ G + +A ++F +M  +G+ PD +   +++    + G +++A+  
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 243 QNEMMGRGLLSGS 255
             +M+   L  G+
Sbjct: 432 FEQMIDERLSPGN 444



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 102/200 (51%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y ++I  LCI  K++ +K L+ EM + G+  +T+   +++D++ K G   E+  L D M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++  ++T+  LIDG C +G + EA      M   G+ P+   Y  LI+G CK + +
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  LF EM    + PD   Y  ++ G  +      A  L   +TE G  L+L+ Y  +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 192 VWGLSRCGHLQEARVLFHEM 211
           + GL +     EA  +F  +
Sbjct: 626 LHGLCKNNLTDEALRMFQNL 645



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y +++  LC   +  +++ +   M + GL        TL+  Y   G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD M+ + I      F +LI    K G V +A+  F +M   GL+P+   Y  
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK   +E A   F++M    + P    Y +LI      + + +A  L   M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD   + S++    + G + E+  LF  M+  G+ PD I   +L+  +   G MDEA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 241 ELQNEMMGRGL 251
           +L   M+  G+
Sbjct: 535 KLLASMVSVGM 545



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 98/208 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D   YGT+I  LC   + ED+     +M +  L+   ++  +L+ +     +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EMLD  I +  + F  +ID  CK G V E+   F  M   G+ P++  Y+ 
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L   M    M PD   Y  LI+GY K    ++AL L   M   G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  D+  Y  ++ GL +      A+ L+
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELY 607



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 102/219 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   + +II   C E +  +S+ L   M   G+  + +  +TL+D Y  AG+
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M+   ++   VT+  LI+G CK   + +A+  F  M   G+ P++  Y  
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GL +      A+ L+  + +     + + Y  ++ G  K+    EAL +   +    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           + L+   +  ++  L + G   EA+ LF  +   G++PD
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 113/234 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T+I G C+  K +++  LL+ M   G+  + V   TL++ Y K     +AL
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM  S +   ++T+ +++ GL ++     A + +  + + G    ++ Y  ++ GL
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N  + A  +F  +   D+  +T  +  +I   LK     EA +L   ++  G+  D+
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y+ +   L   G L+E   LF  M   G   +  +  S+++K  +RG++  A
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 3/197 (1%)

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID-YFGRMPDFGLHPNVA 116
           AG      + L  ++     V  + F  L+ GLC      +A+D    RM   G  PNV 
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKR--DMIPDTTAYTALIDGYLKHESFKEALNLKN 174
            Y  L+ GLC +N  + A  L   MP    D  PD  +YT +I+G+ K     +A    +
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M + G+  ++  Y+S++  L +   + +A  +   M+  G++P+     S++  +   G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 235 NMDEAIELQNEMMGRGL 251
              EAI    +M   G+
Sbjct: 284 QPKEAIGFLKKMHSDGV 300



 Score = 70.1 bits (170), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 94/204 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K D   Y T+I G C  S+ ED+ +L  EM+ +G++ + +    ++   F+   
Sbjct: 540 MVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRR 599

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L   + +S  ++ + T+ +++ GLCK+ L  EA+  F  +    L      +  
Sbjct: 600 TAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNI 659

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L K    + A++LF  +    ++PD   Y+ + +  ++    +E  +L   M E G
Sbjct: 660 MIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENG 719

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
              +     S+V  L + G +  A
Sbjct: 720 CTANSRMLNSIVRKLLQRGDITRA 743


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 129/256 (50%), Gaps = 12/256 (4%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGL-----TANTVICTTLMDAYF 56
           KGK I  D   Y TII GLC E +FE++  LL+EM+E  L     T N ++C  L DA  
Sbjct: 328 KGKAI--DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCA-LADA-- 382

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
             G+  +A    ++M++   +  + T  +L+ GLC  G++  A+  F      G   +  
Sbjct: 383 -EGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV 441

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKNR 175
            Y  +I GLCK+   E A +L  EM +++ ++PD T Y  +I GY +    ++A   +N+
Sbjct: 442 TYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNK 501

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           M E     DL     L+ GL R G L +A  LF+  I +G   D +   +++    + G 
Sbjct: 502 MVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGR 561

Query: 236 MDEAIELQNEMMGRGL 251
            +EA +L  EM  + L
Sbjct: 562 FEEAFDLLAEMKEKKL 577



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 2/232 (0%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++W LC   K + S   L+E+ E+GL  + +   T++  Y + G+  +A    ++M++  
Sbjct: 236 VLW-LCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKS 294

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
            +  + T  +L+ GLC  G++  A+  F      G   +   Y  +I GLCK+   E A 
Sbjct: 295 FKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAF 354

Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHE-SFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
           +L  EM ++ + PD   Y A++      E   ++A   +N+M E     DL     L+ G
Sbjct: 355 DLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRG 414

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           L   G L  A  LF+  I +G   D +   +++    + G  +EA +L  EM
Sbjct: 415 LCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEM 466



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 3/157 (1%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKE-NGLTANTVICTTLMDAYFKAGE 60
           KGK I  D   Y TII GLC E +FE++  LL+EM+E NGL  +     T++  Y + G+
Sbjct: 434 KGKAI--DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQ 491

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A    ++M++   +  + T  +L+ GLC+ G++ +A+  F      G   +   Y  
Sbjct: 492 VEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNT 551

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
           +I GLCK+   E A +L  EM ++ + PD   Y A++
Sbjct: 552 IISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAIL 588



 Score = 77.0 bits (188), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 1/203 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K+ K DL     ++ GLC E   +++  L +     G   + V   T++    K G 
Sbjct: 396 MVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGR 455

Query: 61  PSEALSLLDEMLDSRIEVT-VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             EA  LL EM +    V    T+  +I G C+ G V +A  +  +M +    P++    
Sbjct: 456 FEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCN 515

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+ GLC++  + +A  LF+    +    D   Y  +I G  K   F+EA +L   M E 
Sbjct: 516 ILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEK 575

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQ 202
            +  D   Y +++  L+  G ++
Sbjct: 576 KLGPDCYTYNAILCALADAGRME 598



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 24/230 (10%)

Query: 46  VICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL---------CKSGLV 96
           VI  T + AY     P  A  + + M    ++  ++T   LI+ L         C S  +
Sbjct: 136 VILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAI 195

Query: 97  -------------REAIDYFGRMPDFGLHPNVAVYTALID--GLCKKNCIERARNLFDEM 141
                         EAI   G+M DF   P+ A Y  ++D   LC+    +++ +  +E+
Sbjct: 196 FTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNEL 255

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            +  ++P    Y  +I GY +    ++A   +N+M E     DL     L+ GL   G L
Sbjct: 256 LESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGML 315

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             A  LF+  I +G   D +   +++    + G  +EA +L  EM  + L
Sbjct: 316 DNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKL 365


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+ +Y TII G+C E   E +  +L+ M   GL  N V   T++     A  
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM      +  VTF +L+D  C++GLV   I+   +M   G  P+V  YT 
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK+  I+ A  L   M      P+T +YT ++ G      + +A  L ++M + G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + +L+  L + G +++A  L  +M+  G  PD I   +++    + G  +EA+
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516

Query: 241 ELQNEMMGRGL 251
           EL N M+ +G+
Sbjct: 517 ELLNVMVNKGI 527



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 122/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ GLC   ++++++ LLSEM +     + V    L+D + + G 
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL++ML       V+T+  +I+G CK GL+ EA+     M   G  PN   YT 
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC       A  L  +M ++   P+   +  LI+   K    ++A+ L  +M   G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL +Y++++ GL + G  +EA  L + M+ +GI P+ I+  S+       G +++ I
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 241 EL 242
           ++
Sbjct: 552 QM 553



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +AD+  Y  ++ GLC+  ++ D + L+ EM       N V   TL+    + G       
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L +M +      +  +  +IDG+CK G +  A +   RMP +GL PNV  Y  ++ GLC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 127 ----------------KKNC-------------------IERARNLFDEMPKRDMIPDTT 151
                           +K+C                   ++R   L ++M     +PD  
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT +I+G+ K     EA+ L   M+  G   +  +YT ++ GL   G   +A  L  +M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I +G  P+ +   +L+    ++G +++AIEL  +M+  G
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491



 Score =  105 bits (261), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 114/244 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NTV  T ++     AG   +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+        VTF  LI+ LCK GLV +AI+   +M   G  P++  Y+ +IDGL K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              E A  L + M  + + P+T  Y+++     +     + + + + + +  +  D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L +      A   F  M+  G +P+E     L+K     G   EA EL +E+  
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629

Query: 249 RGLL 252
           RG L
Sbjct: 630 RGAL 633



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 35/275 (12%)

Query: 11  PLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL-- 68
           P+Y  I+   C    F +S  +L  M   G T +T  C  +++A  + G   EA+ LL  
Sbjct: 147 PMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK 206

Query: 69  -----------------------------DEMLDSRIEV----TVVTFCVLIDGLCKSGL 95
                                        +E++D  + V     +VTF  LI  LC++GL
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
                +   +M + G  P++ +Y  +IDG+CK+  +E A  + + MP   + P+   Y  
Sbjct: 267 FERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           ++ G    E +KEA  L + M +    LD   +  LV    + G +     L  +M+  G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +PD I   +++    + G +DEA+ L   M   G
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 108/222 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K +   Y  ++ GLC   ++ D++ L+S+M + G   N V   TL++   K G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL +ML +     ++++  +IDGL K+G   EA++    M + G+ PN  +Y++
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +   L ++  + +   +FD +    +  D   Y A+I    K      A++    M   G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
              + + YT L+ GL+  G  +EA+ L  E+  RG L   ++
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLM 638



 Score = 46.2 bits (108), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/169 (18%), Positives = 69/169 (40%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           TF  ++ GLC  G + +A++    M   G  P   +Y  +++  C+      +  + + M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
             +    DT     +++   +     EA+ L  ++   G + D+ +Y +++ GL      
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +   L  EM+     P+ +   +L+      G  +   E+  +M   G
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+++  D+  +  ++  LC +    +S  LL+++ + G++AN   C   +    + G 
Sbjct: 202 MLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGR 261

Query: 61  PSEALSLLDEM-------------------LDSRIEVTV---------------VTFCVL 86
             EA++L++ M                    DS+++                   T+  +
Sbjct: 262 LEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTI 321

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           IDG CKSG+++EA +        G  P+   Y +LI+GLC +  IERA  LF+E   +D+
Sbjct: 322 IDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDL 381

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            PD   Y +L+ G  +      AL + N M E G   D+  Y  ++ GL + G++ +A V
Sbjct: 382 KPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAV 441

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + ++ I +G LPD     +L+  + +R  +D A++L   M   G+
Sbjct: 442 VMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGI 486



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 124/285 (43%), Gaps = 35/285 (12%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G  +  D+  Y T++ GLC +SK +++   L  M   G   +     T++D Y K+G   
Sbjct: 273 GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ 332

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA  LL + +        VT+C LI+GLC  G +  A++ F       L P++ VY +L+
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLV 392

Query: 123 DGLCKKNCIERARNLFDEMPK-----------------------------------RDMI 147
            GLC++  I  A  + +EM +                                   +  +
Sbjct: 393 KGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYL 452

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
           PD   +  LIDGY K      AL L  RM   G+  D+  Y S++ GL + G  +E    
Sbjct: 453 PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNET 512

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           F EMI +G  P+ I    L++   +   ++EA  +   M   GL+
Sbjct: 513 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLV 557



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 114/244 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  II GLC      D+ +++++    G   +     TL+D Y K  +   AL L+
Sbjct: 419 DIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLV 478

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M    I   V+T+  +++GLCK+G  +E  + F  M   G  PN   Y  LI+  CK 
Sbjct: 479 ERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKI 538

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +E A  +   M +  ++PD  ++  LI G+ ++     A  L  ++ E G     + +
Sbjct: 539 NQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTF 598

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+   S   ++Q A  +F EMI +G  PD      L+    +  N+D A     EM+ 
Sbjct: 599 NILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMIS 658

Query: 249 RGLL 252
           +G +
Sbjct: 659 KGFV 662



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 122/249 (48%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + K++K DL +Y +++ GLC +     +  +++EM E G   +      +++   K G  
Sbjct: 377 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           S+A  ++++ +       V TF  LIDG CK   +  A+    RM  +G+ P+V  Y ++
Sbjct: 437 SDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSV 496

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++GLCK    +     F+EM  +   P+   Y  LI+ + K    +EA  +  RM + G+
Sbjct: 497 LNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGL 556

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D  ++ +L+ G  R G L  A +LF ++  +G          L+  +  + NM  A +
Sbjct: 557 VPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 616

Query: 242 LQNEMMGRG 250
           +  EM+ +G
Sbjct: 617 IFGEMISKG 625



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 105/251 (41%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   +   +   C+  +   +  LL  + E G  A      T++   +  G 
Sbjct: 132 MLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGH 191

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L DEML   +   V TF  ++  LC+ G V E+     ++   G+  N      
Sbjct: 192 GYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNI 251

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I GLC+   +E A  L + M    + PD   Y  L+ G  K    +EA     RM   G
Sbjct: 252 WIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQG 310

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +++ G  + G LQEA  L  + + +G +PD +   SL+      G+++ A+
Sbjct: 311 CIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERAL 370

Query: 241 ELQNEMMGRGL 251
           EL NE   + L
Sbjct: 371 ELFNEAQAKDL 381



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 92/210 (43%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + T+I G C   K + +  L+  M   G+  + +   ++++   KAG+  E     
Sbjct: 454 DVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETF 513

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM+        +T+ +LI+  CK   + EA     RM   GL P+   +  LI G C+ 
Sbjct: 514 EEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRN 573

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  LF ++ ++        +  LI  Y    + + A  +   M   G   DL  Y
Sbjct: 574 GDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTY 633

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
             LV GL +  ++  A     EMI +G +P
Sbjct: 634 RILVDGLCKAANVDRAYAHLAEMISKGFVP 663



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 80/169 (47%)

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           +   I    ++G +R A+D F RM  F   P    Y A++D L      ++A  ++  M 
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
              + PD   +T  +  +        AL L   ++E G D    AY ++V GL   GH  
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            AR LF EM+GR + PD     ++L    ++G++ E+  L  +++ RG+
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGM 242



 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 90/216 (41%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+  Y +++ GLC   K ++      EM   G   N +    L++ + K  +  EA 
Sbjct: 486 IAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 545

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            ++  M    +    V+F  LI G C++G +  A   F ++ + G       +  LI   
Sbjct: 546 GVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAY 605

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
             K  ++ A  +F EM  +   PD   Y  L+DG  K  +   A      M   G    +
Sbjct: 606 SSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSM 665

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
             +  ++  L+    + EA  + H M+  G++P+ +
Sbjct: 666 ATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVV 701



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 5/206 (2%)

Query: 49  TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
             +MDA   A    +A  +   ML + +     T  V +   C +G    A+     + +
Sbjct: 110 NAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSE 169

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            G     A Y  ++ GL        AR+LFDEM  RD+ PD   +  ++    +     E
Sbjct: 170 RGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVME 229

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVW--GLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           +  L  ++ + G  +  N +T  +W  GL   G L+EA  L   M G  + PD +   +L
Sbjct: 230 SGALLAKVLKRG--MSANKFTCNIWIRGLCEDGRLEEAVALVERM-GAYVAPDVVTYNTL 286

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLL 252
           ++   +   + EA +    MM +G +
Sbjct: 287 MRGLCKDSKVQEAAQYLGRMMNQGCI 312


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 35/280 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           KA    Y  +I GL      E +  LL EM+  G+    V   TL+D  FK G    A  
Sbjct: 297 KASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQV 356

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
             DEM    +   ++T+  LI+G CK+G +++A+  FG +   GL P V  Y  LIDG C
Sbjct: 357 KFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYC 416

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY--------------------LKHESF 166
           +   +E AR L +EM + D +PD   YT L++G                     L+ + F
Sbjct: 417 RLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCF 476

Query: 167 K---------------EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
                            A  L+  M   G+  D   Y  L+ GL + G L++A VL+ +M
Sbjct: 477 AYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKM 536

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  G+  D +    L+  H ERG + EA  + + M+  GL
Sbjct: 537 VTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGL 576



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 117/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++   D+  Y  ++ G C+       ++   EM   GL  +     T + A    G 
Sbjct: 431 MTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGA 490

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L +EM+   I    VT+ VLIDGLCK+G +++A   + +M   GL  +   YT 
Sbjct: 491 ITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTC 550

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C++  +  A+N+FD M    + P    YT  I  Y +  +   A     +M E G
Sbjct: 551 LIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEG 610

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V+ +   Y  L+  L R G  + A   FHEM+ RG++P++     L+    + GN   AI
Sbjct: 611 VEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAI 670

Query: 241 ELQNEMMGRGL 251
            L  EM  +G+
Sbjct: 671 RLYCEMHQKGI 681



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 119/246 (48%), Gaps = 11/246 (4%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEM----KENGLTANTVICTTLM-DAYFKAGEPSEALSL 67
           Y  +I GL  + + E +  L+  M    K +  T N +I   L  D   KAG      +L
Sbjct: 269 YNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAG------AL 322

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L EM +  I  TVVT+  LIDGL K+G    A   F  M   GL P++  Y +LI+G CK
Sbjct: 323 LLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCK 382

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +++A  LF ++ +  + P    Y  LIDGY +    + A  LK  MTE     D+  
Sbjct: 383 AGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCT 442

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YT L+ G     +L   R+ F EM+ +G+ PD     + +      G +  A +L+ EMM
Sbjct: 443 YTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMM 502

Query: 248 GRGLLS 253
            RG+ S
Sbjct: 503 LRGISS 508



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 1/201 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I +D   Y  +I GLC     +D+ +L  +M  +GL  + V  T L+ A+ + G   E
Sbjct: 504 RGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIE 563

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A ++ D M+ S +  +VVT+ + I   C+ G +  A  +F +M + G+ PN   Y  L+ 
Sbjct: 564 AKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMH 623

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LC+    E A   F EM +R ++P+   YT LIDG  K  ++  A+ L   M + G+  
Sbjct: 624 ALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHP 683

Query: 184 DLNAYTSLVWGLSRCGHLQEA 204
           D   + +L  G    GH+ +A
Sbjct: 684 DHCTHNALFKGFGE-GHMYDA 703



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 122/265 (46%), Gaps = 38/265 (14%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV--- 80
           ++++D + + S+M + G+  +     TL+D++ KAG   +A++LL +M ++R    +   
Sbjct: 208 ARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDM-EARAAGCLPND 266

Query: 81  VTFCVLIDGLCKSG------------------------------LVREAIDYFG----RM 106
           VT+ V+I+GL + G                              L R+ ++  G     M
Sbjct: 267 VTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEM 326

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
            + G+ P V  Y  LIDGL K    E A+  FDEM  + ++PD   Y +LI+GY K  + 
Sbjct: 327 ENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNL 386

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           K+AL L   +   G+   +  Y  L+ G  R G L+ AR L  EM     LPD      L
Sbjct: 387 KQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTIL 446

Query: 227 LKKHYERGNMDEAIELQNEMMGRGL 251
           +       N+       +EM+ +GL
Sbjct: 447 MNGSCMVRNLAMVRIFFDEMLSKGL 471



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 3/221 (1%)

Query: 33  LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
             EM  +G+      C  ++     A    +  ++  +ML   +E ++ T+  L+D  CK
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 93  SGLVREAIDYFGRMP--DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           +G + +A+     M     G  PN   Y  +I+GL +K  +E+A  L D M +       
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASA 300

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LI G L  +  ++A  L   M   G+   +  Y +L+ GL + G+ + A+V F E
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M  +G+LPD I   SL+  + + GN+ +A+ L  ++   GL
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGL 401



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 2/249 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y T I          ++  L  EM   G++++TV    L+D   K G 
Sbjct: 466 MLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  +M+   + +  VT+  LI   C+ G + EA + F  M   GL P+V  YT 
Sbjct: 526 LKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTI 585

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I   C++  +  A   F +M +  + P+   Y  L+    +    + A    + M E G
Sbjct: 586 FIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERG 645

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT L+ G  + G+   A  L+ EM  +GI PD     +L K  +  G+M +A+
Sbjct: 646 LVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKG-FGEGHMYDAV 704

Query: 241 E-LQNEMMG 248
           + L+N ++G
Sbjct: 705 QYLENVVLG 713


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 45/281 (16%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+    +I++G C   K  ++ +L  EM E GL  N V   T++++ FK+G   EA 
Sbjct: 352 IMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAF 411

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  +M+   I   +VT   ++DGL K G  +EA + F  +    L PN   Y+AL+DG 
Sbjct: 412 NLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGY 471

Query: 126 C-----------------------------------KKNCIERARNLFDEMPKRDMIPDT 150
           C                                   KK  + +A ++  EM +R+++P+T
Sbjct: 472 CKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT 531

Query: 151 TAYTALIDGYLKHESFKEALNL-----KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             Y  LIDGY K      A +        R+ E  V  D+     L+  L R G + EAR
Sbjct: 532 IVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDI-----LLNNLKRVGRMDEAR 586

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            L  +M  +GI PD +   SL+  +++ GN   A+ +  EM
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM 627



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 131/248 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KN++  L  Y T+I   C     E+S  L  +M  NG+  + V C++++  + + G+ +E
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L  EM +  ++   V++  +I+ L KSG V EA +   +M   G+  ++   T ++D
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K    + A  +F+ + K ++ P+   Y+AL+DGY K    + A  +  +M +  V  
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  ++S++ G ++ G L +A  +  EM+ R ++P+ I+   L+  +++ G  D A +  
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 554

Query: 244 NEMMGRGL 251
            EM  R L
Sbjct: 555 KEMKSRRL 562



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 131/251 (52%), Gaps = 1/251 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+  +   Y  ++ G C   K E ++L+L +M++  +  N +  +++++ Y K G  S+A
Sbjct: 456 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 515

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + +L EM+   +    + + +LIDG  K+G    A D+   M    L  +  ++  L++ 
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNN 575

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L +   ++ AR+L  +M  + + PD   Y +LIDGY K  +   AL++   M E  +  D
Sbjct: 576 LKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFD 635

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           + AY +L+ GL R G   + R +   MI  G+ PD I   +++  +  +G  ++A+++ N
Sbjct: 636 VVAYNALIKGLLRLGK-YDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILN 694

Query: 245 EMMGRGLLSGS 255
           EM   G++  +
Sbjct: 695 EMKSYGIMPNA 705



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 132/295 (44%), Gaps = 41/295 (13%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK KNI+ D+  Y  +I GL    K+ D + + S M E GL  + +   T+++ Y   G+
Sbjct: 627 MKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELGLAPDCITYNTIINTYCIKGK 685

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY------FGR--------- 105
             +AL +L+EM    I    VT+ +LI GLCK+G V   I +      + R         
Sbjct: 686 TEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQ 745

Query: 106 ---------------------MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
                                M   G+  ++  Y ALI G C  + +E+A   + +M   
Sbjct: 746 IHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVD 805

Query: 145 DMIPDTTAYTALIDGY----LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
            + P+ T Y  L+ G     L  E  +E   L + M E G+  +   Y  LV G  R G+
Sbjct: 806 GIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGN 865

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            ++  +L  EMI +G +P       L+  + + G M EA EL N+++ +G +  S
Sbjct: 866 RKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNS 920



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 130/270 (48%), Gaps = 20/270 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +++  ++  + +II G   +     +  +L EM +  +  NT++   L+D YFKAGE
Sbjct: 487 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 546

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM   R+E + V F +L++ L + G + EA      M   G+ P++  Y +
Sbjct: 547 QDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K+     A ++  EM ++++  D  AY ALI G L+   + +   + +RM E+G
Sbjct: 607 LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELG 665

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI--------LCIS------- 225
           +  D   Y +++      G  ++A  + +EM   GI+P+ +        LC +       
Sbjct: 666 LAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPI 725

Query: 226 ---LLKKHYERG-NMDEAIELQNEMMGRGL 251
               L K Y R    D+ +++  +++  GL
Sbjct: 726 THKFLVKAYSRSEKADKILQIHEKLVASGL 755



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 45/291 (15%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTV--------ICTT------- 50
           +  D   Y TII   CI+ K ED+  +L+EMK  G+  N V        +C T       
Sbjct: 666 LAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPI 725

Query: 51  ----LMDAYFKAGEPSEALSL-----------------LDEMLDSRIEVTVVTFCVLIDG 89
               L+ AY ++ +  + L +                 LDEM+   I   +VT+  LI G
Sbjct: 726 THKFLVKAYSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRG 785

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR----NLFDEMPKRD 145
            C    V +A+  + +M   G+ PN+  Y  L+ GL     +E        L  EM +R 
Sbjct: 786 YCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERG 845

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           ++P+   Y  L+ GY +  + K+ + L   M   G    L  Y  L+   ++ G + EAR
Sbjct: 846 LVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEAR 905

Query: 206 VLFHEMIGRGILPD----EILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L ++++ +G +P+    +IL    L   YE   +D +++   E+  + LL
Sbjct: 906 ELLNDLLTKGRIPNSFTYDILTCGWLNLSYE-PEIDRSLKRSYEIEVKKLL 955



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 19/270 (7%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-----KENGLTANTVIC----------- 48
           ++K D+  Y T++   C       ++ L +E+      E+ L  N V+            
Sbjct: 262 DVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTL 321

Query: 49  ---TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
              TTL+ AY K     E+ SL  +M+ + I   VVT   ++ G C+ G + EA   F  
Sbjct: 322 VTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFRE 381

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M + GL PN   Y  +I+ L K   +  A NL  +M  R +  D    T ++DG  K   
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            KEA  +   + ++ +  +   Y++L+ G  + G ++ A ++  +M    + P+ I   S
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           ++  + ++G + +A+++  EM+ R ++  +
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNT 531



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 113/293 (38%), Gaps = 89/293 (30%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+IWG C +   +    LLSEM + GL  +++ C                        
Sbjct: 165 YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCN----------------------- 201

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG-------- 124
                       +L+ G C+ GLV+ A      + D G+  +V     LIDG        
Sbjct: 202 ------------ILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMS 249

Query: 125 ---------------------------LCKKNCIERARNLFDEM---------------- 141
                                       CK   + RA +LF+E+                
Sbjct: 250 QATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVV 309

Query: 142 ---PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
                +++ P    YT LI  Y K    +E+ +L  +M   G+  D+   +S+++G  R 
Sbjct: 310 TQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRH 369

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G L EA VLF EM   G+ P+ +   +++   ++ G + EA  LQ++M+ RG+
Sbjct: 370 GKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGI 422



 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 112/305 (36%), Gaps = 56/305 (18%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +   LP + T+++           KL+ S+M   G+  +      L+ +  K G+
Sbjct: 85  MRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGD 144

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-------------- 106
              AL  L    +  +++  VT+  +I G C+ GLV +       M              
Sbjct: 145 LDLALGYLRN--NDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNI 202

Query: 107 ---------------------PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                 D G+  +V     LIDG C+   + +A  L +   + D
Sbjct: 203 LVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSD 262

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD-------------------LN 186
           +  D   Y  L+  + K      A +L N +     D D                   L 
Sbjct: 263 VKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLV 322

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YT+L+    +   ++E+  L+ +MI  GI+PD + C S+L      G + EA  L  EM
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM 382

Query: 247 MGRGL 251
              GL
Sbjct: 383 YEMGL 387



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 2/239 (0%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           +  + T+I       +F  +    S M+  GL        TL+  +  +G  S+   +  
Sbjct: 59  VSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYS 118

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           +ML   +   V +  VL+  LCK G +  A+ Y  R  D     NV  Y  +I G C+K 
Sbjct: 119 DMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYL-RNNDVVDIDNVT-YNTVIWGFCQKG 176

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +++   L  EM KR +  D+     L+ GY +    + A  +   + + GV  D+    
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           +L+ G      + +A  L        +  D +   +LLK   + G++  A  L NE++G
Sbjct: 237 TLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILG 295


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+ +Y TII G+C E   E +  +L+ M   GL  N V   T++     A  
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM      +  VTF +L+D  C++GLV   I+   +M   G  P+V  YT 
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK+  I+ A  L   M      P+T +YT ++ G      + +A  L ++M + G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + +L+  L + G +++A  L  +M+  G  PD I   +++    + G  +EA+
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516

Query: 241 ELQNEMMGRGL 251
           EL N M+ +G+
Sbjct: 517 ELLNVMVNKGI 527



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 122/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ GLC   ++++++ LLSEM +     + V    L+D + + G 
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL++ML       V+T+  +I+G CK GL+ EA+     M   G  PN   YT 
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC       A  L  +M ++   P+   +  LI+   K    ++A+ L  +M   G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL +Y++++ GL + G  +EA  L + M+ +GI P+ I+  S+       G +++ I
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 241 EL 242
           ++
Sbjct: 552 QM 553



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +AD+  Y  ++ GLC+  ++ D + L+ EM       N V   TL+    + G       
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L +M +      +  +  +IDG+CK G +  A +   RMP +GL PNV  Y  ++ GLC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 127 ----------------KKNC-------------------IERARNLFDEMPKRDMIPDTT 151
                           +K+C                   ++R   L ++M     +PD  
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT +I+G+ K     EA+ L   M+  G   +  +YT ++ GL   G   +A  L  +M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I +G  P+ +   +L+    ++G +++AIEL  +M+  G
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 114/244 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NTV  T ++     AG   +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+        VTF  LI+ LCK GLV +AI+   +M   G  P++  Y+ +IDGL K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              E A  L + M  + + P+T  Y+++     +     + + + + + +  +  D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L +      A   F  M+  G +P+E     L+K     G   EA EL +E+  
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629

Query: 249 RGLL 252
           RG L
Sbjct: 630 RGAL 633



 Score =  100 bits (248), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K      P+Y  I+   C    F +S  +L  M   G T +T  C  +++A  + G 
Sbjct: 137 MSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGC 196

Query: 61  PSEALSLL-------------------------------DEMLDSRIEV----TVVTFCV 85
             EA+ LL                               +E++D  + V     +VTF  
Sbjct: 197 VDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNT 256

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI  LC++GL     +   +M + G  P++ +Y  +IDG+CK+  +E A  + + MP   
Sbjct: 257 LIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYG 316

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + P+   Y  ++ G    E +KEA  L + M +    LD   +  LV    + G +    
Sbjct: 317 LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVI 376

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            L  +M+  G +PD I   +++    + G +DEA+ L   M   G
Sbjct: 377 ELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 108/222 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K +   Y  ++ GLC   ++ D++ L+S+M + G   N V   TL++   K G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL +ML +     ++++  +IDGL K+G   EA++    M + G+ PN  +Y++
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +   L ++  + +   +FD +    +  D   Y A+I    K      A++    M   G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
              + + YT L+ GL+  G  +EA+ L  E+  RG L   ++
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLM 638



 Score = 46.2 bits (108), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/169 (18%), Positives = 69/169 (40%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           TF  ++ GLC  G + +A++    M   G  P   +Y  +++  C+      +  + + M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
             +    DT     +++   +     EA+ L  ++   G + D+ +Y +++ GL      
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +   L  EM+     P+ +   +L+      G  +   E+  +M   G
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 127/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K ++  YGT++ G   +    +   LL  M  NG+  N  + + L+ AY K G+
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ +  +M    +    VT+  +I  LCKSG V +A+ YF +M D  L P   VY +
Sbjct: 390 VDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNS 449

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC  +  ++A+ L  EM  R +  DT  + ++ID + K     E+  L + M  +G
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 509

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y++L+ G    G + EA  L   M+  G+ PD +   +L+  + +   M++A+
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 570 VLFREMESSGV 580



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y +II  LC     + +  +L+ M +NG+  N     +++  Y  +G+
Sbjct: 225 MLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQ 284

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L+D LCK+G   EA   F  M   GL P +  Y  
Sbjct: 285 PKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGT 344

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + P+   ++ LI  Y K     +A+ + ++M + G
Sbjct: 345 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   Y +++  L + G +++A   F +MI   + P  I+  SL+         D+A 
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAK 464

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 465 ELILEMLDRGI 475



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 125/253 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G +   D+  Y T+I G   E   + +     EM + G+  N V  ++++ A  KA    
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ +L  M+ + +     T+  ++ G C SG  +EAI +  +M   G+ P+V  Y +L+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           D LCK      AR +FD M KR + P+ T Y  L+ GY    +  E   L + M   G+ 
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +   ++ L+   ++ G + +A ++F +M  +G+ PD +   +++    + G +++A+  
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 243 QNEMMGRGLLSGS 255
             +M+   L  G+
Sbjct: 432 FEQMIDERLSPGN 444



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 102/200 (51%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y ++I  LCI  K++ +K L+ EM + G+  +T+   +++D++ K G   E+  L D M
Sbjct: 446 VYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLM 505

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++  ++T+  LIDG C +G + EA      M   G+ P+   Y  LI+G CK + +
Sbjct: 506 VRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRM 565

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           E A  LF EM    + PD   Y  ++ G  +      A  L   +TE G  L+L+ Y  +
Sbjct: 566 EDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNII 625

Query: 192 VWGLSRCGHLQEARVLFHEM 211
           + GL +     EA  +F  +
Sbjct: 626 LHGLCKNNLTDEALRMFQNL 645



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y +++  LC   +  +++ +   M + GL        TL+  Y   G 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD M+ + I      F +LI    K G V +A+  F +M   GL+P+   Y  
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCK   +E A   F++M    + P    Y +LI      + + +A  L   M + G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD   + S++    + G + E+  LF  M+  G+ PD I   +L+  +   G MDEA 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 241 ELQNEMMGRGL 251
           +L   M+  G+
Sbjct: 535 KLLASMVSVGM 545



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 98/208 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D   YGT+I  LC   + ED+     +M +  L+   ++  +L+ +     +
Sbjct: 400 MRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDK 459

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EMLD  I +  + F  +ID  CK G V E+   F  M   G+ P++  Y+ 
Sbjct: 460 WDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L   M    M PD   Y  LI+GY K    ++AL L   M   G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  D+  Y  ++ GL +      A+ L+
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELY 607



 Score = 84.3 bits (207), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 102/219 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D   + +II   C E +  +S+ L   M   G+  + +  +TL+D Y  AG+
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGK 529

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M+   ++   VT+  LI+G CK   + +A+  F  M   G+ P++  Y  
Sbjct: 530 MDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNI 589

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GL +      A+ L+  + +     + + Y  ++ G  K+    EAL +   +    
Sbjct: 590 ILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           + L+   +  ++  L + G   EA+ LF  +   G++PD
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 688



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 113/234 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T+I G C+  K +++  LL+ M   G+  + V   TL++ Y K     +AL
Sbjct: 510 VKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDAL 569

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM  S +   ++T+ +++ GL ++     A + +  + + G    ++ Y  ++ GL
Sbjct: 570 VLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGL 629

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N  + A  +F  +   D+  +T  +  +I   LK     EA +L   ++  G+  D+
Sbjct: 630 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDV 689

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y+ +   L   G L+E   LF  M   G   +  +  S+++K  +RG++  A
Sbjct: 690 RTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRA 743



 Score = 80.5 bits (197), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 3/197 (1%)

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID-YFGRMPDFGLHPNVA 116
           AG      + L  ++     V  + F  L+ GLC      +A+D    RM   G  PNV 
Sbjct: 104 AGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVF 163

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKR--DMIPDTTAYTALIDGYLKHESFKEALNLKN 174
            Y  L+ GLC +N  + A  L   MP    D  PD  +YT +I+G+ K     +A    +
Sbjct: 164 SYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            M + G+  ++  Y+S++  L +   + +A  +   M+  G++P+     S++  +   G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283

Query: 235 NMDEAIELQNEMMGRGL 251
              EAI    +M   G+
Sbjct: 284 QPKEAIGFLKKMHSDGV 300


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 125/258 (48%), Gaps = 19/258 (7%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+IWG C +   +    LLSEM + GL  +++ C  L+  Y + G    A  ++  ++
Sbjct: 165 YNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV 224

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D  +   V+    LIDG C++GL+ +A +         +  ++  Y  L+   CK   + 
Sbjct: 225 DGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLT 284

Query: 133 RARNLFDEM-------------------PKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
           RA +LF+E+                     +++ P    YT LI  Y K    +E+ +L 
Sbjct: 285 RAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLY 344

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
            +M   G+  D+   +S+++G  R G L EA VLF EM   G+ P+ +   +++   ++ 
Sbjct: 345 KKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKS 404

Query: 234 GNMDEAIELQNEMMGRGL 251
           G + EA  LQ++M+ RG+
Sbjct: 405 GRVMEAFNLQSQMVVRGI 422



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 45/281 (16%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  D+    +I++G C   K  ++ +L  EM E GL  N V   T++++ FK+G   EA 
Sbjct: 352 IMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAF 411

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  +M+   I   +VT   ++DGL K G  +EA + F  +    L PN   Y+AL+DG 
Sbjct: 412 NLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGY 471

Query: 126 C-----------------------------------KKNCIERARNLFDEMPKRDMIPDT 150
           C                                   KK  + +A ++  EM +R+++P+T
Sbjct: 472 CKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNT 531

Query: 151 TAYTALIDGYLKHESFKEALNL-----KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             Y  LIDGY K      A +        R+ E  V  D+     L+  L R G + EAR
Sbjct: 532 IVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDI-----LLNNLKRVGRMDEAR 586

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            L  +M  +GI PD +   SL+  +++ GN   A+ +  EM
Sbjct: 587 SLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEM 627



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 131/248 (52%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           KN++  L  Y T+I   C     E+S  L  +M  NG+  + V C++++  + + G+ +E
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  L  EM +  ++   V++  +I+ L KSG V EA +   +M   G+  ++   T ++D
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K    + A  +F+ + K ++ P+   Y+AL+DGY K    + A  +  +M +  V  
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           ++  ++S++ G ++ G L +A  +  EM+ R ++P+ I+   L+  +++ G  D A +  
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 554

Query: 244 NEMMGRGL 251
            EM  R L
Sbjct: 555 KEMKSRRL 562



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 130/285 (45%), Gaps = 34/285 (11%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + ++    ++  ++  L    + ++++ L+ +M   G+  + V   +L+D YFK G 
Sbjct: 557 MKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 616

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGL------------------------------ 90
              ALS++ EM +  I   VV +  LI GL                              
Sbjct: 617 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTI 676

Query: 91  ----CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
               C  G   +A+D    M  +G+ PN   Y  LI GLCK   +E+A +  DEM   + 
Sbjct: 677 INTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEF 736

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
           +P    +  L+  Y + E   + L +  ++   G++L L  Y +L+    R G  ++A+V
Sbjct: 737 VPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKV 796

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  EM+ RGI  D +   +L++ +    ++++A++  ++M   G+
Sbjct: 797 VLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGI 841



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 131/251 (52%), Gaps = 1/251 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+  +   Y  ++ G C   K E ++L+L +M++  +  N +  +++++ Y K G  S+A
Sbjct: 456 NLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKA 515

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           + +L EM+   +    + + +LIDG  K+G    A D+   M    L  +  ++  L++ 
Sbjct: 516 VDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNN 575

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L +   ++ AR+L  +M  + + PD   Y +LIDGY K  +   AL++   M E  +  D
Sbjct: 576 LKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFD 635

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           + AY +L+ GL R G   + R +   MI  G+ PD I   +++  +  +G  ++A+++ N
Sbjct: 636 VVAYNALIKGLLRLGK-YDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILN 694

Query: 245 EMMGRGLLSGS 255
           EM   G++  +
Sbjct: 695 EMKSYGIMPNA 705



 Score =  102 bits (255), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 119/255 (46%), Gaps = 4/255 (1%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   Y TII   CI+ K ED+  +L+EMK  G+  N V    L+    K G   +A 
Sbjct: 666 LAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAE 725

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S LDEML      T +T   L+    +S    + +    ++   GL  ++ VY  LI   
Sbjct: 726 SALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVF 785

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C+     +A+ + DEM KR +  D   Y ALI GY      ++AL   ++M   G+  ++
Sbjct: 786 CRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNI 845

Query: 186 NAYTSLVWGLSRCG----HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             Y +L+ GLS  G     ++E   L  EM  RG++P+      L+  +   GN  + I 
Sbjct: 846 TTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTII 905

Query: 242 LQNEMMGRGLLSGSK 256
           L  EM+ +G +   K
Sbjct: 906 LHIEMITKGFVPTLK 920



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 1/247 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +++  ++  + +II G   +     +  +L EM +  +  NT++   L+D YFKAGE
Sbjct: 487 MEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGE 546

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM   R+E + V F +L++ L + G + EA      M   G+ P++  Y +
Sbjct: 547 QDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYAS 606

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K+     A ++  EM ++++  D  AY ALI G L+   + +   + +RM E+G
Sbjct: 607 LIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKY-DPRYVCSRMIELG 665

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +++      G  ++A  + +EM   GI+P+ +    L+    + G +++A 
Sbjct: 666 LAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAE 725

