BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041259
(257 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 311 bits (797), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/258 (58%), Positives = 196/258 (75%), Gaps = 1/258 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
+KG+ IK DL LYGT IWGLC K E +K++++EMKE G+ AN++I TTLMDAYFK+G
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYT 119
P+E L LLDEM + IEVTVVTFCVLIDGLCK+ LV +A+DYF R+ DFGL N A++T
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617
Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
A+IDGLCK N +E A LF++M ++ ++PD TAYT+L+DG K + EAL L+++M E+
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
G+ LDL AYTSLVWGLS C LQ+AR EMIG GI PDE+LCIS+LKKHYE G +DEA
Sbjct: 678 GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 737
Query: 240 IELQNEMMGRGLLSGSKN 257
+ELQ+ +M LL+ +
Sbjct: 738 VELQSYLMKHQLLTSDND 755
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 135/251 (53%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M G + + Y +I +C E E ++ L EMK GL +TV +++D + K G
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ + +EM D E V+T+ LI+ CK G + ++++ M GL PNV Y+
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+D CK+ +++A + +M + ++P+ YT+LID K + +A L N M +VG
Sbjct: 373 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 432
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V+ ++ YT+L+ GL ++EA LF +M G++P+ +L+ + NMD A+
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492
Query: 241 ELQNEMMGRGL 251
EL NE+ GRG+
Sbjct: 493 ELLNELKGRGI 503
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 123/246 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK + D+ Y +I C K EMK NGL N V +TL+DA+ K G
Sbjct: 323 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 382
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A+ +M + T+ LID CK G + +A M G+ NV YTA
Sbjct: 383 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 442
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LIDGLC ++ A LF +M +IP+ +Y ALI G++K ++ AL L N + G
Sbjct: 443 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 502
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ DL Y + +WGL ++ A+V+ +EM GI + ++ +L+ +++ GN E +
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 241 ELQNEM 246
L +EM
Sbjct: 563 HLLDEM 568
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 147/322 (45%), Gaps = 71/322 (22%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MKG +K ++ Y T++ C E + + +M+ GL N T+L+DA K G
Sbjct: 358 MKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A L +EML +E VVT+ LIDGLC + ++EA + FG+M G+ PN+A Y A
Sbjct: 418 LSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNA 477
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPD------------------------------- 149
LI G K ++RA L +E+ R + PD
Sbjct: 478 LIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 150 ----TTAYTALIDGYLKHESFKEALNL------------------------KNRMTEVGV 181
+ YT L+D Y K + E L+L KN++ V
Sbjct: 538 IKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAV 597
Query: 182 D----------LDLNA--YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
D L NA +T+++ GL + ++ A LF +M+ +G++PD SL+
Sbjct: 598 DYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 230 HYERGNMDEAIELQNEMMGRGL 251
++++GN+ EA+ L+++M G+
Sbjct: 658 NFKQGNVLEALALRDKMAEIGM 679
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%)
Query: 27 EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
E++ S+MK + T C L+ + K G+ + +M+ + TV T+ ++
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIM 268
Query: 87 IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
ID +CK G V A F M GL P+ Y ++IDG K ++ F+EM
Sbjct: 269 IDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCC 328
Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
PD Y ALI+ + K L M G+ ++ +Y++LV + G +Q+A
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ +M G++P+E SL+ + + GN+ +A L NEM+ G+
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 4/206 (1%)
Query: 51 LMDAYFKA----GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM 106
+ DA F G EA+ +M R+ + L+ K G + +F M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 107 PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESF 166
G P V Y +ID +CK+ +E AR LF+EM R ++PDT Y ++IDG+ K
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 167 KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL 226
+ + M ++ + D+ Y +L+ + G L + EM G G+ P+ + +L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 227 LKKHYERGNMDEAIELQNEMMGRGLL 252
+ + G M +AI+ +M GL+
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLV 399
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 45/109 (41%)
Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV 206
+P + AL + +EA+ ++M V + L+ ++ G + +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 207 LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
F +MIG G P ++ + G+++ A L EM RGL+ +
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 297
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 146/254 (57%), Gaps = 5/254 (1%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + ++ D+ YG II GLC K +++ ++ +M+++ L + VI TT+M+AYFK+G
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A+++ ++++ E VV +IDG+ K+G + EAI YF N +YT
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE-----KANDVMYTV 408
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID LCK+ LF ++ + ++PD YT+ I G K + +A LK RM + G
Sbjct: 409 LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ LDL AYT+L++GL+ G + EAR +F EM+ GI PD + L++ + + GNM A
Sbjct: 469 LLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAAS 528
Query: 241 ELQNEMMGRGLLSG 254
+L +M RGL++
Sbjct: 529 DLLLDMQRRGLVTA 542
Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 112/210 (53%)
Query: 42 TANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
+ N V +T +D + K+GE AL M + VVTF LIDG CK+G + A+
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 102 YFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYL 161
+ M + NV YTALIDG CKK ++RA ++ M + + P++ YT +IDG+
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 162 KHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
+ A+ +M G+ LD+ AY ++ GL G L+EA + +M ++PD +
Sbjct: 280 QRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ +++ +++ G M A+ + ++++ RG
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGF 369
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 138/305 (45%), Gaps = 65/305 (21%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y T I C + + + MK + L+ N V T L+D Y KAG+ A+SL EM
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID--------- 123
R+ + VVT+ LIDG CK G ++ A + + RM + + PN VYT +ID
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 124 --------------------------GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
GLC ++ A + ++M K D++PD +T ++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARV----------- 206
+ Y K K A+N+ +++ E G + D+ A ++++ G+++ G L EA V
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM 405
Query: 207 -------------------LFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
LF ++ G++PD+ + S + ++GN+ +A +L+ M+
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 248 GRGLL 252
GLL
Sbjct: 466 QEGLL 470
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 120/242 (49%), Gaps = 4/242 (1%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
+ +++ +C + + ++ ++ M G + + +L+D + + G+ A +L+ +
Sbjct: 59 FNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 73 DSR---IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKN 129
S + +V+F L +G K ++ E Y G M PNV Y+ ID CK
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKSG 177
Query: 130 CIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYT 189
++ A F M + + P+ +T LIDGY K + A++L M V + L++ YT
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 190 SLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
+L+ G + G +Q A ++ M+ + P+ ++ +++ ++RG+ D A++ +M+ +
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 250 GL 251
G+
Sbjct: 298 GM 299
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 82 TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
+F ++ +CK G V+ A D MP FG P+V Y +LIDG C+ I A + + +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 142 PKRDMI---PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRC 198
PD ++ +L +G+ K + E M + ++ Y++ + +
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKS 176
Query: 199 GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
G LQ A FH M + P+ + L+ + + G+++ A+ L EM
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 143 bits (361), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 125/242 (51%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ +NIK D Y II GLC + +++ L +EM+ G A+ + TL+ + AG
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ LL +M+ +I VVTF VLID K G +REA M G+ PN Y +
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LIDG CK+N +E A + D M + PD + LI+GY K + L L M+ G
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V + Y +LV G + G L+ A+ LF EM+ R + PD + LL + G +++A+
Sbjct: 434 VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKAL 493
Query: 241 EL 242
E+
Sbjct: 494 EI 495
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 2/250 (0%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
K L T++ GLC+ K D+ +L+ M E G N V +++ K+G+ + A+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL +M + I++ V + ++IDGLCK G + A + F M G ++ Y LI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
+ L +M KR + P+ ++ LID ++K +EA L M + G+ +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNE 245
Y SL+ G + L+EA + MI +G PD I+ ++L Y + N +D+ +EL E
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD-IMTFNILINGYCKANRIDDGLELFRE 428
Query: 246 MMGRGLLSGS 255
M RG+++ +
Sbjct: 429 MSLRGVIANT 438
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 108/211 (51%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K KAD+ Y T+I G C +++D LL +M + ++ N V + L+D++ K G+
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA LL EM+ I +T+ LIDG CK + EAI M G P++ +
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G CK N I+ LF EM R +I +T Y L+ G+ + + A L M
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
V D+ +Y L+ GL G L++A +F ++
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 35/286 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + I ++ + +I E K ++ LL EM + G+ NT+ +L+D + K
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA+ ++D M+ + ++TF +LI+G CK+ + + ++ F M G+ N Y
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV- 179
L+ G C+ +E A+ LF EM R + PD +Y L+DG + ++AL + ++ +
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 180 ----------------------------------GVDLDLNAYTSLVWGLSRCGHLQEAR 205
GV LD AY ++ L R L +A
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+LF +M G PDE+ L++ H + A EL EM G
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 119/251 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K I + +I C K + + ++ + G +TVI TL++
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
SEAL L+D M++ + T++T L++GLC +G V +A+ RM + G PN Y
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+++ +CK A L +M +R++ D Y+ +IDG K S A NL N M G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
D+ Y +L+ G G + L +MI R I P+ + L+ + G + EA
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 241 ELQNEMMGRGL 251
+L EMM RG+
Sbjct: 354 QLLKEMMQRGI 364
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 126/242 (52%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
D ++ T++ GLC+E + ++ L+ M E G + TL++ G+ S+A+ L+
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
D M+++ + VT+ +++ +CKSG A++ +M + + + Y+ +IDGLCK
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
++ A NLF+EM + D Y LI G+ + + L M + + ++ +
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
+ L+ + G L+EA L EM+ RGI P+ I SL+ + ++EAI++ + M+
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 249 RG 250
+G
Sbjct: 397 KG 398
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + A+ Y T++ G C K E +K L EM + + V L+D GE
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+AL + ++ S++E+ + + ++I G+C + V +A D F +P G+ + Y
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I LC+K+ + +A LF +M + PD Y LI +L + A L M G
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Query: 181 VDLDLNAYTSLVWGLS 196
D++ ++ LS
Sbjct: 609 FPADVSTVKMVINMLS 624
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 96/227 (42%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
K +D+ L +M ++ + L A K + L+L +M I ++ T
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
++I+ C+ + A G++ G P+ ++ L++GLC + + A L D M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
P L++G + +A+ L +RM E G + Y ++ + + G A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L +M R I D + ++ + G++D A L NEM +G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Score = 34.3 bits (77), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K +K D Y +I LC + + +L +M E G + + L+ A+ + +
Sbjct: 537 KGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATT 596
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
A L++EM S V T ++I+ L L + +D
Sbjct: 597 AAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLD 634
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 133/252 (52%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + D Y T+I G C E F + ++ +EM +GLT + + T+L+ + KAG
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ A+ LD+M + T+ L+DG + G + EA M D G P+V Y A
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G C +E A + ++M ++ + PD +Y+ ++ G+ + EAL +K M E G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ D Y+SL+ G +EA L+ EM+ G+ PDE +L+ + G++++A+
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 241 ELQNEMMGRGLL 252
+L NEM+ +G+L
Sbjct: 541 QLHNEMVEKGVL 552
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 127/255 (49%), Gaps = 15/255 (5%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y +I G C+ K ED+ +L +MKE GL+ + V +T++ + ++ + EAL + EM+
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ I+ +T+ LI G C+ +EA D + M GL P+ YTALI+ C + +E
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL---------------KNRMT 177
+A L +EM ++ ++PD Y+ LI+G K +EA L + +
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMD 237
E +++ + SL+ G G + EA +F M+G+ PD ++ H G++
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 238 EAIELQNEMMGRGLL 252
+A L EM+ G L
Sbjct: 658 KAYTLYKEMVKSGFL 672
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 113/209 (54%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y ++I +C + L +M+ GL N TTL+D + + G +EA +L EM
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
D+ +VVT+ LI+G C +G + +AI M + GL P+V Y+ ++ G C+ ++
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A + EM ++ + PDT Y++LI G+ + KEA +L M VG+ D YT+L+
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALI 527
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEI 221
G L++A L +EM+ +G+LPD +
Sbjct: 528 NAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K ++ Y T+I G C K +D LL M GL N + +++ + G
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
E +L EM + VT+ LI G CK G +A+ M GL P+V YT+
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI +CK + RA D+M R + P+ YT L+DG+ + EA + M + G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ Y +L+ G G +++A + +M +G+ PD + ++L ++DEA+
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 241 ELQNEMMGRGL 251
++ EM+ +G+
Sbjct: 471 RVKREMVEKGI 481
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 130/253 (51%), Gaps = 15/253 (5%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y T++ G + ++ +L EM +NG + + V L++ + G+ +A+++L++M
Sbjct: 383 YTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ + VV++ ++ G C+S V EA+ M + G+ P+ Y++LI G C++ +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A +L++EM + + PD YTALI+ Y ++AL L N M E GV D+ Y+ L+
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEIL---------------CISLLKKHYERGNMD 237
GL++ +EA+ L ++ +P ++ +SL+K +G M
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 238 EAIELQNEMMGRG 250
EA ++ M+G+
Sbjct: 623 EADQVFESMLGKN 635
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 1/216 (0%)
Query: 37 KENGLTANTVICTTLMDAYFKAGEP-SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
+ +G + ++DA ++ S A ++ EML+S++ V T+ +LI G C +G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 96 VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
+ A+ F +M G PNV Y LIDG CK I+ L M + + P+ +Y
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
+I+G + KE + M G LD Y +L+ G + G+ +A V+ EM+ G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ P I SL+ + GNM+ A+E ++M RGL
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 115/251 (45%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + ++ Y +I G C + + L +M+ G N V TL+D Y K +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ LL M +E ++++ V+I+GLC+ G ++E M G + Y
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI G CK+ +A + EM + + P YT+LI K + A+ ++M G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ + YT+LV G S+ G++ EA + EM G P + +L+ H G M++AI
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 241 ELQNEMMGRGL 251
+ +M +GL
Sbjct: 436 AVLEDMKEKGL 446
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%)
Query: 32 LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
+ EM E+ ++ N L+ + AG AL+L D+M VVT+ LIDG C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 92 KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
K + + M GL PN+ Y +I+GLC++ ++ + EM +R D
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
Y LI GY K +F +AL + M G+ + YTSL+ + + G++ A +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
RG+ P+E +L+ ++G M+EA + EM G
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 15/267 (5%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K IK D Y ++I G C + + +++ L EM GL + T L++AY G+
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA------IDYFGRMP-DFGLH- 112
+AL L +EM++ + VVT+ VLI+GL K REA + Y +P D H
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 113 -----PNVAVYT--ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
N+ + +LI G C K + A +F+ M ++ PD TAY +I G+ +
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
++A L M + G L +LV L + G + E + ++ L +
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715
Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLL 252
L++ ++ GNMD +++ EM G L
Sbjct: 716 LVEINHREGNMDVVLDVLAEMAKDGFL 742
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 141 bits (355), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 129/246 (52%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ +NIKA + Y +I LC + F+D+ L +EM+ G+ A+ V ++L+ G+
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ +L EM+ I VVTF LID K G + EA + + M G+ P+ Y +
Sbjct: 296 WDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNS 355
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LIDG CK+NC+ A +FD M + PD Y+ LI+ Y K + + + L ++ G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ + Y +LV G + G L A+ LF EM+ RG+ P + LL + G +++A+
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 241 ELQNEM 246
E+ +M
Sbjct: 476 EIFEKM 481
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 117/212 (55%)
Query: 40 GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
G +T+ +TL++ + G SEA++L+D M++ + +VT LI+GLC G V EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
+ RM ++G P+ Y +++ LCK A +LF +M +R++ Y+ +ID
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
K SF +AL+L N M G+ D+ Y+SL+ GL G + + EMIGR I+PD
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ +L+ + G + EA EL NEM+ RG+
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 127/249 (51%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
+ DL T+I GLC++ + ++ +L+ M E G + V +++ K+G + AL
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
L +M + I+ +VV + ++ID LCK G +A+ F M G+ +V Y++LI GLC
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
+ + EM R++IPD ++ALID ++K EA L N M G+ D
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y SL+ G + L EA +F M+ +G PD + L+ + + +D+ + L E+
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 247 MGRGLLSGS 255
+GL+ +
Sbjct: 412 SSKGLIPNT 420
Score = 114 bits (284), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 126/244 (51%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
+ D + T++ G C+E + ++ L+ M E + V +TL++ G SEAL
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
L+D M++ + VT+ +++ LCKSG A+D F +M + + +V Y+ +ID LC
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
K + A +LF+EM + + D Y++LI G + + + M + D+
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
+++L+ + G L EA+ L++EMI RGI PD I SL+ + + EA ++ + M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 247 MGRG 250
+ +G
Sbjct: 377 VSKG 380
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 123/281 (43%), Gaps = 35/281 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M G+NI D+ + +I E K ++K L +EM G+ +T+ +L+D + K
Sbjct: 306 MIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENC 365
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA + D M+ E +VT+ +LI+ CK+ V + + F + GL PN Y
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL-----KNR 175
L+ G C+ + A+ LF EM R + P Y L+DG + +AL + K+R
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Query: 176 MT------------------------------EVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
MT + GV D+ Y ++ GL + G L EA
Sbjct: 486 MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEAD 545
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
+LF +M G PD+ L++ H + ++EL EM
Sbjct: 546 MLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y T++ G C K +K L EM G+ + V L+D GE ++AL + ++M
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
SR+ + + + ++I G+C + V +A F + D G+ P+V Y +I GLCKK +
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
A LF +M + PD Y LI +L ++ L M G D
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSAD 594
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%)
Query: 76 IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
IE + T ++I+ C+ + A GR G P+ ++ L++G C + + A
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160
Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
L D M + PD + LI+G EAL L +RM E G D Y ++ L
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ G+ A LF +M R I + ++ + G+ D+A+ L NEM +G+
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K +K D+ Y +I GLC + ++ +L +MKE+G T + L+ A+
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
++ L++EM T ++ID L L + +D
Sbjct: 579 SVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLD 616