Query: 241 ELQNEMM 247
              +EM+
Sbjct: 726 SALDEML 732



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 19/270 (7%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-----KENGLTANTVIC----------- 48
           ++K D+  Y T++   C       ++ L +E+      E+ L  N V+            
Sbjct: 262 DVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTL 321

Query: 49  ---TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
              TTL+ AY K     E+ SL  +M+ + I   VVT   ++ G C+ G + EA   F  
Sbjct: 322 VTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFRE 381

Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
           M + GL PN   Y  +I+ L K   +  A NL  +M  R +  D    T ++DG  K   
Sbjct: 382 MYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGK 441

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
            KEA  +   + ++ +  +   Y++L+ G  + G ++ A ++  +M    + P+ I   S
Sbjct: 442 TKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSS 501

Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
           ++  + ++G + +A+++  EM+ R ++  +
Sbjct: 502 IINGYAKKGMLSKAVDVLREMVQRNVMPNT 531



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 9/222 (4%)

Query: 39  NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
           +GL  +  +  TL+  + + G   +A  +LDEM+   I   +VT+  LI G C    V +
Sbjct: 769 SGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEK 828

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR----NLFDEMPKRDMIPDTTAYT 154
           A+  + +M   G+ PN+  Y  L+ GL     +E        L  EM +R ++P+   Y 
Sbjct: 829 ALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYD 888

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
            L+ GY +  + K+ + L   M   G    L  Y  L+   ++ G + EAR L ++++ +
Sbjct: 889 ILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTK 948

Query: 215 GILPD----EILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G +P+    +IL    L   YE   +D +++   E+  + LL
Sbjct: 949 GRIPNSFTYDILTCGWLNLSYE-PEIDRSLKRSYEIEVKKLL 989



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 114/303 (37%), Gaps = 52/303 (17%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +   LP + T+++           KL+ S+M   G+  +      L+ +  K G+
Sbjct: 85  MRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGD 144

Query: 61  PSEAL---------------------------------SLLDEMLDSRIEVTVVTFCVLI 87
              AL                                  LL EM+   +    +T  +L+
Sbjct: 145 LDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILV 204

Query: 88  DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
            G C+ GLV+ A      + D G+  +V     LIDG C+   + +A  L +   + D+ 
Sbjct: 205 KGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVK 264

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD-------------------LNAY 188
            D   Y  L+  + K      A +L N +     D D                   L  Y
Sbjct: 265 IDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTY 324

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L+    +   ++E+  L+ +MI  GI+PD + C S+L      G + EA  L  EM  
Sbjct: 325 TTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYE 384

Query: 249 RGL 251
            GL
Sbjct: 385 MGL 387



 Score = 65.1 bits (157), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 102/239 (42%), Gaps = 2/239 (0%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           +  + T+I       +F  +    S M+  GL        TL+  +  +G  S+   +  
Sbjct: 59  VSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYS 118

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           +ML   +   V +  VL+  LCK G +  A+ Y  R  D     NV  Y  +I G C+K 
Sbjct: 119 DMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYL-RNNDVVDIDNVT-YNTVIWGFCQKG 176

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            +++   L  EM KR +  D+     L+ GY +    + A  +   + + GV  D+    
Sbjct: 177 LVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLN 236

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           +L+ G    G + +A  L        +  D +   +LLK   + G++  A  L NE++G
Sbjct: 237 TLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILG 295



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 41/93 (44%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L+SEM E GL  N      L+  Y + G   + + L  EM+      T+ T+ VLI    
Sbjct: 871 LVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYA 930

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           KSG + EA +    +   G  PN   Y  L  G
Sbjct: 931 KSGKMIEARELLNDLLTKGRIPNSFTYDILTCG 963


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+ +Y TII G+C E   E +  +L+ M   GL  N V   T++     A  
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM      +  VTF +L+D  C++GLV   I+   +M   G  P+V  YT 
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK+  I+ A  L   M      P+T +YT ++ G      + +A  L ++M + G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + +L+  L + G +++A  L  +M+  G  PD I   +++    + G  +EA+
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516

Query: 241 ELQNEMMGRGL 251
           EL N M+ +G+
Sbjct: 517 ELLNVMVNKGI 527



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 122/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ GLC   ++++++ LLSEM +     + V    L+D + + G 
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL++ML       V+T+  +I+G CK GL+ EA+     M   G  PN   YT 
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC       A  L  +M ++   P+   +  LI+   K    ++A+ L  +M   G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL +Y++++ GL + G  +EA  L + M+ +GI P+ I+  S+       G +++ I
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 241 EL 242
           ++
Sbjct: 552 QM 553



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +AD+  Y  ++ GLC+  ++ D + L+ EM       N V   TL+    + G       
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L +M +      +  +  +IDG+CK G +  A +   RMP +GL PNV  Y  ++ GLC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 127 ----------------KKNC-------------------IERARNLFDEMPKRDMIPDTT 151
                           +K+C                   ++R   L ++M     +PD  
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT +I+G+ K     EA+ L   M+  G   +  +YT ++ GL   G   +A  L  +M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I +G  P+ +   +L+    ++G +++AIEL  +M+  G
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 114/244 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NTV  T ++     AG   +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+        VTF  LI+ LCK GLV +AI+   +M   G  P++  Y+ +IDGL K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              E A  L + M  + + P+T  Y+++     +     + + + + + +  +  D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L +      A   F  M+  G +P+E     L+K     G   EA EL +E+  
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629

Query: 249 RGLL 252
           RG L
Sbjct: 630 RGAL 633



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 35/275 (12%)

Query: 11  PLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL-- 68
           P+Y  I+   C    F +S  +L  M   G T +T  C  +++A  + G   EA+ LL  
Sbjct: 147 PMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK 206

Query: 69  -----------------------------DEMLDSRIEV----TVVTFCVLIDGLCKSGL 95
                                        +E++D  + V     +VTF  LI  LC++GL
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
                +   +M + G  P++ +Y  +IDG+CK+  +E A  + + MP   + P+   Y  
Sbjct: 267 FERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           ++ G    E +KEA  L + M +    LD   +  LV    + G +     L  +M+  G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +PD I   +++    + G +DEA+ L   M   G
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K +   Y  ++ GLC   ++ D++ L+S+M + G   N V   TL++   K G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL +ML +     ++++  +IDGL K+G   EA++    M + G+ PN  +Y++
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +   L ++  + +   +FD +    +  D   Y A+I    K      A++    M   G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
              + + YT L+ GL+  G  +EA+ L  E+  RG L
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/169 (18%), Positives = 69/169 (40%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           TF  ++ GLC  G + +A++    M   G  P   +Y  +++  C+      +  + + M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
             +    DT     +++   +     EA+ L  ++   G + D+ +Y +++ GL      
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +   L  EM+     P+ +   +L+      G  +   E+  +M   G
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+ +Y TII G+C E   E +  +L+ M   GL  N V   T++     A  
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAER 336

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM      +  VTF +L+D  C++GLV   I+   +M   G  P+V  YT 
Sbjct: 337 WKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTT 396

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+G CK+  I+ A  L   M      P+T +YT ++ G      + +A  L ++M + G
Sbjct: 397 VINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   + +L+  L + G +++A  L  +M+  G  PD I   +++    + G  +EA+
Sbjct: 457 CPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEAL 516

Query: 241 ELQNEMMGRGL 251
           EL N M+ +G+
Sbjct: 517 ELLNVMVNKGI 527



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 122/242 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K ++  Y T++ GLC   ++++++ LLSEM +     + V    L+D + + G 
Sbjct: 312 MPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGL 371

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               + LL++ML       V+T+  +I+G CK GL+ EA+     M   G  PN   YT 
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC       A  L  +M ++   P+   +  LI+   K    ++A+ L  +M   G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              DL +Y++++ GL + G  +EA  L + M+ +GI P+ I+  S+       G +++ I
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 241 EL 242
           ++
Sbjct: 552 QM 553



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 35/279 (12%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           +AD+  Y  ++ GLC+  ++ D + L+ EM       N V   TL+    + G       
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L +M +      +  +  +IDG+CK G +  A +   RMP +GL PNV  Y  ++ GLC
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 127 ----------------KKNC-------------------IERARNLFDEMPKRDMIPDTT 151
                           +K+C                   ++R   L ++M     +PD  
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT +I+G+ K     EA+ L   M+  G   +  +YT ++ GL   G   +A  L  +M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I +G  P+ +   +L+    ++G +++AIEL  +M+  G
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 114/244 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C E   +++ +LL  M   G   NTV  T ++     AG   +A  L+
Sbjct: 390 DVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELM 449

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+        VTF  LI+ LCK GLV +AI+   +M   G  P++  Y+ +IDGL K 
Sbjct: 450 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 509

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              E A  L + M  + + P+T  Y+++     +     + + + + + +  +  D   Y
Sbjct: 510 GKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++  L +      A   F  M+  G +P+E     L+K     G   EA EL +E+  
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629

Query: 249 RGLL 252
           RG L
Sbjct: 630 RGAL 633



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 35/275 (12%)

Query: 11  PLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL-- 68
           P+Y  I+   C    F +S  +L  M   G T +T  C  +++A  + G   EA+ LL  
Sbjct: 147 PMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRK 206

Query: 69  -----------------------------DEMLDSRIEV----TVVTFCVLIDGLCKSGL 95
                                        +E++D  + V     +VTF  LI  LC++GL
Sbjct: 207 LAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGL 266

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
                +   +M + G  P++ +Y  +IDG+CK+  +E A  + + MP   + P+   Y  
Sbjct: 267 FERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNT 326

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           ++ G    E +KEA  L + M +    LD   +  LV    + G +     L  +M+  G
Sbjct: 327 VLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG 386

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +PD I   +++    + G +DEA+ L   M   G
Sbjct: 387 CMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG 421



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K +   Y  ++ GLC   ++ D++ L+S+M + G   N V   TL++   K G 
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL +ML +     ++++  +IDGL K+G   EA++    M + G+ PN  +Y++
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +   L ++  + +   +FD +    +  D   Y A+I    K      A++    M   G
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
              + + YT L+ GL+  G  +EA+ L  E+  RG L
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL 633



 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/169 (18%), Positives = 69/169 (40%)

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           TF  ++ GLC  G + +A++    M   G  P   +Y  +++  C+      +  + + M
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
             +    DT     +++   +     EA+ L  ++   G + D+ +Y +++ GL      
Sbjct: 173 HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRW 232

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +   L  EM+     P+ +   +L+      G  +   E+  +M   G
Sbjct: 233 GDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHG 281


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 129/242 (53%), Gaps = 4/242 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENG--LTANTVICTTLMDAYFKAGEPSEALSLLDE 70
           Y T+I  LC +S+ +++  ++  M + G   + + V   T++  +FK GE S+A +L +E
Sbjct: 198 YNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNE 257

Query: 71  MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
           M+   +   V T+  ++D LCK+  + +A     +M D G+ P+   Y A+I G      
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH 317

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
            + +  +F +M  + +IPDT  +++ +    KH   K+A  +   MT  G   D+ +Y+ 
Sbjct: 318 WKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSI 377

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS-LLKKHYERGNMDEAIELQNEMMGR 249
           L+ G +  G   +   LFH M  +GI+ +   CI+ L+  H +RG MDEA+ +  EM G+
Sbjct: 378 LLHGYATEGRFADMNNLFHSMADKGIVSN-CHCINILISAHAKRGMMDEAMLVFTEMQGQ 436

Query: 250 GL 251
           G+
Sbjct: 437 GV 438



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 124/250 (49%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           +G     D+  + T+I G   + +   +  L +EM + G+  +     +++DA  KA   
Sbjct: 224 EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAM 283

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +A  +L +M+D  +E   VT+  +I G   SG  +E+   F +M   GL P+   +++ 
Sbjct: 284 DKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSF 343

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           +  LCK    + A  +F  M  +  +PD  +Y+ L+ GY     F +  NL + M + G+
Sbjct: 344 MSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGI 403

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             + +    L+   ++ G + EA ++F EM G+G+ P+ +   +L+      G + +A+E
Sbjct: 404 VSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAME 463

Query: 242 LQNEMMGRGL 251
             ++M+  G+
Sbjct: 464 KFSQMISIGI 473



 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D+  Y +I+  LC     + ++ +L +M + G+  + V    ++  Y  +G 
Sbjct: 258 MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGH 317

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E+  +  +M    +    VTF   +  LCK G  ++A + F  M   G  P++  Y+ 
Sbjct: 318 WKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSI 377

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   +       NLF  M  + ++ +      LI  + K     EA+ +   M   G
Sbjct: 378 LLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQG 437

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y++L+    R G L +A   F +MI  GI P+  +  SL+      G++ +A 
Sbjct: 438 VRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAK 497

Query: 241 ELQNEMMGRGL 251
           E  +EMM +GL
Sbjct: 498 EFISEMMSKGL 508



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 113/227 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + ++I G C+  K E +  +L  M   G+  + V   TL+  Y K+G+  + L L  EML
Sbjct: 551 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREML 610

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             +++ T VT+ +++DGL ++G    A   F  M D G   ++  Y  L+ GLC+ +  +
Sbjct: 611 HKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTD 670

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF ++   D   D T    +I+   K    +EA +L   ++  G+  +++ Y  ++
Sbjct: 671 EAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMI 730

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             L + G ++EA  +F  M   G  P   L   +++   ++G++ +A
Sbjct: 731 RNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 116/250 (46%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  + +II  LCIE +  D++ + + +   G     V   +L+D Y   G+  +A  
Sbjct: 510 RPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 569

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +LD M+   IE  VVT   L+ G CKSG + + +  F  M    + P    Y  ++DGL 
Sbjct: 570 VLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLL 629

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +      A+ +F EM       D   Y  L+ G  +++   EA+ L +++  +    D+ 
Sbjct: 630 RAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 689

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
              +++  L +    +EA  LF  +   G++P+      +++   + G+++EA  + + M
Sbjct: 690 ILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSM 749

Query: 247 MGRGLLSGSK 256
              G    S+
Sbjct: 750 EKSGCAPSSR 759



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 86/180 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ D+    T++ G C   K +D  +L  EM    +   TV    ++D   +AG 
Sbjct: 574 MVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGR 633

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  +  EM+DS   V + T+ +L+ GLC++ L  EAI  F ++       ++ +   
Sbjct: 634 TSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNT 693

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ L K    E A +LF  +    ++P+ + Y  +I   LK  S +EA  + + M + G
Sbjct: 694 MINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 99/225 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K ++ D   Y  II G      +++S  +  +M   GL  +TV  ++ M +  K G 
Sbjct: 293 MVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGR 352

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +   M        +V++ +L+ G    G   +  + F  M D G+  N      
Sbjct: 353 SKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINI 412

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI    K+  ++ A  +F EM  + + P+   Y+ LI  + +     +A+   ++M  +G
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
           ++ +   Y SL+ G    G L +A+    EM+ +G+    I+  S
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFS 517



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 38/238 (15%)

Query: 51  LMDAYFKAGEPSEALSLLDEML------------------------DSRIEVTV------ 80
           LMD   +A  P    + +  +L                        D  ++V +      
Sbjct: 130 LMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSEL 189

Query: 81  ------VTFCVLIDGLCKSGLVREAIDYFGRMPDFG--LHPNVAVYTALIDGLCKKNCIE 132
                 +++  +I  LC     +EA+D   RM   G    P+V  +  +I G  K+  + 
Sbjct: 190 SCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVS 249

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A NLF+EM ++ ++PD   Y +++D   K  +  +A  +  +M + GV+ D   Y +++
Sbjct: 250 KACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAII 309

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G S  GH +E+  +F +M  +G++PD +   S +    + G   +A E+   M  +G
Sbjct: 310 HGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKG 367


>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 8/259 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D   YGT+I GLC   + +++K L +EM E       V  T+L++    +  
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKN 242

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+  L+EM    IE  V T+  L+DGLCK G   +A++ F  M   G  PN+  YT 
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK+  I+ A  L D M  + + PD   Y  +I G+     F+EA N  + M   G
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362

Query: 181 V-------DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
           +       ++ +     +V GL    +   A  L+  M  RGI  +     SL+K   ++
Sbjct: 363 ITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKK 421

Query: 234 GNMDEAIELQNEMMGRGLL 252
           G   +A++L +E++  G +
Sbjct: 422 GEFQKAVQLVDEIVTDGCI 440



 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 101/208 (48%), Gaps = 1/208 (0%)

Query: 15  TIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
            +I  LC      D+ L +  EM + G   ++    TL+    + G   EA  L  EM++
Sbjct: 161 VLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVE 220

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
                TVVT+  LI+GLC S  V EA+ Y   M   G+ PNV  Y++L+DGLCK     +
Sbjct: 221 KDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQ 280

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A  LF+ M  R   P+   YT LI G  K +  +EA+ L +RM   G+  D   Y  ++ 
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEI 221
           G       +EA     EMI  GI P+ +
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPNRL 368



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 1/225 (0%)

Query: 28  DSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLI 87
           DS  +  +MK+     +     T++    +  + + A      M +  +  TV +  VLI
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163

Query: 88  DGLCKS-GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
             LC++ G V   +  F  MP  G  P+   Y  LI GLC+   I+ A+ LF EM ++D 
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P    YT+LI+G    ++  EA+     M   G++ ++  Y+SL+ GL + G   +A  
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           LF  M+ RG  P+ +   +L+    +   + EA+EL + M  +GL
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 1/243 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   +G ++  L   +KF+ ++ L+  MK      +  I  ++   Y +   P ++L + 
Sbjct: 50  DQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVF 109

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M D   + +   +  ++  L +   +  A  ++  M + GL P VA    LI  LC+ 
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169

Query: 129 N-CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           +  ++    +F EMPKR   PD+  Y  LI G  +     EA  L   M E      +  
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           YTSL+ GL    ++ EA     EM  +GI P+     SL+    + G   +A+EL   MM
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289

Query: 248 GRG 250
            RG
Sbjct: 290 ARG 292



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA-GEPSEALSLLDEM 71
           Y T++  L  E++   +      M+E GL         L+ A  +  G     L +  EM
Sbjct: 124 YVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEM 183

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
                +    T+  LI GLC+ G + EA   F  M +    P V  YT+LI+GLC    +
Sbjct: 184 PKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNV 243

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           + A    +EM  + + P+   Y++L+DG  K     +A+ L   M   G   ++  YT+L
Sbjct: 244 DEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTL 303

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL +   +QEA  L   M  +G+ PD  L   ++          EA    +EM+  G+
Sbjct: 304 ITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGI 363



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 8/176 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + ++  Y T+I GLC E K +++  LL  M   GL  +  +   ++  +    +
Sbjct: 288 MMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISK 347

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCV-------LIDGLCKSGLVREAIDYFGRMPDFGLHP 113
             EA + LDEM+   I    +T+ +       ++ GLC +   R A   +  M   G+  
Sbjct: 348 FREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSR-AFTLYLSMRSRGISV 406

Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
            V    +L+  LCKK   ++A  L DE+     IP    +  LI   L      EA
Sbjct: 407 EVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEA 462


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 125/243 (51%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +++      +  +I GL        +  L  E   NG T +    T +++   K  +  E
Sbjct: 218 RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQE 277

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A++L++++  +    T+ T+  L++GLCK G + EAID   ++ D G  P+V  YT+LID
Sbjct: 278 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 337

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL K+     A  LF EM  R +  DT  YTALI G L+     +A ++   MT  G   
Sbjct: 338 GLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVP 397

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+   ++++ GLS+ G +  A  +F  M  RG+ P+E++  +L+    +   MD A+E+ 
Sbjct: 398 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 457

Query: 244 NEM 246
            +M
Sbjct: 458 AQM 460



 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 111/237 (46%)

Query: 10  LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
           +  Y  ++ GLC   + E++  LL ++ +NG T + V  T+L+D   K     EA  L  
Sbjct: 294 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 353

Query: 70  EMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
           EM    + +  V +  LI GL ++G + +A   +  M   G  P+V   + +IDGL K  
Sbjct: 354 EMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 413

Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
            I  A  +F  M  R + P+   Y+ALI G  K      AL +  +M +     D   Y 
Sbjct: 414 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 473

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            L+ GL + G ++ AR  F EM+  G  PD      L+    + GN D A  + ++M
Sbjct: 474 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM 530



 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 120/274 (43%), Gaps = 33/274 (12%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I GL  E +  ++  L  EM   GL  +TV  T L+    + G+  +A S+ 
Sbjct: 328 DVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVY 387

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M        VVT   +IDGL K+G +  A+  F  M   GL PN  VY+ALI GLCK 
Sbjct: 388 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 447

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA- 187
             ++ A  +  +M K    PDT  Y  LIDG  K    + A    + M E G   D+   
Sbjct: 448 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 507

Query: 188 -----------------------------YTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
                                        Y+SLV GL + G L+   +LFHEM   G+  
Sbjct: 508 NILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVAN 567

Query: 219 DEILCISLLKKHYERGN-MDEAIELQNEMMGRGL 251
            +    + L  H  + N +DEA+ L N +   G+
Sbjct: 568 SQTR--TRLIFHLCKANRVDEAVSLFNAIRKEGM 599



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 8/252 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  +  +Y  +I GLC   K + +  +L++MK+   T +T+    L+D   K+G+
Sbjct: 425 MEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGD 484

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +  DEML++  +  V T+ +LI GLCK+G    A      M          VY++
Sbjct: 485 VEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSS 539

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGLCK   +E    LF EM +R  + ++   T LI    K     EA++L N + + G
Sbjct: 540 LVDGLCKSGKLEGGCMLFHEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 598

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +     AY S++  L + G + E + ++ EM  R   PD +   +LL        MD A 
Sbjct: 599 MPHPY-AYNSIISALIKSGKVNEGQAVYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAH 656

Query: 241 ELQNEMMGRGLL 252
               EM GRG +
Sbjct: 657 YYYLEMTGRGYV 668



 Score =  103 bits (256), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 9/250 (3%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLS----EMKENGLTANTVICTTLMDAYFKAGEP 61
           +   L  +  ++ GLC     +  K+L +    E     +  +    + L++   KAG  
Sbjct: 186 VAPSLKTHNLVLHGLC-----KSGKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMM 240

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            +A SL  E   +   + + T+  +++ L K+  ++EA+    ++   G  P +A Y AL
Sbjct: 241 IQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNAL 300

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ++GLCK   +E A +L  ++      PD   YT+LIDG  K +   EA  L   M   G+
Sbjct: 301 LNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGL 360

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            LD   YT+L+ GL + G + +A  ++  M   G +PD +   +++    + G +  A+ 
Sbjct: 361 ALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVR 420

Query: 242 LQNEMMGRGL 251
           +   M  RGL
Sbjct: 421 IFKSMEARGL 430



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 2/202 (0%)

Query: 51  LMDAYFKAGEPSEALSLLDEML-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
           L+  Y  A EP EA +++ EM  D  +  ++ T  +++ GLCKSG V  A+D+F  +   
Sbjct: 160 LITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR- 218

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
            +  + A ++ LI+GL K   + +A +L  E        D   YTA+++   K++  +EA
Sbjct: 219 SMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEA 278

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           + L  ++T  G    +  Y +L+ GL + G L+EA  L  +++  G  PD +   SL+  
Sbjct: 279 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 338

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             +     EA +L  EM  RGL
Sbjct: 339 LGKEKRSFEAYKLFKEMASRGL 360



 Score = 77.8 bits (190), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 2/202 (0%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PD 108
            L+D + +     EA +LL   L +     V T+ VLI G C +    EA      M  D
Sbjct: 124 ALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEED 183

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
           FG+ P++  +  ++ GLCK   +  A + F E  +R M      ++ LI+G +K     +
Sbjct: 184 FGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRRSMPVSAATFSILINGLVKAGMMIQ 242

Query: 169 ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
           A +L    T  G  +D++ YT++V  L++   +QEA  L  ++   G  P      +LL 
Sbjct: 243 AHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLN 302

Query: 229 KHYERGNMDEAIELQNEMMGRG 250
              + G ++EAI+L  +++  G
Sbjct: 303 GLCKMGRLEEAIDLLRKIVDNG 324



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 3/151 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y +++ GLC   K E   +L  EM+ +G+ AN+   T L+    KA    EA+SL + +
Sbjct: 536 VYSSLVDGLCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAI 594

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
               +      +  +I  L KSG V E    +  M  +   P+   Y AL++G+   N +
Sbjct: 595 RKEGMP-HPYAYNSIISALIKSGKVNEGQAVYQEMTRW-WKPDRVTYNALLNGMIGANRM 652

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +RA   + EM  R  +P  +    L D  LK
Sbjct: 653 DRAHYYYLEMTGRGYVPPVSILHKLADDRLK 683


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 114/220 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L+++ + G   +    TTL+      G+  EAL L D+M+D   +  VVT+  LI+GLC
Sbjct: 102 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 161

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G    AI     M      P+V +YT++ID LCK   +  A NLF +M  + + PD  
Sbjct: 162 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 221

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT+L+        +K    L N+M    +  D+  ++++V  L + G + EA  +   M
Sbjct: 222 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 281

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I RG+ PD +   +L+  H  +  MDEA+++ + M+ +G 
Sbjct: 282 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 321



 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 107/220 (48%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L ++M   G+  N      L++++        A S+L ++L    +    TF  LI GLC
Sbjct: 67  LSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLC 126

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
             G + EA+  F +M D G  PNV  Y  LI+GLCK      A  L   M + +  PD  
Sbjct: 127 VEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVV 186

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT++ID   K     EA NL ++M   G+  D+  YTSLV  L      +    L ++M
Sbjct: 187 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 246

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +   ILPD ++  +++    + G + EA E+ + M+ RG+
Sbjct: 247 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 286



 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 117/243 (48%), Gaps = 4/243 (1%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T+I GLC+E K  ++  L  +M + G   N V   TL++   K G  S A+ 
Sbjct: 112 QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIR 171

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL  M     +  VV +  +ID LCK   V EA + F +M   G+ P++  YT+L+  LC
Sbjct: 172 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 231

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
                +    L ++M    ++PD   ++ ++D   K     EA  + + M + GV+ D+ 
Sbjct: 232 NLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV 291

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG----NMDEAIEL 242
            YT+L+ G      + EA  +F  M+ +G  PD I   +L+    + G    ++ E I L
Sbjct: 292 TYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGL 351

Query: 243 QNE 245
             E
Sbjct: 352 VKE 354



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 9/255 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N + D+ +Y +II  LC + +  ++  L S+M   G++ +    T+L+ A     E
Sbjct: 176 MEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCE 235

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
                +LL++M++S+I   VV F  ++D LCK G V EA +    M   G+ P+V  YT 
Sbjct: 236 WKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 295

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH----ESFKEALNLKNRM 176
           L+DG C ++ ++ A  +FD M ++   PD  +YT LI+   K      S +E + L    
Sbjct: 296 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKET 355

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
            +      +      V    +    ++ R L +EM+   I+P+ ++  +++    + G +
Sbjct: 356 PDA-----VKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKV 410

Query: 237 DEAIELQNEMMGRGL 251
            EA ++ + M+ RG+
Sbjct: 411 MEAHDVVDMMIKRGV 425



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L+ +  K    S  LSL  +M    +   V T  +LI+  C    V  A     ++   G
Sbjct: 51  LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 110

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             P+   +T LI GLC +  I  A +LFD+M      P+   Y  LI+G  K  +   A+
Sbjct: 111 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 170

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L   M +     D+  YTS++  L +   + EA  LF +M+G+GI PD     SL+   
Sbjct: 171 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 230

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
                      L N+M+   +L
Sbjct: 231 CNLCEWKHVTTLLNQMVNSKIL 252



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 88/189 (46%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +ALS  + +L      ++V F  L+  + K       +    +M  FG+ PNV     LI
Sbjct: 28  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 87

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C  N +  A ++  ++ K    PD T +T LI G        EAL+L ++M + G  
Sbjct: 88  NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQ 147

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ GL + G+   A  L   M      PD ++  S++    +   + EA  L
Sbjct: 148 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 207

Query: 243 QNEMMGRGL 251
            ++M+G+G+
Sbjct: 208 FSQMVGQGI 216



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 34/183 (18%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I  D+ ++ T++  LC E K  ++  ++  M + G+  + V  TTLMD +    E
Sbjct: 246 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG-----------LVREAIDYF------ 103
             EA+ + D M+       V+++  LI+   K G           LV+E  D        
Sbjct: 306 MDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVE 365

Query: 104 ------------GR-----MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
                       GR     M +  + PNV +++ ++D LCK+  +  A ++ D M KR +
Sbjct: 366 VIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 425

Query: 147 IPD 149
            P+
Sbjct: 426 EPN 428


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 119/242 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG +I GLC +  F+    LL EMKE G+  N  +  +++DA  K G   E    L  + 
Sbjct: 278 YGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWIT 337

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++  E  + T+  LI G C+ G V EA +        GL PN   YT LI   CK+    
Sbjct: 338 ENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCL 397

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA +LF  M ++    D  AY AL+ G +       AL ++++M E GV  D N Y  L+
Sbjct: 398 RAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLM 457

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL + G L  A++L  EM+ + +  D  +  +L+      G +DEA +L    + +G+ 
Sbjct: 458 NGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMD 517

Query: 253 SG 254
            G
Sbjct: 518 PG 519



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 109/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D  +Y  ++ GLC + +   +KLLL EM    L+ +  +  TL+D + + G+
Sbjct: 441 MVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGK 500

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L +  +   ++  VV +  +I G CK G++ +A+    RM D    P+   Y+ 
Sbjct: 501 LDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYST 560

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG  K+N +  A  LF +M K+   P+   YT+LI+G+ +      A      M   G
Sbjct: 561 IIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSG 620

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT L+    + G + +A   F  M+    +P+++
Sbjct: 621 LKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDV 661



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 103/239 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    DL  YG ++ GL    + + +  +  +M E G+  +  +   LM+   K G 
Sbjct: 406 MTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGR 465

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  LL EML   + +       L+DG  + G + EA   F      G+ P V  Y A
Sbjct: 466 LSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNA 525

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G CK   +  A      M   D  PD   Y+ +IDGY+K      AL L  +M +  
Sbjct: 526 MIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQK 585

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
              ++  YTSL+ G  R G    A   F EM   G+ P+ +    L+    + G + +A
Sbjct: 586 CKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKA 644



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 119/271 (43%), Gaps = 35/271 (12%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++ GLC E K E+ + L+++    G   N V   TL+D Y+K G+   A  L  E+    
Sbjct: 211 MVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKG 270

Query: 76  IEVTVVTFCVLIDGLCKS-------GLVREA--------IDYFGRMPDF----------- 109
              T  T+ ++I+GLCK        GL+ E         +  +  + D            
Sbjct: 271 FLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVG 330

Query: 110 ---------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
                    G  P++  Y  LI G C+   +  A  L +   KR + P+  +YT LI  Y
Sbjct: 331 KTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVY 390

Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
            K      A +L   MTE G  LDL AY +LV GL   G +  A  +  +M+ RG+LPD 
Sbjct: 391 CKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDA 450

Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +   L+    ++G +  A  L  EM+ + L
Sbjct: 451 NVYNVLMNGLCKKGRLSAAKLLLVEMLHQNL 481



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 116/239 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G C + K  +++ LL    + GL+ N +  T L+  Y K G+   A  L 
Sbjct: 344 DITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLF 403

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M +    + +V +  L+ GL  +G V  A+    +M + G+ P+  VY  L++GLCKK
Sbjct: 404 IGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKK 463

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A+ L  EM  +++  D      L+DG+++H    EA  L       G+D  +  Y
Sbjct: 464 GRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGY 523

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
            +++ G  + G + +A      M      PDE    +++  + ++ ++  A++L  +M+
Sbjct: 524 NAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMV 582



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 14/223 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I G C      D+   +  MK+   + +    +T++D Y K  +   AL L  +M+
Sbjct: 523 YNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMV 582

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
             + +  VVT+  LI+G C++G    A   F  M   GL PNV  YT LI   CK+  I 
Sbjct: 583 KQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKIS 642

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKH------ESFKEALNLK--------NRMTE 178
           +A + F+ M     IP+   +  LI+G   +          E+L +K          M  
Sbjct: 643 KACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMIS 702

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
            G +  + AY S++  L     +  A  L  +M G+GI PD +
Sbjct: 703 DGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPV 745



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 108/247 (43%), Gaps = 2/247 (0%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPSE 63
           N   D+     ++  L  + K E ++ +  EM K +G   N  +C  ++    K  +  E
Sbjct: 165 NYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCI-MVRGLCKERKVEE 223

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
              L+++         +V +  L+DG  K G V  A   F  +   G  P    Y  +I+
Sbjct: 224 GRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMIN 283

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLCKK   +    L  EM +R +  +   Y +++D  +KH    E       +TE G + 
Sbjct: 284 GLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEP 343

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+  Y +L+ G  R G + EA  L    I RG+ P+++    L+  + ++G    A +L 
Sbjct: 344 DITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLF 403

Query: 244 NEMMGRG 250
             M  +G
Sbjct: 404 IGMTEKG 410



 Score = 69.3 bits (168), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 16/227 (7%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K ++  Y ++I G C       ++    EM+ +GL  N V  T L+  + K G+
Sbjct: 581 MVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGK 640

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK------SGLVREAI--------DYFGRM 106
            S+A S  + ML +R     VTF  LI+GL        S    E++        D+F  M
Sbjct: 641 ISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTM 700

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G    VA Y +++  LC    +  A  L D+M  + + PD  ++ AL+ G       
Sbjct: 701 ISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRS 760

Query: 167 KEALN-LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           KE  N +  ++ E  + + +     L   L + G   EA  +FH ++
Sbjct: 761 KEWKNTISCKLNEWELQIAVKYSQKLNPFLPK-GLTSEASKVFHTLL 806



 Score = 42.7 bits (99), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 56/109 (51%)

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
            + +PD  A  AL++  ++ +  + A  +   M +     D  +   +V GL +   ++E
Sbjct: 164 HNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEE 223

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            R L ++  G+G +P+ +   +L+  +++RG+++ A  L  E+  +G L
Sbjct: 224 GRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFL 272


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 129/281 (45%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D   Y T+I GLC   +  ++  +L EM       + V  T L++A  K     +A+
Sbjct: 154 VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 213

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG- 124
            LLDEM D      +VT+ V+++G+C+ G V +AI++   +P +G  PN   Y  ++ G 
Sbjct: 214 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 273

Query: 125 ----------------------------------LCKKNCIERARNLFDEMPKRDMIPDT 150
                                             LC+K  +E A  + +++PK    P++
Sbjct: 274 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 333

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            +Y  L+  + K +   +A+   + M   G   D+ +Y +L+  L R G +  A  L H+
Sbjct: 334 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 393

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  +G  P  I   +++    + G   EA+EL NEM+ +GL
Sbjct: 394 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGL 434



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 107/221 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    D+  Y  ++ G+C E + +D+   L  +   G   NTV    ++     A  
Sbjct: 219 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 278

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EM        VVTF +LI  LC+ GLV  A++   ++P +G  PN   Y  
Sbjct: 279 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 338

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   CK+  +++A    D M  R   PD  +Y  L+    +      A+ L +++ + G
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
               L +Y +++ GL++ G  +EA  L +EM+ +G+ PD I
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDII 439



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 96/181 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y T++  LC   + + +  LL ++K+ G     +   T++D   KAG+
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL+EM+   ++  ++T+  +  GLC+   + +AI  FG++ D G+ PN  +Y A
Sbjct: 419 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 478

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I GLCK+     A +LF  M     +P+ + YT LI+G       KEA +L + +   G
Sbjct: 479 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538

Query: 181 V 181
           V
Sbjct: 539 V 539



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 126/255 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  +  +I  LC +   E +  +L ++ + G T N++    L+ A+ K  +
Sbjct: 289 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 348

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++ LD M+       +V++  L+  LC+SG V  A++   ++ D G  P +  Y  
Sbjct: 349 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 408

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGL K    + A  L +EM  + + PD   Y+ +  G  + +  ++A+    ++ ++G
Sbjct: 409 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 468

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +++ GL +      A  LF  MIG G +P+E     L++     G + EA 
Sbjct: 469 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 528

Query: 241 ELQNEMMGRGLLSGS 255
           +L +E+  RG++  S
Sbjct: 529 DLLDELCSRGVVRKS 543



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 106/210 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++   C + K + +   L  M   G   + V   TL+ A  ++GE   A+ LL ++ 
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           D      ++++  +IDGL K+G  +EA++    M   GL P++  Y+ +  GLC+++ IE
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F ++    + P+T  Y A+I G  K      A++L   M   G   + + YT L+
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
            GL+  G ++EAR L  E+  RG++   ++
Sbjct: 516 EGLAYEGLIKEARDLLDELCSRGVVRKSLI 545



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC   ++ED++ L+ EM + G   N V    L+    + G    AL +L+++ 
Sbjct: 266 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 325

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   +++  L+   CK   + +A+ +   M   G +P++  Y  L+  LC+   ++
Sbjct: 326 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 385

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  ++  +   P   +Y  +IDG  K    KEAL L N M   G+  D+  Y+++ 
Sbjct: 386 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 445

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL R   +++A   F ++   GI P+ +L  +++    +R     AI+L   M+G G +
Sbjct: 446 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 505



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/253 (22%), Positives = 106/253 (41%), Gaps = 8/253 (3%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G   + D      +I  L    +  +++ +L+    + +  N ++       Y  AG+  
Sbjct: 89  GSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMVA-----GYCGAGQLD 143

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A  L+ EM    +E    T+  LI GLC  G    A+     M      P+V  YT L+
Sbjct: 144 AARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILL 200

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  CK++  ++A  L DEM  +   PD   Y  +++G  +     +A+     +   G +
Sbjct: 201 EATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCE 260

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            +  +Y  ++ GL      ++A  L  EM  +G  P+ +    L+     +G ++ A+E+
Sbjct: 261 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 320

Query: 243 QNEMMGRGLLSGS 255
             ++   G    S
Sbjct: 321 LEQIPKYGCTPNS 333



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 41/231 (17%)

Query: 52  MDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGL 111
           + +  + GE  EAL L+     S       T   LI  L  SG   EA     R      
Sbjct: 72  LRSLVRRGELDEALRLVG----SARRPDAGTCAALIKKLSASGRTAEA-----RRVLAAC 122

Query: 112 HPNVAVYTALIDGLCKKNCIERARNLFDEMP----------------------------- 142
            P+V  Y A++ G C    ++ AR L  EMP                             
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLD 182

Query: 143 ---KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
              +R  +PD   YT L++   K   +K+A+ L + M + G   D+  Y  +V G+ + G
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            + +A      +   G  P+ +    +LK        ++A EL  EM  +G
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 293


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 119/238 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I  LC   K +D+  L  +MK +    + V   T++D +   G+        
Sbjct: 298 DVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFW 357

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM        V+TF +L++ LCK+G + EA      M   G+ PN+  Y  LI GL + 
Sbjct: 358 SEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRV 417

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N ++ A +LF+ M    ++P    Y   ID Y K     +AL    +M   G+  ++ A 
Sbjct: 418 NRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVAC 477

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            + ++ L+  G L+EA+V+F+ +   G+ PD +    ++K + + G +DEAIEL ++M
Sbjct: 478 NASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDM 535



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 127/249 (51%), Gaps = 1/249 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  ++      ++ L    +  ++K++ + +K NGL  ++V    +M  Y KAG+
Sbjct: 465 MKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQ 524

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ LL +M +++ E  ++    LI+ L K+G V EA   F R+ D  L P V  Y  
Sbjct: 525 VDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNT 584

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL K+  ++RA  LF  M      P+T  +  ++D   K++    AL +  +MT + 
Sbjct: 585 LIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMN 644

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  + +++ GL     + +A  LFH+M  + + PD +   +LL    + G M++A 
Sbjct: 645 CMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAF 703

Query: 241 ELQNEMMGR 249
           ++  + + R
Sbjct: 704 KIAEDFVHR 712



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 115/246 (46%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            +K  L  Y  +I G       E +  L +EMK  G   +      L+DA+ K+G+ +E  
Sbjct: 786  VKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELF 845

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             L ++M+ S  +   +T  ++I  L KS  + +A+D F  +      P    Y  L+DGL
Sbjct: 846  ELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGL 905

Query: 126  CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
             K   +E A+ LF+EM      P+   Y  LI+G+ K      A  L  RM   G+  DL
Sbjct: 906  LKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDL 965

Query: 186  NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +YTSLV  L   G + +A   F ++   G+  D I    ++        ++EA+ L +E
Sbjct: 966  KSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDE 1025

Query: 246  MMGRGL 251
            M  RG+
Sbjct: 1026 MQSRGI 1031



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 5/222 (2%)

Query: 30   KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDG 89
            +++ S  K N +T N +I   +     K+    +AL L  +++      T  T+  L+DG
Sbjct: 850  QMICSSCKPNTITHNIIIANLV-----KSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDG 904

Query: 90   LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
            L KSG + EA + F  M D+G  PN A+Y  LI+G  K   +  A  LF  M +  + PD
Sbjct: 905  LLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPD 964