Score = 38.1 bits (87), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 35/158 (22%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + + +Y II G+C SK +D+ L + + G+ + V
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV-------------- 526
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
T+ V+I GLCK G + EA F +M + G P+ Y
Sbjct: 527 ---------------------TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
LI + + + L +EM D++ +ID
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 140 bits (353), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 125/242 (51%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ +NIK D Y II GLC +++ L +EM+ G+T N + L+ + AG
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ LL +M+ +I VVTF VLID K G +REA + M G+ P+ YT+
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTS 373
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LIDG CK+N +++A + D M + P+ + LI+GY K + L L +M+ G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V D Y +L+ G G L A+ LF EM+ R + P+ + LL + G ++A+
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 241 EL 242
E+
Sbjct: 494 EI 495
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
K DL T++ GLC+ K ++ LL+ +M E G N V +++ K+G+ + A+
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL +M + I++ V + ++IDGLCK G + A + F M G+ N+ Y LI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
+ L +M KR + P+ ++ LID ++K +EA L M G+ D
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN-MDEAIELQNE 245
YTSL+ G + HL +A + M+ +G P+ I ++L Y + N +D+ +EL +
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN-IRTFNILINGYCKANRIDDGLELFRK 428
Query: 246 MMGRGLLSGS 255
M RG+++ +
Sbjct: 429 MSLRGVVADT 438
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 128/238 (53%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
+ T+I GLC+E + ++ L+ M E G + + TL++ +G+ +EA+ L+D+M+
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ + VT+ +++ +CKSG A++ +M + + + Y+ +IDGLCK ++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A NLF+EM + + + Y LI G+ + + L M + ++ ++ ++ L+
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
+ G L+EA L EMI RGI PD I SL+ + ++D+A ++ + M+ +G
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%)
Query: 40 GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
G NT+ +TL++ G SEAL L+D M++ + ++T L++GLC SG EA
Sbjct: 153 GYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
+ +M ++G PN Y +++ +CK A L +M +R++ D Y+ +IDG
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
KH S A NL N M G+ ++ Y L+ G G + L +MI R I P+
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ L+ + G + EA EL EM+ RG+
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K I ++ Y +I G C +++D LL +M + + N V + L+D++ K G+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L EM+ I +T+ LIDG CK + +A M G PN+ +
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G CK N I+ LF +M R ++ DT Y LI G+ + A L M
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
V ++ Y L+ GL G ++A +F ++
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 98.2 bits (243), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + I D Y ++I G C E+ + + ++ M G N L++ Y KA
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ L L +M + VT+ LI G C+ G + A + F M + PN+ Y
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DGLC E+A +F+++ K M D Y +I G +A +L + G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V + Y ++ GL + G L EA +LF +M G PD L++ H G+ +++
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 241 ELQNEM 246
+L E+
Sbjct: 599 KLIEEL 604
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 108/218 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + I ++ + +I E K +++ L EM G+ +T+ T+L+D + K
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A ++D M+ + + TF +LI+G CK+ + + ++ F +M G+ + Y
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI G C+ + A+ LF EM R + P+ Y L+DG + ++AL + ++ +
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
++LD+ Y ++ G+ + +A LF + +G+ P
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + AD Y T+I G C K +K L EM + N V L+D GE
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+AL + +++ S++E+ + + ++I G+C + V +A D F +P G+ P V Y
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I GLCKK + A LF +M + PD Y LI +L +++ L + G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 181 VDLDLNAYTSLVWGLS 196
+D + ++ LS
Sbjct: 609 FSVDASTIKMVIDMLS 624
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%)
Query: 22 IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV 81
++ K +D+ L +M + + + L A K + L+L +M I +
Sbjct: 65 VDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLY 124
Query: 82 TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
T ++I+ C+ + A G++ G PN ++ LI+GLC + + A L D M
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
+ PD L++G EA+ L ++M E G + Y ++ + + G
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLS 253
A L +M R I D + ++ + G++D A L NEM +G+ +
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K +K + Y +I GLC + +++LL +M+E+G + L+ A+ G+ ++
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
++ L++E+ V T ++ID L L + +D
Sbjct: 597 SVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLD 634
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 138 bits (348), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 127/242 (52%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + IK D Y II GLC + +++ L +EM+ G A+ +I TTL+ + AG
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ LL +M+ +I VV F LID K G +REA + M G+ P+ YT+
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LIDG CK+N +++A ++ D M + P+ + LI+GY K + L L +M+ G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V D Y +L+ G G L+ A+ LF EM+ R + PD + LL + G ++A+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 241 EL 242
E+
Sbjct: 478 EI 479
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 2/250 (0%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
K L ++ GLC+ K D+ LL+ M E G N V ++ K+G+ + A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL +M + +I++ V + ++IDGLCK G + A + F M G ++ +YT LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
+ L +M KR + PD A++ALID ++K +EA L M + G+ D
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM-DEAIELQNE 245
YTSL+ G + L +A + M+ +G P+ I ++L Y + N+ D+ +EL +
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN-IRTFNILINGYCKANLIDDGLELFRK 412
Query: 246 MMGRGLLSGS 255
M RG+++ +
Sbjct: 413 MSLRGVVADT 422
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 106/212 (50%)
Query: 40 GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
G +TV +TL++ G SEAL L+D M++ + T++T L++GLC +G V +A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
+ RM + G PN Y ++ +CK A L +M +R + D Y+ +IDG
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
K S A NL N M G D+ YT+L+ G G + L +MI R I PD
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 220 EILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ +L+ + G + EA EL EM+ RG+
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 128/252 (50%), Gaps = 4/252 (1%)
Query: 3 GKNIK----ADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA 58
GK IK D + T+I GLC+E + ++ L+ M E G + L++
Sbjct: 131 GKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLN 190
Query: 59 GEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY 118
G+ S+A+ L+D M+++ + VT+ ++ +CKSG A++ +M + + + Y
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 119 TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
+ +IDGLCK ++ A NLF+EM + D YT LI G+ + + L M +
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
+ D+ A+++L+ + G L+EA L EMI RGI PD + SL+ + +D+
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370
Query: 239 AIELQNEMMGRG 250
A + + M+ +G
Sbjct: 371 ANHMLDLMVSKG 382
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 105/211 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K KAD+ +Y T+I G C +++D LL +M + +T + V + L+D + K G+
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L EM+ I VT+ LIDG CK + +A M G PN+ +
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G CK N I+ LF +M R ++ DT Y LI G+ + + A L M
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
V D+ +Y L+ GL G ++A +F ++
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 114/219 (52%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + I D+ + +I E K +++ L EM + G++ +TV T+L+D + K +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A +LD M+ + TF +LI+G CK+ L+ + ++ F +M G+ + Y
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI G C+ +E A+ LF EM R + PD +Y L+DG + ++AL + ++ +
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
++LD+ Y ++ G+ + +A LF + +G+ PD
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 111/246 (45%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + I D Y ++I G C E++ + + +L M G N L++ Y KA
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ L L +M + VT+ LI G C+ G + A + F M + P++ Y
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DGLC E+A +F+++ K M D Y +I G +A +L + G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V D+ Y ++ GL + G L EA +LF +M G P+ L++ H G+ ++
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 241 ELQNEM 246
+L E+
Sbjct: 583 KLIEEI 588
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 1/204 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + AD Y T+I G C K E +K L EM + + V L+D GE
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
P +AL + +++ S++E+ + + ++I G+C + V +A D F +P G+ P+V Y
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNI 532
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I GLCKK + A LF +M + P+ Y LI +L ++ L + G
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
+D + +V LS G L+++
Sbjct: 593 FSVDASTVKMVVDMLSD-GRLKKS 615
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 96/230 (41%)
Query: 22 IESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVV 81
++ K +D+ L EM + + + L + + L L +M I +
Sbjct: 49 VDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLY 108
Query: 82 TFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEM 141
T ++I+ C+ + A G++ G P+ ++ LI+GLC + + A L D M
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRM 168
Query: 142 PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHL 201
+ P AL++G + +A+ L +RM E G + Y ++ + + G
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 202 QEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
A L +M R I D + ++ + G++D A L NEM +G
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K +K D+ Y +I GLC + ++ LL +M+E+G + N L+ A+ G+ ++
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID 101
+ L++E+ V T +++D L L + +D
Sbjct: 581 SAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLD 618
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 137 bits (346), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 147/288 (51%), Gaps = 36/288 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
M NI+ + +Y TII GLC + ++ LL+ M +E L + + +++D +FK G
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEG 598
Query: 60 EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
E A++ +EM + I V+T+ L++GLCK+ + +A++ M + G+ ++ Y
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
ALIDG CK++ +E A LF E+ + + P Y +LI G+ + AL+L +M +
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI--------------- 224
G+ DL YT+L+ GL + G+L A L+ EM G++PDEI+
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 225 --------------------SLLKKHYERGNMDEAIELQNEMMGRGLL 252
+++ HY GN+DEA L +EM+ +G+L
Sbjct: 779 VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGIL 826
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 132/252 (52%), Gaps = 1/252 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + I ++ Y ++ G C + + ++++ S + E GL N + L+D F+ +
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM-PDFGLHPNVAVYT 119
AL +++ M S IEV V + +I+GLCK G +A + M + L + Y
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
++IDG K+ ++ A ++EM + P+ YT+L++G K+ +AL +++ M
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
GV LD+ AY +L+ G + +++ A LF E++ G+ P + + SL+ GNM A
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 240 IELQNEMMGRGL 251
++L +M+ GL
Sbjct: 709 LDLYKKMLKDGL 720
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 2/205 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK K +K D+P YG +I G C S E + L SE+ E GL + I +L+ + G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
AL L +ML + + T+ LIDGL K G + A + + M GL P+ +YT
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+++GL KK + +F+EM K ++ P+ Y A+I G+ + + EA L + M + G
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEAR 205
+ D + LV G + G+LQ R
Sbjct: 825 ILPDGATFDILVSG--QVGNLQPVR 847
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 12/218 (5%)
Query: 40 GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
GLT + T++ + K + EAL L DE ++ + V ++ LCK G EA
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEA 462
Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDG 159
+ +M G+ PNV Y ++ G C++ ++ AR +F + ++ + P+ Y+ LIDG
Sbjct: 463 TELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522
Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
++ + AL + N MT ++++ Y +++ GL + G +AR L MI +
Sbjct: 523 CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI-----EE 577
Query: 220 EILCI------SLLKKHYERGNMDEAIELQNEMMGRGL 251
+ LC+ S++ ++ G MD A+ EM G G+
Sbjct: 578 KRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 108/219 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M G I ++ Y +++ GLC ++ + + + EMK G+ + L+D + K
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A +L E+L+ + + + LI G G + A+D + +M GL ++ YT
Sbjct: 670 MESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LIDGL K + A L+ EM ++PD YT +++G K F + + + M +
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
V ++ Y +++ G R G+L EA L EM+ +GILPD
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPD 828
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 2/249 (0%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGL-TANTVICTTLMDAYFKAGEPS 62
+ + D LY + C + LL EMKE L + T+++ A K G
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 63 EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
+A+ L DEML I + VV LI G CK+ + A+ F +M G PN ++ LI
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
+ K +E+A + +M + P +I G+LK + +EAL L + E G+
Sbjct: 382 EWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLA 441
Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
T L W L + G EA L +M RGI P+ + +++ H + NMD A +
Sbjct: 442 NVFVCNTILSW-LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 243 QNEMMGRGL 251
+ ++ +GL
Sbjct: 501 FSNILEKGL 509
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 37/278 (13%)
Query: 10 LPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLD 69
P + L + ++K L S M G+ + V LM A + +P+EAL +L
Sbjct: 198 FPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLS 257
Query: 70 EMLDSRIEVTVVTFCVLIDGLCKS-------GLVRE------------------------ 98
++ E + + + + CK+ L+RE
Sbjct: 258 RAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317
Query: 99 -----AIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
AI M G+ NV T+LI G CK N + A LFD+M K P++ +
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF 377
Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
+ LI+ + K+ ++AL +M +G+ + +++ G + +EA LF E
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437
Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
G L + +C ++L ++G DEA EL ++M RG+
Sbjct: 438 TG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGI 474
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 36/256 (14%)
Query: 32 LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD------------------ 73
L+ K G N+ L++AY K + A+ ++++ML+
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209
Query: 74 SRIEVT--------VVTFCVLIDGLCKSGLVR---------EAIDYFGRMPDFGLHPNVA 116
R +T +V V D + L+R EA++ R + G P+
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSL 269
Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDM-IPDTTAYTALIDGYLKHESFKEALNLKNR 175
+Y+ + CK + A +L EM ++ + +P YT++I +K + +A+ LK+
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDE 329
Query: 176 MTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
M G+ +++ A TSL+ G + L A VLF +M G P+ + L++ + G
Sbjct: 330 MLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGE 389
Query: 236 MDEAIELQNEMMGRGL 251
M++A+E +M GL
Sbjct: 390 MEKALEFYKKMEVLGL 405
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 22/263 (8%)
Query: 2 KGKNIKADLPLYGTIIWGLCIESKFEDS-------KLLLSEMKENGLTANTVICTTLMDA 54
+ N +A L Y W FED +L+S + G ++ +I
Sbjct: 82 RRNNPEAALRFYN---WARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLI------R 132
Query: 55 YFKAGEPSEALSLL-DEMLDSR----IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
Y P+ S+L +++DS EV F L++ K A+D +M +
Sbjct: 133 YVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLEL 192
Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
+ P + L ++N + A+ L+ M + D L+ L+ E EA
Sbjct: 193 DVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEA 252
Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI-LPDEILCISLLK 228
L + +R E G + D Y+ V + L A L EM + + +P + S++
Sbjct: 253 LEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVIL 312
Query: 229 KHYERGNMDEAIELQNEMMGRGL 251
++GNMD+AI L++EM+ G+
Sbjct: 313 ASVKQGNMDDAIRLKDEMLSDGI 335
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 137 bits (345), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 129/253 (50%), Gaps = 1/253 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K I+ + +I GLC E K + + M G N I T L+D Y K+G
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A+ LL M+D + VVT+ V+++GLCK+G V EA+DYF GL N Y++
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM-TEV 179
LIDGL K ++ A LF+EM ++ D+ Y ALID + KH EA+ L RM E
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
G D + YT L+ G+ + +EA L+ MI +GI P +L G + A
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 240 IELQNEMMGRGLL 252
++ +E+ G++
Sbjct: 558 CKILDELAPMGVI 570
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 119/246 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ IK D+ Y T+I G C + + + L +M+ G A+ + T++ A + +
Sbjct: 248 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD 307
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
++L EM + I+V F ++I GLCK G + E F M G PNVA+YT
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LIDG K +E A L M PD Y+ +++G K+ +EAL+ + G
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ ++ Y+SL+ GL + G + EA LF EM +G D +L+ + +DEAI
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 241 ELQNEM 246
L M
Sbjct: 488 ALFKRM 493
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 2/251 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
MK I+ L Y ++ GL + + F DS + E+ E+G + + V T++ Y KAG
Sbjct: 213 MKENGIEPTLYTYNFLMNGL-VSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271
Query: 60 EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
+ +A+ L +M E +T+ +I + + M + G+ ++
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS 331
Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
+I GLCK+ + +F+ M ++ P+ YT LIDGY K S ++A+ L +RM +
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
G D+ Y+ +V GL + G ++EA FH G+ + + SL+ + G +DEA
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEA 451
Query: 240 IELQNEMMGRG 250
L EM +G
Sbjct: 452 ERLFEEMSEKG 462
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 112/250 (44%)
Query: 2 KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
K K +L Y +++ L + + + + SE+K+ L+ ++ K G
Sbjct: 144 KQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMV 203
Query: 62 SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
E L + +M ++ IE T+ T+ L++GL + V A F M + P++ Y +
Sbjct: 204 EELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263
Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
I G CK ++A +M R D Y +I F + L M E G+
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGI 323
Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
+ +A++ ++ GL + G L E +F MI +G P+ + L+ + + G++++AI
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 242 LQNEMMGRGL 251
L + M+ G
Sbjct: 384 LLHRMIDEGF 393
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 2/205 (0%)
Query: 12 LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
Y ++I GL + ++++ L EM E G T ++ L+DA+ K + EA++L M
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Query: 72 LDSR-IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
+ + TV T+ +L+ G+ K EA+ + M D G+ P A + AL GLC
Sbjct: 494 EEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGK 553
Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
+ RA + DE+ +I D A +I+ K KEA L + +TE G ++ T
Sbjct: 554 VARACKILDELAPMGVILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTV 612
Query: 191 LVWGLSRCGHLQEARVLFHEMIGRG 215
++ L + G A L H IG G
Sbjct: 613 MINALRKVGKADLAMKLMHSKIGIG 637
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%)
Query: 35 EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
+MKENG+ LM+ A A + + M RI+ +VT+ +I G CK+G
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271
Query: 95 LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
++A++ M G + Y +I + L+ EM ++ + A++
Sbjct: 272 QTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFS 331
Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
+I G K E + M G ++ YT L+ G ++ G +++A L H MI
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 215 GILPDEILCISLLKKHYERGNMDEAIE 241
G PD + ++ + G ++EA++
Sbjct: 392 GFKPDVVTYSVVVNGLCKNGRVEEALD 418
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 137 bits (344), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 130/251 (51%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK + +L Y +I G C + L E+ L N V+ TL+D + KA E
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A SL M+ ++ + + LI G CKSG + EA+ M L P+V YT
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+GLC ++ + A LF +M + P + Y +LI GY K + ++AL+L + MT G
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V+ ++ +++L+ G ++ A L+ EM +GI+PD + +L+ H++ NM EA+
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 241 ELQNEMMGRGL 251
L ++M+ G+
Sbjct: 500 RLYSDMLEAGI 510
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 125/252 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ N+ D+ Y +I GLCIE + ++ L +MK + ++ +L+ Y K
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+AL L EM S +E ++TF LIDG C ++ A+ + M G+ P+V YTA
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID K+ ++ A L+ +M + + P+ + L+DG+ K A++ +
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ +T L+ GL + G++ A F +M GI PD +S+LK H + + + +