Query: 150  TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
              +YT+L+    +     +AL+   ++ + G+ LD  AY  ++ GL R   ++EA  L+ 
Sbjct: 965  LKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYD 1024

Query: 210  EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            EM  RGI PD     SL+      G +++A +L  E+   GL
Sbjct: 1025 EMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGL 1066



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 117/244 (47%)

Query: 7    KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
            K +   +  II  L   +  + +  L  ++     +        L+D   K+G   EA  
Sbjct: 857  KPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKE 916

Query: 67   LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
            L +EM+D         + +LI+G  K+G V  A + F RM   G+ P++  YT+L+  LC
Sbjct: 917  LFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLC 976

Query: 127  KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
            +   ++ A + F+++ +  +  D+ AY  +IDG  +    +EAL L + M   G++ DL 
Sbjct: 977  EAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLF 1036

Query: 187  AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
             Y SL+  L   G +++A  L+ E+   G+ P+     +L++ +   GN D A  +   M
Sbjct: 1037 TYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRM 1096

Query: 247  MGRG 250
            M  G
Sbjct: 1097 MVGG 1100



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 113/246 (45%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K  L  +  ++         E  K LL EM+  GL  N    T  +    +AG   EA 
Sbjct: 225 LKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEAC 284

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            ++  M D      VVT+ VLID LC +G + +A++ F +M      P+   Y  ++D  
Sbjct: 285 RIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKF 344

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
                + R +  + EM      PD   +T L++   K  +  EA +L + M + GV  +L
Sbjct: 345 SDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNL 404

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
           + Y +L+ GL R   L +A  LF+ M   G++P     I  +  + + G  D+A+E   +
Sbjct: 405 HTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEK 464

Query: 246 MMGRGL 251
           M  RG+
Sbjct: 465 MKIRGI 470



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 104/207 (50%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            YG ++ GL    + E++K L  EM + G   N  I   L++ + K G+ + A  L   M+
Sbjct: 898  YGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMV 957

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               I   + ++  L+  LC++G V +A+ YF ++   GL+ +   Y  +IDGL + + IE
Sbjct: 958  REGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIE 1017

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
             A  L+DEM  R + PD   Y +LI         ++A  L   +  +G++ ++  Y +L+
Sbjct: 1018 EALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALI 1077

Query: 193  WGLSRCGHLQEARVLFHEMIGRGILPD 219
             G S  G+   A  ++  M+  G  P+
Sbjct: 1078 RGYSMSGNSDSAYAVYKRMMVGGCSPN 1104



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 111/248 (44%), Gaps = 12/248 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS------KLLLSEMKENGLTANTVICTTLMDA 54
           MK  + K D   Y T++       KF D       K   SEM+ +G   + +  T L++A
Sbjct: 325 MKASSHKPDRVTYITML------DKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNA 378

Query: 55  YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
             KAG   EA  LLD M    +   + T+  LI GL +   + +A+D F  M   G+ P 
Sbjct: 379 LCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPT 438

Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
              Y   ID   K    ++A   F++M  R + P+  A  A +    +    +EA  + N
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFN 498

Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
           R+   G+  D   Y  ++   S+ G + EA  L  +M      PD I+  SL+   Y+ G
Sbjct: 499 RLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAG 558

Query: 235 NMDEAIEL 242
            +DEA ++
Sbjct: 559 RVDEAWKM 566



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 101/252 (40%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + IK DL  Y  I  GL I      +     +M+E G   N      L+    ++G 
Sbjct: 150 MQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGL 209

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL +   M+   ++ ++ TF  L+    K             M   GL PN+  YT 
Sbjct: 210 CREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTI 269

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I  L +   I+ A  +   M      PD   YT LID         +A+ L  +M    
Sbjct: 270 CIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASS 329

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +++   S CG L   +  + EM   G  PD I    L+    + GN+DEA 
Sbjct: 330 HKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAF 389

Query: 241 ELQNEMMGRGLL 252
            L + M  +G+L
Sbjct: 390 HLLDVMRKQGVL 401



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 111/250 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      D+  +  ++  LC     +++  LL  M++ G+  N     TL+    +   
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNR 419

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL L + M    +  T  T+ + ID   KSG   +A++ F +M   G+ PN+    A
Sbjct: 420 LDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNA 479

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +  L +   +  A+ +F+ +    + PD+  Y  ++  Y K     EA+ L + M+E  
Sbjct: 480 SLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQ 539

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+    SL+  L + G + EA  +F  +    + P  +   +L+    + G +  A+
Sbjct: 540 CEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAM 599

Query: 241 ELQNEMMGRG 250
           EL   M G G
Sbjct: 600 ELFASMTGNG 609



 Score = 85.1 bits (209), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 111/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  +L  Y T+I GL   ++ +D+  L + M+  G+          +D Y K+G 
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGR 454

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL   ++M    I   +V     +  L + G +REA   F R+   GL P+   Y  
Sbjct: 455 SDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNM 514

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    K   ++ A  L  +M +    PD     +LI+   K     EA  +  R+ ++ 
Sbjct: 515 MMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMK 574

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +L+ GL + G +Q A  LF  M G G  P+ I   ++L    +   +D A+
Sbjct: 575 LAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLAL 634

Query: 241 ELQNEM 246
           ++  +M
Sbjct: 635 KMLYKM 640



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  + I+ DL  Y +++  LC   + +D+     ++K+ GL  +++    ++D   ++  
Sbjct: 956  MVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHR 1015

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EAL+L DEM    I   + T+  LI  L  +G+V +A   +  +   GL PNV  Y A
Sbjct: 1016 IEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNA 1075

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
            LI G       + A  ++  M      P+T  +  L
Sbjct: 1076 LIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 122/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K I  D+  + ++I GLC+ S  + +  L  EMK  G   +      L+D+   + +
Sbjct: 404 LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRK 463

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL+LL EM  +     VV +  LIDG CK+  + EA + F  M   G+  +   Y  
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNT 523

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  L D+M    + PD   Y +L+  + K    K+A ++   MT  G
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG 583

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+  Y +L+ GL + G +Q A  L   +  +G++        +++  ++R    EA+
Sbjct: 584 CNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAM 643

Query: 241 ELQNEMMGRG 250
            L  EM+ + 
Sbjct: 644 RLFREMLDKS 653



 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 123/281 (43%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I+ D+  +  +I  LC   +   + L++ EM   GL+ +    TT+M  Y + G 
Sbjct: 194 MVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGN 253

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF------GRMPDF----- 109
              AL + ++M++     T VT  VLI+G CK G + +A+ +       G  PD      
Sbjct: 254 LDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNT 313

Query: 110 ------------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                                   GL P++  Y +LI GLCK   IE A  + D+M  RD
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+   Y A+I    K     EA  +   +T  G+  D+  + SL+ GL    + + A 
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            LF EM G+G  PDE     L+        ++EA+ L  EM
Sbjct: 434 DLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 116/251 (46%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKGK  + D   Y  +I  LC   K E++  LL EM+ NG   N VI  TL+D + K   
Sbjct: 439 MKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKR 498

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + DEM    +    VT+  LIDGLCKS  V +A     +M   GL P+   Y +
Sbjct: 499 IEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNS 558

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   CK   I++A ++   M      PD   Y  LI G  K    + A  L   +   G
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEA 239
           + L  +AY  ++  L +     EA  LF EM+ +   PD I    + +     G  + EA
Sbjct: 619 MVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEA 678

Query: 240 IELQNEMMGRG 250
           ++   EM+ RG
Sbjct: 679 VDFTVEMIERG 689



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 113/245 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y ++I GLC   + E++  +L +M     + N V    ++ +  K     EA 
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT 398

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +   +    I   V TF  LI GLC S   + A+D F  M   G  P+   Y  LID L
Sbjct: 399 EIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C    +E A NL  EM       +   Y  LIDG+ K++  +EA  + + M   GV  D 
Sbjct: 459 CSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDS 518

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +L+ GL +   +++A  L  +MI  G+ PD+    SLL    + G++ +A ++   
Sbjct: 519 VTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQT 578

Query: 246 MMGRG 250
           M   G
Sbjct: 579 MTSSG 583



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 119/249 (47%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            +  + D   Y T++ GLC     + +  ++  M   GL  +     +L+    K GE  
Sbjct: 301 SEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIE 360

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           EA+ +LD+M+        VT+  +I  LCK   V EA +    +   G+ P+V  + +LI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLI 420

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            GLC  +  + A +LF+EM  +   PD   Y  LID        +EALNL   M   G  
Sbjct: 421 QGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCA 480

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y +L+ G  +   ++EA  +F EM  +G+  D +   +L+    +   +++A +L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQL 540

Query: 243 QNEMMGRGL 251
            ++M+  GL
Sbjct: 541 MDQMIMEGL 549



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 114/252 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  ++   +   Y  II  LC E++ +++  +   +   G+  +     +L+     +  
Sbjct: 369 MVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSN 428

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ L +EM          T+ +LID LC S  + EA++    M   G   NV +Y  
Sbjct: 429 HKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNT 488

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK   IE A  +FDEM  + +  D+  Y  LIDG  K +  ++A  L ++M   G
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG 548

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y SL+    + G +++A  +   M   G  PD +   +L+    + G +  A 
Sbjct: 549 LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVAS 608

Query: 241 ELQNEMMGRGLL 252
            L   +  +G++
Sbjct: 609 RLLRSIQMKGMV 620



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 35/250 (14%)

Query: 38  ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           E  +  +T     L++    A +     S    M+  RI   V TF +LI  LCK+  VR
Sbjct: 161 EYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVR 220

Query: 98  EAIDYFGRMPDFGLHPNVAVYTA-----------------------------------LI 122
            AI     MP +GL P+   +T                                    LI
Sbjct: 221 PAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLI 280

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +G CK+  I++A +   E       PD   Y  L++G  K    K A+ + + M   G+D
Sbjct: 281 NGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLD 340

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y SL+ GL + G ++EA  +  +M+ R   P+ +   +++    +   +DEA E+
Sbjct: 341 PDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEI 400

Query: 243 QNEMMGRGLL 252
              +  +G+L
Sbjct: 401 ARLLTSKGIL 410



 Score = 65.9 bits (159), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 3/172 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M       D+  Y T+I GLC   + + +  LL  ++  G+         ++ A FK   
Sbjct: 579 MTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNR 638

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG-LVREAIDYFGRMPDFGLHPNVAVYT 119
             EA+ L  EMLD       +T+ ++  GLC  G  + EA+D+   M + G  P  + + 
Sbjct: 639 THEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFV 698

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN 171
            L +GLC  +  +    L D + ++    +    T  I G+LK   F++AL+
Sbjct: 699 MLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREIST--IRGFLKIRKFQDALS 748



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/216 (19%), Positives = 88/216 (40%), Gaps = 1/216 (0%)

Query: 37  KENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV 96
           K+     ++ +   ++    KAG       +L+EM  S  E     F + ++   K  L 
Sbjct: 89  KQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELY 148

Query: 97  REAIDYFGRMPD-FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
            E +     M D + + P+   Y  L++ L   N ++   +    M +R +  D + +  
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           LI    K    + A+ +   M   G+  D   +T+++ G    G+L  A  +  +M+  G
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268

Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               ++    L+    ++G +D+A+    E +  G 
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGF 304


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 129/281 (45%), Gaps = 35/281 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D   Y T+I GLC   +  ++  +L EM       + V  T L++A  K     +A+
Sbjct: 28  VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 87

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG- 124
            LLDEM D      +VT+ V+++G+C+ G V +AI++   +P +G  PN   Y  ++ G 
Sbjct: 88  KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 147

Query: 125 ----------------------------------LCKKNCIERARNLFDEMPKRDMIPDT 150
                                             LC+K  +E A  + +++PK    P++
Sbjct: 148 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 207

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
            +Y  L+  + K +   +A+   + M   G   D+ +Y +L+  L R G +  A  L H+
Sbjct: 208 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 267

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  +G  P  I   +++    + G   EA+EL NEM+ +GL
Sbjct: 268 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGL 308



 Score =  110 bits (276), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 107/221 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K    D+  Y  ++ G+C E + +D+   L  +   G   NTV    ++     A  
Sbjct: 93  MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 152

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ EM        VVTF +LI  LC+ GLV  A++   ++P +G  PN   Y  
Sbjct: 153 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 212

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   CK+  +++A    D M  R   PD  +Y  L+    +      A+ L +++ + G
Sbjct: 213 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 272

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
               L +Y +++ GL++ G  +EA  L +EM+ +G+ PD I
Sbjct: 273 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDII 313



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC   ++ED++ L+ EM + G   N V    L+    + G    AL +L+++ 
Sbjct: 140 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 199

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   +++  L+   CK   + +A+ +   M   G +P++  Y  L+  LC+   ++
Sbjct: 200 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 259

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L  ++  +   P   +Y  +IDG  K    KEAL L N M   G+  D+  Y+++ 
Sbjct: 260 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 319

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            GL R   +++A   F ++   GI P+ +L  +++    +R     AI+L   M+G G +
Sbjct: 320 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 379



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 92/172 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y T++  LC   + + +  LL ++K+ G     +   T++D   KAG+
Sbjct: 233 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 292

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL LL+EM+   ++  ++T+  +  GLC+   + +AI  FG++ D G+ PN  +Y A
Sbjct: 293 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 352

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           +I GLCK+     A +LF  M     +P+ + YT LI+G       KEA +L
Sbjct: 353 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDL 404



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 122/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  +  +I  LC +   E +  +L ++ + G T N++    L+ A+ K  +
Sbjct: 163 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 222

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A++ LD M+       +V++  L+  LC+SG V  A++   ++ D G  P +  Y  
Sbjct: 223 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 282

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGL K    + A  L +EM  + + PD   Y+ +  G  + +  ++A+    ++ ++G
Sbjct: 283 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 342

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +++ GL +      A  LF  MIG G +P+E     L++     G + EA 
Sbjct: 343 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 402

Query: 241 ELQNEMMGRG 250
           +L +E+  R 
Sbjct: 403 DLLDELCSRA 412



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 3/206 (1%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
            ++  Y  AG+   A  L+ EM    +E    T+  LI GLC  G    A+     M   
Sbjct: 5   AMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR 61

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
              P+V  YT L++  CK++  ++A  L DEM  +   PD   Y  +++G  +     +A
Sbjct: 62  RCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDA 121

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
           +     +   G + +  +Y  ++ GL      ++A  L  EM  +G  P+ +    L+  
Sbjct: 122 IEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 181

Query: 230 HYERGNMDEAIELQNEMMGRGLLSGS 255
              +G ++ A+E+  ++   G    S
Sbjct: 182 LCRKGLVEPALEVLEQIPKYGCTPNS 207



 Score = 50.8 bits (120), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 32/165 (19%)

Query: 118 YTALIDGLCKKNCIERARNLFDEMP--------------------------------KRD 145
           Y A++ G C    ++ AR L  EMP                                +R 
Sbjct: 3   YNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRR 62

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            +PD   YT L++   K   +K+A+ L + M + G   D+  Y  +V G+ + G + +A 
Sbjct: 63  CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAI 122

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
                +   G  P+ +    +LK        ++A EL  EM  +G
Sbjct: 123 EFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 167


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 1/244 (0%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I  ++  +  +I+G C+E+KF+D+   L+ M +   + + V   T++DA  K G   +A 
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDAR 263

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL +M    +     T+ +L+ G CK G ++EA +    M    L P+V  Y  LI+GL
Sbjct: 264 DLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGL 323

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C +  IE A  L DEM    ++PD  +Y  LI+G L+     EA  L   M+E GV  + 
Sbjct: 324 CNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNA 383

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +  +V    + G + +A     +M   G  PD +   +L+  + + GNM EA    +E
Sbjct: 384 VTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDE 443

Query: 246 MMGR 249
            MGR
Sbjct: 444 -MGR 446



 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  KN+K D     TI+  LC E K E++  LLS  ++ G   + V   TL+  YFK G 
Sbjct: 444 MGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGN 503

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L DEM +  I  + VT+  +I GLC+ G   +AI     + + GL P+   Y  
Sbjct: 504 VDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNT 563

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ G C++  +E+A    ++M +    PD      L+ G       ++AL L N     G
Sbjct: 564 ILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKG 623

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +D   Y +L+  L + G L +A  L  EM  + + PD     +++    + G + EA 
Sbjct: 624 KAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAE 683

Query: 241 ELQNEMMGRGLL 252
           E  ++M+ +G L
Sbjct: 684 EFMSKMLEKGXL 695



 Score =  110 bits (274), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 124/250 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +K +   +  ++   C E K +D+   +++M+E+G + + V   TL++ Y KAG 
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA   +DEM    +++  VT   ++  LC+   + EA          G   +   Y  
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGT 493

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G  K   ++RA  L+DEM ++++IP T  Y  +I G  +    ++A++  N + E G
Sbjct: 494 LIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESG 553

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +++ G  R G +++A    ++M+     PD   C  LL+     G +++A+
Sbjct: 554 LLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKAL 613

Query: 241 ELQNEMMGRG 250
           +L N  + +G
Sbjct: 614 KLFNTWVSKG 623



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 35/282 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N+  D+  Y  +I GLC E + E++  L  EM+   L  + V   TL++   +  +
Sbjct: 304 MTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSK 363

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  LL+EM +  ++   VT  +++   CK G + +A +   +M + G  P+   Y  
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNT 423

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDM---------------------------------- 146
           LI+G CK   +  A    DEM +++M                                  
Sbjct: 424 LINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRG 483

Query: 147 -IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
              D  +Y  LI GY K  +   AL L + M E  +      Y  ++ GL +CG  ++A 
Sbjct: 484 YFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
              +E++  G+LPDE    ++L  +   G++++A +  N+M+
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMV 585



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 117/250 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N   D   Y TI+  LC + +  D++ LL +MK  GL  N      L+  Y K G 
Sbjct: 234 MGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGW 293

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++++ M  + +   V T+ +LI+GLC  G + EA      M +  L P+V  Y  
Sbjct: 294 LKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNT 353

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G  + + I  A  L +EM ++ + P+   +  ++  Y K     +A N   +M E G
Sbjct: 354 LINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESG 413

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +L+ G  + G++ EA     EM  + +  D +   ++L+       ++EA 
Sbjct: 414 FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAY 473

Query: 241 ELQNEMMGRG 250
           +L +    RG
Sbjct: 474 KLLSSARKRG 483



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 111/224 (49%), Gaps = 5/224 (2%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV----TFCVLI 87
           +  +MK   L  N + C TL+++  +    S ++S   E  +  I++ +V    TF ++I
Sbjct: 157 IFKKMKRLRLRPNLLTCNTLLNSLVRY-PSSHSVSFSREAFNDAIKLGIVPNVNTFNIVI 215

Query: 88  DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI 147
            G C     ++A+++   M  +   P+   Y  ++D LCKK  +  AR+L  +M  R ++
Sbjct: 216 YGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLL 275

Query: 148 PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVL 207
           P+   Y  L+ GY K    KEA N+   MT+  +  D+  Y  L+ GL   G ++EA  L
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKL 335

Query: 208 FHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             EM    +LPD +   +L+    E   + EA +L  EM  +G+
Sbjct: 336 RDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 3/206 (1%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK---SGLVREAIDYFGRM 106
           T + AY ++G+P  A  +  +M   R+   ++T   L++ L +   S  V  + + F   
Sbjct: 140 TAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDA 199

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
              G+ PNV  +  +I G C +N  + A    + M K +  PD   Y  ++D   K    
Sbjct: 200 IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRL 259

Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
            +A +L   M   G+  + N Y  LV+G  + G L+EA  +   M    +LPD      L
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319

Query: 227 LKKHYERGNMDEAIELQNEMMGRGLL 252
           +      G ++EA +L++EM    LL
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLL 345



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 85/222 (38%), Gaps = 25/222 (11%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D   Y TI+ G C E   E +    ++M EN    +   C  L+      G   +AL L 
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLF 616

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +  +     +  VT+  LI  LCK G + +A +    M +  L P+   Y A+I  L   
Sbjct: 617 NTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDS 676

Query: 129 NCIERARNLFDEMPKRDMIPDT-----------------------TAYTALIDGYLKHES 165
             I  A     +M ++  +P                          AY+  I        
Sbjct: 677 GRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGK 736

Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGL--SRCGHLQEAR 205
           +K+A+ +     + G+ +D + Y +L+ GL   R    +EAR
Sbjct: 737 YKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 23/186 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   + K D+     ++ GLC+E   E +  L +     G   +TV   TL+ +  K G 
Sbjct: 584 MVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGR 643

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN------ 114
             +A +LL EM +  +     T+  +I  L  SG +REA ++  +M + G  P       
Sbjct: 644 LDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLD 703

Query: 115 -----------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
                               Y+  I  LC +   + A  +F E  ++ +  D + Y  L+
Sbjct: 704 XNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLM 763

Query: 158 DGYLKH 163
           DG +K 
Sbjct: 764 DGLIKR 769


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 121/237 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + I+ D+  Y T+I  +C   + E +  ++S M+   ++ N V  +T++D Y K G 
Sbjct: 331 MQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGC 390

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  +M +S +    V++  LID   K G   +A+     M   GL  +V  Y A
Sbjct: 391 FEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNA 450

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K+   + A  LFD+M    ++P+   Y+ALID Y K    ++A ++       G
Sbjct: 451 LIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAG 510

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           +  D+  Y+SL+    +CG +++A VL  EM   GI P+ +   SL+  +   G +D
Sbjct: 511 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVD 567



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + ++ D   + ++I      S +EDS+ + +EM+  G+  +     TL+DA  K G+
Sbjct: 296 MQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQ 355

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A S++  M    I   VVT+  +IDG  K G   EAI  +  M + G+ P+   Y  
Sbjct: 356 MELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNT 415

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID   K    + A     +M +  +  D   Y ALID Y K   +K+A  L ++M   G
Sbjct: 416 LIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEG 475

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  Y++L+   S+ G  Q+A  +F E    G+ PD +L  SL+    + G +++A+
Sbjct: 476 LVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAV 535

Query: 241 ELQNEMMGRGL 251
            L  EM   G+
Sbjct: 536 VLLQEMTQAGI 546



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 4/240 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLL--LSEMKENGLTANTVICTTLMDAYFKA 58
           MK    K +L  Y TII   C +   +  K L    EM++ G+  + +   +L+    + 
Sbjct: 260 MKKAGCKPNLITYNTII-DACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRG 318

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
               ++  +  EM    IE  + T+  LID +CK G +  A      M    + PNV  Y
Sbjct: 319 SLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTY 378

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
           + +IDG  K  C E A  L+ +M +  + PD  +Y  LID Y K   F +AL     M  
Sbjct: 379 STMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMER 438

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
           VG+  D+  Y +L+    + G  ++A  LF +M   G++P+ +L  S L   Y +  M +
Sbjct: 439 VGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPN-VLTYSALIDAYSKAGMHQ 497



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 9/219 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +KAD+  Y  +I     + K++D+  L  +MK  GL  N +  + L+DAY KAG 
Sbjct: 436 MERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGM 495

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A S+  E   + ++  VV +  LID  CK GLV +A+     M   G+ PN+  Y +
Sbjct: 496 HQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNS 555

Query: 121 LIDGLCKK---NCIERAR-----NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           LID   +    + +E A+     N+F+++  R         T+  +    H     A+++
Sbjct: 556 LIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNAN-DHTGVLAAVSV 614

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            + M + G+  ++  +++++   SRC  LQEA VL  +M
Sbjct: 615 FHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQM 653



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 1/222 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAG-EPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
           +   MK+ G   N +   T++DA  K G +  +AL + +EM    +E   +TF  LI   
Sbjct: 256 VFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVC 315

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
            +  L  ++   F  M   G+  ++  Y  LID +CK   +E A ++   M  +++ P+ 
Sbjct: 316 SRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNV 375

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y+ +IDGY K   F+EA+ L + M E GV  D  +Y +L+   ++ G   +A     +
Sbjct: 376 VTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKD 435

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           M   G+  D +   +L+  + ++G   +A  L ++M   GL+
Sbjct: 436 MERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLV 477



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 109/221 (49%), Gaps = 1/221 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           + +  ++ G   N    + ++ AY ++G   EAL +   M  +  +  ++T+  +ID   
Sbjct: 221 VFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACG 280

Query: 92  KSGL-VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           K G+ +++A+D F  M   G+ P+   + +LI    + +  E ++ +F EM +R +  D 
Sbjct: 281 KGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDI 340

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             Y  LID   K    + A ++ + M    +  ++  Y++++ G  + G  +EA  L+H+
Sbjct: 341 FTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHD 400

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           M   G+ PD +   +L+  + + G  D+A+    +M   GL
Sbjct: 401 MKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGL 441



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 98/207 (47%), Gaps = 3/207 (1%)

Query: 47  ICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
           + + ++    + G+   AL + +    +     V  +  ++    +SG  REA+  F  M
Sbjct: 201 LASIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAM 260

Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIE--RARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
              G  PN+  Y  +ID  C K  ++  +A ++F+EM K  + PD   + +LI    +  
Sbjct: 261 KKAGCKPNLITYNTIIDA-CGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGS 319

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
            ++++  +   M   G++ D+  Y +L+  + + G ++ A  +   M  + I P+ +   
Sbjct: 320 LWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYS 379

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
           +++  + + G  +EAI L ++M   G+
Sbjct: 380 TMIDGYGKLGCFEEAIGLYHDMKESGV 406


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  DL  Y +++  LC       ++  L +M   G+  +      L+  Y   G+
Sbjct: 249 MVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 308

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM    I   VVT  +L+  LCK G ++EA D F  M   G +P+V  Y  
Sbjct: 309 WKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKI 368

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G   K C+    +LFD M    + PD   ++ LI  Y       +A+ + N M + G
Sbjct: 369 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHG 428

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  YT+++  L R G + +A   F++MI +G+ PD+     L++     G++ +A 
Sbjct: 429 VKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAK 488

Query: 241 ELQNEMMGRGL 251
           EL  E+M  G+
Sbjct: 489 ELILEIMNNGM 499



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 121/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K D+  Y T+I  LC   K +D+    ++M + G+  +      L+  +   G 
Sbjct: 424 MRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 483

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ E++++ + + +V F  +I+ LCK G + +A + F    + G HP+  VY+ 
Sbjct: 484 LLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSM 543

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C    +E+A  +FD M    + P+   Y  L++GY K     E L+L   M + G
Sbjct: 544 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 603

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y  ++ GL   G    A+V FHEM   GI  ++     +L+  ++    DEAI
Sbjct: 604 IKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAI 663

Query: 241 ELQNEM 246
            L  E+
Sbjct: 664 FLFKEL 669



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 37/280 (13%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGL--TANTVICTTLMDAYFKAGEPSEALS 66
           D+  Y  ++  LC + K   +  LL  M E G   + + V  TT++D +FK G+ ++A  
Sbjct: 185 DVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACD 244

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCK---------------------------------- 92
           L  EM+   I   +VT+  ++  LCK                                  
Sbjct: 245 LFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 304

Query: 93  -SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
            +G  +EA+  F  M    + P+V     L+  LCK   I+ AR++FD M  +   PD  
Sbjct: 305 STGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 364

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +Y  +++GY       +  +L + M   G+  D+  ++ L+   + CG L +A ++F+EM
Sbjct: 365 SYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEM 424

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              G+ PD +   +++      G MD+A+E  N+M+ +G+
Sbjct: 425 RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 464



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 124/251 (49%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG+N   D+  Y  ++ G   +    D   L   M  +G+  +    + L+ AY   G 
Sbjct: 356 MKGQN--PDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGM 413

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + +EM D  ++  VVT+  +I  LC+ G + +A++ F +M D G+ P+   Y  
Sbjct: 414 LDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 473

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    + +A+ L  E+    M  D   ++++I+   K     +A N+ +    VG
Sbjct: 474 LIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVG 533

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y+ L+ G    G +++A  +F  M+  GI P+ ++  +L+  + + G +DE +
Sbjct: 534 QHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGL 593

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G+
Sbjct: 594 SLFREMLQKGI 604



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +I  D+     ++  LC   K ++++ +   M   G   +      +++ Y   G 
Sbjct: 319 MRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGC 378

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L D ML   I   + TF VLI      G++ +A+  F  M D G+ P+V  YT 
Sbjct: 379 LVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTT 438

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LC+   ++ A   F++M  + + PD  AY  LI G+  H S  +A  L   +   G
Sbjct: 439 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNG 498

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD+  ++S++  L + G + +A+ +F   +  G  PD ++   L+  +   G M++A+
Sbjct: 499 MRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKAL 558

Query: 241 ELQNEMMGRGL 251
            + + M+  G+
Sbjct: 559 RVFDAMVSAGI 569



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 112/222 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D+  +  +I         + + ++ +EM+++G+  + V  TT++ A  + G+
Sbjct: 389 MLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGK 448

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+   ++M+D  +      +  LI G C  G + +A +    + + G+  ++  +++
Sbjct: 449 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSS 508

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LCK   I  A+N+FD        PD   Y+ L+DGY      ++AL + + M   G
Sbjct: 509 IINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 568

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           ++ ++  Y +LV G  + G + E   LF EM+ +GI P  IL
Sbjct: 569 IEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 610



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 106/213 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  + +II  LC   +  D++ +       G   + V+ + LMD Y   G+  +AL
Sbjct: 499 MRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKAL 558

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + D M+ + IE  VV +  L++G CK G + E +  F  M   G+ P+  +Y  +IDGL
Sbjct: 559 RVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 618

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
                   A+  F EM +  +  +   Y  ++ G+ K+  F EA+ L   +  + V +D+
Sbjct: 619 FVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDI 678

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
               +++ G+ +   ++EA+ LF  +   G++P
Sbjct: 679 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 117/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  +I G C       +K L+ E+  NG+  + V  +++++   K G 
Sbjct: 459 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGR 518

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A ++ D  ++       V + +L+DG C  G + +A+  F  M   G+ PNV VY  
Sbjct: 519 IMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGT 578

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK   I+   +LF EM ++ + P T  Y  +IDG         A    + MTE G
Sbjct: 579 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESG 638

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + ++   Y  ++ G  +     EA  LF E+    +  D I   +++   ++   ++EA 
Sbjct: 639 IAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 698

Query: 241 ELQNEMMGRGLL 252
           +L   +   GL+
Sbjct: 699 DLFASISRSGLV 710



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 3/205 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-GRMPDF 109
           LMD   +A  P  AL+   ++L + + V ++    L+ G C++    EA+D    R P+ 
Sbjct: 121 LMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPEL 180

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFK 167
           G  P+V  Y+ L+  LC +    +A +L   M +   +  PD  AYT +ID + K     
Sbjct: 181 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVN 240

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A +L   M + G+  DL  Y+S+V  L +   + +A     +M+ +G+LPD     +L+
Sbjct: 241 KACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLI 300

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
             +   G   EA+ +  EM    +L
Sbjct: 301 YGYSSTGQWKEAVRVFKEMRRHSIL 325



 Score = 86.7 bits (213), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 3/222 (1%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS-LLDEMLDSRIEVTVVTFCVLIDGL 90
              ++   GL  + +I   L+  + +A    EAL  LL    +      V ++ +L+  L
Sbjct: 137 FFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 196

Query: 91  CKSGLVREAIDYFGRMPDFGL--HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           C  G   +A D    M + G    P+V  YT +ID   K+  + +A +LF EM +R + P
Sbjct: 197 CDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPP 256

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D   Y++++    K  +  +A     +M   GV  D   Y +L++G S  G  +EA  +F
Sbjct: 257 DLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVF 316

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            EM    ILPD +    L+    + G + EA ++ + M  +G
Sbjct: 317 KEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKG 358



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 72/148 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ ++ +YGT++ G C   + ++   L  EM + G+  +T++   ++D  F AG 
Sbjct: 564 MVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM +S I +   T+ +++ G  K+    EAI  F  +    +  ++     
Sbjct: 624 TVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNT 683

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIP 148
           +I G+ +   +E A++LF  + +  ++P
Sbjct: 684 MIAGMFQTRRVEEAKDLFASISRSGLVP 711



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK    LY  II GL +  +   +K+   EM E+G+  N      ++  +FK   
Sbjct: 599 MLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRC 658

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
             EA+ L  E+    +++ ++T   +I G+ ++  V EA D F  +   GL P V
Sbjct: 659 FDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCV 713


>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           [Oryza sativa Japonica Group]
          Length = 580

 Score =  118 bits (295), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D      ++  L        ++ +  +M   G+  NT +   ++    KAG+
Sbjct: 136 MRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGD 195

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A SL+  M  + + +   +F  +I   C+ G+  EA+    RM + G+  +V  + +
Sbjct: 196 AALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNS 255

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GLCK+  ++ A  L  EM    + PD   YT L+DGY +    +EA+ L+  M  +G
Sbjct: 256 LIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMG 315

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +   +  Y +++  L   G ++E  VL +EM  R +  D + C +L+  + +RG+M  A+
Sbjct: 316 MLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSAL 375

Query: 241 ELQNEMMGRGL 251
           +++  MM  GL
Sbjct: 376 KVKRRMMESGL 386



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 116/251 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   + T+I   C +    ++  +   M+  G+ A+ V   +L+    K   
Sbjct: 206 MDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERR 265

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL EM  + +    VT+  L+DG C++G + EA+   G M   G+ P VA Y A
Sbjct: 266 VKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNA 325

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LC+   ++    L +EM +R +  D      LI+ Y K      AL +K RM E G
Sbjct: 326 ILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESG 385

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD   Y +LV G  +   L EA+    EM+G G  P+  +   ++     + N    +
Sbjct: 386 LQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVL 445

Query: 241 ELQNEMMGRGL 251
            + +E+M RG 
Sbjct: 446 AIPDELMKRGF 456



 Score =  100 bits (250), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 35/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +KAD+  + ++I GLC E + +++  LL EM   G+  + V  TTL+D Y +AG+
Sbjct: 241 MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGD 300

Query: 61  PSEALSL-----------------------------------LDEMLDSRIEVTVVTFCV 85
             EA+ L                                   L+EM + +++   VT   
Sbjct: 301 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNT 360

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI+  CK G +  A+    RM + GL  +   Y AL+ G CK   ++ A+    EM    
Sbjct: 361 LINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAG 420

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+ +  + ++DG     +    L + + + + G   D   Y SL+  L + G +  A 
Sbjct: 421 FSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLAG 480

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +F+EM G+G+  D ++  +L   +   G    A+++ NEM  + L
Sbjct: 481 NVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQL 526



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 91/198 (45%)

Query: 57  KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
           ++  P +AL + D M    +         L+  L KS +   A   F +M   G+  N  
Sbjct: 122 QSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTH 181

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           VY A++    K      A +L   M    +  D  ++  +I  Y +     EA+ ++ RM
Sbjct: 182 VYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERM 241

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              GV  D+  + SL+ GL +   ++EA  L  EM   G+ PD +   +L+  +   G++
Sbjct: 242 ENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDL 301

Query: 237 DEAIELQNEMMGRGLLSG 254
           +EA++L+ EM   G+L G
Sbjct: 302 EEAVKLRGEMEAMGMLPG 319



 Score = 43.9 bits (102), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 42/76 (55%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +    D  +Y ++I  LC +   + +  + +EM+  GL A+ ++  TL  AY  AG+P  
Sbjct: 454 RGFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVA 513

Query: 64  ALSLLDEMLDSRIEVT 79
           AL +L+EM   ++ +T
Sbjct: 514 ALDILNEMAKKQLYIT 529


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 104/203 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y +++ GLC   +  D+ LL   M+  G+  + V  + ++ ++ K      A  +L
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M +++    VVT+  LI+GLCK+G V +A D F  M   G  PN+  Y  LIDGLCK 
Sbjct: 569 ERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKI 628

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +E+A  + + M K+   PD+  YT LI+G       +EA  +   M + G   D   Y
Sbjct: 629 NKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTY 688

Query: 189 TSLVWGLSRCGHLQEARVLFHEM 211
            +L+  L +  +L+    L  EM
Sbjct: 689 GTLLRALQKTNNLELVEQLLKEM 711



 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 36/287 (12%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K    ++  Y +++ GLC   K +++  LL  M  +G + N V   T++D + K G 
Sbjct: 974  MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 1033

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              EA  LL+EM+D   +  VVT+ VL+D  CK G   +AI     M + G  PN+  Y +
Sbjct: 1034 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 1093

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE------------ 168
            L+D  CKK+ +ERA  L   M ++  +P+  +Y  +I G  K     E            
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153

Query: 169  -----------------------ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                                   A  L N + E G   +L  Y SLV GL +     +A 
Sbjct: 1154 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 1213

Query: 206  VLFHEMIGR-GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L  EM  + G  PD I   +++    +   +D A +L  +M+  GL
Sbjct: 1214 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 1260



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 114/246 (46%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K    D   Y T+I GL    + +D+  LL EM +NG   N     T++  + KA    
Sbjct: 223 SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE 282

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            AL LL++M+       VV++  +I+GLCK   V EA     +M   G  PNV  Y  L+
Sbjct: 283 NALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 342

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           DG C+   ++ A  L  +M +R   P+   Y  ++  + +    + A  +   M + G  
Sbjct: 343 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCP 402

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   Y++++ G  + G L+EA  L  +MI RG  PD     +L+    +   +D A EL
Sbjct: 403 PDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQEL 462

Query: 243 QNEMMG 248
               +G
Sbjct: 463 LRMSIG 468



 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 119/242 (49%)

Query: 9    DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
            D+  Y TI+  L    K +D+  L+ +M   G + N V  ++L+    KAG+  EA +LL
Sbjct: 947  DVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 1006

Query: 69   DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
              M  S     +VT+  +IDG CK G + EA      M D G  PNV  YT L+D  CK 
Sbjct: 1007 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 1066

Query: 129  NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
               E A  L + M ++  +P+   Y +L+D + K +  + A  L + M + G   ++ +Y
Sbjct: 1067 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 1126

Query: 189  TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             +++ GL +   + E  +L  +M+    +PD +   +++    +   +D A EL N +  
Sbjct: 1127 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 1186

Query: 249  RG 250
             G
Sbjct: 1187 SG 1188



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 111/230 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y TII G C   K  ++  LL +M   G   +    +TL+DA  KA     A  LL   +
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI 467

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VV + +LI  LCK+  + EA  +   M     +P+V  Y +++DGLCK   I 
Sbjct: 468 GMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIN 527

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFD M    ++PD   Y+ +I  + K  +   A  +  RM E     D+  Y++L+
Sbjct: 528 DAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALI 587

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            GL + G + +A  +F EM+G G  P+ +   +L+    +   +++A E+
Sbjct: 588 NGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEM 637



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 123/249 (49%), Gaps = 1/249 (0%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVIC-TTLMDAYFKAG 59
            M    +  ++ L+  +I GLC   K + +  L  EM+E+G     V   +T++D+  K+G
Sbjct: 903  MPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSG 962

Query: 60   EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
            +  +A  L+++M+       VVT+  L+ GLCK+G + EA     RM   G  PN+  Y 
Sbjct: 963  KVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN 1022

Query: 120  ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             +IDG CK   I+ A +L +EM      P+   YT L+D + K    ++A+ L   M E 
Sbjct: 1023 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 1082

Query: 180  GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            G   +L  Y SL+    +   ++ A  L   MI +G +P+ +   +++    +   + E 
Sbjct: 1083 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 1142

Query: 240  IELQNEMMG 248
            + L  +M+ 
Sbjct: 1143 VLLLEQMLS 1151



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 125/250 (50%), Gaps = 1/250 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +KA   ++ +I+ GLC   +  D+ L   EM +     ++V   T+++   K+  
Sbjct: 187 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 245

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL+EM+D+     V ++  ++ G CK+  V  A+    +M   G  P+V  YT 
Sbjct: 246 LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTT 305

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK + ++ A  + D+M +R   P+   Y  L+DG+ +      A+ L  +MTE G
Sbjct: 306 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y +++    R   ++ A  +   MI  G  PD I   +++    + G + EA 
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAH 425

Query: 241 ELQNEMMGRG 250
           +L  +M+ RG
Sbjct: 426 DLLEQMIRRG 435



 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 119/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + D+    T+I  LC  +  + ++ LL          + V  + L+ A  KA  
Sbjct: 431 MIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKR 490

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA S LD M+ +R    VVT+  ++DGLCKS  + +A   F RM   G+ P+V  Y+ 
Sbjct: 491 LPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSI 550

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   CK N ++ A  + + M +   +PD   Y+ALI+G  K  +  +A ++   M   G
Sbjct: 551 VIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCG 610

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y +L+ GL +   +++A  +   M  +   PD I    L+        ++EA 
Sbjct: 611 CAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAW 670

Query: 241 ELQNEMMGRGLL 252
            +  EM  +G L
Sbjct: 671 RVLREMKDKGCL 682



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 114/246 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + ++  YGT++ G C     + +  L+ +M E G   N +    +M  + +  +
Sbjct: 326 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRND 385

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  +L  M+ +      + +  +I G CK+G +REA D   +M   G  P+VA  + 
Sbjct: 386 MERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLST 445