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM 604
Query: 241 ELQNEMMGRGLL 252
LQ +M+ G+L
Sbjct: 605 MLQCDMIKTGIL 616
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 122/237 (51%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
++ ++GT++ G C + ++ L M + G+ N + L+ + K+G EA+ LL
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
EM + V T+ +LI+GLC V EA F +M + + P+ A Y +LI G CK+
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
+E+A +L EM + P+ ++ LIDGY K A+ L MT G+ D+ Y
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
T+L+ + +++EA L+ +M+ GI P++ L+ ++ G + AI+ E
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 119/251 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + D+ +Y + + + + LL EM G+ N I T + + +
Sbjct: 190 MISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNK 249
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA + + M + + T+ +IDG CK+G VR+A + + L PNV V+
Sbjct: 250 MEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGT 309
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DG CK + AR+LF M K + P+ Y LI G+ K + EA+ L + M +
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ D+ YT L+ GL + EA LF +M I P SL+ + + NM++A+
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 241 ELQNEMMGRGL 251
+L +EM G+
Sbjct: 430 DLCSEMTASGV 440
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 119/250 (47%), Gaps = 12/250 (4%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK + I Y ++I G C E E + L SEM +G+ N + +TL+D Y +
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A+ L EM I VVT+ LID K ++EA+ + M + G+HPN +
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DG K+ + A + + E ++ + +T LI+G ++ A + M G
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARV-----LFHEMIGRGILPDEILCISLLKKHYE-RG 234
+ D+ +Y S++ GHLQE R+ L +MI GILP+ +L LL + Y+ G
Sbjct: 580 ITPDICSYVSMLK-----GHLQEKRITDTMMLQCDMIKTGILPN-LLVNQLLARFYQANG 633
Query: 235 NMDEAIELQN 244
+ A L N
Sbjct: 634 YVKSACFLTN 643
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 9/207 (4%)
Query: 50 TLMDAYFKAGEPSEA----LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
+L++ + EPS + L+++ + + V F +LI + GL EA+ + R
Sbjct: 100 SLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGV--FSLLIMEFLEMGLFEEAL-WVSR 156
Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
+ P+ ++++GL ++ + + M R ++PD Y L K
Sbjct: 157 --EMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGL 214
Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
+ + L + MT +G+ ++ YT + L R ++EA +F M G+LP+ +
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274
Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLL 252
++ + + GN+ +A L E++ LL
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELL 301
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 125/245 (51%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
I D+ Y ++I+G E + +L +M+ G N T L+D + K G+ EA
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
++L+EM ++ V F LI CK + EA++ F MP G P+V + +LI GL
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
C+ + I+ A L +M ++ +T Y LI+ +L+ KEA L N M G LD
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
Y SL+ GL R G + +AR LF +M+ G P I C L+ G ++EA+E Q E
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 246 MMGRG 250
M+ RG
Sbjct: 625 MVLRG 629
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 123/252 (48%), Gaps = 5/252 (1%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + I L +G ++ C ++ + + LL +M ++G N+VI TL+ + K
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+EAL LL+EM TF +I GLCK + EA RM G P+ Y
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALN-LKNRMTEV 179
L++GLCK ++ A++LF +PK P+ + LI G++ H +A L + +T
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
G+ D+ Y SL++G + G + A + H+M +G P+ L+ + G +DEA
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEA 443
Query: 240 IELQNEMMGRGL 251
+ NEM GL
Sbjct: 444 YNVLNEMSADGL 455
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K K D+ + ++I GLC + + + LL +M G+ ANTV TL++A+ + GE
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L++EM+ + +T+ LI GLC++G V +A F +M G P+
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+GLC+ +E A EM R PD + +LI+G + ++ L + ++ G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
+ D + +L+ L + G + +A +L E I G +P+
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 116/251 (46%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K K ++ Y ++ G C K +++ +L+EM +GL NTV L+ A+ K
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA+ + EM + V TF LI GLC+ ++ A+ M G+ N Y
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+ ++ I+ AR L +EM + D Y +LI G + +A +L +M G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ L+ GL R G ++EA EM+ RG PD + SL+ G +++ +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 241 ELQNEMMGRGL 251
+ ++ G+
Sbjct: 655 TMFRKLQAEGI 665
Score = 94.4 bits (233), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 116/256 (45%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M +K + + +I C E + ++ + EM G + +L+ + E
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
AL LL +M+ + VT+ LI+ + G ++EA M G + Y +
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI GLC+ +++AR+LF++M + P + LI+G + +EA+ + M G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
D+ + SL+ GL R G +++ +F ++ GI PD + +L+ + G + +A
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Query: 241 ELQNEMMGRGLLSGSK 256
L +E + G + +
Sbjct: 690 LLLDEGIEDGFVPNHR 705
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Query: 12 LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
+Y +I L +F+ LL +MK+ G+ + ++M Y KAG P + L+ EM
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 72 LD-SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
+ E T ++ V+++ L + A + F M + P + + ++ C N
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
I+ A +L +M K +P++ Y LI K EAL L M +G D +
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
++ GL + + EA + + M+ RG PD+I L+ + G +D A +L
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%)
Query: 16 IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
+I GLC E++ EM G T + V +L++ +AG + L++ ++
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 76 IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
I VTF L+ LCK G V +A + G PN ++ L+ + + ++R R
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 131/251 (52%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK K +K + +YG+II LC K +++ SEM G+ +TV+ TTL+D + K G+
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A EM I V+T+ +I G C+ G + EA F M GL P+ +T
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G CK ++ A + + M + P+ YT LIDG K A L + M ++G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ ++ Y S+V GL + G+++EA L E G+ D + +L+ + + G MD+A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 241 ELQNEMMGRGL 251
E+ EM+G+GL
Sbjct: 547 EILKEMLGKGL 557
Score = 130 bits (328), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 125/251 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K D+ Y T++ G C + + L+ MK GL N+ I +++ + +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+EA EM+ I V + LIDG CK G +R A +F M + P+V YTA
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I G C+ + A LF EM + + PD+ +T LI+GY K K+A + N M + G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
++ YT+L+ GL + G L A L HEM G+ P+ S++ + GN++EA+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 241 ELQNEMMGRGL 251
+L E GL
Sbjct: 512 KLVGEFEAAGL 522
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 121/251 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M ++I D+ Y II G C ++ L EM GL ++V T L++ Y KAG
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A + + M+ + VVT+ LIDGLCK G + A + M GL PN+ Y +
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+++GLCK IE A L E + DT YT L+D Y K +A + M G
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ + + L+ G G L++ L + M+ +GI P+ SL+K++ R N+ A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 241 ELQNEMMGRGL 251
+ +M RG+
Sbjct: 617 AIYKDMCSRGV 627
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 115/215 (53%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
++ ++ Y +I+ GLC E++ L+ E + GL A+TV TTLMDAY K+GE +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
+L EML ++ T+VTF VL++G C G++ + M G+ PN + +L+
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
C +N ++ A ++ +M R + PD Y L+ G+ K + KEA L M G + +
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
+ Y+ L+ G + EAR +F +M G+ D+
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 122/248 (49%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K ++ D + +I G C +D+ + + M + G + N V TTL+D K G+
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
A LL EM ++ + T+ +++GLCKSG + EA+ G GL+ + YT L+D
Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
CK +++A+ + EM + + P + L++G+ H ++ L N M G+
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
+ + SLV +L+ A ++ +M RG+ PD +L+K H + NM EA L
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 244 NEMMGRGL 251
EM G+G
Sbjct: 655 QEMKGKGF 662
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y +I +C + +++ LL M+ G T + + +T+++ Y + GE + L++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
++ + +I LC+ + EA + F M G+ P+ VYT LIDG CK+ I
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A F EM RD+ PD YTA+I G+ + EA L + M G++ D +T L+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
G + GH+++A + + MI G P+ + +L+ + G++D A EL +EM GL
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y T+I GLC E + + LL EM + GL N ++++ K+G EA+ L+ E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ + VT+ L+D CKSG + +A + M GL P + + L++G C +E
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
L + M + + P+ T + +L+ Y + K A + M GV D Y +LV
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
G + +++EA LF EM G+G L+K +R EA E+ ++M GL
Sbjct: 639 KGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 108/226 (47%), Gaps = 1/226 (0%)
Query: 27 EDSKLLLSEMKENGLTANTVICTTLMDAYFK-AGEPSEALSLLDEMLDSRIEVTVVTFCV 85
+++ + +M GL + C + K + + A+ + E + + V ++ +
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 86 LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
+I +C+ G ++EA M G P+V Y+ +++G C+ +++ L + M ++
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
+ P++ Y ++I + EA + M G+ D YT+L+ G + G ++ A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
F+EM R I PD + +++ + G+M EA +L +EM +GL
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 417
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 40/207 (19%)
Query: 81 VTFCVLIDGLCKSGLVREAIDYFGRM---------------------------------- 106
V F VL+D GL+REA F +M
Sbjct: 180 VFFQVLVD----FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR 235
Query: 107 --PDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
P+ G+ NVA Y +I +C+ I+ A +L M + PD +Y+ +++GY +
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295
Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
+ L M G+ + Y S++ L R L EA F EMI +GILPD ++
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 225 SLLKKHYERGNMDEAIELQNEMMGRGL 251
+L+ +RG++ A + EM R +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDI 382
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 70/162 (43%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M GK ++ + + ++ G C+ ED + LL+ M G+ N +L+ Y
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A ++ +M + T+ L+ G CK+ ++EA F M G +V+ Y+
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
LI G K+ AR +FD+M + + D + D K
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MKGK + Y +I G KF +++ + +M+ GL A+ I D +K
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Query: 61 PSEALSLLDEMLDS 74
P + +DE++++
Sbjct: 717 PDTIVDPIDEIIEN 730
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 36/288 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEM-KENGLTANTVICTTLMDAYFKAG 59
M N +A+ +Y TII GLC + +K +L + KE + + +++D + K G
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 60 EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
+ A+ EM ++ VVTF LI+G CKS + A++ M L ++ Y
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
ALIDG CKKN ++ A LF E+P+ ++P+ + Y +LI G+ A++L +M
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND 724
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISL------------- 226
G+ DL YT+++ GL + G++ A L+ E++ GI+PDEIL + L
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKA 784
Query: 227 ------LKK----------------HYERGNMDEAIELQNEMMGRGLL 252
+KK H+ GN++EA L +EM+ +G++
Sbjct: 785 SKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 110 bits (276), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK +K DLP YG +I G C ++ + + L SE+ E GL N + +L+ + G+
Sbjct: 651 MKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGK 710
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A+ L +M++ I + T+ +IDGL K G + A D + + D G+ P+ ++
Sbjct: 711 MDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMV 770
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L++GL KK +A + +EM K+D+ P+ Y+ +I G+ + + EA L + M E G
Sbjct: 771 LVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKG 830
Query: 181 VDLDLNAYTSLVWG 194
+ D + LV G
Sbjct: 831 IVHDDTVFNLLVSG 844
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 35/256 (13%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y +II G + + EM ENG + N V T+L++ + K+ AL + EM
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVY-------------- 118
+++ + + LIDG CK ++ A F +P+ GL PNV+VY
Sbjct: 653 SMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 119 ---------------------TALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
T +IDGL K I A +L+ E+ ++PD + L+
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLV 772
Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
+G K F +A + M + V ++ Y++++ G R G+L EA L EM+ +GI+
Sbjct: 773 NGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Query: 218 PDEILCISLLKKHYER 233
D+ + L+ E+
Sbjct: 833 HDDTVFNLLVSGRVEK 848
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 2/221 (0%)
Query: 32 LLSEMKEN-GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGL 90
LL EM+ G+ A+ T+++ A+ K G EA+ ++DEM+ I ++V+ L++G
Sbjct: 296 LLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGY 355
Query: 91 CKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDT 150
CK + +A+D F RM + GL P+ +++ +++ CK +E+A + M + P +
Sbjct: 356 CKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSS 415
Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
+I G LK ES + AL + N E + + + G + A
Sbjct: 416 VLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMC-NKIFLLFCKQGKVDAATSFLKM 474
Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
M +GI P+ + +++ H NMD A + +EM+ +GL
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 116/253 (45%), Gaps = 6/253 (2%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + + D ++ ++ C + E + MK + ++V+ T++ KA
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAES 430
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
P AL + ++ +S I + + + CK G V A + M G+ PNV Y
Sbjct: 431 PEAALEIFNDSFESWIAHGFMCNKIFL-LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNN 489
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
++ C+ ++ AR++F EM ++ + P+ Y+ LIDG+ K++ + A ++ N+M
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASN 549
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI---SLLKKHYERGNMD 237
+ + Y +++ GL + G +A+ + +I + C S++ + G+ D
Sbjct: 550 FEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRY--SMSCTSYNSIIDGFVKVGDTD 607
Query: 238 EAIELQNEMMGRG 250
A+E EM G
Sbjct: 608 SAVETYREMSENG 620
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 113/246 (45%), Gaps = 1/246 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + +P ++ L + +++K + ++M G+ + V LM A + +
Sbjct: 195 MVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERK 254
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP-DFGLHPNVAVYT 119
P EA+ + ++ E + F + + CK+ + A+D M G+ + YT
Sbjct: 255 PEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYT 314
Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
++I K+ +E A + DEM + A T+L++GY K +AL+L NRM E
Sbjct: 315 SVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEE 374
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
G+ D ++ +V + +++A + M I P +L ++++ + + + A
Sbjct: 375 GLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAA 434
Query: 240 IELQNE 245
+E+ N+
Sbjct: 435 LEIFND 440
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 23/245 (9%)
Query: 14 GTIIWGL------CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSL 67
G + W L I + S LL+ + N V+ L+D+ + G
Sbjct: 113 GDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFG-------- 164
Query: 68 LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
E+T F L++ ++ + A+D FG M D + P V ++ L +
Sbjct: 165 --------FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVR 216
Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
N I+ A+ ++++M + D L+ L+ +EA+ + R+ G + D
Sbjct: 217 SNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLL 276
Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGR-GILPDEILCISLLKKHYERGNMDEAIELQNEM 246
++ V + L A L EM G+ G+ + S++ + GNM+EA+ + +EM
Sbjct: 277 FSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 247 MGRGL 251
+G G+
Sbjct: 337 VGFGI 341
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 3/203 (1%)
Query: 51 LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
L++AY + A+ M+D ++ V ++ L +S L+ EA + + +M G
Sbjct: 175 LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIG 234
Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
+ + L+ ++ E A +F + R PD ++ + K AL
Sbjct: 235 VAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMAL 294
Query: 171 NLKNRMT-EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
+L M ++GV YTS++ + G+++EA + EM+G GI P ++ + L
Sbjct: 295 DLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGI-PMSVIAATSLVN 353
Query: 230 HYERGN-MDEAIELQNEMMGRGL 251
Y +GN + +A++L N M GL
Sbjct: 354 GYCKGNELGKALDLFNRMEEEGL 376
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M I DL Y T+I GL + + L SE+ + G+ + ++ L++ K G+
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A +L+EM + V+ + +I G + G + EA M + G+ + V+
Sbjct: 781 FLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNL 840
Query: 121 LIDGLCKK 128
L+ G +K
Sbjct: 841 LVSGRVEK 848
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 4/256 (1%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ +N+KAD+ Y TII LC + + + L EM+ G+ ++ V +L+ KAG+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
++ LL +M+ I V+TF VL+D K G ++EA + + M G+ PN+ Y
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DG C +N + A N+ D M + PD +T+LI GY + + + + +++ G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ + Y+ LV G + G ++ A LF EM+ G+LPD + LL + G +++A+
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 241 E----LQNEMMGRGLL 252
E LQ M G++
Sbjct: 459 EIFEDLQKSKMDLGIV 474
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 123/247 (49%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
D + T+I GL +E K ++ +L+ M ENG + V ++++ ++G+ S AL LL
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
+M + ++ V T+ +ID LC+ G + AI F M G+ +V Y +L+ GLCK
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
L +M R+++P+ + L+D ++K +EA L M G+ ++ Y
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
+L+ G L EA + M+ PD + SL+K + +D+ +++ +
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396
Query: 249 RGLLSGS 255
RGL++ +
Sbjct: 397 RGLVANA 403
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 124/251 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + I ++ Y T++ G C++++ ++ +L M N + + V T+L+ Y
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ + + + + VT+ +L+ G C+SG ++ A + F M G+ P+V Y
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DGLC +E+A +F+++ K M YT +I+G K ++A NL + G
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V ++ YT ++ GL + G L EA +L +M G P++ +L++ H G++ +
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563
Query: 241 ELQNEMMGRGL 251
+L EM G
Sbjct: 564 KLIEEMKSCGF 574
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 35/281 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLS-------------------------- 34
M+ K IK+ + Y +++ GLC K+ D LLL
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 35 ---------EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
EM G++ N + TLMD Y SEA ++LD M+ ++ +VTF
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 86 LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
LI G C V + + F + GL N Y+ L+ G C+ I+ A LF EM
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
++PD Y L+DG + ++AL + + + +DL + YT+++ G+ + G +++A
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
LF + +G+ P+ + ++ ++G++ EA L +M
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 107/217 (49%)
Query: 35 EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
+++ NG+ N +++ + + + A S+L +++ E TF LI GL G
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 95 LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
V EA+ RM + G P+V Y ++++G+C+ A +L +M +R++ D Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
+ID + A++L M G+ + Y SLV GL + G + +L +M+ R
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
I+P+ I LL + G + EA EL EM+ RG+
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
D+ + ++I G C+ + +D + + + GL AN V + L+ + ++G+ A L
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
EM+ + V+T+ +L+DGLC +G + +A++ F + + + +YT +I+G+CK
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
+E A NLF +P + + P+ YT +I G K S EA L +M E G + Y
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
+L+ R G L + L EM G D
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 113/219 (51%), Gaps = 2/219 (0%)
Query: 21 CIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV 80
C ++ F S +L ++ + G +T TL+ F G+ SEA+ L+D M+++ + V
Sbjct: 136 CCKTCFAYS--VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193
Query: 81 VTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDE 140
VT+ +++G+C+SG A+D +M + + +V Y+ +ID LC+ CI+ A +LF E
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 141 MPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGH 200
M + + Y +L+ G K + + L M + ++ + L+ + G
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 201 LQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
LQEA L+ EMI RGI P+ I +L+ + + + EA
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 91/184 (49%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
+ + A+ Y ++ G C K + ++ L EM +G+ + + L+D G+ +
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
AL + +++ S++++ +V + +I+G+CK G V +A + F +P G+ PNV YT +I
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