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   I+ A+ L       D  PD  AY+ LI    K +   EA +  + M +  
Sbjct: 446 LIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNR 505

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y S+V GL +   + +A +LF  M   G++PD +    ++    +  N+D A 
Sbjct: 506 CYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAF 565

Query: 241 ELQNEM 246
           ++   M
Sbjct: 566 KMLERM 571



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 115/244 (47%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G +   D+  Y  +I  LC   +  +++  L  M +N    + V   +++D   K+   +
Sbjct: 468 GMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIN 527

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A  L D M  + +   VVT+ ++I   CK   +  A     RM +    P+V  Y+ALI
Sbjct: 528 DAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALI 587

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +GLCK   +++A ++F EM      P+   Y  LIDG  K    ++A  +   M +    
Sbjct: 588 NGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCT 647

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D   YT L+ GL     L+EA  +  EM  +G LPD +   +LL+   +  N++   +L
Sbjct: 648 PDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQL 707

Query: 243 QNEM 246
             EM
Sbjct: 708 LKEM 711



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 103/209 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G C  ++ E++  LL +M   G   + V  TT+++   K  +  EA  ++D+M+
Sbjct: 268 YNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI 327

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +  V+T+  L+DG C+ G +  A++   +M + G  PN   Y  ++   C++N +E
Sbjct: 328 QRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDME 387

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           RA  +   M +    PD   Y+ +I G+ K    +EA +L  +M   G   D+   ++L+
Sbjct: 388 RAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLI 447

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEI 221
             L +   +  A+ L    IG    PD +
Sbjct: 448 DALCKAAAIDSAQELLRMSIGMDCAPDVV 476



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 3/242 (1%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y T+I GLC  +K  +  LLL +M  N    + V   T++DA  K      A  L + + 
Sbjct: 1126 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 1185

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR--MPDFGLHPNVAVYTALIDGLCKKNC 130
            +S     +VT+  L+ GLCKS    +A +Y  R      G  P++  Y  +IDGLCK   
Sbjct: 1186 ESGCTPNLVTYNSLVHGLCKSRRFDQA-EYLLREMTRKQGCSPDIITYNTVIDGLCKSKR 1244

Query: 131  IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
            ++RA  LF +M    + PD   Y+ +I    K     EA N+   M + G D     Y +
Sbjct: 1245 VDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGT 1304

Query: 191  LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            L+ G  + G+L +A  +   ++ +G  PD +     +    +RG + +A EL   M+  G
Sbjct: 1305 LIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAG 1364

Query: 251  LL 252
            L+
Sbjct: 1365 LV 1366



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 1/251 (0%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M  K    +L  Y +++   C + + E +  LLS M + G   N V   T++    KA +
Sbjct: 1079 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 1138

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              E + LL++ML +     +VTF  +ID +CK+  V  A + F  + + G  PN+  Y +
Sbjct: 1139 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 1198

Query: 121  LIDGLCKKNCIERARNLFDEMP-KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L+ GLCK    ++A  L  EM  K+   PD   Y  +IDG  K +    A  L  +M   
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 1258

Query: 180  GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            G+  D   Y+ ++  L +   + EA  +   M+  G  P  I   +L+    + GN+D+A
Sbjct: 1259 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 1318

Query: 240  IELQNEMMGRG 250
            +E+   ++ +G
Sbjct: 1319 LEILQLLLSKG 1329



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 111/250 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  + +   Y  I+   C  +  E +  +L  M + G   + +  +T++  + KAG+
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGK 420

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL++M+       V     LID LCK+  +  A +           P+V  Y+ 
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSI 480

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LCK   +  A +  D M K    PD   Y +++DG  K     +A  L +RM   G
Sbjct: 481 LIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAG 540

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y+ ++    +  +L  A  +   M     +PD +   +L+    + G +D+A 
Sbjct: 541 VMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAF 600

Query: 241 ELQNEMMGRG 250
           ++  EM+G G
Sbjct: 601 DVFQEMLGCG 610



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 1/243 (0%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            M   N   D+  + TII  +C   + + +  L + ++E+G T N V   +L+    K+  
Sbjct: 1149 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRR 1208

Query: 61   PSEALSLLDEMLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              +A  LL EM   +     ++T+  +IDGLCKS  V  A   F +M   GL P+   Y+
Sbjct: 1209 FDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYS 1268

Query: 120  ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             +I  LCK   ++ A N+ + M K    P    Y  LIDG+ K  +  +AL +   +   
Sbjct: 1269 IVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSK 1328

Query: 180  GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            G   D+  ++  +  LS+ G L++A  L   M+  G++PD +   +LLK   +    ++A
Sbjct: 1329 GSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDA 1388

Query: 240  IEL 242
            ++L
Sbjct: 1389 VDL 1391



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 1/250 (0%)

Query: 7    KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
            + ++  Y  ++   C   K ED+  L+  M E G   N     +L+D + K  E   A  
Sbjct: 1050 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 1109

Query: 67   LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
            LL  M+       VV++  +I GLCK+  V E +    +M      P++  +  +ID +C
Sbjct: 1110 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 1169

Query: 127  KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT-EVGVDLDL 185
            K   ++ A  LF+ + +    P+   Y +L+ G  K   F +A  L   MT + G   D+
Sbjct: 1170 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 1229

Query: 186  NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
              Y +++ GL +   +  A  LF +M+  G+ PD++    ++    +   MDEA  +   
Sbjct: 1230 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL 1289

Query: 246  MMGRGLLSGS 255
            M+  G   G+
Sbjct: 1290 MLKNGFDPGA 1299



 Score = 93.2 bits (230), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 1/226 (0%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           ++  +  L     E     +TV  +TL+  + +AG+   A  L DEM    ++       
Sbjct: 141 QYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHK 200

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            ++ GLC +G   +A+ +F  M      P+   Y  +I+GL K + ++ A  L +EM   
Sbjct: 201 SILRGLCDAGQCSDAVLHFREMSK-TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN 259

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              P+  +Y  ++ G+ K    + AL L  +M   G   D+ +YT+++ GL +   + EA
Sbjct: 260 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEA 319

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             +  +MI RG  P+ I   +L+      G++D A+EL  +M  RG
Sbjct: 320 CRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 365



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 6/204 (2%)

Query: 2    KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
            + +    D+  Y T+I GLC   + + +  L  +M  +GL  + V  + ++ +  K    
Sbjct: 1221 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFM 1280

Query: 62   SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
             EA ++L+ ML +  +   +T+  LIDG CK+G + +A++    +   G +P+V  ++  
Sbjct: 1281 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 1340

Query: 122  IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            ID L K+  + +A  L + M +  ++PDT  Y  L+ G+      ++A++L   M + G 
Sbjct: 1341 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGC 1400

Query: 182  DLDLNAYTSLVWGLSRCGHLQEAR 205
            + D   YT+LV      GHL + +
Sbjct: 1401 EPDNATYTTLV------GHLVDKK 1418



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 1/212 (0%)

Query: 42   TANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
            + N    T L+    +AG+   A  LL EM    +   V+   V+I GLC +  +  A++
Sbjct: 874  SPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALE 933

Query: 102  YFGRMPDFG-LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
             F  M + G   P+V  Y+ ++D L K   ++ A  L ++M  +   P+   Y++L+ G 
Sbjct: 934  LFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGL 993

Query: 161  LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
             K     EA  L  RMT  G   ++  Y +++ G  + G + EA  L  EM+  G  P+ 
Sbjct: 994  CKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNV 1053

Query: 221  ILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +    LL    + G  ++AI L   M+ +G +
Sbjct: 1054 VTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV 1085



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 18/240 (7%)

Query: 13   YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
            Y  +I  LC     +++  +L  M +NG     +   TL+D + K G   +AL +L  +L
Sbjct: 1267 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 1326

Query: 73   DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   VVTF + ID L K G +R+A +    M   GL P+   Y  L+ G C  +  E
Sbjct: 1327 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTE 1386

Query: 133  RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL-NLKNRMTEVG----------- 180
             A +LF+ M +    PD   YT L+   +  +S+K+ L  +   M + G           
Sbjct: 1387 DAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKL 1446

Query: 181  -----VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG-ILPDEILCISLLKKHYERG 234
                 V+ D+    ++V    +CG  Q+AR +F  M  R  +L   +L + +  K  E+ 
Sbjct: 1447 EASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQA 1506



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 10/249 (4%)

Query: 9    DLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPSEALSL 67
            +L  Y +++ GLC   +F+ ++ LL EM ++ G + + +   T++D   K+     A  L
Sbjct: 1192 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 1251

Query: 68   LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
              +ML   +    VT+ ++I  LCK   + EA +    M   G  P    Y  LIDG CK
Sbjct: 1252 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 1311

Query: 128  KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
               +++A  +   +  +   PD   ++  ID   K    ++A  L   M   G+  D   
Sbjct: 1312 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 1371

Query: 188  YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL-----KKHYERGNMDEAIEL 242
            Y +L+ G       ++A  LF  M   G  PD     +L+     KK Y+    D   E+
Sbjct: 1372 YNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYK----DLLAEV 1427

Query: 243  QNEMMGRGL 251
               M+  G 
Sbjct: 1428 SKSMVDTGF 1436



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 74/162 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D+  Y  +I   C ++  + +  +L  MKE     + V  + L++   KAG 
Sbjct: 536 MRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGT 595

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +  EML       +VT+  LIDGLCK   V +A +    M      P+   YT 
Sbjct: 596 VDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTC 655

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           LI+GLC  + +E A  +  EM  +  +PD   Y  L+    K
Sbjct: 656 LINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQK 697



 Score = 50.1 bits (118), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 12/170 (7%)

Query: 6    IKADLPLYGTII--WGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
            ++AD+ L   I+  +G C     +D++ +   M +     N V+ + ++  Y    +  +
Sbjct: 1452 VEADVRLGCAIVDMFGKC--GSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQ 1505

Query: 64   ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALI 122
            A  L   M    +E   VTF  L+   C +GL+  A+D F  +  D+GL P V  ++ +I
Sbjct: 1506 AFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVI 1565

Query: 123  DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
            D L +   +  A +L   MP +   P    +  L+  Y     F+ AL +
Sbjct: 1566 DLLGRLGLVNEAEDLMLGMPCK---PSAATWNCLLSAYKICGDFERALRV 1612



 Score = 48.1 bits (113), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 1/142 (0%)

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
           G    +     L++ L K +   +A +LF    +     DT  Y+ LI G+++      A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
             L + M   G+      + S++ GL   G   +A + F EM  +   PD +   +++  
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMING 239

Query: 230 HYERGNMDEAIELQNEMMGRGL 251
             +   +D+AI L  EM+  G 
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGF 261


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 1/236 (0%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           ++  LC + +F+D       M E G   N V  T  +D   K     +A  +L+EM+   
Sbjct: 214 VVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG 273

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYTALIDGLCKKNCIERA 134
           ++  V T   LIDGLCK G    A   F ++       PNV  YT +I G C++  + RA
Sbjct: 274 LKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA 333

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L   M ++ + P+T  YT LI G+ K  SF  A  L N+M + G   ++  Y +++ G
Sbjct: 334 EMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG 393

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             + G +QEA  +      +G+  D+I    L+ +H ++G++  A++L + M+  G
Sbjct: 394 FCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENG 449



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 105/225 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K  + K ++  Y  +I G C E K   +++LL  M E GL  NT   TTL+  + K G 
Sbjct: 305 IKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGS 364

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+++M        + T+  +IDG CK G ++EA          GL  +   YT 
Sbjct: 365 FDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTI 424

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   CK+  I  A +LFD M +    PD  AYT+LI  Y +    +E+    ++   +G
Sbjct: 425 LITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIG 484

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
           +      YTS++ G  + G    A  +F  M+  G   D IL  S
Sbjct: 485 LLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSILMCS 529



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 114/241 (47%), Gaps = 1/241 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y   I GLC     + +  +L EM   GL  N    TTL+D   K G    A  L  +++
Sbjct: 246 YTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLI 305

Query: 73  -DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
             S  +  V T+ V+I G C+ G +  A     RM + GL PN   YT LI G CK    
Sbjct: 306 KSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSF 365

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +RA  L ++M +   +P+   Y A+IDG+ K    +EA  +    T  G+  D   YT L
Sbjct: 366 DRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTIL 425

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +    + GH+  A  LF  M+  G  PD     SL+  + ++  M+E+ +  ++ +  GL
Sbjct: 426 ITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGL 485

Query: 252 L 252
           L
Sbjct: 486 L 486



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 1/232 (0%)

Query: 21  CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
           C E K E+   LL+ M   G + +   CT ++ +  + G   +       ML+      V
Sbjct: 184 CREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEMGTPPNV 243

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           V +   IDGLCK   V++A      M   GL PNV  +T LIDGLCK    ERA  LF +
Sbjct: 244 VNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLK 303

Query: 141 MPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           + K     P+   YT +I GY +      A  L  RM E G+  + N YT+L+ G  + G
Sbjct: 304 LIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGG 363

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               A  L ++M   G LP+     +++    ++G + EA ++      +GL
Sbjct: 364 SFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGL 415



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M G+ +K ++  + T+I GLC     E + +L L  +K +    N    T ++  Y + G
Sbjct: 269 MVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREG 328

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           + + A  LL  M++  ++    T+  LI G CK G    A +   +M   G  PN+  Y 
Sbjct: 329 KLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYN 388

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+IDG CKK  I+ A  +      + +  D   YT LI  + K      AL+L +RM E 
Sbjct: 389 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN 448

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+ AYTSL+    +   ++E++  F + +  G+LP +    S++  + + G    A
Sbjct: 449 GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMA 508

Query: 240 IELQNEMMGRGLLSGS 255
           + +   M+  G  + S
Sbjct: 509 LRVFERMVQNGCFADS 524



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 109/286 (38%), Gaps = 40/286 (13%)

Query: 7   KADLPLYGTIIWGLCIE----SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           +  LP+   ++ G+        +  ++  ++ EM+ +GL         ++    + G   
Sbjct: 96  RGSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFV 155

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            A  + D M  + +     +F  L+   C+ G V E       M  +G   + A  T ++
Sbjct: 156 YARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVV 215

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
             LC+K   +     F  M +    P+   YTA IDG  K    K+A ++   M   G+ 
Sbjct: 216 RSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLK 275

Query: 183 LDLNAYTSLV-------W-----------------------------GLSRCGHLQEARV 206
            ++  +T+L+       W                             G  R G L  A +
Sbjct: 276 PNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEM 335

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           L   M+ +G+ P+     +L+  H + G+ D A EL N+M   G L
Sbjct: 336 LLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL 381


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 124/243 (51%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+     ++ GLC + +F ++  L  EM + G   N V   TL+D+  KAG   E LSLL
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            EM+   + + +VT+  L+D L K G   E  D         L  N   YT LID LCK 
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKA 392

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A  +  EM ++ + P+   ++++I+G++K     +A   K  M E G++ ++  Y
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ G  +      A  ++H+M+  G+  ++ +  SL+    + G ++EA+ L  +  G
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 249 RGL 251
            GL
Sbjct: 513 SGL 515



 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 130/284 (45%), Gaps = 35/284 (12%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           +N+  D  +Y   I  LCI  KF+++K +L+EM+  GL  +     T++ ++ + GE ++
Sbjct: 548 RNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA------------------------ 99
           AL LL EM  S I+  ++T+  L+ GL  +G V +A                        
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 100 -----------IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
                      +D    M + GLH ++ VY  L+  LC      +A  + +EM    + P
Sbjct: 668 ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAP 727

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           DT  + ALI G+ K      A     +M    +  ++  + +L+ GL   G + EA  + 
Sbjct: 728 DTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVL 787

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            EM   G+ P+ +    L+  H ++ N  EA+ L  EM+G+G +
Sbjct: 788 IEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFV 831



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K+I  ++  + ++I G       + +      MKE G+  N V   TL+D +FK   
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQG 464

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +ML   +EV       L++GL ++G + EA+  F      GL  +   YT 
Sbjct: 465 QDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTT 524

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGL K   +  A     E+  R+M+PD   Y   I+       FKEA ++   M  +G
Sbjct: 525 LIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMG 584

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D + Y +++    R G   +A  L HEM    I P+ I   +L+   +  G +++A 
Sbjct: 585 LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAK 644

Query: 241 ELQNEMMGRGLLSGS 255
            L NEM+  G    S
Sbjct: 645 YLLNEMVSAGFSPSS 659



 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D+  Y T++ G C   + + ++ +L  MKE G+  N    T  +  Y +   
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKG 254

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L + M+ + + + VVT   L+ GLC+ G   EA   F  M   G  PN   Y  
Sbjct: 255 VEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCT 314

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID L K    +   +L  EM  R ++ D   YTAL+D   K     E  +         
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + L+   YT L+  L +  ++ EA  +  EM  + I P+ +   S++    +RG +D+A 
Sbjct: 375 LSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 241 ELQNEMMGRGL 251
           E +  M  RG+
Sbjct: 435 EYKRMMKERGI 445



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 3/225 (1%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVI-CTTLMDAYFKAGEPSEALSLLDEMLD 73
           T++ GLC   + + +  L    +  G+ A  VI   TL+  Y + G+   ALS+ D M  
Sbjct: 140 TLLAGLCRNGQVDAAAALAD--RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTA 197

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             + + VV +  L+ G C++G V  A      M + G+ PNVA YT  I   C+   +E 
Sbjct: 198 QGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEE 257

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           A +L++ M +  ++ D    +AL+ G  +   F EA  L   M +VG   +   Y +L+ 
Sbjct: 258 AFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLID 317

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
            L++ G  +E   L  EM+ RG++ D +   +L+    ++G  DE
Sbjct: 318 SLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDE 362



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 11/234 (4%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD-----EMLDSRIEV 78
           S    +  +L+EM + G+  + V   TL+    + G+   A +L D       LD     
Sbjct: 114 SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALD----- 168

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
            V+ +  LI G C+ G    A+    RM   GL  +V  Y  L+ G C+   ++ AR + 
Sbjct: 169 -VIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
           D M +  + P+   YT  I  Y + +  +EA +L   M   GV LD+   ++LV GL R 
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRD 287

Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           G   EA  LF EM   G +P+ +   +L+    + G   E + L  EM+ RG++
Sbjct: 288 GRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 123/252 (48%), Gaps = 2/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAG 59
           MK + I  ++  YGT+I G   + + +D+ L +  +M   G+  N  I  +L++   + G
Sbjct: 440 MKERGINPNVVTYGTLIDGF-FKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNG 498

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           +  EA++L  +   S + +  V +  LIDGL K+G +  A  +   + D  + P+  VY 
Sbjct: 499 KIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYN 558

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
             I+ LC     + A+++  EM    + PD + Y  +I  + +     +AL L + M   
Sbjct: 559 VFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMS 618

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            +  +L  Y +LV GL   G +++A+ L +EM+  G  P  +    +L+   +   +D  
Sbjct: 619 SIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVI 678

Query: 240 IELQNEMMGRGL 251
           +++   MM  GL
Sbjct: 679 LDIHEWMMNAGL 690



 Score = 95.1 bits (235), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 35/272 (12%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +++ GL    K E++  L  +   +GL+ + V  TTL+D  FKAG+   A     E++D 
Sbjct: 489 SLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +    V + V I+ LC  G  +EA      M + GL P+ + Y  +I   C+K    +A
Sbjct: 549 NMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKA 608

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGY-------------------------LKHESFKEA 169
             L  EM    + P+   Y  L+ G                          L H    +A
Sbjct: 609 LKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 170 ----------LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
                     L++   M   G+  D+  Y +L+  L   G  ++A V+  EM+G GI PD
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            I   +L+  H +  ++D A     +M+ + +
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNI 760



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 117/281 (41%), Gaps = 35/281 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  DL  Y  ++  L  + K ++ K  L     + L+ N V  T L+DA  KA  
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHN 394

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L EM +  I   VVTF  +I+G  K GL+ +A +Y   M + G++PNV  Y  
Sbjct: 395 VDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGT 454

Query: 121 LIDG-----------------LC------------------KKNCIERARNLFDEMPKRD 145
           LIDG                 LC                  +   IE A  LF +     
Sbjct: 455 LIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG 514

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           +  D   YT LIDG  K      A      + +  +  D   Y   +  L   G  +EA+
Sbjct: 515 LSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAK 574

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            +  EM   G+ PD+    +++  H  +G   +A++L +EM
Sbjct: 575 SILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEM 615



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 95/220 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    + AD+ +Y T++  LC       + ++L EM  +G+  +T+    L+  + K+  
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +   +ML   I   + TF  L+ GL   G + EA      M   GL PN   Y  
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDI 804

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G  K++    A  L+ EM  +  +P  + Y ALI  + K     +A  L   M + G
Sbjct: 805 LVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRG 864

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           V      Y  LV G SR  +  E +    +M  +G  P +
Sbjct: 865 VHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSK 904



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 89/211 (42%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D   +  +I G C  S  +++    ++M    ++ N     TL+      G 
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGR 779

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA ++L EM  S +E   +T+ +L+ G  K     EA+  +  M   G  P V+ Y A
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI    K   + +A+ LF +M KR + P +  Y  L+ G+ +  +  E       M E G
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
                   + +    S+ G   +A+ L   +
Sbjct: 900 FSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930


>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 4/225 (1%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR-IEVTVVTFC 84
           F++S  +   MKE G++ + V   +L+    K G  S A  L DEMLD+  +     TF 
Sbjct: 181 FQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFN 240

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI G C + +V E   +F  M  F   P+V  Y  L+DGLC+   ++ A N+   M K+
Sbjct: 241 ILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKK 300

Query: 145 --DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
             ++ P+   YT LI GY   +   EAL+L   M   G+  +   Y +L+ GL     L 
Sbjct: 301 SPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLD 360

Query: 203 EARVLFHEMIGR-GILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           + + +   M+G  G +PD     +L+K H   G ++EA  +  +M
Sbjct: 361 KIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKM 405



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 10/255 (3%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   +  +I G C+ S  ++      EM       + V   TL+D   +AG+   A 
Sbjct: 232 VTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAH 291

Query: 66  SLLDEML--DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           +++  M+     +   VVT+  LI G C    + EA+     M   GL PN   Y  LI 
Sbjct: 292 NVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQ 351

Query: 124 GLCKKNCIERARNLFDEMP-KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           GLC+   +++ + + + M      IPDT     LI  +      +EA ++  +M+E+ V 
Sbjct: 352 GLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQ 411

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY-------ERGN 235
            D   Y+ LV  L + G  + A   F E+  + IL  ++ C  L+  +          G 
Sbjct: 412 PDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGK 471

Query: 236 MDEAIELQNEMMGRG 250
             +A  +  ++M RG
Sbjct: 472 TKKAERVFRQLMKRG 486



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 9/257 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
           M  + +K +   Y T+I GLC   K +  K +L  M  + G   +T    TL+ A+   G
Sbjct: 334 MVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMG 393

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-------DFGLH 112
           +  EA S+ ++M + R++    T+ VL+  LC+ G  R A ++F  +        D G  
Sbjct: 394 KLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCK 453

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P VA Y  + + LC     ++A  +F ++ KR    D  +Y  LI G+ +  + +   +L
Sbjct: 454 PLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDL 512

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M       D   Y  ++ GL + G    A     +M+    LP   +  S+L    E
Sbjct: 513 LVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVE 572

Query: 233 RGNMDEAIELQNEMMGR 249
           +G   E+  L   M+ R
Sbjct: 573 KGCAHESASLVKLMLER 589



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 3/204 (1%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD- 108
           +L+ +Y  AG   E++ +   M +  +  +VVTF  L+  + K G    A   F  M D 
Sbjct: 170 SLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 229

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
           +G+ P+   +  LI G C  + ++     F EM +    PD   Y  L+DG  +    K 
Sbjct: 230 YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKI 289

Query: 169 ALNLKNRMTEVGVDLDLN--AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           A N+   M +   +L  N   YT+L+ G      + EA  L  EM+ RG+ P++I   +L
Sbjct: 290 AHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTL 349

Query: 227 LKKHYERGNMDEAIELQNEMMGRG 250
           ++   E   +D+  E+   M+G G
Sbjct: 350 IQGLCEAQKLDKIKEILEGMVGDG 373



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 9/226 (3%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K  N+  ++  Y T+I G C++    ++  LL+EM   GL  N +   TL+    +A + 
Sbjct: 300 KSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKL 359

Query: 62  SEALSLLDEML-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +   +L+ M+ D        T   LI   C  G + EA   F +M +  + P+ A Y+ 
Sbjct: 360 DKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSV 419

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-------PDTTAYTALIDGYLKHESFKEALNLK 173
           L+  LC++    RA   FDE+ +++++       P   AY  + +    +   K+A  + 
Sbjct: 420 LVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVF 479

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            ++ + G   D  +Y +L+ G  R G  +    L   M+ R  +PD
Sbjct: 480 RQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPD 524



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 3/172 (1%)

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM- 141
           F  LI     +GL +E+I  F  M + G+ P+V  + +L+  + K+     A+ LFDEM 
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
               + PDT  +  LI G+  +    E       M+    D D+  Y +LV GL R G +
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287

Query: 202 QEARVLFHEMIGRG--ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + A  +   M+ +   + P+ +   +L++ +  + +M EA+ L  EM+ RGL
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGL 339



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 82/208 (39%), Gaps = 6/208 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D P Y T+I G C E   E    LL  M       +      ++D   K G+P  A   L
Sbjct: 489 DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSL 548

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT----ALIDG 124
           ++ML S    T   F  ++  L + G   E+      M +  +  N+ + T     L+  
Sbjct: 549 EKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSF 608

Query: 125 LCK-KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           LC+ +  +E  + L   + KR  + D    + +I G  K     EA  L   + E G+  
Sbjct: 609 LCQSRKLLEAQKMLLFSLEKRQSV-DIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQH 667

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            L     L   L   G L EA+ +  +M
Sbjct: 668 RLTCQEDLRISLEAEGRLNEAKFVSKKM 695



 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 12/213 (5%)

Query: 40  GLTANTVICTTLMDAYFKAGEP--SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           GL A T    +   A     EP   E  S L E+  S  + TV+    LI    K     
Sbjct: 56  GLKAATKTKRSQAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAK----- 110

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD---MIPDTTAYT 154
            A+ +F  +   G   N   Y  +I+ L +   +  ARN    + K+    +      + 
Sbjct: 111 -ALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFN 169

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +LI  Y     F+E++ +   M E+GV   +  + SL+  + + G    A+ LF EM+  
Sbjct: 170 SLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 229

Query: 215 -GILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            G+ PD      L++       +DE      EM
Sbjct: 230 YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEM 262


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 36/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    ++  Y +++ GLC   K +++  LL  M  +G + N V   T++D + K G 
Sbjct: 246 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 305

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL+EM+D   +  VVT+ VL+D  CK G   +AI     M + G  PN+  Y +
Sbjct: 306 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 365

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE------------ 168
           L+D  CKK+ +ERA  L   M ++  +P+  +Y  +I G  K     E            
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425

Query: 169 -----------------------ALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                                  A  L N + E G   +L  Y SLV GL +     +A 
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 485

Query: 206 VLFHEMIGR-GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L  EM  + G  PD I   +++    +   +D A +L  +M+  GL
Sbjct: 486 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGL 532



 Score =  116 bits (290), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 118/242 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y TI+  L    K +D+  L+  M   G + N V  ++L+    KAG+  EA +LL
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 278

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M  S     +VT+  +IDG CK G + EA      M D G  PNV  YT L+D  CK 
Sbjct: 279 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 338

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              E A  L + M ++  +P+   Y +L+D + K +  + A  L + M + G   ++ +Y
Sbjct: 339 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 398

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ GL +   + E  +L  +M+    +PD +   +++    +   +D A EL N +  
Sbjct: 399 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 458

Query: 249 RG 250
            G
Sbjct: 459 SG 460



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 1/248 (0%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K    D   Y T+I GL    + +D+  LL EM +NG   N     T++  + KA     
Sbjct: 38  KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVEN 97

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL LL++M+       VV++  +I+GLCK   V EA     +M   G  PNV  Y  L+D
Sbjct: 98  ALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVD 157

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG-VD 182
           G C+   ++ A  L  +M +R   P+   Y  ++ G         AL L   M E G   
Sbjct: 158 GFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCP 217

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  Y+++V  L + G + +A  L   M+ +G  P+ +   SLL    + G +DEA  L
Sbjct: 218 PDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 277

Query: 243 QNEMMGRG 250
              M   G
Sbjct: 278 LQRMTRSG 285



 Score =  110 bits (275), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +KA   ++ +I+ GLC   +  D+ L   EM +     ++V   T+++   K+  
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ LL+EM+D+     V ++  ++ G CK+  V  A+    +M   G  P+V  YT 
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK + ++ A  + D+M +R   P+   Y  L+DG+ +      A+ L  +MTE G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS-LLKKHYERGNMDEA 239
              +   Y +++ GL     L  A  LF EM   G  P ++   S ++    + G +D+A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 240 IELQNEMMGRG 250
             L   M+ +G
Sbjct: 240 CRLVEAMVSKG 250



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 3/242 (1%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I GLC  +K  +  LLL +M  N    + V   T++DA  K      A  L + + 
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 457

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR--MPDFGLHPNVAVYTALIDGLCKKNC 130
           +S     +VT+  L+ GLCKS    +A +Y  R      G  P++  Y  +IDGLCK   
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQA-EYLLREMTRKQGCSPDIITYNTVIDGLCKSKR 516

Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
           ++RA  LF +M    + PD   Y+ +I    K     EA N+   M + G D     Y +
Sbjct: 517 VDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGT 576

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           L+ G  + G+L +A  +   ++ +G  PD +     +    +RG + +A EL   M+  G
Sbjct: 577 LIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAG 636

Query: 251 LL 252
           L+
Sbjct: 637 LV 638



 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 1/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K    +L  Y +++   C + + E +  LLS M + G   N V   T++    KA +
Sbjct: 351 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + LL++ML +     +VTF  +ID +CK+  V  A + F  + + G  PN+  Y +
Sbjct: 411 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 470

Query: 121 LIDGLCKKNCIERARNLFDEMP-KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           L+ GLCK    ++A  L  EM  K+   PD   Y  +IDG  K +    A  L  +M   
Sbjct: 471 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD 530

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D   Y+ ++  L +   + EA  +   M+  G  P  I   +L+    + GN+D+A
Sbjct: 531 GLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA 590

Query: 240 IELQNEMMGRG 250
           +E+   ++ +G
Sbjct: 591 LEILQLLLSKG 601



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 120/253 (47%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D+  Y T+I GLC   + +++  ++ +M + G   N +   TL+D + + G+
Sbjct: 105 MVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 164

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG-LHPNVAVYT 119
              A+ L+ +M +       +T+  ++ GLC    +  A+  F  M + G   P+V  Y+
Sbjct: 165 LDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYS 224

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            ++D L K   ++ A  L + M  +   P+   Y++L+ G  K     EA  L  RMT  
Sbjct: 225 TIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 284

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   ++  Y +++ G  + G + EA  L  EM+  G  P+ +    LL    + G  ++A
Sbjct: 285 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 344

Query: 240 IELQNEMMGRGLL 252
           I L   M+ +G +
Sbjct: 345 IGLVEVMVEKGYV 357



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 119/243 (48%), Gaps = 1/243 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   N   D+  + TII  +C   + + +  L + ++E+G T N V   +L+    K+  
Sbjct: 421 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRR 480

Query: 61  PSEALSLLDEMLDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             +A  LL EM   +     ++T+  +IDGLCKS  V  A   F +M   GL P+   Y+
Sbjct: 481 FDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYS 540

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I  LCK   ++ A N+ + M K    P    Y  LIDG+ K  +  +AL +   +   
Sbjct: 541 IVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSK 600

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+  ++  +  LS+ G L++A  L   M+  G++PD +   +LLK   +    ++A
Sbjct: 601 GSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDA 660

Query: 240 IEL 242
           ++L
Sbjct: 661 VDL 663



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 1/250 (0%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++  Y  ++   C   K ED+  L+  M E G   N     +L+D + K  E   A  
Sbjct: 322 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 381

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL  M+       VV++  +I GLCK+  V E +    +M      P++  +  +ID +C
Sbjct: 382 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 441

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT-EVGVDLDL 185
           K   ++ A  LF+ + +    P+   Y +L+ G  K   F +A  L   MT + G   D+
Sbjct: 442 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 501

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +++ GL +   +  A  LF +M+  G+ PD++    ++    +   MDEA  +   
Sbjct: 502 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL 561

Query: 246 MMGRGLLSGS 255
           M+  G   G+
Sbjct: 562 MLKNGFDPGA 571



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 104/204 (50%), Gaps = 6/204 (2%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           + +    D+  Y T+I GLC   + + +  L  +M  +GL  + V  + ++ +  K    
Sbjct: 493 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFM 552

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EA ++L+ ML +  +   +T+  LIDG CK+G + +A++    +   G +P+V  ++  
Sbjct: 553 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 612

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           ID L K+  + +A  L + M +  ++PDT  Y  L+ G+      ++A++L   M + G 
Sbjct: 613 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGC 672

Query: 182 DLDLNAYTSLVWGLSRCGHLQEAR 205
           + D   YT+LV      GHL + +
Sbjct: 673 EPDNATYTTLV------GHLVDKK 690



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 10/249 (4%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           +L  Y +++ GLC   +F+ ++ LL EM ++ G + + +   T++D   K+     A  L
Sbjct: 464 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 523

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
             +ML   +    VT+ ++I  LCK   + EA +    M   G  P    Y  LIDG CK
Sbjct: 524 FLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCK 583

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              +++A  +   +  +   PD   ++  ID   K    ++A  L   M   G+  D   
Sbjct: 584 TGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVT 643

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL-----KKHYERGNMDEAIEL 242
           Y +L+ G       ++A  LF  M   G  PD     +L+     KK Y+    D   E+
Sbjct: 644 YNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYK----DLLAEV 699

Query: 243 QNEMMGRGL 251
              M+  G 
Sbjct: 700 SKSMVDTGF 708



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 1/173 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I  LC     +++  +L  M +NG     +   TL+D + K G   +AL +L  +L
Sbjct: 539 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 598

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                  VVTF + ID L K G +R+A +    M   GL P+   Y  L+ G C  +  E
Sbjct: 599 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTE 658

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL-NLKNRMTEVGVDLD 184
            A +LF+ M +    PD   YT L+   +  +S+K+ L  +   M + G  L+
Sbjct: 659 DAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLN 711


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 114/240 (47%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS-LLDEM 71
           Y  +I   C   + E        + + G   N ++ + L+     A    EA   LL  M
Sbjct: 93  YSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRM 152

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
            +      VV +  +I+G  + G V +A + F  M D G+ PNV  YT +IDGLCK   +
Sbjct: 153 SEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVV 212

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           +RA+ +F +M  R + PD   Y  LI GYL    +KE + +   M+  G++ D   Y  L
Sbjct: 213 DRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALL 272

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           +  L + G  +EAR+ F  M  +GI PD  +   LL  +  +G + E     + M+G G+
Sbjct: 273 LDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGV 332



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K IK D+ +Y  ++ G   +    +    L  M  NG++ N  I   +  AY K   
Sbjct: 292 MFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAM 351

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ + ++M    +   VV+F  LID LCK G V +A+  F +M + G+ PN+ V+++
Sbjct: 352 IEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSS 411

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ GLC     E+A  LF E+  + +  D   +  L+          EA  L + M  VG
Sbjct: 412 LVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVG 471

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++ +Y +LV G    G + EA  L   M+  G+ P+E     LL+ + +   +D+A 
Sbjct: 472 VRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAY 531

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G+
Sbjct: 532 SLFREMLMKGV 542



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 128/251 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y T+I GLC     + +K +  +M + G+  +      L+  Y   G+
Sbjct: 187 MMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGK 246

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E + +L+EM    +E   +T+ +L+D LCK+G  REA  +F  M   G+ P+VA+Y  
Sbjct: 247 WKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAI 306

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +    +  D M    + P+   +  +   Y K    +EA+++ N+M + G
Sbjct: 307 LLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQG 366

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+ ++ +L+  L + G + +A + F++MI  G+ P+  +  SL+      G  ++A 
Sbjct: 367 LSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAE 426

Query: 241 ELQNEMMGRGL 251
           EL  E++ +G+
Sbjct: 427 ELFFEVLDQGI 437



 Score =  110 bits (275), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 1/246 (0%)

Query: 7   KADLPLYGTIIWGLCIESKF-EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           + ++ +   ++ GLC   +  E + +LL  M E G   + V   T+++ +F+ G+  +A 
Sbjct: 122 RVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAY 181

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           +L  EM+D  I   VVT+  +IDGLCK+ +V  A   F +M D G+ P+   Y  LI G 
Sbjct: 182 NLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGY 241

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
                 +    + +EM    + PD   Y  L+D   K+   +EA    + M   G+  D+
Sbjct: 242 LSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDV 301

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  L+ G +  G L E       M+G G+ P+  +   +   + ++  ++EA+ + N+
Sbjct: 302 AIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNK 361

Query: 246 MMGRGL 251
           M  +GL
Sbjct: 362 MRQQGL 367



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 114/243 (46%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I G   E + E +  L  EM + G+  N V  TT++D   KA     A  + 
Sbjct: 160 DVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVF 219

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            +M+D  ++    T+  LI G   +G  +E +     M   GL P+   Y  L+D LCK 
Sbjct: 220 QQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKN 279

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                AR  FD M ++ + PD   Y  L+ GY    +  E  +  + M   GV  +   +
Sbjct: 280 GRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIF 339

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             +    ++   ++EA  +F++M  +G+ PD +   +L+    + G +D+A+   N+M+ 
Sbjct: 340 NIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMIN 399

Query: 249 RGL 251
            G+
Sbjct: 400 EGV 402



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 118/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D   Y  ++  LC   +  +++L    M   G+  +  I   L+  Y   G 
Sbjct: 257 MSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGA 316

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SE  S LD M+ + +      F ++     K  ++ EA+  F +M   GL P+V  + A
Sbjct: 317 LSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGA 376

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LID LCK   ++ A   F++M    + P+   +++L+ G      +++A  L   + + G
Sbjct: 377 LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + +D   + +L+  L   G + EA+ L   MI  G+ P+ I   +L+  H   G +DEA 
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAA 496

Query: 241 ELQNEMMGRGL 251
           +L + M+  GL
Sbjct: 497 KLLDVMVSNGL 507



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 99/212 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D+  +G +I  LC   + +D+ L  ++M   G+T N  + ++L+      G+
Sbjct: 362 MRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGK 421

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L  E+LD  I V  V F  L+  LC  G V EA      M   G+ PNV  Y  
Sbjct: 422 WEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNT 481

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G C    I+ A  L D M    + P+   YT L+ GY K     +A +L   M   G
Sbjct: 482 LVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKG 541

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           V   +  Y +++ GL + G   EA  L+  MI
Sbjct: 542 VTPVVATYNTILHGLFQTGRFSEANELYLNMI 573



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 116/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  ++ ++ ++++GLC   K+E ++ L  E+ + G+  + V   TLM      G 
Sbjct: 397 MINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGR 456

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L+D M+   +   V+++  L+ G C +G + EA      M   GL PN   YT 
Sbjct: 457 VMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTI 516

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G CK   ++ A +LF EM  + + P    Y  ++ G  +   F EA  L   M    
Sbjct: 517 LLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR 576

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  Y  ++ GL +   + EA  +F  +  +    D +    ++    + G  ++A+
Sbjct: 577 TKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAM 636

Query: 241 ELQNEMMGRGLL 252
           +L   +   GL+
Sbjct: 637 DLFATISAYGLV 648



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 113/234 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ ++  Y T++ G C+  + +++  LL  M  NGL  N    T L+  Y KA    +A 
Sbjct: 472 VRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAY 531

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  EML   +   V T+  ++ GL ++G   EA + +  M +     ++  Y  +++GL
Sbjct: 532 SLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGL 591

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK N ++ A  +F  +  +D   D+  +  +I   LK    ++A++L   ++  G+  D+
Sbjct: 592 CKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDV 651

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y  +   L   G L E   LF  M   G  P+  +  +L+++   RG++  A
Sbjct: 652 VTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705



 Score = 84.0 bits (206), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 1/180 (0%)

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            S++     T+ +LI   C+ G +      FG +   G   NV V + L+ GLC    ++
Sbjct: 83  SSKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVD 142

Query: 133 RARN-LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
            A + L   M +    PD  AY  +I+G+ +    ++A NL   M + G+  ++  YT++
Sbjct: 143 EATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTV 202

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + GL +   +  A+ +F +MI RG+ PD      L+  +   G   E +++  EM   GL
Sbjct: 203 IDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGL 262



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 105/235 (44%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + I  D   + T++  LC E +  +++ L+  M   G+  N +   TL+  +   G   E
Sbjct: 435 QGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDE 494

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  LLD M+ + ++    T+ +L+ G CK+  V +A   F  M   G+ P VA Y  ++ 
Sbjct: 495 AAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILH 554