GLCKK + A L +M + P+ Y LI +L+ + L M G
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576
Query: 184 DLNA 187
D ++
Sbjct: 577 DASS 580
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 4/194 (2%)
Query: 63 EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
+A++L EM+ SR ++V F + ++ +D+ ++ G+ N+ +I
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 123 DGLCK--KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+ C+ K C A ++ ++ K PDTT + LI G EA+ L +RM E G
Sbjct: 131 NCFCRCCKTCF--AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG 188
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
D+ Y S+V G+ R G A L +M R + D +++ G +D AI
Sbjct: 189 CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAI 248
Query: 241 ELQNEMMGRGLLSG 254
L EM +G+ S
Sbjct: 249 SLFKEMETKGIKSS 262
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + D+ YG ++ GLC K E + + +++++ + V+ TT+++ K G+
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A +L + ++ V+T+ V+I GLCK G + EA +M + G PN Y
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
LI + + + L +EM D ++ +ID L E K L++
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSFLDM 600
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 127/232 (54%)
Query: 20 LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
C S+ + L +M + G + V T+L++ + EA+S++++M++ I+
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 80 VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
VV + +ID LCK+G V A+ F +M ++G+ P+V +YT+L++GLC A +L
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
M KR + PD + ALID ++K F +A L N M + + ++ YTSL+ G G
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ EAR +F+ M +G PD + SL+ + +D+A+++ EM +GL
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 115/214 (53%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
IK D+ +Y TII LC + L +M+ G+ + V+ T+L++ +G +A
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
SLL M +I+ V+TF LID K G +A + + M + PN+ YT+LI+G
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
C + C++ AR +F M + PD AYT+LI+G+ K + +A+ + M++ G+ +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
YT+L+ G + G A+ +F M+ RG+ P+
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 133/246 (54%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
+ D+ + ++I G C+ ++ E++ ++++M E G+ + V+ TT++D+ K G + AL
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
SL D+M + I VV + L++GLC SG R+A M + P+V + ALID
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
K+ A L++EM + + P+ YT+LI+G+ EA + M G D+
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
AYTSL+ G +C + +A +F+EM +G+ + I +L++ + G + A E+ +
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 246 MMGRGL 251
M+ RG+
Sbjct: 378 MVSRGV 383
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 126/252 (50%), Gaps = 3/252 (1%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I+ D+ +Y +++ GLC ++ D+ LL M + + + + L+DA+ K G+
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK 262
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A L +EM+ I + T+ LI+G C G V EA F M G P+V YT+
Sbjct: 263 FLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTS 322
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G CK ++ A +F EM ++ + +T YT LI G+ + A + + M G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR---GILPDEILCISLLKKHYERGNMD 237
V ++ Y L+ L G +++A ++F +M R G+ P+ LL G ++
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 238 EAIELQNEMMGR 249
+A+ + +M R
Sbjct: 443 KALMVFEDMRKR 454
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 115/219 (52%), Gaps = 3/219 (1%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K D+ Y ++I G C K +D+ + EM + GLT NT+ TTL+ + + G+
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF---GLHPNVAV 117
P+ A + M+ + + T+ VL+ LC +G V++A+ F M G+ PN+
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 118 YTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMT 177
Y L+ GLC +E+A +F++M KR+M YT +I G K K A+NL +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 178 EVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
GV ++ YT+++ GL R G EA VLF +M G+
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 111/223 (49%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
+F ++ L + M E+ + + T L++ K + ++L D + + + T
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
+L++ C+S A + G+M G P++ +T+LI+G C N +E A ++ ++M +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
+ PD YT +ID K+ AL+L ++M G+ D+ YTSLV GL G ++A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
L M R I PD I +L+ + G +A EL NEM+
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 122/250 (48%), Gaps = 3/250 (1%)
Query: 5 NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
+I ++ Y ++I G C+E ++++ + M+ G + V T+L++ + K + +A
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 65 LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
+ + EM + +T+ LI G + G A + F M G+ PN+ Y L+
Sbjct: 337 MKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHC 396
Query: 125 LCKKNCIERARNLFDEMPKRDM---IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
LC +++A +F++M KR+M P+ Y L+ G + ++AL + M + +
Sbjct: 397 LCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREM 456
Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
D+ + YT ++ G+ + G ++ A LF + +G+ P+ + +++ + G EA
Sbjct: 457 DIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHV 516
Query: 242 LQNEMMGRGL 251
L +M G+
Sbjct: 517 LFRKMKEDGV 526
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%)
Query: 62 SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
+EAL L M++SR +++ F L++ + K I+ + G+ ++ L
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
++ C+ + A + +M K PD +T+LI+G+ +EA+++ N+M E+G+
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
D+ YT+++ L + GH+ A LF +M GI PD ++ SL+ G +A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 242 LQNEMMGRGL 251
L M R +
Sbjct: 234 LLRGMTKRKI 243
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 59 GEPSEALSLLDEMLDSRIEVTVVTFC----VLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
G +ALS +LD + V FC +L +GL S EA+D F M + P+
Sbjct: 16 GNSGKALSF-SRLLD--LSFWVRAFCNYREILRNGL-HSLQFNEALDLFTHMVESRPLPS 71
Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKN 174
+ +T L++ + K + NL D + + D L++ + + A +
Sbjct: 72 IIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLG 131
Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
+M ++G + D+ +TSL+ G ++EA + ++M+ GI PD ++ +++ + G
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 235 NMDEAIELQNEMMGRGL 251
+++ A+ L ++M G+
Sbjct: 192 HVNYALSLFDQMENYGI 208
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 129/247 (52%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
I DL Y +I LC S+F + ++ +M + G + V ++L++ + + +A+
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
L+ +M + VV + +IDG CK GLV +A++ F RM G+ + Y +L+ GL
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
C A L +M RD++P+ +TA+ID ++K F EA+ L MT VD D+
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
Y SL+ GL G + EA+ + M+ +G LPD + +L+ + +DE +L E
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 246 MMGRGLL 252
M RGL+
Sbjct: 340 MAQRGLV 346
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 133/284 (46%), Gaps = 32/284 (11%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ ++AD Y +++ GLC ++ D+ L+ +M + N + T ++D + K G+
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
SEA+ L +EM ++ V T+ LI+GLC G V EA M G P+V Y
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK-------HESF------- 166
LI+G CK ++ LF EM +R ++ DT Y +I GY + E F
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP 379
Query: 167 ------------------KEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
++AL L M + ++LD+ Y ++ G+ + G++++A LF
Sbjct: 380 NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
+ +G+ PD + +++ + D++ L +M GLL
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 121/243 (49%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
+ D+ ++I G C ++ D+ L+S+M+E G + VI T++D K G ++A+
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
L D M + VT+ L+ GLC SG +A M + PNV +TA+ID
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
K+ A L++EM +R + PD Y +LI+G H EA + + M G D+
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y +L+ G + + E LF EM RG++ D I ++++ +++ G D A E+ + M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 247 MGR 249
R
Sbjct: 376 DSR 378
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + D+ +Y TII G C D+ L M+ +G+ A+ V +L+ +G
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A L+ +M+ I V+TF +ID K G EA+ + M + P+V Y +
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+GLC ++ A+ + D M + +PD Y LI+G+ K + E L M + G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
+ D Y +++ G + G A+ +F M R
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + D+ Y ++I GLC+ + +++K +L M G + V TL++ + K+
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
E L EM + +T+ +I G ++G A + F RM PN+ Y+
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSI 386
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+ GLC +E+A LF+ M K ++ D T Y +I G K + ++A +L ++ G
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILP 218
+ D+ +YT+++ G R ++ +L+ +M G+LP
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 5/238 (2%)
Query: 17 IWGLCIESK-----FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
WG +K E+ L +M ++ + V + ++ K+ +SL M
Sbjct: 36 FWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM 95
Query: 72 LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
I + ++ ++I+ LC+ A+ G+M FG P+V ++LI+G C+ N +
Sbjct: 96 EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155
Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
A +L +M + PD Y +IDG K +A+ L +RM GV D Y SL
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215
Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
V GL G +A L +M+ R I+P+ I +++ + G EA++L EM R
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR 273
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 91/190 (47%)
Query: 63 EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
E + L +M+ SR ++V F ++ + KS I F M G+ ++ Y +I
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111
Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
+ LC+ + A ++ +M K PD ++LI+G+ + +A++L ++M E+G
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
D+ Y +++ G + G + +A LF M G+ D + SL+ G +A L
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 243 QNEMMGRGLL 252
+M+ R ++
Sbjct: 232 MRDMVMRDIV 241
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 131/262 (50%), Gaps = 13/262 (4%)
Query: 2 KGKNIKADLPLYG---------TIIWGLCI---ESKFEDSKLLLSEMKENGLTANTVICT 49
K +++ D+ +YG T+I G C K + +L EM EN ++ N
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFN 300
Query: 50 TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDF 109
L+D ++K ++ + EMLD ++ V+++ LI+GLC G + EAI +M
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 110 GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA 169
G+ PN+ Y ALI+G CK + ++ A ++F + + +P T Y LID Y K +
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 170 LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
LK M G+ D+ Y L+ GL R G+++ A+ LF ++ +G LPD + L++
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEG 479
Query: 230 HYERGNMDEAIELQNEMMGRGL 251
+ +G +A L EM GL