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GL +      A  L+  M       D   Y  +++G  K+    EA  +  R+      L
Sbjct: 555 GLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQL 614

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
           D   +  ++  L + G  ++A  LF  +   G++PD +    + +   E G++ E
Sbjct: 615 DSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGE 669



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 102/234 (43%), Gaps = 1/234 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K +   Y  ++ G C   + +D+  L  EM   G+T       T++   F+ G 
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA  L   M++SR +  + T+ ++++GLCK+  V EA   F R+       +   +  
Sbjct: 562 FSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNI 621

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  L K    E A +LF  +    ++PD   Y  + +  ++  S  E   L + M + G
Sbjct: 622 MIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
              + +   +LV  L   G +  A V  +++  +     E    S+L   Y RG
Sbjct: 682 TAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKN-FSLEASTTSMLISLYSRG 734



 Score = 44.7 bits (104), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 75/207 (36%), Gaps = 35/207 (16%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     K D+  Y  I+ GLC ++ F D                                
Sbjct: 572 MINSRTKCDIYTYNIILNGLC-KNNFVD-------------------------------- 598

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +   +     ++  VTF ++I  L K G   +A+D F  +  +GL P+V  Y  
Sbjct: 599 --EAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRL 656

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           + + L ++  +     LF  M K    P++    AL+   L       A     ++ E  
Sbjct: 657 IAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKN 716

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVL 207
             L+ +  + L+   SR  +   A+ L
Sbjct: 717 FSLEASTTSMLISLYSRGEYQPHAKSL 743


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y +II  LC     + +  +L+ M ++G+  + +   +++  +  +G+
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 166

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L+D LCK+G   EA   F  M   GL P++  Y  
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 226

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + P+   ++ L+  Y K E  +EA+ + ++M + G
Sbjct: 227 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 286

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +++  L + G +++A + F +MI  G+ PD I+  SL+         ++A 
Sbjct: 287 LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE 346

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 347 ELFLEMLDRGI 357



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 10/219 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K D+  YGT++ G   +    +   LL  M  NG+  N  + + L+ AY K  +
Sbjct: 212 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  +M    +    VT+  +ID LCKSG V +A+ YF +M D GL P+  VY +
Sbjct: 272 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC  +  E+A  LF EM  R +   T  + ++ID + K     E+  L + M  +G
Sbjct: 332 LIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIG 391

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           V  D+             G   EA+ LF      G++P+
Sbjct: 392 VKPDIITL----------GRNDEAKDLFVAFSSNGLVPN 420



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   Y +I+ G C   + +++ + L +M+ +G+  + V   +LMD   K G 
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 201

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + D M    ++  + T+  L+ G    G + E       M   G+HPN  V++ 
Sbjct: 202 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 261

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+    K+  +E A  +F +M ++ + P+   Y  +ID   K    ++A+    +M + G
Sbjct: 262 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y SL+  L      ++A  LF EM+ RGI    I   S++  H + G + E+ 
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESG 381

Query: 241 ELQNEMMGRGL 251
           +L + M+  G+
Sbjct: 382 KLFDLMVRIGV 392



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 103/221 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y +++  LC   +  +++ +   M + GL  +     TL+  Y   G 
Sbjct: 177 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGA 236

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD M+ + I      F +L+    K   V EA+  F +M   GL+PN   Y  
Sbjct: 237 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   +E A   F++M    + PD+  Y +LI      + +++A  L   M + G
Sbjct: 297 VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           + L    + S++    + G + E+  LF  M+  G+ PD I
Sbjct: 357 ICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDII 397



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 31/219 (14%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG------------ 110
           +A  + DE+L   I   V ++ +L++GLC     +EA++    M D G            
Sbjct: 35  DARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 111 ------------------LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
                             + PNV  Y ++I  LCK   +++A  +   M K  ++PD   
Sbjct: 94  VINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMT 153

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y +++ G+      KEA+    +M   GV+ D+  Y SL+  L + G   EAR +F  M 
Sbjct: 154 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 213

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            RG+ PD     +LL+ +  +G + E   L + M+  G+
Sbjct: 214 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 252



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 93/237 (39%), Gaps = 30/237 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDA--YFKA 58
           M+ + +  +   YGT+I  LC   + ED+ L   +M + GL  ++++  +L+ +   F  
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341

Query: 59  GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF------GRMPDF--- 109
            E +E L L  EMLD  I ++ + F  +ID  CK G V E+   F      G  PD    
Sbjct: 342 WEKAEELFL--EMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL 399

Query: 110 ----------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
                           GL PN   Y  + + +  +  +E    LF  M       D+   
Sbjct: 400 GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGML 459

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             ++   L+      A    + + E    L+ +   SL   L   G  QE  +   E
Sbjct: 460 NFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST-ASLFIDLLSGGKYQEYHIFLPE 515



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 10/123 (8%)

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL--DLNAYT 189
           E AR++FDE+ +R  IPD  +Y  L++G       +EAL L + M + G D   D+ +Y+
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +++ G  + G L        +M+ + I P+ +   S++    +   +D+A+E+   M+  
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 250 GLL 252
           G++
Sbjct: 146 GVM 148


>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 401

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y +II  LC     + +  +L+ M ++G+  + +   +++  +  +G+
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 166

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L+D LCK+G   EA   F  M   GL P++  Y  
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 226

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + P+   ++ L+  Y K E  +EA+ + ++M + G
Sbjct: 227 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 286

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +++  L + G +++A + F +MI  G+ PD I+  SL+         ++A 
Sbjct: 287 LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE 346

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 347 ELFLEMLDRGI 357



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 95/185 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K D+  YGT++ G   +    +   LL  M  NG+  N  + + L+ AY K  +
Sbjct: 212 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  +M    +    VT+  +ID LCKSG V +A+ YF +M D GL P+  VY +
Sbjct: 272 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC  +  E+A  LF EM  R +   T  + ++ID + K     E+  L + M  +G
Sbjct: 332 LIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIG 391

Query: 181 VDLDL 185
           V  D+
Sbjct: 392 VKPDI 396



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   Y +I+ G C   + +++ + L +M+ +G+  + V   +LMD   K G 
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 201

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + D M    ++  + T+  L+ G    G + E       M   G+HPN  V++ 
Sbjct: 202 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 261

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+    K+  +E A  +F +M ++ + P+   Y  +ID   K    ++A+    +M + G
Sbjct: 262 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y SL+  L      ++A  LF EM+ RGI    I   S++  H + G + E+ 
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESG 381

Query: 241 ELQNEMMGRGL 251
           +L + M+  G+
Sbjct: 382 KLFDLMVRIGV 392



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 103/221 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y +++  LC   +  +++ +   M + GL  +     TL+  Y   G 
Sbjct: 177 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGA 236

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD M+ + I      F +L+    K   V EA+  F +M   GL+PN   Y  
Sbjct: 237 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   +E A   F++M    + PD+  Y +LI      + +++A  L   M + G
Sbjct: 297 VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           + L    + S++    + G + E+  LF  M+  G+ PD I
Sbjct: 357 ICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDII 397



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 31/219 (14%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG------------ 110
           +A  + DE+L   I   V ++ +L++GLC     +EA++    M D G            
Sbjct: 35  DARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 111 ------------------LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
                             + PNV  Y ++I  LCK   +++A  +   M K  ++PD   
Sbjct: 94  VINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMT 153

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y +++ G+      KEA+    +M   GV+ D+  Y SL+  L + G   EAR +F  M 
Sbjct: 154 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 213

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            RG+ PD     +LL+ +  +G + E   L + M+  G+
Sbjct: 214 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 252



 Score = 47.4 bits (111), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 10/123 (8%)

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL--DLNAYT 189
           E AR++FDE+ +R  IPD  +Y  L++G       +EAL L + M + G D   D+ +Y+
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +++ G  + G L        +M+ + I P+ +   S++    +   +D+A+E+   M+  
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 250 GLL 252
           G++
Sbjct: 146 GVM 148



 Score = 42.4 bits (98), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 46/83 (55%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D  +Y ++I  LCI  K+E ++ L  EM + G+  +T+   +++D++ K G 
Sbjct: 317 MIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376

Query: 61  PSEALSLLDEMLDSRIEVTVVTF 83
             E+  L D M+   ++  ++T 
Sbjct: 377 VIESGKLFDLMVRIGVKPDIITL 399


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 116/242 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ +L  Y T+I GLC +    D+  L S +   G+  + V   +L+      G+  EA 
Sbjct: 191 VRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREAT 250

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            LL  M+   I     TF +L+D LCK G + EA   F  M   G  P++  Y AL++G 
Sbjct: 251 RLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGF 310

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  N +  AR LF+ M KR + PD   Y  LI+GY K +   EA+ L   +    +  +L
Sbjct: 311 CLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNL 370

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y SL+ GL + G +   + L  EM  RG  PD +     L    +    ++AI L  +
Sbjct: 371 ATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQ 430

Query: 246 MM 247
           ++
Sbjct: 431 IV 432



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 120/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG++I GLC   +  D+  LL +M+E+ +  N +  +T++D   K    ++AL L   + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I V VV +  LI G C  G  REA      M    ++P+   +  L+D LCK+  I 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A+ +F  M KR   PD   Y AL++G+    +  EA  L NRM + G++ D+  Y  L+
Sbjct: 283 EAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +   + EA VLF E+  + ++P+     SL+    + G M    EL +EM  RG
Sbjct: 343 NGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRG 400



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K I   +     +I   C ++    +  LL  + + G   N V   TL++ +   G 
Sbjct: 81  LHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGM 140

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S+A++   +++     +   ++  LI+GLCK+G  R+A+    +M +  + PN+  Y+ 
Sbjct: 141 VSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYST 200

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDGLCK   I  A  LF  +  R ++ D  AY +LI G      ++EA  L   M    
Sbjct: 201 VIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGN 260

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D   +  LV  L + G + EA+ +F  M+ RG  PD +   +L++      N+ EA 
Sbjct: 261 INPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEAR 320

Query: 241 ELQNEMMGRGL 251
           EL N M+ RGL
Sbjct: 321 ELFNRMVKRGL 331



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 1/219 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  + I  D+  Y ++I G C   ++ ++  LL+ M    +  +      L+DA  K G 
Sbjct: 221 VTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGR 280

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +   M+    +  +VT+  L++G C S  V EA + F RM   GL P+V  Y  
Sbjct: 281 IVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNV 340

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G CK + ++ A  LF E+  ++++P+   Y +LIDG  K         L + M + G
Sbjct: 341 LINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRG 400

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
              D+  Y   +    +    ++A  LF +++ +GI PD
Sbjct: 401 QSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPD 438



 Score = 96.7 bits (239), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 117/253 (46%), Gaps = 1/253 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K D+  Y  ++ G C+ +   +++ L + M + GL  + +    L++ Y K   
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDM 350

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  E+    +   + T+  LIDGLCK G +    +    M D G  P++  Y  
Sbjct: 351 VDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNI 410

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            +D  CK    E+A +LF ++  + + PD   Y  +++ + K E  K A      +   G
Sbjct: 411 FLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHG 469

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              ++  YT ++  L +     EA  L  +M      PD +   +++    ER   D+A 
Sbjct: 470 CCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAE 529

Query: 241 ELQNEMMGRGLLS 253
           +L+ EM+ RGL++
Sbjct: 530 KLRLEMIERGLVN 542



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 6/236 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D+  Y  +I G C     +++ +L  E++   L  N     +L+D   K G 
Sbjct: 326 MVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGR 385

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S    L+DEM D      +VT+ + +D  CKS    +AI  F ++   G+ P+  +Y  
Sbjct: 386 MSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDV 444

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++  CK   ++ A      +      P+   YT +I+   K  SF EA+ L ++M +  
Sbjct: 445 IVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDND 504

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
              D   + +++  L       +A  L  EMI RG++ DE   +     H + GN+
Sbjct: 505 CPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLVNDEARLV-----HEQXGNL 555



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 1/224 (0%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           +D+ L  + M          +   L+ A  + G    A+SL  ++    I  ++ T  +L
Sbjct: 37  DDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL 96

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I+  C    +  A    G +   G  PN+  +  LI+G C    + +A     ++  +  
Sbjct: 97  INCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGY 156

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
             D  +Y +LI+G  K+   ++AL L  +M E  V  +L  Y++++ GL +   + +A  
Sbjct: 157 PLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALR 216

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           LF  +  RGIL D +   SL+      G   EA  L   MM RG
Sbjct: 217 LFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLT-MMVRG 259


>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Glycine max]
          Length = 628

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 125/250 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K  +  + ++++G C E K  ++K +L +MK+ G+  + V+   L+  Y +A +  +A  
Sbjct: 232 KPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYD 291

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL EM     E    ++ VLI  LCK   + EA   F  M   G   ++  Y+ LI G C
Sbjct: 292 LLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFC 351

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   I+R   L DEM ++   P+   Y  ++  + K E  +E   L N M ++G   DL+
Sbjct: 352 KWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLS 411

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y +++    + G ++E   L++EM   G+ P     + ++    E+G + EA E   EM
Sbjct: 412 IYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEM 471

Query: 247 MGRGLLSGSK 256
           +GRGL +  +
Sbjct: 472 VGRGLFAAPQ 481



 Score =  106 bits (265), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 1/219 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L EM   G   +  +   L+DA  K G   EA SL +E L  R + +V  F  L+ G C
Sbjct: 188 VLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEE-LRYRWKPSVKHFTSLLYGWC 246

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K G + EA     +M D G+ P++ VY  L+ G  + + +  A +L  EM ++   P+ T
Sbjct: 247 KEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNAT 306

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +YT LI    KHE  +EA  +   M   G   DL  Y++L+ G  + G ++    L  EM
Sbjct: 307 SYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEM 366

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           I +G  P++++   ++  H ++  ++E  EL NEM   G
Sbjct: 367 IQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIG 405



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 97/217 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK   I+ D+ +Y  ++ G     K  D+  LL EM+  G   N    T L+ +  K   
Sbjct: 261 MKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHER 320

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +  EM  +  +  +VT+  LI G CK G ++   +    M   G  PN  +Y  
Sbjct: 321 LEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQH 380

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    KK  +E  + L +EM K    PD + Y  +I    K    KE + L N M   G
Sbjct: 381 IMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSG 440

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +   ++ +  ++ G    G L EA   F EM+GRG+ 
Sbjct: 441 LSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLF 477



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 113/252 (44%), Gaps = 6/252 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    +ADL  Y T+I G C   K +    LL EM + G   N VI   +M A+ K  E
Sbjct: 331 MQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKEE 390

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   L++EM        +  +  +I   CK G V+E +  +  M   GL P++  +  
Sbjct: 391 LEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVI 450

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFKEALNLKNRMT- 177
           +I+G  ++ C+  A   F EM  R +   P       L++  L+ E  + A +  N +T 
Sbjct: 451 MINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDAWNCITA 510

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL---LKKHYERG 234
             G  L+++A+T  +  L   GH++EA      M+ + ++P       L   LKK Y R 
Sbjct: 511 SKGCQLNVSAWTIWIHALFSKGHVKEACSFCIAMMDKDLMPQPDTFAKLMRGLKKLYNRE 570

Query: 235 NMDEAIELQNEM 246
              E  E   +M
Sbjct: 571 FAAEITEKVRKM 582



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 2/186 (1%)

Query: 66  SLLDEMLDSRIE-VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
           +L++EM       +T   F +L+     + +V +A+     MP++G  P+  V+  L+D 
Sbjct: 151 ALIEEMRQENPHLITPQVFVILMRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDA 210

Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
           L K   ++ A +LF+E+  R   P    +T+L+ G+ K     EA ++  +M + G++ D
Sbjct: 211 LRKNGSVKEAASLFEELRYR-WKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPD 269

Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
           +  Y +L+ G ++   + +A  L  EM  +G  P+      L++   +   ++EA  +  
Sbjct: 270 IVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFV 329

Query: 245 EMMGRG 250
           EM   G
Sbjct: 330 EMQRNG 335


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 117/227 (51%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           YG+++ GL    + +++ +L  E K NG+  N VI ++L+D + K G   EA  +++EM+
Sbjct: 518 YGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMM 577

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   V T+  L+DGL K+  + EA+  F  M D    PN   Y  LI+GLCK     
Sbjct: 578 QKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFN 637

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A   + EM K+ + P+T  YTA+I G  K  +  +A +L  R    G   D  +Y +++
Sbjct: 638 KAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMI 697

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
            GLS      +A  LF E   +G       C++LL   ++   +++A
Sbjct: 698 EGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 97/219 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK +    D   Y T+I G C   K   +  LL EMK  G     V   +++D   K   
Sbjct: 471 MKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDR 530

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L +E   + IE+  V +  LIDG  K G V EA      M   GL PNV  +  
Sbjct: 531 LDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNC 590

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DGL K   I  A   F  M      P+   Y  LI+G  K   F +A      M + G
Sbjct: 591 LLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQG 650

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  +   YT+++ GL++ G++ +A  LF      G +PD
Sbjct: 651 LKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPD 689



 Score =  103 bits (256), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 120/254 (47%), Gaps = 5/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    +     Y T+I  L    + +    L ++M+E G   N  + TTL+  + + G 
Sbjct: 52  MRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGR 111

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              ALSLLDEM  +  +  +V + V ID   K G V  A  +F  M   GL P+   YT+
Sbjct: 112 VDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTS 171

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LCK N ++ A  +F++M +   +P   AY  +I GY     F EA +L  R    G
Sbjct: 172 MMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 231

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI--LPDEILCISLLKKHYERGNMDE 238
               + AY  ++  L + G   +A  +F EM    +  LP   + I +L K    GN++ 
Sbjct: 232 CIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKA---GNVEA 288

Query: 239 AIELQNEMMGRGLL 252
           A ++++ M   GL 
Sbjct: 289 AFKVRDAMKEAGLF 302



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 125/313 (39%), Gaps = 70/313 (22%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           +LP Y  II  LC     E +  +   MKE GL  N      ++D   KA +  EA S+ 
Sbjct: 269 NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIF 328

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK- 127
           + M          TFC LIDGL K G V +A   + RM D    PNV VYT+LI    K 
Sbjct: 329 EGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKC 388

Query: 128 ----------------------------KNCI------ERARNLFDEMPKRDMIPDTTAY 153
                                        +C+      E+ R LF+E+  R  +PDT +Y
Sbjct: 389 DRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSY 448

Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT------------------------ 189
           + LI   +K    +E   L   M + G  LD  AY                         
Sbjct: 449 SILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT 508

Query: 190 -----------SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
                      S+V GL++   L EA +LF E    GI  ++++  SL+    + G +DE
Sbjct: 509 MGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDE 568

Query: 239 AIELQNEMMGRGL 251
           A  +  EMM +GL
Sbjct: 569 AYLVMEEMMQKGL 581



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 116/245 (47%), Gaps = 1/245 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G     KF+++  LL   +  G   + V    ++    K G+  +AL + +EM 
Sbjct: 204 YNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMK 263

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +   + T+ ++I  LCK+G V  A      M + GL PNV     +ID LCK   ++
Sbjct: 264 RDAMP-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLD 322

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A ++F+ M  +   PD   + +LIDG  K     +A  +  RM +     ++  YTSL+
Sbjct: 323 EACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLI 382

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
               +C   ++   ++ EM+  G  PD +L  + +   ++ G  ++   L  E+  RG L
Sbjct: 383 RNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFL 442

Query: 253 SGSKN 257
             +++
Sbjct: 443 PDTRS 447



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 100/206 (48%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K   I+ +  +Y ++I G     + +++ L++ EM + GLT N      L+D   KA E 
Sbjct: 542 KSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEI 601

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
           +EAL     M D +     +T+C+LI+GLCK     +A  ++  M   GL PN   YTA+
Sbjct: 602 NEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAM 661

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I GL K   + +A +LF+       IPD+ +Y A+I+G        +A  L       G 
Sbjct: 662 ISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGC 721

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVL 207
            +      +L+  L +   L++A ++
Sbjct: 722 SIHTKTCVALLDALHKAECLEQAAIV 747



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 120/257 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K +    D   Y  +I  L       ++  L   MK+ G   +T    T++D + K+G+
Sbjct: 436 IKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGK 495

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  LL+EM       TVVT+  ++DGL K   + EA   F      G+  N  +Y++
Sbjct: 496 VNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSS 555

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   ++ A  + +EM ++ + P+   +  L+DG +K E   EAL     M ++ 
Sbjct: 556 LIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLK 615

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y  L+ GL +     +A V + EM  +G+ P+ I   +++    + GN+ +A 
Sbjct: 616 CTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQAS 675

Query: 241 ELQNEMMGRGLLSGSKN 257
            L       G +  S +
Sbjct: 676 SLFERFRASGGIPDSAS 692



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 108/243 (44%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           DL L  T +  +    + E  + L  E+K  G   +T   + L+ +  KAG   E   L 
Sbjct: 409 DLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELY 468

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M D    +    +  +IDG CKSG V +A      M   G HP V  Y +++DGL K 
Sbjct: 469 YAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKI 528

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + ++ A  LF+E     +  +   Y++LIDG+ K     EA  +   M + G+  ++  +
Sbjct: 529 DRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTW 588

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+ GL +   + EA V F  M      P++I    L+    +    ++A     EM  
Sbjct: 589 NCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQK 648

Query: 249 RGL 251
           +GL
Sbjct: 649 QGL 651



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 15/245 (6%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  I+  L  + K + +  +  EMK + +  N      ++    KAG    A  + D M 
Sbjct: 239 YNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMK 297

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++ +   V T  ++ID LCK+  + EA   F  M      P+ A + +LIDGL K+  ++
Sbjct: 298 EAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVD 357

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD---LNAYT 189
            A  +++ M   D IP+   YT+LI  + K +  ++   +   M   G   D   LN Y 
Sbjct: 358 DAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYM 417

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLKKHYERGNMDEAIELQNE 245
             V+   + G  ++ R LF E+  RG LPD     IL  SL+K  + R    E  EL   
Sbjct: 418 DCVF---KAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFAR----ETYELYYA 470

Query: 246 MMGRG 250
           M  +G
Sbjct: 471 MKDQG 475



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 115/276 (41%), Gaps = 36/276 (13%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + ++ L  T+I     E + + +  LL EMK N   A+ V+    +D + K G+   A  
Sbjct: 93  EVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWK 152

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF----------------- 109
              EM  + +    VT+  ++  LCK+  + EA++ F +M                    
Sbjct: 153 FFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYG 212

Query: 110 ------------------GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
                             G  P+V  Y  ++  L KK   ++A  +F+EM KRD +P+  
Sbjct: 213 SAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM-KRDAMPNLP 271

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  +I    K  + + A  +++ M E G+  ++     ++  L +   L EA  +F  M
Sbjct: 272 TYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGM 331

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
             +   PD     SL+    ++G +D+A  +   M+
Sbjct: 332 DYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERML 367



 Score = 64.3 bits (155), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 78/181 (43%)

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +L EM  +    T  T   L+    KS  + EA D    M  F   P  + YT LI  L
Sbjct: 12  QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            +    +R   LF++M +     +    T LI  + +      AL+L + M     D D+
Sbjct: 72  SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y   +    + G +  A   FHEM   G++PD++   S++    +   +DEA+E+  +
Sbjct: 132 VLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQ 191

Query: 246 M 246
           M
Sbjct: 192 M 192


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 129/251 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y +II  LC     + +  +L+ M ++G+  + +   +++  +  +G+
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 166

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
           P EA+  L +M    +E  VVT+  L+D LCK+G   EA   F  M   GL P++  Y  
Sbjct: 167 PKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGT 226

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   K  +     L D M +  + P+   ++ L+  Y K E  +EA+ + ++M + G
Sbjct: 227 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 286

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ +   Y +++  L + G +++A + F +MI  G+ PD I+  SL+         ++A 
Sbjct: 287 LNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAE 346

Query: 241 ELQNEMMGRGL 251
           EL  EM+ RG+
Sbjct: 347 ELFLEMLDRGI 357



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 95/185 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K D+  YGT++ G   +    +   LL  M  NG+  N  + + L+ AY K  +
Sbjct: 212 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 271

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  +M    +    VT+  +ID LCKSG V +A+ YF +M D GL P+  VY +
Sbjct: 272 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 331

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC  +  E+A  LF EM  R +   T  + ++ID + K     E+  L + M  +G
Sbjct: 332 LIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIG 391

Query: 181 VDLDL 185
           V  D+
Sbjct: 392 VKPDI 396



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 119/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  D   Y +I+ G C   + +++ + L +M+ +G+  + V   +LMD   K G 
Sbjct: 142 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 201

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA  + D M    ++  + T+  L+ G    G + E       M   G+HPN  V++ 
Sbjct: 202 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 261

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+    K+  +E A  +F +M ++ + P+   Y  +ID   K    ++A+    +M + G
Sbjct: 262 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y SL+  L      ++A  LF EM+ RGI    I   S++  H + G + E+ 
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESG 381

Query: 241 ELQNEMMGRGL 251
           +L + M+  G+
Sbjct: 382 KLFDLMVRIGV 392



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 103/221 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  Y +++  LC   +  +++ +   M + GL  +     TL+  Y   G 
Sbjct: 177 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGA 236

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             E   LLD M+ + I      F +L+    K   V EA+  F +M   GL+PN   Y  
Sbjct: 237 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID LCK   +E A   F++M    + PD+  Y +LI      + +++A  L   M + G
Sbjct: 297 VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           + L    + S++    + G + E+  LF  M+  G+ PD I
Sbjct: 357 ICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDII 397



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 31/219 (14%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG------------ 110
           +A  + DE+L   I   V ++ +L++GLC     +EA++    M D G            
Sbjct: 35  DARHVFDELLRRGIP-DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 111 ------------------LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTA 152
                             + PNV  Y ++I  LCK   +++A  +   M K  ++PD   
Sbjct: 94  VINGFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMT 153

Query: 153 YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
           Y +++ G+      KEA+    +M   GV+ D+  Y SL+  L + G   EAR +F  M 
Sbjct: 154 YNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMT 213

Query: 213 GRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            RG+ PD     +LL+ +  +G + E   L + M+  G+
Sbjct: 214 KRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 252



 Score = 54.7 bits (130), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 21/260 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + ++ D  +Y ++I  LCI  K+E ++ L  EM + G+  +T+   +++D++ K G 
Sbjct: 317 MIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGR 376

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY-FGRMPDFGLH------- 112
             E+  L D M+   ++  ++T    +    +   +   I + F  M + G         
Sbjct: 377 VIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVN 436

Query: 113 -------------PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
                        P +  Y  ++ GLCK    + A  +F  +   D+  +   +  +ID 
Sbjct: 437 TNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 496

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            LK     EA +L    +  G+  +   Y  +   +   G L+E   LF  M   G   D
Sbjct: 497 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 556

Query: 220 EILCISLLKKHYERGNMDEA 239
             +   ++++  +RG +  A
Sbjct: 557 SGMLNFIVRELLQRGEITRA 576



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 10/123 (8%)

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL--DLNAYT 189
           E AR++FDE+ +R  IPD  +Y  L++G       +EAL L + M + G D   D+ +Y+
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           +++ G  + G L        +M+ + I P+ +   S++    +   +D+A+E+   M+  
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 250 GLL 252
           G++
Sbjct: 146 GVM 148



 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 7/148 (4%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           + L L+D  L++R      TF ++ID L K G   EA D F      GL PN   Y  + 
Sbjct: 476 QNLCLMDLKLEAR------TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 529

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           + +  +  +E    LF  M       D+     ++   L+      A    + + E    
Sbjct: 530 ENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS 589

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHE 210
           L+ +   SL   L   G  QE  +   E
Sbjct: 590 LEAST-ASLFIDLLSGGKYQEYHIFLPE 616


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 135/253 (53%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +I+AD+  Y  +I  LC   +   + LLL  M+++ LT +     TL++ +F  G+
Sbjct: 215 MERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGK 274

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  + + ML   +  +V T+  +IDG C++  + +A+     M   G+ P+   Y+A
Sbjct: 275 INHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSA 334

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK + +  A +L  ++  R +  + T  T LIDG+ +     +A  +   M E G
Sbjct: 335 LLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDG 394

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D D+  Y++L+ G+ R   + E + +   M   GILP+++L  +L+  + + G +  A+
Sbjct: 395 IDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVAL 454

Query: 241 ELQNEMMGRGLLS 253
           +   ++  RGL++
Sbjct: 455 KHFVDIYRRGLVA 467



 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 122/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  ++  D   Y T+I G   E K   ++ + + M    L  +    TT++D Y +   
Sbjct: 250 MRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRR 309

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +ALS+L EM  + +  + +T+  L++G CK  ++  A+D    +   G+  N  + T 
Sbjct: 310 IDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTI 369

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C+   I +A+ +   M +  + PD   Y+ALI+G  +     E   + +RM + G
Sbjct: 370 LIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSG 429

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   YT+L+    + G+++ A   F ++  RG++ + ++  +LL+  Y  G + EA 
Sbjct: 430 ILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAE 489

Query: 241 ELQNEM 246
             +  M
Sbjct: 490 HFRQYM 495



 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 115/227 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ G C  S    +  L+ ++K  G+T N  +CT L+D + + GE S+A  +L  ML
Sbjct: 332 YSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSML 391

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  I+  VVT+  LI+G+C+   + E  +   RM   G+ PN  +YT LI   CK   ++
Sbjct: 392 EDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVK 451

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A   F ++ +R ++ +   + AL+  + +     EA + +  M+ + +  +  ++  ++
Sbjct: 452 VALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCII 511

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
                 G + EA  ++ +M+  G  P+     +LL+   + G++ +A
Sbjct: 512 DSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQA 558



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 1/249 (0%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            +    D+     ++  LC   +F  ++ +L +MK   L+ N+    T++  Y K G   
Sbjct: 148 ARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCLS-NSATYNTILHWYVKKGRFK 206

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            AL +L++M    I+  + T+ ++ID LC+      A     RM    L P+   Y  LI
Sbjct: 207 AALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLI 266

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +G   +  I  AR +F+ M ++ ++P    YT +IDGY ++    +AL++ + M   GV 
Sbjct: 267 NGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVM 326

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
                Y++L+ G  +   L  A  L  ++  RGI  ++ +C  L+    + G + +A ++
Sbjct: 327 PSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQI 386

Query: 243 QNEMMGRGL 251
              M+  G+
Sbjct: 387 LKSMLEDGI 395



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 122/245 (49%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           AD   Y +++ G          K ++S+M +N +  N+     LM  Y K G+ S++L L
Sbjct: 678 ADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYL 737

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
              M+   I    VT+ +LI GL + GL+  A+ +  +M   G+ P+  V+  LI    +
Sbjct: 738 YKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSE 797

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           K+ +  A  LF+ M    + P +  ++A+I+G ++     ++  + + M +VG+  +   
Sbjct: 798 KSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTH 857

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y +LV    R G +  A  L  EM   GI+P E+   S+++     G ++EA+ + + MM
Sbjct: 858 YIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMM 917

Query: 248 GRGLL 252
             G++
Sbjct: 918 RSGMV 922



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 120/279 (43%), Gaps = 35/279 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG------ 59
           I  D+  Y  +I G+C  +K  ++K +LS M+++G+  N V+ TTL+  Y KAG      
Sbjct: 395 IDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVAL 454

Query: 60  -------------EP----------------SEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
                         P                +EA      M    I    V+F  +ID  
Sbjct: 455 KHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSY 514

Query: 91  CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
           C  G + EA   +  M  +G  PNV  Y  L+ GLC+   + +A+     +       D 
Sbjct: 515 CHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDE 574

Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
             + AL+ G  K+ +  EAL++  +M +     D++ YT L+ G  R G +  A V+   
Sbjct: 575 KTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQM 634

Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
           M+ +G++PD +    LL      G +  A  +  E++ +
Sbjct: 635 MLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICK 673



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 1/251 (0%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
            D   +  ++ G+C     +++  +  +M +N    +    T L+  + + G+   AL +
Sbjct: 572 VDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVM 631

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYTALIDGLC 126
           L  ML+  +    V +  L++GL   G V+ A   F  +    GL+ +   Y +L++G  
Sbjct: 632 LQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYL 691

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +   + +  +M + ++ P++ +Y  L+ GY+K   F ++L L   M   G+  D  
Sbjct: 692 KGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNV 751

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            Y  L+ GLS CG +  A     +M+  GI PD+++   L+    E+  M  A+ L N M
Sbjct: 752 TYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCM 811

Query: 247 MGRGLLSGSKN 257
               L   SK 
Sbjct: 812 KCLHLSPSSKT 822



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 115/252 (45%)

Query: 6    IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            I  D  ++  +I     +SK  ++  L + MK   L+ ++   + +++   +     ++ 
Sbjct: 781  IFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSH 840

Query: 66   SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             +L EML   ++     +  L++  C+ G +  A      M   G+ P     +++I GL
Sbjct: 841  EVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGL 900

Query: 126  CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            C+   +E A  +F  M +  M+P    +T L+    K     +AL+LK  M    + +D+
Sbjct: 901  CRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDV 960

Query: 186  NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +Y  L+ GL +  H+ +A  L+ EM  +G+ P+    I+L    Y  G M    EL  +
Sbjct: 961  VSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLED 1020

Query: 246  MMGRGLLSGSKN 257
            +  RGL+   K 
Sbjct: 1021 IEERGLIPAFKQ 1032



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%)

Query: 1    MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            MK  ++      +  +I GL  ++  + S  +L EM + GL  N      L++A  + GE
Sbjct: 811  MKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGE 870

Query: 61   PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
               A  L +EM    I    V    +I GLC+ G + EA+  F  M   G+ P VA +T 
Sbjct: 871  IDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTT 930

Query: 121  LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            L+  LCK++ I  A +L   M    +  D  +Y  LI G  K +   +AL+L   M   G
Sbjct: 931  LMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKG 990

Query: 181  VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
            +  ++  Y +L   +   G +Q    L  ++  RG++P
Sbjct: 991  LWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M   NI  +   +  II   C   K  ++  +  +M   G + N      L+    + G 
Sbjct: 495 MSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGH 554

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A   +  +LD    V   TF  L+ G+CK G + EA+D   +M      P++  YT 
Sbjct: 555 LVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTI 614

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA-LNLKNRMTEV 179
           L+ G C+K  I  A  +   M ++ ++PDT AYT L++G +     K A    +  + + 
Sbjct: 615 LLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 674

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  D  AY SL+ G  + G++   + +  +M    + P+      L+  + +RG   ++
Sbjct: 675 GLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKS 734

Query: 240 IELQNEMMGRGL 251
           + L   M+ +G+
Sbjct: 735 LYLYKYMVRKGI 746



 Score = 76.6 bits (187), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 1/230 (0%)

Query: 23  ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
           E K  D+ + +  M + G  A+ V C +++ A  + GE       L E L  +  + V T
Sbjct: 98  ERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTT 157

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
             +L++ LC +G  R+A D   +M    L  N A Y  ++    KK   + A  + ++M 
Sbjct: 158 CNILLNSLCTNGEFRKAEDMLQKMKSCCL-SNSATYNTILHWYVKKGRFKAALCVLEDME 216

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
           +  +  D   Y  +ID   + +    A  L  RM +  +  D   Y +L+ G    G + 
Sbjct: 217 RDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKIN 276

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            AR +F+ M+ + ++P      +++  +     +D+A+ + +EM   G++
Sbjct: 277 HARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVM 326


>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 4/225 (1%)

Query: 26  FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR-IEVTVVTFC 84
           F++S  +   MKE G++ + V   +L+    K G  S A  L DEMLD+  +     TF 
Sbjct: 181 FQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFN 240

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI G C + +V E   +F  M  F   P+V  Y  L+DGLC+   ++ A N+   M K+
Sbjct: 241 ILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKK 300

Query: 145 --DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
             ++ P+   YT LI GY   +   EAL+L   M   G+  +   Y +L+ GL     L 
Sbjct: 301 SPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLD 360

Query: 203 EARVLFHEMIGR-GILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           + + +   M+G  G +PD     +L+K H   G ++EA  +  +M
Sbjct: 361 KIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKM 405



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 10/255 (3%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D   +  +I G C+ S  ++      EM       + V   TL+D   +AG+   A 
Sbjct: 232 VTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAH 291

Query: 66  SLLDEML--DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           +++  M+     +   VVT+  LI G C    + EA+     M   GL PN   Y  LI 
Sbjct: 292 NVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQ 351

Query: 124 GLCKKNCIERARNLFDEMP-KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           GLC+   +++ + + + M      IPDT     LI  +      +EA ++  +M+E+ V 
Sbjct: 352 GLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQ 411

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY-------ERGN 235
            D   Y+ LV  L + G  + A   F E+  + IL  ++ C  L+  +          G 
Sbjct: 412 PDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGK 471

Query: 236 MDEAIELQNEMMGRG 250
             +A  +  ++M RG
Sbjct: 472 TKKAERVFRQLMKRG 486



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 9/257 (3%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
           M  + +K +   Y T+I GLC   K +  K +L  M  + G   +T    TL+ A+   G
Sbjct: 334 MVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMG 393

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-------DFGLH 112
           +  EA S+ ++M + R++    T+ VL+  LC+ G  R A ++F  +        D G  
Sbjct: 394 KLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCK 453

Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           P VA Y  + + LC     ++A  +F ++ KR    D  +Y  LI G+ +  + +   +L
Sbjct: 454 PLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDL 512

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
              M       D   Y  ++ GL + G    A     +M+    LP   +  S+L    E
Sbjct: 513 LVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVE 572

Query: 233 RGNMDEAIELQNEMMGR 249
           +G   E+  L   M+ R
Sbjct: 573 KGCAHESASLVKLMLER 589



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 3/204 (1%)

Query: 50  TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD- 108
           +L+ +Y  AG   E++ +   M +  +  +VVTF  L+  + K G    A   F  M D 
Sbjct: 170 SLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 229

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
           +G+ P+   +  LI G C  + ++     F EM +    PD   Y  L+DG  +    K 
Sbjct: 230 YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKI 289

Query: 169 ALNLKNRMTEVGVDLDLN--AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
           A N+   M +   +L  N   YT+L+ G      + EA  L  EM+ RG+ P++I   +L
Sbjct: 290 AHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTL 349

Query: 227 LKKHYERGNMDEAIELQNEMMGRG 250
           ++   E   +D+  E+   M+G G
Sbjct: 350 IQGLCEAQKLDKIKEILEGMVGDG 373



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 9/226 (3%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K  N+  ++  Y T+I G C++    ++  LL+EM   GL  N +   TL+    +A + 
Sbjct: 300 KSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKL 359

Query: 62  SEALSLLDEML-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +   +L+ M+ D        T   LI   C  G + EA   F +M +  + P+ A Y+ 
Sbjct: 360 DKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSV 419

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-------PDTTAYTALIDGYLKHESFKEALNLK 173
           L+  LC++    RA   FDE+ +++++       P   AY  + +    +   K+A  + 
Sbjct: 420 LVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVF 479

Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
            ++ + G   D  +Y +L+ G  R G  +    L   M+ R  +PD
Sbjct: 480 RQLMKRGTQ-DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPD 524



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 3/172 (1%)

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM- 141
           F  LI     +GL +E+I  F  M + G+ P+V  + +L+  + K+     A+ LFDEM 
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
               + PDT  +  LI G+  +    E       M+    D D+  Y +LV GL R G +
Sbjct: 228 DTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKV 287

Query: 202 QEARVLFHEMIGRG--ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + A  +   M+ +   + P+ +   +L++ +  + +M EA+ L  EM+ RGL
Sbjct: 288 KIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGL 339



 Score = 42.0 bits (97), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 96/239 (40%), Gaps = 5/239 (2%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D P Y T+I G C E   E    LL  M       +      ++D   K G+P  A   L
Sbjct: 489 DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSL 548

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           ++ML S    T   F  ++  L + G   E+      M +  +  N+ + T  +  L K 
Sbjct: 549 EKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKS 608

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
              ++A      + +   +        L+    +     EA  +     E    +D++  
Sbjct: 609 GLQDKAFMTIGLLYENGYL---VKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMC 665

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE-RGNMDEAIELQNEM 246
           ++++ GL +   + EA  L++E++ +G +   + C   L+   E  G ++EA  +  +M
Sbjct: 666 STVISGLCKAHKVSEAFALYYELVEKG-MQHRLTCQEDLRISLEAEGRLNEAKFVSKKM 723



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 12/213 (5%)

Query: 40  GLTANTVICTTLMDAYFKAGEP--SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
           GL A T    +   A     EP   E  S L E+  S  + TV+    LI    K     
Sbjct: 56  GLKAATKTKRSQAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAK----- 110

Query: 98  EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD---MIPDTTAYT 154
            A+ +F  +   G   N   Y  +I+ L +   +  ARN    + K+    +      + 
Sbjct: 111 -ALHFFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFN 169

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
           +LI  Y     F+E++ +   M E+GV   +  + SL+  + + G    A+ LF EM+  
Sbjct: 170 SLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 229

Query: 215 -GILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            G+ PD      L++       +DE      EM
Sbjct: 230 YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEM 262


>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 418

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 110/221 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++ D+  +  +I GLC ESK +D+  L  EM +NGL  N V  TTL+D + K G 
Sbjct: 197 MQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGR 256

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++  D    M   GL P+   YT 
Sbjct: 257 VDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTT 316

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M K ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  ++  YT ++    + G +     L  EM   G  P+ +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXV 417



 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 115/219 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L S M+ +G+  +    + L++   K  +  +A  L DEMLB+ +    VTF  LIDG C
Sbjct: 193 LKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHC 252

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++  +L DEM  + + PD  
Sbjct: 253 KNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKI 312

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL + G   +A  +  EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREM 372

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           +  G+ P+      ++ +  ++G++    +L  EM   G
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXG 411



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 118/235 (50%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG   ES             E G  A+      LM  + K GE   A S+ D + 
Sbjct: 116 YFKLVWGFYEESL------------ECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSIT 163

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  K G + E       M   G+ P+V  ++ LI+GLCK++ ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMD 223

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM    ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 224 DANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLI 283

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++   L  EM  +G+ PD+I   +L+  + + G+++ A E +  M+
Sbjct: 284 YGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 104/210 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +I+ L K    +    +
Sbjct: 64  SDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGF 123

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +    + G   ++  +  L+   CK+  I  A+++FD + K  + P   ++  L++GY+K
Sbjct: 124 YEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIK 183

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   GV  D+  ++ L+ GL +   + +A  LF EM+  G++P+ + 
Sbjct: 184 IGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVT 243

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             +L+  H + G +D A+E+  +M+ + LL
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYRQMLSQSLL 273


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 122/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G     ++ +Y T+I GLC      ++  +   M++ G+ A+ V   TL+     +G 
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++A  LL +M+  +I+  V+ F  LID   K G + EA + +  M    + PNV  Y +
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+G C   C+  A+ +FD M  +   PD   Y  LI G+ K +  ++ + L   MT  G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y +L+ G  + G L  A+ +F+ M+  G+ PD +    LL      G +++A+
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414

Query: 241 ELQNEM 246
            +  ++
Sbjct: 415 VMVEDL 420



 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 109/231 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +++  ++  Y ++I G CI     D+K +   M   G   + V   TL+  + K+  
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             + + L  EM    +     T+  LI G C++G +  A   F RM D G+ P++  Y  
Sbjct: 340 VEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNI 399

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D LC    IE+A  + +++ K +M  D   Y  +I G  + +  KEA  L   +T  G
Sbjct: 400 LLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKG 459

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHY 231
           V  D  AY +++ GL R G  +EA  L   M   G +P E +    L+ HY
Sbjct: 460 VKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHY 510



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 119/238 (50%)

Query: 14  GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           G+++ G C  ++F+++  L+  M   G   N VI  T+++   K  + + AL +   M  
Sbjct: 153 GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK 212

Query: 74  SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
             I    VT+  LI GL  SG   +A      M    + PNV  +TALID   K+  +  
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272

Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
           ARNL+ EM +R ++P+   Y +LI+G+  H    +A  + + M   G   D+  Y +L+ 
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 332

Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           G  +   +++   LF EM  +G++ D     +L+  + + G ++ A ++ N M+  G+
Sbjct: 333 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390



 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 125/291 (42%), Gaps = 35/291 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K I+AD   Y T+I GL    ++ D+  LL +M +  +  N +  T L+D + K G 
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269

Query: 61  PSEALSLLDEMLDSRIEVTVVT-------FCV---------------------------- 85
             EA +L  EM+   +   V T       FC+                            
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G CKS  V + +  F  M   GL  +   Y  LI G C+   +  A+ +F+ M    
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
           + PD   Y  L+D    +   ++AL +   + +  +D+D+  Y  ++ GL R   L+EA 
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
            LF  +  +G+ PD I  I+++     +G   EA +L   M   G +   +
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSER 500



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 121/252 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  DL  +  +I   C  S+   +  LL +M + G   + V   +L++ + +   
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNR 164

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+SL+D M        VV +  +I+GLCK+  +  A++ F  M   G+  +   Y  
Sbjct: 165 FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNT 224

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI GL        A  L  +M KR + P+   +TALID ++K  +  EA NL   M    
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  ++  Y SL+ G    G L +A+ +F  M+ +G  PD +   +L+    +   +++ +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344

Query: 241 ELQNEMMGRGLL 252
           +L  EM  +GL+
Sbjct: 345 KLFCEMTYQGLV 356



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 108/228 (47%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           KF+D+  L  EM ++    + V  T ++    K  +    + L  +M +  I   + +F 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +LI   C+   +  A+   G+M   G  P++    +L++G C+ N  + A +L D M   
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
             +P+   Y  +I+G  K+     AL +   M + G+  D   Y +L+ GLS  G   +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             L  +M+ R I P+ I   +L+    + GN+ EA  L  EM+ R ++
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 286



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 113/227 (49%)

Query: 24  SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
           +KF+    L  +M+  G++ +    T L+  + +    S AL+LL +M+      ++VT 
Sbjct: 93  NKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTL 152

Query: 84  CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
             L++G C+    +EA+     M  FG  PNV +Y  +I+GLCK   +  A  +F  M K
Sbjct: 153 GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK 212

Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
           + +  D   Y  LI G      + +A  L   M +  +D ++  +T+L+    + G+L E
Sbjct: 213 KGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE 272

Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
           AR L+ EMI R ++P+     SL+      G + +A  + + M+ +G
Sbjct: 273 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319


>gi|91806015|gb|ABE65736.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 360

 Score =  117 bits (294), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 125/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  +L  Y   I   C  S+   +  +L +M + G   + V   +L++ +     
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 160

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA++L+D+M++   +   VTF  L+ GL +     EA+    RM   G  P++  Y A
Sbjct: 161 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 220

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+GLCK+   + A NL ++M K  +  D   Y  +IDG  K++   +A +L N+M   G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D+  Y  L+  L   G   +A  L  +M+ + I PD +   +L+    + G + EA 
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340

Query: 241 ELQNEMMGRGL 251
           +L +EM+ R +
Sbjct: 341 KLYDEMVKRSI 351



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 112/210 (53%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +++ G C  ++  ++  L+ +M E G   +TV  TTL+   F+  + SEA++L++ M+  
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
             +  +VT+  +I+GLCK G    A++   +M    +  +V +Y  +IDGLCK   ++ A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            +LF++M  + + PD   Y  LI     +  + +A  L + M E  ++ DL  + +L+  
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             + G L EA  L+ EM+ R I P  +  I
Sbjct: 330 FVKEGKLVEAEKLYDEMVKRSIDPSFVCTI 359



 Score = 94.4 bits (233), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 117/239 (48%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +  ++  +   +KF+    L  +M+  G++ N    +  ++ + +  + S AL++L +M+
Sbjct: 78  FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMM 137

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                 ++VT   L++G C    + EA+    +M + G  P+   +T L+ GL + N   
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L + M  +   PD   Y A+I+G  K      ALNL N+M +  ++ D+  Y +++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL +  H+ +A  LF++M  +GI PD      L+      G   +A  L ++M+ + +
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316



 Score = 94.0 bits (232), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 89/176 (50%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           + D   + T++ GL   +K  ++  L+  M   G   + V    +++   K GEP  AL+
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL++M   +IE  VV +  +IDGLCK   + +A D F +M   G+ P+V  Y  LI  LC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
                  A  L  +M ++++ PD   + ALID ++K     EA  L + M +  +D
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKRSID 352



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 110/227 (48%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           K +D+  L  +M ++    + V  + L+ A  K  +    +SL ++M +  I   + T+ 
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           + I+  C+   +  A+   G+M   G  P++    +L++G C  N I  A  L D+M + 
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
              PDT  +T L+ G  +H    EA+ L  RM   G   DL  Y +++ GL + G    A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             L ++M    I  D ++  +++    +  +MD+A +L N+M  +G+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281



 Score = 72.0 bits (175), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 75/148 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K  + DL  YG +I GLC   + + +  LL++M++  + A+ VI  T++D   K   
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L ++M    I+  V T+  LI  LC  G   +A      M +  ++P++  + A
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIP 148
           LID   K+  +  A  L+DEM KR + P
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKRSIDP 353



 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 1/113 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KGK I+AD+ +Y TII GLC     +D+  L ++M+  G+  +      L+      G  
Sbjct: 243 KGK-IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
           S+A  LL +ML+  I   +V F  LID   K G + EA   +  M    + P+
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 354



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 2/87 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K IK D+  Y  +I  LC   ++ D+  LLS+M E  +  + V    L+DA+ K G+
Sbjct: 276 METKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGK 335

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLI 87
             EA  L DEM+   I+ + V  C ++
Sbjct: 336 LVEAEKLYDEMVKRSIDPSFV--CTIV 360


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  DL  Y +++  LC     + ++  L +M    +  N      L+  Y   G+
Sbjct: 248 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 307

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM    I   VVT  +L+  LCK G ++EA D F  M   G +P+V  Y  
Sbjct: 308 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 367

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G   K C+    +LFD M    + PD   +  LI  Y       +A+ + N M + G
Sbjct: 368 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 427

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D+  Y +++  L R G + +A   F++MI +G+ PD+     L++     G++ +A 
Sbjct: 428 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 487

Query: 241 ELQNEMMGRGL 251
           EL +E+M  G+
Sbjct: 488 ELISEIMNNGM 498



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 121/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K D+  Y T+I  LC   K +D+    ++M + G+  +      L+  +   G 
Sbjct: 423 MRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGS 482

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ E++++ + + +V F  +I+ LCK G V +A + F    + GLHP+  VY  
Sbjct: 483 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 542

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C    +E+A  +FD M    + P+   Y  L++GY K     E L+L   M + G
Sbjct: 543 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRG 602

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y+ ++ GL   G    A++ FHEM   GI  D      +L+  ++    DEAI
Sbjct: 603 IKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAI 662

Query: 241 ELQNEM 246
            L  E+
Sbjct: 663 FLFKEL 668



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 118/239 (49%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G   E     +  L  EM + G+  + V   +++ A  KA    +A + L +M+
Sbjct: 225 YNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMV 284

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           + R+     T+  LI G   +G  +EA+  F  M    + P+V   + L+  LCK   I+
Sbjct: 285 NKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK 344

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            AR++FD M  +   PD  +Y  +++GY       +  +L + M   G+  D   +  L+
Sbjct: 345 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLI 404

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
              + CG L +A ++F+EM   G+ PD +   +++      G MD+A+E  N+M+ +G+
Sbjct: 405 KAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 463



 Score =  107 bits (268), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 122/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D   +  +I         + + ++ +EM+++G+  + V   T++ A  + G+
Sbjct: 388 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 447

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+   ++M+D  +      +  LI G C  G + +A +    + + G+H ++  +++
Sbjct: 448 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 507

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LCK   +  A+N+FD      + PD   Y  L+DGY      ++AL + + M   G
Sbjct: 508 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 567

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y +LV G  + G + E   LF EM+ RGI P  IL   ++   +E G    A 
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627

Query: 241 ELQNEMMGRGL 251
              +EM   G+
Sbjct: 628 MKFHEMTESGI 638



 Score =  102 bits (254), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 118/242 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  +I G C       +K L+SE+  NG+  + V  +++++   K G 
Sbjct: 458 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGR 517

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A ++ D  ++  +    V + +L+DG C  G + +A+  F  M   G+ PNV  Y  
Sbjct: 518 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 577

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK   I+   +LF EM +R + P T  Y+ +IDG  +      A    + MTE G
Sbjct: 578 LVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESG 637

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + +D+  Y  ++ GL +     EA  LF E+    +  + I   +++   ++   ++EA 
Sbjct: 638 IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAK 697

Query: 241 EL 242
           +L
Sbjct: 698 DL 699



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 122/251 (48%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG+N   D+  Y  ++ G   +    D   L   M  +G+  +      L+ AY   G 
Sbjct: 355 MKGQN--PDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 412

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + +EM D  ++  VVT+  +I  LC+ G + +A++ F +M D G+ P+   Y  
Sbjct: 413 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNC 472

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    + +A+ L  E+    M  D   ++++I+   K     +A N+ +    VG
Sbjct: 473 LIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 532

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  L+ G    G +++A  +F  M+  GI P+ +   +L+  + + G +DE +
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 592

Query: 241 ELQNEMMGRGL 251
            L  EM+ RG+
Sbjct: 593 SLFREMLQRGI 603



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 120/251 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  +I  D+     ++  LC   K ++++ +   M   G   +      +++ Y   G 
Sbjct: 318 MRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGC 377

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L D ML   I     TF VLI      G++ +A+  F  M D G+ P+V  Y  
Sbjct: 378 LVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRT 437

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LC+   ++ A   F++M  + + PD  AY  LI G+  H S  +A  L + +   G
Sbjct: 438 VIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNG 497

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD+  ++S++  L + G + +A+ +F   +  G+ PD ++   L+  +   G M++A+
Sbjct: 498 MHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 557

Query: 241 ELQNEMMGRGL 251
            + + M+  G+
Sbjct: 558 RVFDAMVSAGI 568



 Score =  100 bits (248), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 120/248 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + +II  LC   +  D++ +       GL  + V+   LMD Y   G+  +AL + 
Sbjct: 501 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 560

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           D M+ + IE  VV +  L++G CK G + E +  F  M   G+ P+  +Y+ +IDGL + 
Sbjct: 561 DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEA 620

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A+  F EM +  +  D   Y  ++ G  K+  F EA+ L   +  + V +++   
Sbjct: 621 GRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITL 680

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ G+ +   ++EA+ LF  +    ++P  +    ++    + G ++EA ++ + M  
Sbjct: 681 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 740

Query: 249 RGLLSGSK 256
            G    S+
Sbjct: 741 AGCEPNSR 748



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 3/205 (1%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-GRMPDF 109
           LMD   +A  P  AL+   ++L + + V ++    L++G C++    EA+D    R P+ 
Sbjct: 120 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 179

Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFK 167
           G  P+V  Y+ L+  LC +    +A +L   M +   +  P+  AY  +IDG+ K     
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           +A +L   M + G+  DL  Y S+V  L +   + +A     +M+ + +LP+     +L+
Sbjct: 240 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLI 299

Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
             +   G   EA+ +  EM    +L
Sbjct: 300 YGYSSTGQWKEAVRVFKEMRRHSIL 324



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 102/217 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D  +Y  ++ G C+  K E +  +   M   G+  N V   TL++ Y K G   E L
Sbjct: 533 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 592

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  EML   I+ + + + ++IDGL ++G    A   F  M + G+  ++  Y  ++ GL
Sbjct: 593 SLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGL 652

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K  C + A  LF E+   ++  +      +IDG  +    +EA +L   ++   +   +
Sbjct: 653 FKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSV 712

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             Y+ ++  L + G ++EA  +F  M   G  P+  L
Sbjct: 713 VTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 749



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 110/242 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ ++  YGT++ G C   + ++   L  EM + G+  +T++ + ++D  F+AG 
Sbjct: 563 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM +S I + + T+ +++ GL K+    EAI  F  +    +  N+     
Sbjct: 623 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 682

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG+ +   +E A++LF  + +  ++P    Y+ +I   +K    +EA ++ + M   G
Sbjct: 683 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + +      +V  L +   +  A     ++  R    + +  + L+     +G   E I
Sbjct: 743 CEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQI 802

Query: 241 EL 242
             
Sbjct: 803 RF 804



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 3/180 (1%)

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN-L 137
           T  T+ +L+D   ++     A+ +FG++   GL  N+ +   L++G C+    + A + L
Sbjct: 113 TSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDIL 172

Query: 138 FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN--AYTSLVWGL 195
               P+   +PD  +Y+ L+          +A +L   M E G     N  AY +++ G 
Sbjct: 173 LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 232

Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
            + G + +A  LF EM+ RGI PD +   S++    +   MD+A     +M+ + +L  +
Sbjct: 233 FKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNN 292



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 17/208 (8%)

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGL--------CKSGLVREAIDYFGRMPDFG- 110
            P EA  LLDE+      V        +  L        C+SG    A+  F R      
Sbjct: 47  RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPAL-AVALFNRAASRAQ 105

Query: 111 ----LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
               L P    Y  L+D   + +  E A   F ++ +  +  +      L++G+ + +  
Sbjct: 106 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRT 165

Query: 167 KEALN-LKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL--PDEILC 223
            EAL+ L +R  E+G   D+ +Y+ L+  L   G   +A  L   M   G +  P+ +  
Sbjct: 166 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 225

Query: 224 ISLLKKHYERGNMDEAIELQNEMMGRGL 251
            +++   ++ G++++A +L  EM+ RG+
Sbjct: 226 NTVIDGFFKEGDVNKACDLFKEMVQRGI 253


>gi|222637475|gb|EEE67607.1| hypothetical protein OsJ_25160 [Oryza sativa Japonica Group]
          Length = 225

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 102/194 (52%)

Query: 19  GLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEV 78
            LC +   + +  LL  M+  G+ A+ V   TL+     A E  +A+ L+ EM +S IE 
Sbjct: 3   ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP 62

Query: 79  TVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLF 138
            VV +  L+ G CKSG   +    F  M + G+ P+V +YT LID LCK    ++A  + 
Sbjct: 63  NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 122

Query: 139 DEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
           D M +R + P+   Y  LI+   K  S KEA+ +  +M+E GV  D+  Y +L+ GLS  
Sbjct: 123 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDV 182

Query: 199 GHLQEARVLFHEMI 212
             + EA  L  EM+
Sbjct: 183 LEMDEAMWLLEEMV 196



 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 92/177 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   ++AD+  YGT+I GLC  ++ + +  L+ EM E+G+  N V+ ++L+  Y K+G 
Sbjct: 20  MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGR 79

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   +  EM +  IE  VV +  LID LCK G  ++A      M   GL PNV  Y  
Sbjct: 80  WEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNV 139

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
           LI+ +CK+  ++ A  +  +M ++ + PD   Y  LI G        EA+ L   M 
Sbjct: 140 LINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 196



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 104/195 (53%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A+ LL  M  + +   VVT+  LI GLC +  V +A++  G M + G+ PNV VY++L+
Sbjct: 12  QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 71

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G CK    E    +F EM ++ + PD   YT LID   K    K+A  + + M   G++
Sbjct: 72  QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 131

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            ++  Y  L+  + + G ++EA  +  +M  +G+ PD +   +L+K   +   MDEA+ L
Sbjct: 132 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 191

Query: 243 QNEMMGRGLLSGSKN 257
             EM+   ++  S+ 
Sbjct: 192 LEEMVRGYIIQSSQQ 206



 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 82/163 (50%)

Query: 89  GLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
            LC   L  +A+     M   G+  +V  Y  LI GLC    +++A  L  EM +  + P
Sbjct: 3   ALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEP 62

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           +   Y++L+ GY K   +++   +   M+E G++ D+  YT L+  L + G  ++A  + 
Sbjct: 63  NVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVM 122

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
             M+ RG+ P+ +    L+    + G++ EAI +  +M  +G+
Sbjct: 123 DMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGV 165


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 113/227 (49%), Gaps = 3/227 (1%)

Query: 25  KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
           + ED+ L      +N    + V   TLM+ +FKAG+  +AL+L  EM DS I V + +  
Sbjct: 117 RVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAV-LRSHN 175

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
           +++ GLC  G +  A + F  M      PN+  YT +IDGLCK   +++A  LF +M  +
Sbjct: 176 IVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDK 234

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            + PD   Y ALIDG  K    KEA +L       G    +  Y +++ GL +CG ++ A
Sbjct: 235 AIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENA 294

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDE-AIELQNEMMGRG 250
             L+ +M+    L  ++   S L       N  E A EL  EM+  G
Sbjct: 295 LTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTG 341



 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 127/252 (50%), Gaps = 3/252 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  D+  YG +I GL  + + +++  L  E +  G     V   T++D   K G 
Sbjct: 231 MVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGR 290

Query: 61  PSEALSLLDEML-DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
              AL+L D+M+ +  ++  + T+  LI+GL  S    +A + +  M D G  P+V  Y 
Sbjct: 291 IENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYN 350

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
            L+DGLCK  C ++A  +F +M   ++  P+   YT LID + K +   +A+ L   M  
Sbjct: 351 TLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEG 410

Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
             +  D   +T+++  L +   + EA  LF E IG+   PD +L  ++L  + +   +D+
Sbjct: 411 RSLLPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCKPDSVLFNTMLAGYCKITRIDD 469

Query: 239 AIELQNEMMGRG 250
           A +L + M+  G
Sbjct: 470 AKKLHDRMLDSG 481



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 115/223 (51%), Gaps = 2/223 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++  ++K D+  Y  +I GL + ++ E +  L  EM + G + + V   TL+D   K+G 
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGC 361

Query: 61  PSEALSLLDEM-LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
             +A+ +  +M + +  +  V+T+ VLID  CK   + +A+     M    L P+   +T
Sbjct: 362 EDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFT 421

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            +I  LCK++ I+ A  LF+ + K    PD+  +  ++ GY K     +A  L +RM + 
Sbjct: 422 TVIQKLCKESRIDEAHELFESIGK-TCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDS 480

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
           G    L  YT+LV G  R G   +A +++HEMI  G  P+  L
Sbjct: 481 GCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHL 523



 Score =  103 bits (258), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 2/232 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  +I GLC   K + +  L  +M +  +  + V    L+D   K     EA  L +E  
Sbjct: 208 YTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEAR 267

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYTALIDGLCKKNCI 131
                 TVVT+  +IDGLCK G +  A+  +  M  +  L P++  Y+ALI+GL   N  
Sbjct: 268 AKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRG 327

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV-DLDLNAYTS 190
           E+A  L++EM      PD   Y  L+DG  K     +A+ +  +M    V D ++  YT 
Sbjct: 328 EKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTV 387

Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
           L+    +   L +A  L  EM GR +LPD +   ++++K  +   +DEA EL
Sbjct: 388 LIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHEL 439


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 125/239 (52%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I  L    +  +S  LL E+   G+  + V+ T+LMD   K G+  E   +    L
Sbjct: 344 YCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCAL 403

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   VT+ VLID LC++G V  A      M D  +HPNV  ++++I+GL K+  + 
Sbjct: 404 SDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLG 463

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A +   +M +R + P+   Y  ++DG+ K +  + AL+L + M   GV+++      LV
Sbjct: 464 KAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLV 523

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            GL + G ++EA  LF +M  RG+L D +   +L+   ++ GNM  A ++  E+  R L
Sbjct: 524 NGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTERNL 582



 Score =  114 bits (285), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 124/244 (50%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+     ++ GLC   +F ++  L  EM++ G   N V   TL+D+ +KA   SE+  LL
Sbjct: 305 DVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLL 364

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            E++   + + +V +  L+D L K G + E  D F         PN   YT LID LC+ 
Sbjct: 365 GEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRA 424

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A  +  EM  + + P+   ++++I+G  K     +A +   +M E G+D ++  Y
Sbjct: 425 GNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTY 484

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +++ G  +C   + A  L+HEM+  G+  ++ +   L+    + G M+EA  L  +M  
Sbjct: 485 GTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNK 544

Query: 249 RGLL 252
           RG+L
Sbjct: 545 RGML 548



 Score =  104 bits (259), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 1/247 (0%)

Query: 1   MKGKNI-KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           ++G+ I + D+  +  ++ G C     E +      M+  G+  + V   TL+    +AG
Sbjct: 191 VRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAG 250

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           E   A  +L+ M    +E  VVT+   I   C++  V +A   +  M   G+ P+V   +
Sbjct: 251 EADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLS 310

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           AL+DGLC+      A  LF EM K    P+   Y  LID   K     E+  L   +   
Sbjct: 311 ALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSR 370

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           GV +DL  YTSL+  L + G + E + +FH  +     P+ +    L+      GN+D A
Sbjct: 371 GVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGA 430

Query: 240 IELQNEM 246
            ++  EM
Sbjct: 431 EQMLLEM 437



 Score =  100 bits (248), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 6/235 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           + +  DL +Y +++  L  + K ++ K +      +  T N V  T L+DA  +AG    
Sbjct: 370 RGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDG 429

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A  +L EM D  +   VVTF  +I+GL K GL+ +A DY  +M + G+ PNV  Y  ++D
Sbjct: 430 AEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMD 489

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           G  K    E A +L+ EM    +  +      L++G  K+   +EA  L   M + G+ L
Sbjct: 490 GFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLL 549

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL------CISLLKKHYE 232
           D   YT+L+ GL + G++  A  +  E+  R + PD ++      C+ +L K  E
Sbjct: 550 DHVNYTTLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKE 604



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 3/249 (1%)

Query: 7   KADLPLYGTIIWGLCIESKFED-SKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            AD   Y  +I GL  + +    +  LL+EM + G+  + V   T + A  + G+   A 
Sbjct: 125 SADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAA 184

Query: 66  SLLDEMLDSR--IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           +L + M+  R    + VV +  L+DG CKSG +  A+    RM   G+  +V  Y  L+ 
Sbjct: 185 ALAEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVA 244

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
           GLC+    + AR + + M    + P+   YT  I    +  +  +A +L   M  +GV  
Sbjct: 245 GLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLP 304

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D+   ++LV GL R G   EA  LF EM   G  P+ +   +L+   ++     E+  L 
Sbjct: 305 DVVTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLL 364

Query: 244 NEMMGRGLL 252
            E++ RG++
Sbjct: 365 GEVVSRGVV 373



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 80/158 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K++  ++  + +II GL  +     +   + +MKE G+  N V   T+MD +FK  E
Sbjct: 437 MEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQE 496

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL L  EML   +EV      +L++GL K+G + EA   F  M   G+  +   YT 
Sbjct: 497 QESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTT 556

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           LIDGL K   +  A  +  E+ +R++ PD   Y   ++
Sbjct: 557 LIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVN 594


>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
 gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
          Length = 526

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 123/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
            K   +  D  +Y   +   C      ++  LL+EMK  GLT + +  T L++ Y   GE
Sbjct: 96  FKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGE 155

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  + +EML + IE  +VT+ +L  G CKSGLV E  D   RM D GL PN   Y  
Sbjct: 156 MQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGI 215

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
            I G C+   +  A  LF+ + ++ +      Y++++ GYL       A  L  R+   G
Sbjct: 216 AIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQG 275

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             +D  + + L+  L R G++Q A  +   M+   ++PD I    L+  + + G+MD+A 
Sbjct: 276 NLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAH 335

Query: 241 ELQNEMMGRGL 251
              ++M+ RGL
Sbjct: 336 LWFHDMVQRGL 346



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 97/196 (49%), Gaps = 16/196 (8%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N+  D+  Y  +I   C     + + L   +M + GL+ + ++ T LM+ Y KAG   EA
Sbjct: 310 NVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEA 369

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKS-------GLVREAIDYFGR---------MPD 108
             L  +M +  I+  V+ + VL+DG  K        G+ +E   +  R         M D
Sbjct: 370 CQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKD 429

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
             + P+V  YT LIDG CK   +  AR LFDEM ++ + PD  AYTALI+GY       +
Sbjct: 430 MQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISK 489

Query: 169 ALNLKNRMTEVGVDLD 184
           A +L   M + G++ D
Sbjct: 490 AEDLLQEMIDKGIEPD 505



 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 127/256 (49%), Gaps = 16/256 (6%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y +++ G  +    + + +L   +   G   +   C+ L++   + G    A ++   M
Sbjct: 247 MYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIM 306

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           L+  +   V+++  LI   C++G + +A  +F  M   GL  +V VYT L++G CK   +
Sbjct: 307 LEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRL 366

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLK-------------HESFKEALN---LKNR 175
           + A  LF +M    + PD  AYT L+DG+LK               SF    N   L + 
Sbjct: 367 QEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSS 426

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           M ++ ++ D+  YT L+ G  +  +L EAR LF EM+ +G+ PD     +L+  +  +G 
Sbjct: 427 MKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGE 486

Query: 236 MDEAIELQNEMMGRGL 251
           + +A +L  EM+ +G+
Sbjct: 487 ISKAEDLLQEMIDKGI 502



 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 16/222 (7%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
           +I  LC     + +  +   M E+ +  + +  + L+  Y + G+  +A     +M+   
Sbjct: 286 LINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRG 345

Query: 76  IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK-------- 127
           + + V+ + +L++G CK+G ++EA   F +M + G+ P+V  YT L+DG  K        
Sbjct: 346 LSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWE 405

Query: 128 ------KNCIERARN--LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
                 ++ + RA +  L   M    + PD   YT LIDG  K E   EA  L + M + 
Sbjct: 406 GIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQK 465

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           G+  D  AYT+L+ G    G + +A  L  EMI +GI PDE+
Sbjct: 466 GLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDEL 507



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 105/207 (50%)

Query: 36  MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
           M  +G+  N  I + L+  + K G  SE ++   +  DS + +  V + + +D  CK+G 
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 120

Query: 96  VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
           + EA+     M   GL P+   YT LI+G C K  ++ A+ +F+EM K ++ PD   Y  
Sbjct: 121 MNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNI 180

Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
           L  G+ K     E  +L +RM + G++ +   Y   + G  R G+L EA VLF+ +  +G
Sbjct: 181 LASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKG 240

Query: 216 ILPDEILCISLLKKHYERGNMDEAIEL 242
           I   E++  S++  +   G  D A  L
Sbjct: 241 IDHIEVMYSSMVCGYLLSGWTDHAYML 267



 Score = 90.1 bits (222), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 103/239 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++ GLC E + ++++ LL      G   +    + L+ +Y K G   +A+   + M+
Sbjct: 3   YNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMV 62

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              IE        L+    K G+  E I YF +  D GLH +  +Y   +D  CK   + 
Sbjct: 63  SHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMN 122

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  L +EM    + PD   YT LI+GY      + A  +   M +  ++ D+  Y  L 
Sbjct: 123 EAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILA 182

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  + G + E   L   M   G+ P+ +     +      GN+ EA  L N +  +G+
Sbjct: 183 SGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGI 241



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 93/205 (45%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           + K++GL  + VI    MD Y K G  +EA+ LL+EM    +    + +  LI+G C  G
Sbjct: 95  KFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKG 154

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            ++ A   F  M    + P++  Y  L  G CK   +    +L D M    + P++  Y 
Sbjct: 155 EMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYG 214

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
             I G+ +  +  EA  L N + E G+D     Y+S+V G    G    A +LF  +  +
Sbjct: 215 IAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQ 274

Query: 215 GILPDEILCISLLKKHYERGNMDEA 239
           G L D   C  L+      GN+  A
Sbjct: 275 GNLVDHFSCSKLINDLCRVGNVQGA 299



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 16/183 (8%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFK--- 57
           M  + +  D+ +Y  ++ G C   + +++  L  +M   G+  + +  T L+D + K   
Sbjct: 341 MVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETL 400

Query: 58  -------AGEPSEAL------SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG 104
                  A E    L       LL  M D +IE  V  + VLIDG CK+  + EA + F 
Sbjct: 401 QQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFD 460

Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
            M   GL P+   YTALI+G C +  I +A +L  EM  + + PD   ++ L    L+  
Sbjct: 461 EMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSR 520

Query: 165 SFK 167
             +
Sbjct: 521 KIQ 523



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 76/167 (45%)

Query: 81  VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
           + + +++DGLCK   + EA          G +P+V  Y+ LI   CK   + +A + ++ 
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
           M    +  +    + L+  + K     E +    +  + G+ LD   Y   +    + G+
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGN 120

Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           + EA  L +EM   G+ PD+I    L+  +  +G M  A ++  EM+
Sbjct: 121 MNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEML 167


>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           lycioides]
          Length = 397

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 105/211 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK +D+  +  EM + GL  N V  TTL+D + K G 
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGR 245

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A D    M   GL P+   YT 
Sbjct: 246 VDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 305

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  +E A      M +  +  D  AYTALI G  + E + +A  +   M  VG
Sbjct: 306 LIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVG 365

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
           +  D   YT ++    + G +     L  EM
Sbjct: 366 LKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396



 Score =  113 bits (282), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 112/215 (52%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L + M  +G+  +    + L++   K  +  +A  + DEMLD  +    VTF  LIDG C
Sbjct: 182 LKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHC 241

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+G V  A++ + +M    L P++  Y  LI GLCKK  +++A +L DEM  + + PD  
Sbjct: 242 KNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 301

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LIDG  K    + A   + RM +  + LD  AYT+L+ GL +     +A  +  EM
Sbjct: 302 TYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREM 361

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +  G+ PD      ++ +  ++G++    +L  EM
Sbjct: 362 LSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 119/235 (50%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G  A+      LM  + K G+   A S+ + + 
Sbjct: 105 YFKLVWGF------------YEEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAIT 152

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV+F  L++G  + G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 153 KWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMD 212

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +FDEM  + ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 213 DANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLI 272

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A  L  EM  +G+ PD+I   +L+    + G+++ A E +  M+
Sbjct: 273 YGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMI 327



 Score = 80.9 bits (198), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 104/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A        + +  V   T   +++ L K    +    +
Sbjct: 53  SDIYVFSGLITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 112

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK+  I  A+++F+ + K  + P   ++  L++GY++
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 172

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LKN M   GV  D+  Y+ L+ GL +   + +A  +F EM+ +G++P+ + 
Sbjct: 173 LGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVT 232

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 261



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 92/183 (50%)

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +E+L+     ++  F +L+   CK G +  A   F  +  +GL P+V  +  L++G  + 
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++    L + M    + PD   Y+ LI+G  K     +A  + + M + G+  +   +
Sbjct: 174 GDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTF 233

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
           T+L+ G  + G +  A  ++ +M+ + + PD I   +L+    ++G++ +A +L +EM  
Sbjct: 234 TTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 293

Query: 249 RGL 251
           +GL
Sbjct: 294 KGL 296


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 2/254 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           KG+N    +  YG  I GLC     ED+   + +++ +    N      L+  + + G P
Sbjct: 219 KGEN--PTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRP 276

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EAL LL+EM D  I   + ++ +L++  C  G +   ++    M      P +   T++
Sbjct: 277 DEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSV 336

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           + GL  K  +    N F E+  +    D  +Y+ LI G+LK  + K A NL + M + G+
Sbjct: 337 LMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGL 396

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
             D   Y SL+    R G L+EA   F+ M+  G+ PD I C  ++ ++  RG  +EA+ 
Sbjct: 397 VPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALI 456

Query: 242 LQNEMMGRGLLSGS 255
             N+M  + +L  S
Sbjct: 457 YINQMKDQNILPNS 470



 Score =  114 bits (284), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 120/249 (48%), Gaps = 5/249 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K  K DL  Y T+I G       + +  L+ EM++NGL  + +I  +L+  Y + G 
Sbjct: 356 LSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGC 415

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL     ML   ++  ++T   ++D  C  G   EA+ Y  +M D  + PN   Y+ 
Sbjct: 416 LKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSV 475

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK---EALNLKNRMT 177
           +I+ LCK   +E+A  +   M K ++ P    YT ++DGY K   FK   +A  L  +M 
Sbjct: 476 IINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQ--FKNPMKAWKLYRKMP 533

Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
           ++G   D    T LV   S+ G + +A  LF EM   G+  DE    +++  +   GN+ 
Sbjct: 534 KLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVK 593

Query: 238 EAIELQNEM 246
            A  +  +M
Sbjct: 594 RAWSMYKKM 602



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 116/227 (51%), Gaps = 1/227 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA-G 59
           MK +NI  +   Y  II  LC     E +  +L  M ++ +  + +  TT+MD Y K   
Sbjct: 461 MKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFK 520

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
            P +A  L  +M     +   VT  VL+D   K G + +A++ F  M + GL  +   +T
Sbjct: 521 NPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFT 580

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+IDG C+   ++RA +++ +M + ++ P+   YT L+DG+ K +    A  L + M   
Sbjct: 581 AIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRN 640

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
            V  D+  YT+L+ G  R  ++  A  +F EM  +G LPD I  ++L
Sbjct: 641 SVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTL 687



 Score =  103 bits (257), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 36/288 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +  D  +Y ++I   C +   +++      M ++GL  + + C  ++D Y   G+
Sbjct: 391 MRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQ 450

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA----------------IDY-- 102
             EAL  +++M D  I     T+ V+I+ LCK   V +A                I Y  
Sbjct: 451 FEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTT 510

Query: 103 ------------------FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
                             + +MP  G  P+    T L+D   K+  + +A NLF EM + 
Sbjct: 511 IMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEE 570

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
            +  D  A+TA+IDGY +  + K A ++  +M    V  ++  YT LV G  +   L  A
Sbjct: 571 GLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMA 630

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            +L  +M    + PD     +L+  +    N+D A E+ +EM  +G L
Sbjct: 631 TMLIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTL 678



 Score =  101 bits (252), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 110/225 (48%)

Query: 27  EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
           E + L+L EM+E G     V     +    + G   +A + + ++  S   + +  +  L
Sbjct: 207 EQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNAL 266

Query: 87  IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
           I G C+ G   EA+     M D G+ P++  Y+ L++  C +  IE   NL  EM   + 
Sbjct: 267 IQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNK 326

Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
            P     T+++ G        + LN  + ++  G   DL +Y++L+ G  +  +++ A  
Sbjct: 327 KPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANN 386

Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           L HEM   G++PD I+ ISL++++  +G + EA++    M+  GL
Sbjct: 387 LVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGL 431



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 84/163 (51%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L  +M + G   + V  T L+D + K G+ S+AL+L  EM +  +      F  +IDG C
Sbjct: 528 LYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYC 587

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G V+ A   + +M    + PNV  YT L+DG CK   ++ A  L D+M +  + PD  
Sbjct: 588 RVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVK 647

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            YTALI GY + E+   A  + + M + G   D  AY +L  G
Sbjct: 648 TYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTLGLG 690



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 117/252 (46%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+  N K  L    +++ GL  +    D      E+   G   + +  +TL+  + K   
Sbjct: 321 MEHCNKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHN 380

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A +L+ EM  + +    + +  LI   C+ G ++EA+  F  M   GL P++     
Sbjct: 381 VKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNH 440

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++D  C +   E A    ++M  ++++P++  Y+ +I+   K+++ ++A  +   M +  
Sbjct: 441 IVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDN 500

Query: 181 VDLDLNAYTSLVWGLSR-CGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           +   +  YT+++ G ++   +  +A  L+ +M   G  PD +    L+    +RG M +A
Sbjct: 501 IFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKA 560

Query: 240 IELQNEMMGRGL 251
           + L  EM   GL
Sbjct: 561 LNLFKEMAEEGL 572



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 96/221 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK + I  D+  Y  ++   C E   E    L+ EM+        V CT+++      G 
Sbjct: 286 MKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGL 345

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++ L+   E+     +  ++++  LI G  K   V+ A +    M   GL P+  +Y +
Sbjct: 346 VNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYIS 405

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C+K C++ A   F  M +  + PD      ++D Y     F+EAL   N+M +  
Sbjct: 406 LIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQN 465

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  +   Y+ ++  L +   +++A  +   M    I P  I
Sbjct: 466 ILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVI 506



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 10/210 (4%)

Query: 51  LMDAYFKAGEPSEALS-LLDEMLDSR--IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
           L D  F   E +  +S L    LDS   +  +     +LI     + ++ +A D F +  
Sbjct: 83  LTDIVFYYKEENLNVSGLFSTFLDSPECVGRSATVLSLLIKVFASNKMLADAKDVFMQAK 142

Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE--- 164
             G+  N++    L+  L + + +E  R+LFD++      P+   YT +I+ Y K     
Sbjct: 143 KIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQ 202

Query: 165 --SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
               ++A  +   M E G +  +  Y   + GL R G +++A     ++      P  I 
Sbjct: 203 NIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSN-QPLNIY 261

Query: 223 CISLLKKHY-ERGNMDEAIELQNEMMGRGL 251
           C + L + + ++G  DEA++L  EM   G+
Sbjct: 262 CYNALIQGFCQKGRPDEALKLLEEMKDEGI 291


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 124/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++  +  + TI+ GLC+E     +   +  +K+ G  ++      +++   K G  S AL
Sbjct: 144 VEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAAL 203

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           S L +M +    + V  +  ++DGLCK G+V EA D F +M   G+ P++  Y  LI GL
Sbjct: 204 SYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGL 263

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  +  + A  L   M ++ ++PD   +  +   +LK      A ++ + M  +G++ D+
Sbjct: 264 CNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDV 323

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+S++        +++A  +F  MI +G LP+ +   SL+    E  NM++A+    E
Sbjct: 324 VTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGE 383

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 384 MVNNGL 389



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 117/247 (47%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K ++P +  +I  LC  +       +L  M + G+  + V  TT+++     G  ++A+
Sbjct: 109 VKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAI 168

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             +D + D   E    T   +I+GLCK G    A+ Y  +M +   + +V  Y A++DGL
Sbjct: 169 RFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGL 228

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +  A +LF +M  + + PD   Y  LI G    + +KEA  L   M   G+  D+
Sbjct: 229 CKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDV 288

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             +  +     + G +  A+ +F  M   GI  D +   S++  H     M +A+E+ + 
Sbjct: 289 QTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDL 348

Query: 246 MMGRGLL 252
           M+ +G L
Sbjct: 349 MIRKGCL 355



 Score = 94.7 bits (234), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 113/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N   D+  Y  ++ GLC +    ++  L S+M   G+  +      L+        
Sbjct: 209 MEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDR 268

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  LL  M+   I   V TF V+     K+G++  A   F  M   G+  +V  Y++
Sbjct: 269 WKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSS 328

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I   C  N ++ A  +FD M ++  +P+   YT+LI G+ + ++  +A+     M   G
Sbjct: 329 IIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNG 388

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +D ++  + +L+ G  + G    A+ LF  M   G LPD   C  +L   ++     EA+
Sbjct: 389 LDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAM 448

Query: 241 ELQNEM 246
            L  E+
Sbjct: 449 SLFREL 454



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 127/286 (44%), Gaps = 37/286 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK I+ DL  Y  +I GLC   +++++  LL+ M   G+  +      +   + K G 
Sbjct: 244 MTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVIGGRFLKTGM 303

Query: 61  PSEALS-------------------------LLDEMLDSRIEV-----------TVVTFC 84
            S A S                         +L++M D+ +EV            +VT+ 
Sbjct: 304 ISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDA-MEVFDLMIRKGCLPNIVTYT 362

Query: 85  VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
            LI G C+   + +A+ + G M + GL PN+  +  LI G CK      A+ LF  M K 
Sbjct: 363 SLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKH 422

Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
             +PD      ++DG  K     EA++L   + ++  DLD+  Y+ ++ G+   G L +A
Sbjct: 423 GQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDA 482

Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
             LF  +  +G+  D +    ++    + G +D+A +L  +M   G
Sbjct: 483 LELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENG 528



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 1/205 (0%)

Query: 16  IIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           +++G+  + K   + + L+  M   G+  N      +++   +        S+L  M   
Sbjct: 83  LLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKI 142

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
            +E ++VTF  +++GLC  G V +AI +   + D G   +     A+I+GLCK      A
Sbjct: 143 GVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAA 202

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            +   +M +++   D TAY A++DG  K     EA +L ++MT  G+  DL  Y  L+ G
Sbjct: 203 LSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHG 262

Query: 195 LSRCGHLQEARVLFHEMIGRGILPD 219
           L      +EA  L   M+ +GI+PD
Sbjct: 263 LCNFDRWKEAAPLLANMMRKGIMPD 287



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 119/246 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D+  Y +II   C+ ++ +D+  +   M   G   N V  T+L+  + +    ++A+
Sbjct: 319 IEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRKGCLPNIVTYTSLIHGWCEIKNMNKAM 378

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
             L EM+++ ++  +VT+  LI G CK+G    A + F  M   G  P++     ++DGL
Sbjct: 379 YFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGL 438

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K +    A +LF E+ K +   D   Y+ +++G        +AL L + ++  GV +D+
Sbjct: 439 FKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDV 498

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y  ++ GL + G L +A  L  +M   G  PDE      ++    R  + ++ +    
Sbjct: 499 VTYNIMINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMF 558

Query: 246 MMGRGL 251
           M G+G 
Sbjct: 559 MKGKGF 564



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 82/162 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +  ++  + T+I G C   K   +K L   M ++G   +   C  ++D  FK   
Sbjct: 384 MVNNGLDPNIVTWNTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHF 443

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            SEA+SL  E+     ++ ++ + ++++G+C SG + +A++ F  +   G+  +V  Y  
Sbjct: 444 HSEAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNI 503

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +I+GLCK+  ++ A +L  +M +    PD   Y   + G L+
Sbjct: 504 MINGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLR 545



 Score = 49.3 bits (116), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 81/188 (43%)

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           AL    +M+  +    V  F +L   + K      AI     M   G+ PNV  +  +I+
Sbjct: 62  ALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVIN 121

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LC+ N      ++   M K  + P    +T +++G     +  +A+   + + ++G + 
Sbjct: 122 CLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYES 181

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D     +++ GL + GH   A     +M  +    D     +++    + G + EA +L 
Sbjct: 182 DRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLF 241

Query: 244 NEMMGRGL 251
           ++M G+G+
Sbjct: 242 SQMTGKGI 249


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  DL  Y +++  LC     + ++  L +M   G+  +      L+  Y   G+
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQ 306

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM    I   VV    L+  LCK G ++EA D F  M   G +P+V  YT 
Sbjct: 307 WKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTI 366

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +++G   K C+    +LFD M    + PD   +  LI  Y       +A+ + N M + G
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V   +  Y +++  L R G + +A   F++MI +G++PD+     L++     G++ +A 
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAK 486

Query: 241 ELQNEMMGRGL 251
           EL +E+M  G+
Sbjct: 487 ELISEIMNNGM 497



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 120/246 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   +K  +  Y T+I  LC   K +D+    ++M + G+  +      L+  +   G 
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L+ E++++ + + +V F  +I+ LCK G V +A + F    + GLHP+  VY  
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG C    +E+A  +FD M    + P+   Y  L++GY K     E L+L   M + G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      Y  ++ GL   G    A+V FHEM   GI  ++     +L+  ++    DEAI
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661

Query: 241 ELQNEM 246
            L  E+
Sbjct: 662 FLFKEL 667



 Score =  107 bits (267), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 123/250 (49%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G     D+  Y T+I G   E     +  L  EM + G+  + V  ++++ A  KA    
Sbjct: 214 GTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMD 273

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
           +A + L +M++  +     T+  LI G   +G  +EA+  F  M    + P+V     L+
Sbjct: 274 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
             LCK   I+ AR++FD M  +   PD  +YT +++GY       +  +L + M   G+ 
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            D+  +  L+   + CG L +A ++F+EM   G+ P  +  ++++      G MD+A+E 
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 243 QNEMMGRGLL 252
            N+M+ +G++
Sbjct: 454 FNQMIDQGVV 463



 Score =  107 bits (267), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 124/251 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ ++I  D+    T++  LC   K ++++ +   M   G   +    T +++ Y   G 
Sbjct: 317 MRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGC 376

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +   L D ML   I   + TF VLI      G++ +A+  F  M D G+ P+V  Y  
Sbjct: 377 LVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMT 436

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LC+   ++ A   F++M  + ++PD  AY  LI G+  H S  +A  L + +   G
Sbjct: 437 VIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNG 496

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + LD+  + S++  L + G + +A+ +F   +  G+ PD ++   L+  +   G M++A+
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 556

Query: 241 ELQNEMMGRGL 251
            + + M+  G+
Sbjct: 557 RVFDAMVSAGI 567



 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 122/245 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  +G+II  LC   +  D++ +       GL  + V+   LMD Y   G+  +AL
Sbjct: 497 MRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKAL 556

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            + D M+ + IE  VV +  L++G CK G + E +  F  M   G+ P+  +Y  +IDGL
Sbjct: 557 RVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGL 616

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            +      A+  F EM +  +  +   Y+ ++ G  K+  F EA+ L   +  + V +D+
Sbjct: 617 FEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDI 676

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
               +++ G+ +   ++EA+ LF  +   G++P  +    ++    + G ++EA ++ + 
Sbjct: 677 ITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSS 736

Query: 246 MMGRG 250
           M   G
Sbjct: 737 MQNAG 741



 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 121/251 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G  I  D+  +  +I         + + ++ +EM+++G+  + V   T++ A  + G+
Sbjct: 387 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+   ++M+D  +      +  LI G C  G + +A +    + + G+  ++  + +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I+ LCK   +  A+N+FD      + PD   Y  L+DGY      ++AL + + M   G
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ ++  Y +LV G  + G + E   LF EM+ +GI P  IL   ++   +E G    A 
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626

Query: 241 ELQNEMMGRGL 251
              +EM   G+
Sbjct: 627 VKFHEMTESGI 637



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 121/251 (48%), Gaps = 2/251 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MKG+N   D+  Y  ++ G   +    D   L   M  +G+  +      L+ AY   G 
Sbjct: 354 MKGQN--PDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 411

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A+ + +EM D  ++  VVT+  +I  LC+ G + +A++ F +M D G+ P+   Y  
Sbjct: 412 LDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHC 471

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI G C    + +A+ L  E+    M  D   + ++I+   K     +A N+ +    VG
Sbjct: 472 LIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  D   Y  L+ G    G +++A  +F  M+  GI P+ +   +L+  + + G +DE +
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591

Query: 241 ELQNEMMGRGL 251
            L  EM+ +G+
Sbjct: 592 SLFREMLQKGI 602



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 3/215 (1%)

Query: 41  LTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
           L+  +     LMD   +A  P  AL+   ++L + + V  +    L+ G C++    EA+
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 101 DYF-GRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMI--PDTTAYTALI 157
           D    R P+ G  P+V  Y  L+  LC +    +A +L   M +   +  PD  AY  +I
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           DG+ K     +A +L   M + G+  DL  Y+S+V  L +   + +A     +M+ +G+L
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           PD     +L+  +   G   EA+ +  EM  + +L
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSIL 323



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 120/252 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  +I G C       +K L+SE+  NG+  + V   ++++   K G 
Sbjct: 457 MIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGR 516

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A ++ D  ++  +    V + +L+DG C  G + +A+  F  M   G+ PNV  Y  
Sbjct: 517 VMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGT 576

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L++G CK   I+   +LF EM ++ + P T  Y  +IDG  +      A    + MTE G
Sbjct: 577 LVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + ++   Y+ ++ GL +     EA  LF E+    +  D I   +++   ++   ++EA 
Sbjct: 637 IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAK 696

Query: 241 ELQNEMMGRGLL 252
           +L   +   GL+
Sbjct: 697 DLFASISRSGLV 708



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 3/222 (1%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS-LLDEMLDSRIEVTVVTFCVLIDGL 90
              ++   GL  + +I + L+  + +A    EAL  LL    +      V ++ +L+  L
Sbjct: 135 FFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSL 194

Query: 91  CKSGLVREAIDYFGRMPDFGL--HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
           C  G   +A D    M + G    P+V  Y  +IDG  K+  + +A +LF EM +R + P
Sbjct: 195 CNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 254

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           D   Y++++    K  +  +A     +M   GV  D   Y +L++G S  G  +EA  +F
Sbjct: 255 DLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVF 314

Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            EM  + ILPD +   +L+    + G + EA ++ + M  +G
Sbjct: 315 KEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 101/217 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D  +Y  ++ G C+  K E +  +   M   G+  N V   TL++ Y K G   E L
Sbjct: 532 LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGL 591

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  EML   I+ + + + ++IDGL ++G    A   F  M + G+  N   Y+ ++ GL
Sbjct: 592 SLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGL 651

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K  C + A  LF E+   ++  D      +I G  +    +EA +L   ++  G+    
Sbjct: 652 FKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCA 711

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
             Y+ ++  L + G ++EA  +F  M   G  PD  L
Sbjct: 712 VTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRL 748



 Score = 77.4 bits (189), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/242 (21%), Positives = 107/242 (44%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    I+ ++  YGT++ G C   + ++   L  EM + G+  +T++   ++D  F+AG 
Sbjct: 562 MVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A     EM +S I +   T+ +++ GL K+    EAI  F  +    +  ++     
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 681

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I G+ +   +E A++LF  + +  ++P    Y+ +I   LK    +EA ++ + M   G
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAG 741

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D      +V  L +   +  A     ++  R    + +  + L+     +G   E I
Sbjct: 742 CEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQI 801

Query: 241 EL 242
             
Sbjct: 802 RF 803


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 121/246 (49%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ +N K ++ +Y TI+ GLC +    ++  L SEM   G+  N V    L+      G 
Sbjct: 208 MEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGR 267

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA SLLDEM+   +   +    +L+D  CK G V +A    G M   G  P+V  Y +
Sbjct: 268 WKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNS 327

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C +N +  A  +F  M  R  +PD   +T+LI G+ K ++  +A++L   M+++G
Sbjct: 328 LIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMG 387

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D+  +T+L+ G  + G    A+ LF  M   G +P+   C  +L    +   + EA+
Sbjct: 388 FVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAV 447

Query: 241 ELQNEM 246
            L   M
Sbjct: 448 SLAKAM 453



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 114/238 (47%)

Query: 15  TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           T+I GLC++     +  L   M++     +      L++   K G+   A+  L +M + 
Sbjct: 152 TLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEER 211

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
             +  VV +  ++DGLCK GLV EA++    M   G+ PN+  Y  LI GLC     + A
Sbjct: 212 NWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEA 271

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
            +L DEM K  M PD      L+D + K     +A ++   M   G   D+  Y SL+  
Sbjct: 272 GSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHI 331

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                 + EA  +FH M+ RG LPD ++  SL+    +  N+++A+ L  EM   G +
Sbjct: 332 YCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFV 389



 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 120/247 (48%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+AD      +I  LC          +L  M + GL    +  TTL++     G  ++A+
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAV 167

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L D M      + V T+ VLI+GLCK+G    A+ +  +M +    PNV VY+ ++DGL
Sbjct: 168 GLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK   +  A NL  EM  + + P+   Y  LI G      +KEA +L + M ++G+  DL
Sbjct: 228 CKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDL 287

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
                LV    + G + +A+ +   MI  G  PD     SL+  +  +  M+EA+ + + 
Sbjct: 288 QMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHL 347

Query: 246 MMGRGLL 252
           M+ RG L
Sbjct: 348 MVSRGRL 354



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 35/287 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M GK ++ +L  Y  +I GLC   +++++  LL EM + G+  +  +   L+DA+ K G+
Sbjct: 243 MNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGK 302

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A S++  M+ +     V T+  LI   C    + EA+  F  M   G  P++ V+T+
Sbjct: 303 VMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTS 362

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI----------------------- 157
           LI G CK   I +A +L +EM K   +PD   +T LI                       
Sbjct: 363 LIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYG 422

Query: 158 ------------DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
                       DG  K     EA++L   M +  +DL++  Y+ L+ G+   G L  A 
Sbjct: 423 QVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAW 482

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            LF  + G+G+  +  +   ++K   ++G++D+A +L   M   G L
Sbjct: 483 ELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCL 529



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 87/176 (49%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  + T+I G C   +   +K L   M + G   N   C  ++D   K    SEA+SL 
Sbjct: 391 DVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLA 450

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M  S +++ +V + +L+DG+C +G +  A + F  +P  GL  NV +YT +I GLCK+
Sbjct: 451 KAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQ 510

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
             +++A +L   M +   +P+   Y   + G L  +    ++     M + G  +D
Sbjct: 511 GSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVD 566



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 103/212 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I   C+++K  ++  +   M   G   + V+ T+L+  + K    ++A+ LL
Sbjct: 321 DVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLL 380

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           +EM        V T+  LI G C++G    A + F  M  +G  PN+     ++DGLCK+
Sbjct: 381 EEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKE 440

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           N +  A +L   M K ++  +   Y+ L+DG         A  L + +   G+ +++  Y
Sbjct: 441 NLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIY 500

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           T ++ GL + G L +A  L   M   G LP+ 
Sbjct: 501 TIMIKGLCKQGSLDKAEDLLINMEENGCLPNN 532



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 86/180 (47%)

Query: 40  GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
           G+ A+T+    +++   +    +   S+L  M    +E TV+T   LI+GLC  G V +A
Sbjct: 107 GIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQA 166

Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +     M       +V  Y  LI+GLCK      A     +M +R+  P+   Y+ ++DG
Sbjct: 167 VGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDG 226

Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
             K     EALNL + M   GV  +L  Y  L+ GL   G  +EA  L  EM+  G+ PD
Sbjct: 227 LCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPD 286



 Score = 87.0 bits (214), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 86/187 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+ ++ ++I G C +     +  LL EM + G   +    TTL+  + +AG P  A  L 
Sbjct: 356 DIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELF 415

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             M        + T  V++DGLCK  L+ EA+     M    L  N+ +Y+ L+DG+C  
Sbjct: 416 LNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSA 475

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A  LF  +P + +  +   YT +I G  K  S  +A +L   M E G   +   Y
Sbjct: 476 GKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTY 535

Query: 189 TSLVWGL 195
              V GL
Sbjct: 536 NVFVQGL 542



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 1/190 (0%)

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYTAL 121
           EAL L   M   +   +V  F +L+  + +      AI     M    G+  +      +
Sbjct: 59  EALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIV 118

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I+ LC+   +    ++   M K  + P     T LI+G     +  +A+ L + M ++  
Sbjct: 119 INCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWY 178

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
            LD+  Y  L+ GL + G    A     +M  R   P+ ++  +++    + G + EA+ 
Sbjct: 179 PLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALN 238

Query: 242 LQNEMMGRGL 251
           L +EM G+G+
Sbjct: 239 LCSEMNGKGV 248


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 116/220 (52%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K +  D  +Y  ++ GLC + +F  +KLLLSEM +  L  +  +  TL+D + +  E
Sbjct: 441 MMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNE 500

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  L + ++   I+  VV + V+I GLCK G + +A+ Y  +M      P+   ++ 
Sbjct: 501 LDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHST 560

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG  K++ ++ A  +F +M K+   P+  AYT+LI+G+ K      A  +   M    
Sbjct: 561 VIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFN 620

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
           ++ ++  YT L+ G S+ G  ++A   F  M+    LP++
Sbjct: 621 LEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPND 660



 Score =  113 bits (283), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 121/254 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K K     L  YG +I G C   KF+    LL+EM   GL  N  +  +++DA +K G 
Sbjct: 266 LKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGL 325

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  ++  M +   E  + T+ +LI+  C  G ++EA ++  R  +  L PN   YT 
Sbjct: 326 VDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTP 385

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   CK+     A ++  ++ +    PD  +Y A I G +       AL ++ +M E G
Sbjct: 386 LMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKG 445

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           V  D   Y  L+ GL + G    A++L  EM+   + PD  +  +L+        +D+A 
Sbjct: 446 VFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKAT 505

Query: 241 ELQNEMMGRGLLSG 254
           EL   +M +G+  G
Sbjct: 506 ELFEVVMSKGIDPG 519



 Score = 99.8 bits (247), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 118/241 (48%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y  +I   C   + ++++  L   KE  L  N    T LM AY K G+   A  +L
Sbjct: 344 DITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDML 403

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            ++ ++  +  +V++   I G    G +  A+    +M + G+ P+  +Y  L+ GLCKK
Sbjct: 404 FKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKK 463

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
                A+ L  EM   ++ PD   Y  L+DG++++    +A  L   +   G+D  +  Y
Sbjct: 464 GRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGY 523

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             ++ GL +CG + +A    ++M      PDE    +++  + ++ ++D A+++  +MM 
Sbjct: 524 NVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMK 583

Query: 249 R 249
           +
Sbjct: 584 Q 584



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 112/249 (44%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
           G     ++  Y  II G C +   + +  +  E+K  G          L+D + KAG+  
Sbjct: 233 GNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQ 292

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
               LL+EM    + V V  F  +ID   K GLV +A +    M + G  P++  Y  LI
Sbjct: 293 VVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILI 352

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
           +  C    I+ A    +   +R ++P+  +YT L+  Y K   +  A ++  ++ E G  
Sbjct: 353 NFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDK 412

Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
            DL +Y + + G    G +  A ++  +M+ +G+ PD  +   L+    ++G    A  L
Sbjct: 413 PDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLL 472

Query: 243 QNEMMGRGL 251
            +EM+   L
Sbjct: 473 LSEMLDLNL 481



 Score = 93.6 bits (231), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 106/233 (45%)

Query: 7   KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
           K DL  YG  I G     + + + ++  +M E G+  +  I   LM    K G    A  
Sbjct: 412 KPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKL 471

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           LL EMLD  ++     +  L+DG  ++  + +A + F  +   G+ P V  Y  +I GLC
Sbjct: 472 LLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLC 531

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           K   +  A +  ++M   +  PD   ++ +IDGY+K      AL +  +M +     ++ 
Sbjct: 532 KCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVV 591

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           AYTSL+ G  +   +  A  +F  M    + P+ +    L+    + G  ++A
Sbjct: 592 AYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKA 644



 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 15/238 (6%)

Query: 3   GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
            K I   +  Y  +I GLC   K  D+   +++MK      +    +T++D Y K  +  
Sbjct: 513 SKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLD 572

Query: 63  EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
            AL +  +M+  + +  VV +  LI+G CK   +  A   F  M  F L PNV  YT LI
Sbjct: 573 SALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILI 632

Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
            G  K    E+A + F+ M   + +P+ T +  LI+G L + +    L  KN   +  + 
Sbjct: 633 GGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLING-LTNITNTTLLIEKNEENDRSLI 691

Query: 183 LDLNA-------------YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
           LD  A             Y S++  L + G +  A++L  +M+ +G L D + C S L
Sbjct: 692 LDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSV-CFSAL 748



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 13/262 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCI--ESKFEDSKLLLSEM--KENGLTANTVICTTLMDAYF 56
           MK +N K  L    ++I   C+  E  F D  + +  M  +        V   +L++   
Sbjct: 119 MKNRNFKPTLEALNSVI---CVYAEYGFVDKAVKMFYMVCELYNCFPCVVANNSLLNCLV 175

Query: 57  KAGEPSEALSLLDEML----DSRIEVTVVTFCVLI--DGLCKSGLVREAIDYFGRMPDFG 110
           K G+   A  L D+ML    D  +++ V  + ++I   GLC  G V E           G
Sbjct: 176 KNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNG 235

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             PNV  Y  +IDG CKK  ++RA  +F+E+  +  +P    Y ALIDG+ K   F+   
Sbjct: 236 CVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVD 295

Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
            L N M  +G+++++  + S++    + G + +A  +   M   G  PD      L+   
Sbjct: 296 QLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFS 355

Query: 231 YERGNMDEAIELQNEMMGRGLL 252
              G + EA E       R LL
Sbjct: 356 CSGGRIKEAEEFLERAKERTLL 377



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 103/239 (43%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++   C +  +  +  +L ++ E G   + V     +      GE   AL + ++M+
Sbjct: 383 YTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMM 442

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           +  +      + VL+ GLCK G    A      M D  L P+  +Y  L+DG  + N ++
Sbjct: 443 EKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELD 502

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A  LF+ +  + + P    Y  +I G  K     +A++  N+M       D   +++++
Sbjct: 503 KATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVI 562

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            G  +   L  A  +F +M+ +   P+ +   SL+    +  +M  A ++   M    L
Sbjct: 563 DGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNL 621



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 12/184 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +  K ++  Y ++I G C  +    ++ +   M+   L  N V  T L+  + K G+
Sbjct: 581 MMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGK 640

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK---SGLVREA---------IDYFGRMPD 108
           P +A S  + ML +       TF  LI+GL     + L+ E          +D+F  M  
Sbjct: 641 PEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMIS 700

Query: 109 FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKE 168
            G    +A Y ++I  LCK   ++ A+ L  +M ++  + D+  ++AL+ G  +    KE
Sbjct: 701 EGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKE 760

Query: 169 ALNL 172
             N+
Sbjct: 761 WRNI 764



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 14/218 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK  N   D   + T+I G   +   + +  +  +M +     N V  T+L++ + K  +
Sbjct: 546 MKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIAD 605

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            S A  +   M    +E  VVT+ +LI G  K+G   +A  +F  M      PN   +  
Sbjct: 606 MSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHY 665

Query: 121 LIDGLC---------KKNCIERARNL----FDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
           LI+GL          +KN  E  R+L    F  M           Y ++I    KH    
Sbjct: 666 LINGLTNITNTTLLIEKN-EENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVD 724

Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            A  L+ +M   G  +D   +++L+ GL + G  +E R
Sbjct: 725 TAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWR 762


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 120/238 (50%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T++ G       ++   L S M  +G+  +    + L++   K  +  +A  L DEML
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEML 239

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +    VTF  LIDG CK+G V  A++ + +M    L P++  Y  LI GLCKK  ++
Sbjct: 240 VKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK 299

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
           +A +L DEM  + + PD   YT LIDG  K      A   + RM +  + LD  AYT+L+
Sbjct: 300 QAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALI 359

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            GL + G   +A  +  EM+  G+ PD      ++ +  ++G++ +  +L  EM   G
Sbjct: 360 SGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDG 417



 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 12/235 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++WG               E+ E G  A+      LM  + K G+   A S+ D + 
Sbjct: 122 YFKLVWGF------------YEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAIT 169

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              +  +VV++  L++G  + G + E       M   G+ P+V  Y+ LI+GLCK++ ++
Sbjct: 170 KWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMD 229

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LFDEM  + ++P+   +T LIDG+ K+     A+ +  +M    +  DL  Y +L+
Sbjct: 230 DANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 289

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           +GL + G L++A  L  EM  +G+ PD+I   +L+    + G++D A E +  M+
Sbjct: 290 YGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMI 344



 Score =  111 bits (278), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 107/221 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    ++ D+  Y  +I GLC ESK +D+  L  EM   GL  N V  TTL+D + K G 
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A+ +  +ML   +   ++T+  LI GLCK G +++A      M   GL P+   YT 
Sbjct: 263 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT 322

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG CK+  ++ A      M + ++  D  AYTALI G  +     +A  +   M  VG
Sbjct: 323 LIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVG 382

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
           +  D   YT ++    + G + +   L  EM   G +P  +
Sbjct: 383 LKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVV 423



 Score = 88.6 bits (218), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 75/159 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +++  DL  Y T+I+GLC +   + +  L+ EM   GL  + +  TTL+D   K G+
Sbjct: 273 MLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGD 332

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A      M+   I +  V +  LI GLC+ G   +A      M   GL P+   YT 
Sbjct: 333 LDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTM 392

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
           +I+  CKK  + +   L  EM +   +P    Y  L++G
Sbjct: 393 IINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 104/209 (49%)

Query: 43  ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
           ++  + + L+ AY ++G   +A+       + +  V   T   +++ L K    +    +
Sbjct: 70  SDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGF 129

Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
           +  + + G   ++  +  L+   CK   I  A+++FD + K  + P   +Y  L++GY++
Sbjct: 130 YEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189

Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
                E   LK+ M   GV  D+  Y+ L+ GL +   + +A  LF EM+ +G++P+ + 
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 249

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGL 251
             +L+  H + G +D A+E+  +M+ + L
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSL 278



 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 76/173 (43%)

Query: 80  VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
           +  F  LI    +SG +R+AI+ +    +            +++ L K    +     ++
Sbjct: 72  JYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYE 131

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           E+ +         +  L+  + K    + A ++ + +T+ G+   + +Y +L+ G  R G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 191

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
            L E   L   M+  G+ PD      L+    +   MD+A EL +EM+ +GL+
Sbjct: 192 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 244


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  117 bits (293), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 36/251 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  +  +Y  I+ GLC   + +D   LL+ MK +G   +++ C  L+D + K G+
Sbjct: 227 MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQ 286

Query: 61  PSEALSLLD-----------------------------------EMLDSRIEVTVVTFCV 85
             EA +LL                                    +M  + IE  VV + +
Sbjct: 287 IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTI 346

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G C+ G+V  A++    M   GL P+   Y ALI G C    +++AR+L  E+ K D
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P +  YT LI G  ++    EA  + N+M  +G    +  + +L+ GL + G L+EAR
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466

Query: 206 VLFHEM-IGRG 215
            LF++M IG+ 
Sbjct: 467 HLFYKMEIGKN 477



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K  NI+   P +  +I         E +     +MK+ G   +     +++    +   
Sbjct: 122 LKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEV 181

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL++ ++ML         TF +L++GLCK+G   +A+  F  M   G+ PN  +YT 
Sbjct: 182 FLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTI 241

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC+    +    L + M      PD+    AL+DG+ K     EA  L     + G
Sbjct: 242 ILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEG 301

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             L +  Y+SL+ GL R     E +    +M   GI PD +L   L++   E G +D A+
Sbjct: 302 YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYAL 361

Query: 241 ELQNEMMGRGL 251
            + N+M  RGL
Sbjct: 362 NMLNDMTQRGL 372



 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 13/263 (4%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D+ LY  +I G C     + +  +L++M + GL+ +T     L+  +   G   +A 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  E+  +    T  T+ +LI G+C++GL+ EA   F +M + G  P++  + ALIDGL
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456

Query: 126 CKKNCIERARNLFDEM-------------PKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           CK   +E AR+LF +M                D + DT +   +++   +     +A  L
Sbjct: 457 CKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKL 516

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
             ++ + GV  D+  Y  L+ G  +  ++  A  LF E+  +G  PD +   +L+   + 
Sbjct: 517 LMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHR 576

Query: 233 RGNMDEAIELQNEMMGRGLLSGS 255
               ++A  + ++M+  G    S
Sbjct: 577 VDREEDAFRVLDQMVKNGCTPSS 599



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 98/190 (51%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L+E+ +S I++   TF VLI    KSG+  +A++ FG+M DFG  P+V  Y +++  + 
Sbjct: 118 ILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMV 177

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +K     A  ++++M K +  P+   +  L++G  K+    +AL + + MT+ G+  +  
Sbjct: 178 QKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTM 237

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YT ++ GL +     +   L + M   G  PD I C +LL    + G +DEA  L    
Sbjct: 238 IYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLF 297

Query: 247 MGRGLLSGSK 256
              G + G K
Sbjct: 298 EKEGYVLGIK 307



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 35/277 (12%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N   +   +  ++ GLC   K +D+  +  EM + G+  NT+I T ++    +A    + 
Sbjct: 196 NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDV 255

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI------------------------ 100
             LL+ M  S      +T   L+DG CK G + EA                         
Sbjct: 256 HRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDG 315

Query: 101 -----------DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
                      ++  +M   G+ P+V +YT LI G C+   ++ A N+ ++M +R + PD
Sbjct: 316 LFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPD 375

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
           T  Y ALI G+       +A +L+  +++         YT L+ G+ R G L EAR +F+
Sbjct: 376 TYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFN 435

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +M   G  P  +   +L+    + G ++EA  L  +M
Sbjct: 436 QMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 120/247 (48%), Gaps = 14/247 (5%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM- 71
           Y  +I G+C     ++++ + ++M+  G + + +    L+D   KAGE  EA  L  +M 
Sbjct: 414 YTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKME 473

Query: 72  ------LDSRIE------VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
                 L  R+       +   +   +++ LC+SGL+ +A     ++ D G+ P++  Y 
Sbjct: 474 IGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYN 533

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            LI+G CK   I  A  LF E+  +   PD+  Y  LIDG+ + +  ++A  + ++M + 
Sbjct: 534 VLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKN 593

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G       Y  L+    R G L  A  L+ + + R +   E   + L ++H+E+G +++A
Sbjct: 594 GCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL-RSLPSQEDETLKLAEEHFEKGELEKA 652

Query: 240 IELQNEM 246
           +    EM
Sbjct: 653 VRCLLEM 659



 Score = 91.3 bits (225), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 111/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    K D+  Y +I+  +  +  F  +  + ++M +     N      L++   K G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + DEM    I    + + +++ GLC++    +       M   G  P+     A
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG CK   I+ A  L     K   +     Y++LIDG  + + + E      +M + G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  YT L+ G    G +  A  + ++M  RG+ PD     +L+K   + G +D+A 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 241 ELQNEM 246
            LQ E+
Sbjct: 397 SLQLEI 402



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 89/221 (40%), Gaps = 40/221 (18%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLM-------------------- 52
           YGT+I G     + ED+  +L +M +NG T ++ +   LM                    
Sbjct: 567 YGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL 626

Query: 53  --------------DAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVRE 98
                         + +F+ GE  +A+  L EM        +  + + + GLC++    E
Sbjct: 627 RSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEE 686

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           A+  F  + +  +  N      LI+GLCK   +E A ++F    ++  +        L+ 
Sbjct: 687 ALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLR 746

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLD------LNAYTSLVW 193
             +  +  K AL+L NRM   G DLD      + +Y   VW
Sbjct: 747 SLILQDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYLLSVW 787



 Score = 53.5 bits (127), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 53/249 (21%), Positives = 105/249 (42%), Gaps = 9/249 (3%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +  D+  Y  +I G C       +  L  E++  G + ++V   TL+D + +     +A 
Sbjct: 525 VVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAF 584

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA----IDYFGRMPDFGLHPNVAVYTAL 121
            +LD+M+ +    +   +  L+   C+ G +  A    + Y   +P             L
Sbjct: 585 RVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPS-----QEDETLKL 639

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
            +   +K  +E+A     EM  +    +   YT  + G  +    +EAL +   + E  +
Sbjct: 640 AEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQM 699

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
           D++  +   L+ GL + G+L+ A  +F   + +G +    +C  LL+    +  M  A++
Sbjct: 700 DVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALD 759

Query: 242 LQNEMMGRG 250
           L N M   G
Sbjct: 760 LLNRMNSAG 768


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 130/273 (47%), Gaps = 37/273 (13%)

Query: 16  IIWGLCIESKFEDSKLLLSEMKENG--LTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
           I+ GLC E++ +++  LL  M ++G     N V  +T+ D   K G+P +A +   EMLD
Sbjct: 167 ILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLD 226

Query: 74  SRIEVTVVTFCVLIDGLCK-----------------------------------SGLVRE 98
            RI   VVT+  +I  LCK                                   SG + E
Sbjct: 227 RRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTE 286

Query: 99  AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           AI +  +M   G+ PNV  Y++ +D LCK      AR +F  M KR + PD T Y++L+ 
Sbjct: 287 AIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLH 346

Query: 159 GYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
           GY    +  E   L + M +  +  D   + +L++  ++ G + EA ++F +M  +G+ P
Sbjct: 347 GYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQGLKP 406

Query: 219 DEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + +   +L+  + +   M+ A+ L  EM+  G+
Sbjct: 407 NCVTYNTLINGYCKITRMENALALFQEMVSNGV 439



 Score =  116 bits (291), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 121/250 (48%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  ++  Y +II  LC     + +  +   M +NG+T N    T+L+  +  +G+
Sbjct: 224 MLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQ 283

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            +EA+  L++M  + +E  VVT+   +D LCK+G   EA   F  M   GL P++  Y++
Sbjct: 284 LTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSS 343

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+ G   +  +     LFD M + DM PD   +  LI    K     EA+ + ++M   G
Sbjct: 344 LLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQG 403

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  +   Y +L+ G  +   ++ A  LF EM+  G+ P+ I    +L+  +  G    A 
Sbjct: 404 LKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRTGTAK 463

Query: 241 ELQNEMMGRG 250
           E   +++  G
Sbjct: 464 EFYVQIIKSG 473



 Score = 73.2 bits (178), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 96/232 (41%), Gaps = 38/232 (16%)

Query: 58  AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR-MPDFGLHPNVA 116
           AG      + L  ++     V  + F  L+ GLC      +A+D   R M + G  PNV 
Sbjct: 103 AGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVF 162

Query: 117 VYTALIDGLCKKN------------------CI-------------------ERARNLFD 139
            +T ++ GLC +N                  C+                   ++A   + 
Sbjct: 163 SHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYR 222

Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
           EM  R ++P+   Y+++I    K ++  +A+ + +RM + GV  +   YTSLV G    G
Sbjct: 223 EMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSG 282

Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
            L EA     +M   G+ P+ +   S +    + G   EA ++   M+ RGL
Sbjct: 283 QLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGL 334



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 93/197 (47%), Gaps = 6/197 (3%)

Query: 61  PSEALSLLDEMLD---SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
           P+ A+S  + M     S +  TV T+ +LI   C +G +       G +   G      +
Sbjct: 68  PAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPII 127

Query: 118 YTALIDGLCKKNCIERARNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           +  L+ GLC     + A ++    M +   +P+  ++T ++ G       +EAL L + M
Sbjct: 128 FNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMM 187

Query: 177 TEVGVDL--DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
            + G     ++ +Y+++  GL + G   +A   + EM+ R ILP+ +   S++    +  
Sbjct: 188 ADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQ 247

Query: 235 NMDEAIELQNEMMGRGL 251
            MD+A+E+ + M+  G+
Sbjct: 248 AMDKAMEVHDRMVKNGV 264



 Score = 45.4 bits (106), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 8/210 (3%)

Query: 50  TLMD-AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD 108
           T+ D A   +G   +AL + DE+L   I   + +    +  + +      A+  F RM  
Sbjct: 22  TIQDRARVGSGGAEDALDVFDELLRRGIGAPIRSLNGALADVARDNPA-AAVSRFNRMAR 80

Query: 109 FG---LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
            G   + P V  Y  LI   C    ++        + K+    +   +  L+ G    + 
Sbjct: 81  AGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKR 140

Query: 166 FKEALNLKNR-MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI--GRGILPDEIL 222
             +A+++  R MTE+G   ++ ++T ++ GL      QEA  L H M   G G LP+ + 
Sbjct: 141 TDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVS 200

Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             ++     + G+ D+A     EM+ R +L
Sbjct: 201 YSTVTDGLLKGGDPDKAYATYREMLDRRIL 230


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 122/246 (49%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           ++ D+  Y T++ G   +        LL  M  NG+  +  +   L+ AY K G+  EA+
Sbjct: 302 LEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAM 361

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            +  +M    +    VT+  +I  LCKSG V +A+ YF +M D GL P   VY +LI GL
Sbjct: 362 LVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGL 421

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           C  N  ERA  L  EM  R +  +T  + ++ID + K     E+  L + M  +GV  D+
Sbjct: 422 CTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 481

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y++L+ G    G + EA  L   M+  G+ P+ +   +L+  + +   M +A+ L  E
Sbjct: 482 ITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKE 541

Query: 246 MMGRGL 251
           M   G+
Sbjct: 542 MESSGV 547



 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 104/200 (52%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y ++I GLC  +K+E ++ L+ EM + G+  NT+   +++D++ K G   E+  L D M
Sbjct: 413 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 472

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++  ++T+  LIDG C +G + EA+     M   GL PN   Y  LI+G CK + +
Sbjct: 473 VRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRM 532

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A  LF EM    + PD   Y  ++ G  +      A  L  R+TE G  ++L+ Y  +
Sbjct: 533 GDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 592

Query: 192 VWGLSRCGHLQEARVLFHEM 211
           + GL +     +A  +F  +
Sbjct: 593 LHGLCKNKLTDDALRMFQNL 612



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 5/256 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + I  D+  Y +II  LC     + +  +L+ M +NG+  N    T++M  Y  +G+
Sbjct: 222 MLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQ 281

Query: 61  PSEALSLLDEMLDSRI-----EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNV 115
           P EA+  L ++    +     E  + T+C L+ G    G +         M   G+HP+ 
Sbjct: 282 PKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDH 341

Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
            VY  LI    K+  ++ A  +F +M ++ + PD   Y A+I    K    ++A+    +
Sbjct: 342 YVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQ 401

Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
           M + G+      Y SL+ GL  C   + A  L  EM+ RGI  + I   S++  H + G 
Sbjct: 402 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 461

Query: 236 MDEAIELQNEMMGRGL 251
           + E+ +L + M+  G+
Sbjct: 462 VIESEKLFDLMVRIGV 477



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 97/208 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ + +  D   YG +I  LC   + ED+ L   +M + GL+   ++  +L+       +
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 426

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+ EMLD  I +  + F  +ID  CK G V E+   F  M   G+ P++  Y+ 
Sbjct: 427 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 486

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG C    ++ A  L   M    + P+T  Y  LI+GY K     +AL L   M   G
Sbjct: 487 LIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSG 546

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
           V  D+  Y  ++ GL +      A+ L+
Sbjct: 547 VSPDIITYNIILQGLFQTRRTAAAKELY 574



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 128/280 (45%), Gaps = 45/280 (16%)

Query: 16  IIWGLCIESKFEDS---KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           ++ GLC E++ +++     ++++ +  G   + V  TT+++ +FK G+  +A S   EML
Sbjct: 164 LLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEML 223

Query: 73  DSRIEVTVVTFCVLIDGLCK-----------------------------------SGLVR 97
           D RI   VVT+  +I  LCK                                   SG  +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPK 283

Query: 98  EAIDYFGRM------PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           EAI +  ++      PD GL P++A Y  L+ G   K  +     L D M +  + PD  
Sbjct: 284 EAIGFLKKVRSDGVEPD-GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHY 342

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  LI  Y K     EA+ + ++M + G++ D   Y +++  L + G +++A + F +M
Sbjct: 343 VYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQM 402

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           I  G+ P  I+  SL+         + A EL  EM+ RG+
Sbjct: 403 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 442



 Score = 85.9 bits (211), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 109/234 (46%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           +K D+  Y T+I G C+  K +++  LLS M   GL  NTV   TL++ Y K     +AL
Sbjct: 477 VKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDAL 536

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            L  EM  S +   ++T+ +++ GL ++     A + + R+ + G    ++ Y  ++ GL
Sbjct: 537 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 596

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK    + A  +F  +   D+  +   +  +ID  LK     EA +L    +  G+  + 
Sbjct: 597 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNY 656

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
             Y  +   +   G L+E   LF  M   G   D  +   ++++  +RG +  A
Sbjct: 657 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 710



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 100/208 (48%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
            + +II   C E +  +S+ L   M   G+  + +  +TL+D Y  AG+  EA+ LL  M
Sbjct: 448 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGM 507

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
           +   ++   VT+  LI+G CK   + +A+  F  M   G+ P++  Y  ++ GL +    
Sbjct: 508 VSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 567

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
             A+ L+  + +     + + Y  ++ G  K++   +AL +   +  + + L+   +  +
Sbjct: 568 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIM 627

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPD 219
           +  L + G   EA+ LF      G++P+
Sbjct: 628 IDALLKVGRNGEAKDLFVAFSSNGLVPN 655



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 7/205 (3%)

Query: 60  EPSEALSLLDEMLDS---RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
            P+ A+S  + M  +   ++  TV T+ +LI   C++  +       G +   G      
Sbjct: 64  SPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAI 123

Query: 117 VYTALIDGLCKKNCIERARNL-FDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
            +T L+ GLC       A ++    M +   +PD  + T L+ G       +EAL L + 
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHM 183

Query: 176 MTE---VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
           M +    G   D+ +YT+++ G  + G   +A   +HEM+ R I PD +   S++    +
Sbjct: 184 MADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243

Query: 233 RGNMDEAIELQNEMMGRGLLSGSKN 257
              MD+A+E+   M+  G++   + 
Sbjct: 244 GQAMDKAMEVLTSMVKNGVMPNCRT 268



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 89/204 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    +K +   Y T+I G C  S+  D+ +L  EM+ +G++ + +    ++   F+   
Sbjct: 507 MVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 566

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            + A  L   + +S  ++ + T+ +++ GLCK+ L  +A+  F  +    L      +  
Sbjct: 567 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 626

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +ID L K      A++LF       ++P+   Y  + +  +     +E   L   M + G
Sbjct: 627 MIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 686

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
             +D      +V  L + G +  A
Sbjct: 687 CTVDSGMLNFIVRELLQRGEITRA 710


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 6/250 (2%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKL---LLSEMKENGLTANTVICTTLMDAYFKAGE 60
           K +  D+  +  +I  LC   K  D  L   L  EMK +G T + V    L+D     G+
Sbjct: 401 KGLSPDVYTFNILINALC---KVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGK 457

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL LL+EM  +    + VT+  +ID LCK   + EA + F +M   G+  +   +  
Sbjct: 458 LGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNT 517

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   I+ A  L ++M K  + P+   Y +++  Y K  + K+A ++   MT  G
Sbjct: 518 LIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANG 577

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            ++D+  Y +L+ GL + G  Q A  L   M  +GI P       +++  + R N+ +A+
Sbjct: 578 FEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDAL 637

Query: 241 ELQNEMMGRG 250
            L  EM   G
Sbjct: 638 NLFREMTEVG 647



 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 35/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+ I+ D+    T+I  LC   +   + L+L EM  +G+  +    TTLM  + + G 
Sbjct: 188 MTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGS 247

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL +  +M+++    T VT  VLI+G CK G V +A+ Y  +    G  P+   Y  
Sbjct: 248 IEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNT 307

Query: 121 LIDGLCKK-----------------------------NCIER------ARNLFDEMPKRD 145
            + GLC+                              NC+ +      A+ + ++M  R 
Sbjct: 308 FVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 367

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
            +PDTT +  LI         +EAL+L   +T  G+  D+  +  L+  L + G      
Sbjct: 368 CLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 427

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            LF EM   G  PDE+    L+      G +  A++L NEM   G
Sbjct: 428 RLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 3/254 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      D   Y  +I  LC   K  ++  LL+EM+ NG   +TV   T++DA  K   
Sbjct: 433 MKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMR 492

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + D+M    I  + VTF  LIDGLCK+  + +A +   +M   GL PN   Y +
Sbjct: 493 IEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS 552

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++   CK+  I++A ++ + M       D   Y  LI+G  K    + AL L   M   G
Sbjct: 553 ILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 612

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN--MDE 238
           +     AY  ++  L R  +L++A  LF EM   G  PD  L   ++ +   RG   + E
Sbjct: 613 IRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDA-LTYKIVFRSLCRGGGPIKE 671

Query: 239 AIELQNEMMGRGLL 252
           A +   EM+ +G +
Sbjct: 672 AFDFLVEMVNKGFM 685



 Score = 99.0 bits (245), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 111/243 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y T+I  L    + +++K ++++M + G   +T    TL+ A        EAL L 
Sbjct: 336 DVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLA 395

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
            E+    +   V TF +LI+ LCK G     I  F  M   G  P+   Y  LID LC  
Sbjct: 396 RELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSM 455

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             +  A +L +EM        T  Y  +ID   K    +EA  + ++M   G+      +
Sbjct: 456 GKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTF 515

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ GL +   + +A  L  +M+  G+ P+ I   S+L  + ++GN+ +A ++   M  
Sbjct: 516 NTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTA 575

Query: 249 RGL 251
            G 
Sbjct: 576 NGF 578



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 105/246 (42%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            + D   Y T + GLC       +  ++  M + G   +     T+++   K GE  EA 
Sbjct: 298 FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAK 357

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
            ++++M+D        TF  LI  L     + EA+D    +   GL P+V  +  LI+ L
Sbjct: 358 GIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINAL 417

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
           CK         LF+EM      PD   Y  LID          AL+L N M   G     
Sbjct: 418 CKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRST 477

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y +++  L +   ++EA  +F +M  +GI    +   +L+    +   +D+A EL  +
Sbjct: 478 VTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQ 537

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 538 MVKEGL 543



 Score = 87.0 bits (214), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 3/231 (1%)

Query: 25  KFEDS-KLLLSEMKEN--GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV 81
           +F+D+  L+L+++  +  G+ A+TV+   L++   +  +     S+ +EM    I+  VV
Sbjct: 139 RFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVV 198

Query: 82  TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
           T   LI  LC++  VR A+     M   G+ P+   +T L+ G  ++  IE A  +  +M
Sbjct: 199 TLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKM 258

Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
            +    P       LI+GY K    ++AL    +    G + D   Y + V GL + GH+
Sbjct: 259 MEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHV 318

Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
             A  +   M+  G  PD     +++    + G +DEA  + N+M+ RG L
Sbjct: 319 SHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCL 369



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 112/242 (46%), Gaps = 3/242 (1%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y  I+  L     F+  + L+ EM+  G     V+  + +++Y +     +A+ L+   
Sbjct: 91  VYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQ 150

Query: 72  LDSR---IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           LD+    ++   V F  L++ L +   ++     +  M   G+ P+V     LI  LC+ 
Sbjct: 151 LDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRA 210

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
           + +  A  + +EM    + PD T +T L+ G+++  S + AL +K +M E G        
Sbjct: 211 HQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTV 270

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
             L+ G  + G +++A     + I  G  PD++   + +    + G++  A+++ + M+ 
Sbjct: 271 NVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQ 330

Query: 249 RG 250
            G
Sbjct: 331 EG 332



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 3/180 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D+  YGT+I GLC   + + +  LL  M+  G+         ++ + F+   
Sbjct: 573 MTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNN 632

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG-LVREAIDYFGRMPDFGLHPNVAVYT 119
             +AL+L  EM +       +T+ ++   LC+ G  ++EA D+   M + G  P  + + 
Sbjct: 633 LRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFR 692

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
            L +GL      +   +  + + ++    ++ A  + I GYLK   + +AL    R+ E+
Sbjct: 693 MLAEGLLNLGMDDYLISAIELIIEKAKFRESDA--SAIRGYLKIRKYYDALATFGRLLEI 750


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 117/252 (46%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K  + K ++  Y  +I G C E K   +++LL  M E GL  NT   TTL+  + K G 
Sbjct: 205 IKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGS 264

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              A  L+++M        + T+  +IDG CK G ++EA          GL  +   YT 
Sbjct: 265 FDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTI 324

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   CK+  I  A +LFD M +    PD  AYT+LI  Y +    +E+    ++   +G
Sbjct: 325 LITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIG 384

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +      YTS++ G  + G    A  +F  M+  G   D I   +L+    +   ++EA 
Sbjct: 385 LLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAK 444

Query: 241 ELQNEMMGRGLL 252
            L   M+ + L+
Sbjct: 445 ALYEGMLDKRLV 456



 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 113/240 (47%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           +G ++   C E K E+   LL+ M   G + +   CT ++ +  + G   +       ML
Sbjct: 76  FGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRML 135

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
           ++     VV +   IDGLCK   V++A      M   GL PNV  +T LIDGLCK    E
Sbjct: 136 ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTE 195

Query: 133 RARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           RA  LF ++ K     P+   YT +I GY +      A  L  RM E G+  + N YT+L
Sbjct: 196 RAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTL 255

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G  + G    A  L ++M   G LP+     +++    ++G + EA ++      +GL
Sbjct: 256 IGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGL 315



 Score =  117 bits (292), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 125/249 (50%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +K +   Y T+I G C    F+ +  L+++MK+ G   N      ++D + K G+
Sbjct: 240 MVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGK 299

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L       ++   +T+ +LI   CK G +  A+D F RM + G  P++  YT+
Sbjct: 300 IQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTS 359

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI   C++  +E ++  FD+     ++P    YT++I GY K      AL +  RM + G
Sbjct: 360 LISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNG 419

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              D   Y +L+ GL +   L+EA+ L+  M+ + ++P E+  ++L  ++  R     A+
Sbjct: 420 CFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTSIAV 479

Query: 241 ELQNEMMGR 249
            + + +  R
Sbjct: 480 SVLDRLDKR 488



 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAG 59
           M G+ +K ++  + T+I GLC     E + +L L  +K +    N    T ++  Y + G
Sbjct: 169 MVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREG 228

Query: 60  EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
           + + A  LL  M++  ++    T+  LI G CK G    A +   +M   G  PN+  Y 
Sbjct: 229 KLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYN 288

Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           A+IDG CKK  I+ A  +      + +  D   YT LI  + K      AL+L +RM E 
Sbjct: 289 AVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN 348

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G   D+ AYTSL+    +   ++E++  F + +  G+LP +    S++  + + G    A
Sbjct: 349 GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLA 408

Query: 240 IELQNEMMGRGLLSGS 255
           + +   M+  G  + S
Sbjct: 409 LRVFERMVQNGCFADS 424



 Score = 68.6 bits (166), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 95/254 (37%), Gaps = 36/254 (14%)

Query: 35  EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
           EM+ +GL         ++    + G    A  + D M  + +      F  L+   C+ G
Sbjct: 28  EMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVSPMNRGFGALVVVCCREG 87

Query: 95  LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
            V E       M  +G   + A  T ++  LC+K   +     F  M +    P+   YT
Sbjct: 88  KVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYT 147

Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV-------W-------------- 193
           A IDG  K    K+A ++   M   G+  ++  +T+L+       W              
Sbjct: 148 AWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKS 207

Query: 194 ---------------GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
                          G  R G L  A +L   M+ +G+ P+     +L+  H + G+ D 
Sbjct: 208 SSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDR 267

Query: 239 AIELQNEMMGRGLL 252
           A EL N+M   G L
Sbjct: 268 AFELMNKMKQEGFL 281



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 60/139 (43%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I   C + + E+S+    +    GL       T+++  Y K G  + AL + 
Sbjct: 353 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVF 412

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
           + M+ +      +T+  LI GLCK   + EA   +  M D  L P       L    C++
Sbjct: 413 ERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRR 472

Query: 129 NCIERARNLFDEMPKRDMI 147
                A ++ D + KR  +
Sbjct: 473 EKTSIAVSVLDRLDKRQQV 491


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 36/251 (14%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  K I  +  +Y  I+ GLC   + +D   LL+ MK +G   +++ C  L+D + K G+
Sbjct: 227 MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQ 286

Query: 61  PSEALSLLD-----------------------------------EMLDSRIEVTVVTFCV 85
             EA +LL                                    +M  + IE  VV + +
Sbjct: 287 IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTI 346

Query: 86  LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
           LI G C+ G+V  A++    M   GL P+   Y ALI G C    +++AR+L  E+ K D
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P +  YT LI G  ++    EA  + N+M  +G    +  + +L+ GL + G L+EAR
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466

Query: 206 VLFHEM-IGRG 215
            LF++M IG+ 
Sbjct: 467 HLFYKMEIGKN 477



 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 114/251 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +K  NI+   P +  +I         E +     +MK+ G   +     +++    +   
Sbjct: 122 LKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEV 181

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL++ ++ML         TF +L++GLCK+G   +A+  F  M   G+ PN  +YT 
Sbjct: 182 FLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTI 241

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ GLC+    +    L + M      PD+    AL+DG+ K     EA  L     + G
Sbjct: 242 ILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEG 301

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
             L +  Y+SL+ GL R     E +    +M   GI PD +L   L++   E G +D A+
Sbjct: 302 YVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYAL 361

Query: 241 ELQNEMMGRGL 251
            + N+M  RGL
Sbjct: 362 NMLNDMTQRGL 372



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 98/190 (51%)

Query: 67  LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
           +L+E+ +S I++   TF VLI    KSG+  +A++ FG+M DFG  P+V  Y +++  + 
Sbjct: 118 ILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMV 177

Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
           +K     A  ++++M K +  P+   +  L++G  K+    +AL + + MT+ G+  +  
Sbjct: 178 QKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTM 237

Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
            YT ++ GL +     +   L + M   G  PD I C +LL    + G +DEA  L    
Sbjct: 238 IYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLF 297

Query: 247 MGRGLLSGSK 256
              G + G K
Sbjct: 298 EKEGYVLGIK 307



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 35/277 (12%)

Query: 5   NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
           N   +   +  ++ GLC   K +D+  +  EM + G+  NT+I T ++    +A    + 
Sbjct: 196 NYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDV 255

Query: 65  LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI------------------------ 100
             LL+ M  S      +T   L+DG CK G + EA                         
Sbjct: 256 HRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDG 315

Query: 101 -----------DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
                      ++  +M   G+ P+V +YT LI G C+   ++ A N+ ++M +R + PD
Sbjct: 316 LFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPD 375

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
           T  Y ALI G+       +A +L+  +++         YT L+ G+ R G L EAR +F+
Sbjct: 376 TYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFN 435

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +M   G  P  +   +L+    + G ++EA  L  +M
Sbjct: 436 QMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 20/254 (7%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           I+ D+ LY  +I G C     + +  +L++M + GL+ +T     L+  +   G   +A 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           SL  E+  +    T  T+ +LI G+C++GL+ EA   F +M + G  P++  + ALIDGL
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456

Query: 126 CKKNCIERARNLFDEM-------------PKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
           CK   +E AR+LF +M                D + DT       +G+ + +  ++A  +
Sbjct: 457 CKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTA------NGFHRVDREEDAFRV 510

Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
            ++M + G       Y  L+    R G L  A  L+ + + R +   E   + L ++H+E
Sbjct: 511 LDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL-RSLPSQEDETLKLAEEHFE 569

Query: 233 RGNMDEAIELQNEM 246
           +G +++A+    EM
Sbjct: 570 KGELEKAVRCLLEM 583



 Score = 90.9 bits (224), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 111/246 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK    K D+  Y +I+  +  +  F  +  + ++M +     N      L++   K G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL + DEM    I    + + +++ GLC++    +       M   G  P+     A
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+DG CK   I+ A  L     K   +     Y++LIDG  + + + E      +M + G
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           ++ D+  YT L+ G    G +  A  + ++M  RG+ PD     +L+K   + G +D+A 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 241 ELQNEM 246
            LQ E+
Sbjct: 397 SLQLEI 402



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 6/149 (4%)

Query: 51  LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
           L + +F+ GE  +A+  L EM        +  + + + GLC++    EA+  F  + +  
Sbjct: 563 LAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQ 622

Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
           +  N      LI+GLCK   +E A ++F    ++  +        L+   +  +  K AL
Sbjct: 623 MDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHAL 682

Query: 171 NLKNRMTEVGVDLD------LNAYTSLVW 193
           +L NRM   G DLD      + +Y   VW
Sbjct: 683 DLLNRMNSAGYDLDEYLHHRIKSYLLSVW 711



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/326 (21%), Positives = 122/326 (37%), Gaps = 76/326 (23%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  + +  D   Y  +I G C     + ++ L  E+ +N     +   T L+    + G 
Sbjct: 367 MTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGL 426

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYF-----GRMPDF------ 109
             EA  + ++M +     +++TF  LIDGLCK+G + EA   F     G+ P        
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQ 486

Query: 110 ----------GLH---------------------PNVAVYTALIDGLCKKNCIERARNLF 138
                     G H                     P+ AVY  L+   C+K  +  A +L+
Sbjct: 487 GADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLW 546

Query: 139 -----------DEMPK---------------RDMIP--------DTTAYTALIDGYLKHE 164
                      DE  K               R ++         +   YT  + G  +  
Sbjct: 547 LKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQAR 606

Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
             +EAL +   + E  +D++  +   L+ GL + G+L+ A  +F   + +G +    +C 
Sbjct: 607 RSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICN 666

Query: 225 SLLKKHYERGNMDEAIELQNEMMGRG 250
            LL+    +  M  A++L N M   G
Sbjct: 667 QLLRSLILQDKMKHALDLLNRMNSAG 692


>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
 gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 855

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 123/246 (50%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
            K D   Y T++  L    +F +   LL EM  +G   NTV    L+ +Y +A    EA+
Sbjct: 355 FKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAM 414

Query: 66  SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
           ++ ++M ++  E   VT+C LID   K+G +  A+D + RM + GL P+   Y+ +I+ L
Sbjct: 415 NVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCL 474

Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
            K   +  A  LF EM  +   P+   +  +I  + K  +++ AL L   M   G   D 
Sbjct: 475 GKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDK 534

Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
             Y+ ++  L  CG L+EA  +F EM  +  +PDE +   L+    + GN+D+A +    
Sbjct: 535 VTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQA 594

Query: 246 MMGRGL 251
           M+  GL
Sbjct: 595 MLQAGL 600



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 85/188 (45%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +   M+E GL+ +T   + +++   KAG    A  L  EM+       +VTF ++I    
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           K+     A+  +  M + G  P+   Y+ +++ L     +E A  +F EM +++ +PD  
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 570

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  L+D + K  +  +A      M + G+  ++    SL+    R   + EA  L   M
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630

Query: 212 IGRGILPD 219
           +  G+ P 
Sbjct: 631 LALGLHPS 638



 Score = 45.1 bits (105), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 63/158 (39%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M G+    +L  +  +I        +E +  L  +M+  G   + V  + +M+     G 
Sbjct: 490 MVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF 549

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +  EM           + +L+D   K+G V +A  ++  M   GL PNV    +
Sbjct: 550 LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNS 609

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
           L+    + + +  A NL   M    + P    YT L+ 
Sbjct: 610 LLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647



 Score = 43.9 bits (102), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 6/139 (4%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    + D   Y  ++  L      E+++ + +EM+      +  +   L+D + KAG 
Sbjct: 525 MQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN 584

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A      ML + +   V T   L+    +   + EA +    M   GLHP++  YT 
Sbjct: 585 VDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTL 644

Query: 121 LIDGLCKKNCIERARNLFD 139
           L+      +C   AR+ FD
Sbjct: 645 LL------SCCTDARSNFD 657


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 124/252 (49%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+   I  D  +   ++       K + +K  L+E+   G+  +  +   L++   K   
Sbjct: 135 MRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNL 194

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ L  E L+      V +F +LI GLC+ G + +A ++F  M +FG  P++  Y  
Sbjct: 195 VDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNT 254

Query: 121 LIDGLCKKNCIERARNLFDE-MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
           LI+G C+ N I +  +L  E M  + + PD   YT++I GY K    K A  L + M   
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314

Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
           G+  +   +  L+ G  + G+++ A V++ +M+  G LPD +   SL+  +   G +++ 
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 374

Query: 240 IELQNEMMGRGL 251
           ++L  EM  R L
Sbjct: 375 LKLWEEMKVRNL 386



 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 115/246 (46%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K +  D+  Y +II G C     + +  L  EM  +G+  N      L+D + K G    
Sbjct: 279 KGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRS 338

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
           A+ + ++ML       VVTF  LIDG C+ G V + +  +  M    L PNV  Y  LI+
Sbjct: 339 AMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLIN 398

Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
            LCK+N I  ARN    +   +++P    Y  +IDG+ K     EA  +   M E     
Sbjct: 399 ALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRP 458

Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
           D   +T L+ G    G + EA   F++MI    +PDEI   SL+    + G  +EA +++
Sbjct: 459 DKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIK 518

Query: 244 NEMMGR 249
              + +
Sbjct: 519 QAALQK 524



 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 118/240 (49%), Gaps = 1/240 (0%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSE-MKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
           D+  Y T+I G C  ++      LL E M   G++ + +  T+++  Y K G+   A  L
Sbjct: 248 DIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASEL 307

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
            DEM+ S I+    TF VLIDG  K G +R A+  + +M   G  P+V  +T+LIDG C+
Sbjct: 308 FDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCR 367

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
           +  + +   L++EM  R++ P+   Y  LI+   K    +EA N    +    V      
Sbjct: 368 EGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFI 427

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  ++ G  + G + EA  +  EM  +   PD+I    L+  +  +G M EAI    +M+
Sbjct: 428 YNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMI 487



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 1/241 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y  ++  LC     + +K++   M+ +G+  ++ I   L+ +Y + G+   A + L+E+ 
Sbjct: 112 YDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVH 171

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
              I+V+   +  L++ L K  LV EA+  F    +    P+V  +  LI GLC+   I+
Sbjct: 172 CYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEID 231

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN-LKNRMTEVGVDLDLNAYTSL 191
           +A   F  M      PD  +Y  LI+G+ +     +  + LK  M   GV  D+  YTS+
Sbjct: 232 KAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSI 291

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
           + G  + G ++ A  LF EM+  GI P++     L+    + GNM  A+ +  +M+  G 
Sbjct: 292 ISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGC 351

Query: 252 L 252
           L
Sbjct: 352 L 352



 Score = 83.2 bits (204), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 92/204 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M    IK +   +  +I G         + ++  +M   G   + V  T+L+D Y + GE
Sbjct: 311 MVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGE 370

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            ++ L L +EM    +   V T+ VLI+ LCK   +REA ++   +    + P   +Y  
Sbjct: 371 VNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNP 430

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +IDG CK   ++ A  +  EM ++   PD   +T LI G        EA++   +M E+ 
Sbjct: 431 VIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEIN 490

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
              D     SL+  L + G   EA
Sbjct: 491 CVPDEITINSLISCLLKAGMPNEA 514



 Score = 37.0 bits (84), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 35/75 (46%)

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
           T + ++   N Y  L+  L + G    A+++F  M   GILPD  +   L+  +   G +
Sbjct: 101 THLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKL 160

Query: 237 DEAIELQNEMMGRGL 251
           D A    NE+   G+
Sbjct: 161 DSAKNFLNEVHCYGI 175


>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g65820
 gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 125/249 (50%)

Query: 8   ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
            +L  + ++++G C   K  ++K +L +M E G   + V  T L+  Y  AG+ ++A  L
Sbjct: 250 VNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDL 309

Query: 68  LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
           L +M     E     + VLI  LCK   + EA+  F  M  +    +V  YTAL+ G CK
Sbjct: 310 LRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCK 369

Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
              I++   + D+M K+ ++P    Y  ++  + K ESF+E L L  +M ++    D+  
Sbjct: 370 WGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGI 429

Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
           Y  ++    + G ++EA  L++EM   G+ P     + ++     +G + EA +   EM+
Sbjct: 430 YNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMV 489

Query: 248 GRGLLSGSK 256
            RGL S S+
Sbjct: 490 TRGLFSVSQ 498



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 1/215 (0%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L EM + G   +  +   L+DA  K G   +A  L ++M   R  V +  F  L+ G C
Sbjct: 205 VLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWC 263

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           + G + EA     +M + G  P++  YT L+ G      +  A +L  +M +R   P+  
Sbjct: 264 RVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN 323

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            YT LI    K +  +EA+ +   M     + D+  YT+LV G  + G + +  ++  +M
Sbjct: 324 CYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDM 383

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           I +G++P E+  + ++  H ++ + +E +EL  +M
Sbjct: 384 IKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM 418



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 94/217 (43%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D+  Y  ++ G     K  D+  LL +M+  G   N    T L+ A  K   
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA+ +  EM     E  VVT+  L+ G CK G + +       M   GL P+   Y  
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 397

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++    KK   E    L ++M + +  PD   Y  +I    K    KEA+ L N M E G
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 457

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
           +   ++ +  ++ GL+  G L EA   F EM+ RG+ 
Sbjct: 458 LSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLF 494



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 1/164 (0%)

Query: 83  FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
           F VL+     + +V++AI+    MP FG  P+  V+  L+D LCK   ++ A  LF++M 
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245

Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
            R  + +   +T+L+ G+ +     EA  +  +M E G + D+  YT+L+ G +  G + 
Sbjct: 246 MRFPV-NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304

Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           +A  L  +M  RG  P+      L++   +   M+EA+++  EM
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM 348



 Score = 67.0 bits (162), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 1/135 (0%)

Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
           ++  L+      + +++A  + DEMPK    PD   +  L+D   KH S K+A  L   M
Sbjct: 185 LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM 244

Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
             +   ++L  +TSL++G  R G + EA+ +  +M   G  PD +   +LL  +   G M
Sbjct: 245 -RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKM 303

Query: 237 DEAIELQNEMMGRGL 251
            +A +L  +M  RG 
Sbjct: 304 ADAYDLLRDMRRRGF 318


>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
 gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 5/255 (1%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           ++GK  KAD+  Y  I  G C+  +   +  +L EM E GLT        L+  YF+AG+
Sbjct: 209 LRGK-FKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQ 267

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA     +M +  +E+ VVT+  ++ G    G ++ A   F  M   G+ P+ A Y A
Sbjct: 268 LKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNA 327

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           +I  LCKK+ +E A  +F+EM K+  +P+ T Y  +I G     +  +A+    RM   G
Sbjct: 328 MIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDG 387

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + ++  Y   +      G +++   +F +M G+G LP+      L+   + R   ++ +
Sbjct: 388 CEPNVQTYNVAIRYFCDAGDVEKGLSMFEKM-GQGSLPNLDTYNVLISAMFVRKKSEDLV 446

Query: 241 ---ELQNEMMGRGLL 252
              +L  EM+ RG +
Sbjct: 447 VAGKLLLEMVDRGFI 461



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 109/221 (49%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           L++ M+   +  ++     + + +  AG+P  A+ +   M +      + +F  ++D LC
Sbjct: 134 LVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILC 193

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           KS  V  A +   ++       +V  Y  + +G C      +A  +  EM +R + P  T
Sbjct: 194 KSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTIT 253

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y  L+ GY +    KEA     +M E  V++D+  YT++V G    G ++ AR +F+EM
Sbjct: 254 TYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEM 313

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
           +G GILP      ++++   ++ +++ A+ +  EM+ +G +
Sbjct: 314 VGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYV 354



 Score = 87.4 bits (215), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 121/252 (48%), Gaps = 1/252 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+      DL  + TI+  LC   + E +   L ++      A+ V    + + +     
Sbjct: 173 MREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKR 232

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +AL +L EM++  +  T+ T+ +L+ G  ++G ++EA ++F +M +  +  +V  YT 
Sbjct: 233 TPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTT 292

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++ G      I+RAR +F+EM    ++P T  Y A+I    K +S + A+ +   M + G
Sbjct: 293 MVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKG 352

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +L  Y  ++ GL   G++ +A      M   G  P+       ++   + G++++ +
Sbjct: 353 YVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGL 412

Query: 241 ELQNEMMGRGLL 252
            +  E MG+G L
Sbjct: 413 SM-FEKMGQGSL 423


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 116/227 (51%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK K++   +  YG+I+ GL    + +++ +L  E K  G+  N ++ ++L+D + K G 
Sbjct: 621 MKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGR 680

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  +L+EM+   +   V T+  L+D L K+  + EA+  F  M +    PN   Y+ 
Sbjct: 681 IDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSI 740

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI+GLC+     +A   + EM K+ +IP+   YT +I G  K  +  +A +L  R    G
Sbjct: 741 LINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNG 800

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
              D  ++ +L+ G+S      EA  +F E   RG   +   CISLL
Sbjct: 801 GIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLL 847



 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 114/229 (49%)

Query: 12  LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
           +Y ++I    +  + ED   +  EM   G   +  +  T MD  FKAGE  +  ++ ++M
Sbjct: 492 IYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDM 551

Query: 72  LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
                   V ++ +LI GL K+G  RE  + F  M   G   +   Y A++DGLCK   +
Sbjct: 552 KSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKV 611

Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
           ++A  + +EM  + + P    Y +++DG  K +   EA  L       G++L++  Y+SL
Sbjct: 612 DKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSL 671

Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           + G  + G + EA ++  EM+ +G+ P+     SL+    +   +DEA+
Sbjct: 672 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEAL 720



 Score =  107 bits (266), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 116/240 (48%), Gaps = 1/240 (0%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I G     +F+D+  LL  ++E G   + V   +++    K  +  EAL+L D M 
Sbjct: 319 YNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM- 377

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               +  + T+ ++ID LC +G V EA      M   GL PN+     ++D LCK N +E
Sbjct: 378 KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLE 437

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +F+   +R   P++  Y +LIDG  K     +A  L  +M + G D +   YTSL+
Sbjct: 438 EAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLI 497

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
                 G  ++   ++ EMI RG  PD  L  + +   ++ G +++   +  +M   G L
Sbjct: 498 RNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFL 557



 Score =  103 bits (257), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 116/242 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           MK      D+  Y  +I GL    +  ++  +   M + G   +      ++D   K+G+
Sbjct: 551 MKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGK 610

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             +A  +L+EM    +  TV T+  ++DGL K   + EA   F      G+  NV +Y++
Sbjct: 611 VDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSS 670

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDG  K   I+ A  + +EM K+ + P+   + +L+D  +K E   EAL     M E+ 
Sbjct: 671 LIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMK 730

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
              +   Y+ L+ GL R     +A V + EM  +G++P+ +   +++    + GN+ +A 
Sbjct: 731 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAY 790

Query: 241 EL 242
            L
Sbjct: 791 SL 792



 Score =  101 bits (251), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 102/206 (49%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K K I+ ++ LY ++I G     + +++ L+L EM + GLT N     +LMDA  K  E 
Sbjct: 657 KSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEI 716

Query: 62  SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
            EAL     M + +      T+ +LI+GLC+     +A  ++  M   GL PNV  YT +
Sbjct: 717 DEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTM 776

Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
           I GL K   I  A +LF+       IPD+ ++ ALI+G        EA  +       G 
Sbjct: 777 ISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGC 836

Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVL 207
            L++    SL+  L++   L++A ++
Sbjct: 837 RLNVKTCISLLDALNKTECLEQAAIV 862



 Score =  100 bits (250), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 113/250 (45%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M  +    D   Y  ++ GLC   K + +  +L EMK   +        +++D   K   
Sbjct: 586 MSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDR 645

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  L +E     IE+ V+ +  LIDG  K G + EA      M   GL PNV  + +
Sbjct: 646 LDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 705

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+D L K   I+ A   F  M +    P+T  Y+ LI+G  + + + +A      M + G
Sbjct: 706 LMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQG 765

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
           +  ++  YT+++ GL++ G++ +A  LF      G +PD     +L++         EA 
Sbjct: 766 LIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAY 825

Query: 241 ELQNEMMGRG 250
           ++  E   RG
Sbjct: 826 QVFEETRLRG 835



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 129/318 (40%), Gaps = 70/318 (22%)

Query: 4   KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
           K+ K ++  Y  II  LC+  +  ++  +  EM+  GL  N +    ++D   KA +  E
Sbjct: 379 KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEE 438

Query: 64  ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI- 122
           A  + +   +       VT+C LIDGL K G + +A   F +M D G   N  +YT+LI 
Sbjct: 439 AHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIR 498

Query: 123 ----------------------------------DGLCKKNCIERARNLFDEMPKRDMIP 148
                                             D + K   +E+ R +F++M     +P
Sbjct: 499 NFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLP 558

Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG--------- 199
           D  +Y+ LI G  K    +E  N+   M++ G  LD  AY ++V GL + G         
Sbjct: 559 DVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVL 618

Query: 200 --------------------------HLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
                                      L EA +LF E   +GI  + IL  SL+    + 
Sbjct: 619 EEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKV 678

Query: 234 GNMDEAIELQNEMMGRGL 251
           G +DEA  +  EMM +GL
Sbjct: 679 GRIDEAYLILEEMMKKGL 696



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 125/260 (48%), Gaps = 17/260 (6%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    +     Y  +I  L    + E +  LL +M++ G   +  + TTL+ A  + G+
Sbjct: 167 MRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQ 226

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
              AL+L+DE+  S +E  +V + V ID   K+G V  A  +F  +   GL P+   YT+
Sbjct: 227 MEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTS 286

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           ++  LCK   +  A  LF +M     +P   AY  +I GY   E F +A  L  R+ E G
Sbjct: 287 MVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERG 346

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD--------EILCISLLKKHYE 232
               + ++ S++  L +   + EA  LF +++ +   P+        ++LC++       
Sbjct: 347 CIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNISTYNIIIDMLCMA------- 398

Query: 233 RGNMDEAIELQNEMMGRGLL 252
            G ++EA ++++EM   GL 
Sbjct: 399 -GRVNEAYKIRDEMELAGLF 417



 Score = 81.3 bits (199), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 36/285 (12%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+    +  +PL+ T++  L  E + E +  L+ E+K + L  + V+    +D + KAG 
Sbjct: 202 MQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGS 261

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFG---------------- 104
              A     E+    +    V++  ++  LCK+G + EA + FG                
Sbjct: 262 VDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNT 321

Query: 105 -------------------RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
                              R+ + G  P+V  + +++  L KK  ++ A  LFD M K+D
Sbjct: 322 MIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKD 380

Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
             P+ + Y  +ID         EA  +++ M   G+  +L +   +V  L +   L+EA 
Sbjct: 381 AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAH 440

Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            +F     RG  P+ +   SL+    ++G +D+A  L  +M+  G
Sbjct: 441 RIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAG 485



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 7/237 (2%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + +I+  L  + K +++  L   MK++    N      ++D    AG  +EA  + DEM 
Sbjct: 354 FNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEME 412

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
            + +   +++  +++D LCK+  + EA   F    + G +PN   Y +LIDGL KK  I+
Sbjct: 413 LAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKID 472

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF++M       +   YT+LI  +  H   ++   +   M   G   DL    + +
Sbjct: 473 DAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYM 532

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPD----EILCISLLK--KHYERGNMDEAIELQ 243
             + + G +++ R +F +M   G LPD     IL   L K  +  E  N+ +A+  Q
Sbjct: 533 DCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQ 589



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 93/219 (42%)

Query: 32  LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
           +L EM   G       C  L+    ++    +A  ++  M   +       + VLI  L 
Sbjct: 128 VLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALA 187

Query: 92  KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
           ++     A++   +M D G   +V ++T L+  L ++  +E A  L DE+    + PD  
Sbjct: 188 EARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIV 247

Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
            Y   ID + K  S   A    + +   G+  D  +YTS+VW L + G L EA  LF +M
Sbjct: 248 LYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQM 307

Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
                +P      +++  +      D+A +L   +  RG
Sbjct: 308 EAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERG 346


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  117 bits (292), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 125/277 (45%), Gaps = 36/277 (12%)

Query: 6   IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
           IK D+  +  +I  LC   +   + L+L +M   GL  +    TT+M  Y + G+   AL
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244

Query: 66  SLLDEMLD-----SRIEVTVV-------------------------------TFCVLIDG 89
            + ++M++     S + V V+                               TF  L++G
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304

Query: 90  LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
           LCK+G V+ AI+    M   G  P+V  Y ++I GLCK   ++ A  + D+M  RD  P+
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364

Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
           T  Y  LI    K    +EA  L   +T  G+  D+  + SL+ GL    + + A  LF 
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424

Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
           EM  +G  PDE     L+     +G +DEA+ +  +M
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461



 Score =  116 bits (291), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 118/247 (47%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           +  K I  D+  + ++I GLC+      +  L  EM+  G   +      L+D+    G+
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EAL++L +M  S    +V+T+  LIDG CK+   REA + F  M   G+  N   Y  
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LIDGLCK   +E A  L D+M      PD   Y +L+  + +    K+A ++   MT  G
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
            + D+  Y +L+ GL + G ++ A  L   +  +GI         +++  + +    EAI
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630

Query: 241 ELQNEMM 247
            L  EM+
Sbjct: 631 NLFREML 637



 Score =  102 bits (253), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 2/254 (0%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M+ K  + D   Y  +I  LC + K +++  +L +M+ +G   + +   TL+D + KA +
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485

Query: 61  PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
             EA  + DEM    +    VT+  LIDGLCKS  V +A     +M   G  P+   Y +
Sbjct: 486 TREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNS 545

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           L+   C+   I++A ++   M      PD   Y  LI G  K    + A  L   +   G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN--MDE 238
           ++L  +AY  ++ GL R     EA  LF EM+ +   P + +   ++ +    G   + E
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIRE 665

Query: 239 AIELQNEMMGRGLL 252
           A++   E++ +G +
Sbjct: 666 AVDFLVELLEKGFV 679



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 110/241 (45%), Gaps = 1/241 (0%)

Query: 16  IIWGLCIESKFEDSKLLLSEMK-ENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
           I+ G C E + ED+   + EM  ++G   +     TL++   KAG    A+ ++D ML  
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 75  RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
             +  V T+  +I GLCK G V+EA++   +M      PN   Y  LI  LCK+N +E A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
             L   +  + ++PD   + +LI G     + + A+ L   M   G + D   Y  L+  
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444

Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSG 254
           L   G L EA  +  +M   G     I   +L+    +     EA E+ +EM   G+   
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504

Query: 255 S 255
           S
Sbjct: 505 S 505



 Score =  100 bits (249), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 110/242 (45%)

Query: 9   DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
           D+  Y ++I GLC   + +++  +L +M     + NTV   TL+    K  +  EA  L 
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388

Query: 69  DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
             +    I   V TF  LI GLC +   R A++ F  M   G  P+   Y  LID LC K
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448

Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
             ++ A N+  +M           Y  LIDG+ K    +EA  + + M   GV  +   Y
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508

Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
            +L+ GL +   +++A  L  +MI  G  PD+    SLL      G++ +A ++   M  
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568

Query: 249 RG 250
            G
Sbjct: 569 NG 570



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 108/239 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           Y T+I  LC E++ E++  L   +   G+  +     +L+           A+ L +EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
               E    T+ +LID LC  G + EA++   +M   G   +V  Y  LIDG CK N   
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  +FDEM    +  ++  Y  LIDG  K    ++A  L ++M   G   D   Y SL+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
               R G +++A  +   M   G  PD +   +L+    + G ++ A +L   +  +G+
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606



 Score = 97.1 bits (240), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 109/238 (45%)

Query: 13  YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
           + T++ GLC     + +  ++  M + G   +     +++    K GE  EA+ +LD+M+
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357

Query: 73  DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
                   VT+  LI  LCK   V EA +    +   G+ P+V  + +LI GLC      
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417

Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
            A  LF+EM  +   PD   Y  LID         EALN+  +M   G    +  Y +L+
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477

Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
            G  +    +EA  +F EM   G+  + +   +L+    +   +++A +L ++M+  G
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535



 Score = 86.7 bits (213), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 118/251 (47%), Gaps = 2/251 (0%)

Query: 2   KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
           K  N   +  LY  I+  L     F+D K +L +MK +     T     L+++Y +    
Sbjct: 75  KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134

Query: 62  SEALSLLDEMLDS-RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
            E LS++D M+D   ++     +  +++ L     ++       +M  +G+ P+V+ +  
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194

Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
           LI  LC+ + +  A  + ++MP   ++PD   +T ++ GY++      AL ++ +M E G
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254

Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLLKKHYERGNMDEA 239
                 +   +V G  + G +++A     EM  + G  PD+    +L+    + G++  A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 240 IELQNEMMGRG 250
           IE+ + M+  G
Sbjct: 315 IEIMDVMLQEG 325



 Score = 58.2 bits (139), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 4/172 (2%)

Query: 1   MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
           M     + D+  YGT+I GLC   + E +  LL  ++  G+         ++   F+  +
Sbjct: 566 MTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRK 625

Query: 61  PSEALSLLDEMLD-SRIEVTVVTFCVLIDGLCKSG-LVREAIDYFGRMPDFGLHPNVAVY 118
            +EA++L  EML+ +      V++ ++  GLC  G  +REA+D+   + + G  P  +  
Sbjct: 626 TTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSL 685

Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
             L +GL   +  E    L + + ++    +     +++ G LK   F++AL
Sbjct: 686 YMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEV--SMVKGLLKIRKFQDAL 735


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.139    0.412 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,976,619,356
Number of Sequences: 23463169
Number of extensions: 160427686
Number of successful extensions: 499148
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7897
Number of HSP's successfully gapped in prelim test: 4174
Number of HSP's that attempted gapping in prelim test: 352208
Number of HSP's gapped (non-prelim): 76116
length of query: 257
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 118
effective length of database: 9,097,814,876
effective search space: 1073542155368
effective search space used: 1073542155368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)