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGL 501
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 125/242 (51%), Gaps = 1/242 (0%)
Query: 5 NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
++ +L + +I G + S + EM + + N + +L++ G+ SEA
Sbjct: 291 DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEA 350
Query: 65 LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
+S+ D+M+ + ++ ++T+ LI+G CK+ +++EA+D FG + G P +Y LID
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
CK I+ L +EM + ++PD Y LI G ++ + + A L +++T G+ D
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-D 469
Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
L + L+ G R G ++A +L EM G+ P + ++K + + GN+ A ++
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRT 529
Query: 245 EM 246
+M
Sbjct: 530 QM 531
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 40 GLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA 99
G + + C LM A K ++ + EM+ +I+ V TF V+I+ LCK+G + +A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 100 IDYFGRMPDFGLHPNVAVYTALIDGLCK---KNCIERARNLFDEMPKRDMIPDTTAYTAL 156
D M +G PNV Y LIDG CK + +A + EM + D+ P+ T + L
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
IDG+ K ++ ++ + M + V ++ +Y SL+ GL G + EA + +M+ G+
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGSK 256
P+ I +L+ + + EA+++ + G+G + ++
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 16 IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
++ L E++ D + + EM + N +++A K G+ ++A ++++M
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 76 IEVTVVTFCVLIDGLCK---SGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
VV++ LIDG CK +G + +A M + + PN+ + LIDG K + +
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
+ +F EM +D+ P+ +Y +LI+G EA++++++M GV +L Y +L+
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
G + L+EA +F + G+G +P + L+ + + G +D+ L+ EM G++
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 18/220 (8%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
+KG+ +Y +I C K +D L EM+ G+ + L+ + G
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A L D+ L S+ +VTF +L++G C+ G R+A M GL P Y
Sbjct: 452 IEAAKKLFDQ-LTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 121 LIDGLCKKNCIERARNLFDEMPK-RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
++ G CK+ ++ A N+ +M K R + + +Y L+ GY + ++A L N M E
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
G+ + Y ++ EM+ +G +PD
Sbjct: 571 GLVPNRITY----------------EIVKEEMVDQGFVPD 594
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 132/249 (53%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
K D + T+I GL + +K ++ L+ +M + G + V T+++ K G+ ALS
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL +M +IE VV + +IDGLCK + +A++ F M + G+ P+V Y++LI LC
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
A L +M +R + P+ ++ALID ++K EA L + M + +D D+
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y+SL+ G L EA+ +F MI + P+ + +L+K + ++E +EL EM
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 247 MGRGLLSGS 255
RGL+ +
Sbjct: 425 SQRGLVGNT 433
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 111/219 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K I+ D+ Y ++I LC ++ D+ LLS+M E + N V + L+DA+ K G+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L DEM+ I+ + T+ LI+G C + EA F M PNV Y+
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI G CK +E LF EM +R ++ +T YT LI G+ + A + +M VG
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
V ++ Y L+ GL + G L +A V+F + + PD
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 1/218 (0%)
Query: 2 KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
KGK I+AD+ +Y TII GLC +D+ L +EM G+ + ++L+ G
Sbjct: 251 KGK-IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Query: 62 SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
S+A LL +M++ +I VVTF LID K G + EA + M + P++ Y++L
Sbjct: 310 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
I+G C + ++ A+++F+ M +D P+ Y+ LI G+ K + +E + L M++ G+
Sbjct: 370 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
+ YT+L+ G + A+++F +M+ G+ P+
Sbjct: 430 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 128/251 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + DL YGT++ GLC + + LL +M++ + A+ VI T++D K
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+AL+L EM + I V T+ LI LC G +A M + ++PNV ++A
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID K+ + A L+DEM KR + PD Y++LI+G+ H+ EA ++ M
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
++ Y++L+ G + ++E LF EM RG++ + + +L+ ++ + D A
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 241 ELQNEMMGRGL 251
+ +M+ G+
Sbjct: 454 MVFKQMVSVGV 464
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 126/251 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I DL Y I C S+ + +L++M + G + V ++L++ Y +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A++L+D+M++ + TF LI GL EA+ +M G P++ Y
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+++GLCK+ I+ A +L +M K + D Y +IDG K++ +ALNL M G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ D+ Y+SL+ L G +A L +MI R I P+ + +L+ + G + EA
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 241 ELQNEMMGRGL 251
+L +EM+ R +
Sbjct: 349 KLYDEMIKRSI 359
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 118/251 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M ++I D+ Y ++I G C+ + +++K + M N V +TL+ + KA
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
E + L EM + VT+ LI G ++ A F +M G+HPN+ Y
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DGLCK + +A +F+ + + M PD Y +I+G K ++ L ++ G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V ++ AY +++ G R G +EA L +M G LP+ +L++ G+ + +
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593
Query: 241 ELQNEMMGRGL 251
EL EM G
Sbjct: 594 ELIKEMRSCGF 604
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 118/240 (49%), Gaps = 1/240 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K+ ++ Y T+I G C + E+ L EM + GL NTV TTL+ +F+A +
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A + +M+ + ++T+ +L+DGLCK+G + +A+ F + + P++ Y
Sbjct: 449 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 508
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I+G+CK +E LF + + + P+ AY +I G+ + S +EA +L +M E G
Sbjct: 509 MIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ Y +L+ R G + + L EM G D I L+ G +D++
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS-TIGLVTNMLHDGRLDKSF 627
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 113/228 (49%)
Query: 24 SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
+KFE L +M+ G++ + + ++ + + + S AL++L +M+ E +VT
Sbjct: 97 NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 156
Query: 84 CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
L++G C S + +A+ +M + G P+ +T LI GL N A L D+M +
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
R PD Y +++G K AL+L +M + ++ D+ Y +++ GL + H+ +
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
A LF EM +GI PD SL+ G +A L ++M+ R +
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI 324
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
K +D+ L +M ++ + V L+ A K + +SL ++M I + T+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
+ I+ C+ + A+ +M G P++ ++L++G C I A L D+M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
PDT +T LI G H EA+ L ++M + G DL Y ++V GL + G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L +M I D ++ +++ + +MD+A+ L EM +G+
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 130/248 (52%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K I+ ++ Y ++ GLC S++ D+ LLS+M + +T N + + L+DA+ K G+ E
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
A L +EM+ I+ +VT+ LI+GLC + EA F M G +V Y LI+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
G CK +E LF EM +R ++ +T Y LI G+ + +A ++M G+
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
D+ Y L+ GL G L++A V+F +M R + D + ++++ + G ++EA L
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 244 NEMMGRGL 251
+ +GL
Sbjct: 459 CSLSLKGL 466
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 134/250 (53%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
I+ DL + +I C + + +L +M + G + V +L++ + + S+A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
SL+D+M++ + +V + +ID LCK+ V +A D+F + G+ PNV YTAL++GL
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
C + A L +M K+ + P+ Y+AL+D ++K+ EA L M + +D D+
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
Y+SL+ GL + EA +F M+ +G L D + +L+ + +++ ++L E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 246 MMGRGLLSGS 255
M RGL+S +
Sbjct: 356 MSQRGLVSNT 365
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 123/243 (50%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
K D+ Y II LC + D+ E++ G+ N V T L++ + S+A
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL +M+ +I V+T+ L+D K+G V EA + F M + P++ Y++LI+GLC
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
+ I+ A +FD M + + D +Y LI+G+ K + ++ + L M++ G+ +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y +L+ G + G + +A+ F +M GI PD LL + G +++A+ + +M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 247 MGR 249
R
Sbjct: 427 QKR 429
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 119/233 (51%)
Query: 14 GTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLD 73
G+++ G C ++ D+ L+ +M E G + V ++D+ K ++A E+
Sbjct: 159 GSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218
Query: 74 SRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIER 133
I VVT+ L++GLC S +A M + PNV Y+AL+D K +
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 134 ARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVW 193
A+ LF+EM + + PD Y++LI+G H+ EA + + M G D+ +Y +L+
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
G + +++ LF EM RG++ + + +L++ ++ G++D+A E ++M
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 114/216 (52%)
Query: 5 NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
+I D+ Y ++I GLC+ + +++ + M G A+ V TL++ + KA +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 65 LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
+ L EM + VT+ LI G ++G V +A ++F +M FG+ P++ Y L+ G
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
LC +E+A +F++M KR+M D YT +I G K +EA +L ++ G+ D
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
+ YT+++ GL G L E L+ +M G++ ++
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 8/208 (3%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K AD+ Y T+I G C + ED L EM + GL +NTV TL+ +F+AG+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A +M I + T+ +L+ GLC +G + +A+ F M + ++ YT
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I G+CK +E A +LF + + + PD YT ++ G E L +M + G
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Query: 181 V--------DLDLNAYTSLVWGLSRCGH 200
+ D D+ L+ + CG+
Sbjct: 501 LMKNDCTLSDGDITLSAELIKKMLSCGY 528
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
K D+ L S+M ++ + V L+ A K + +SL +M I + TF
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
++I+ C V A+ G+M G P+ +L++G C++N + A +L D+M +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
PD AY A+ID K + +A + + G+ ++ YT+LV GL +A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
L +MI + I P+ I +LL + G + EA EL EM+
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 127/246 (51%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
+ D + T+I GL + +K ++ L+ M + G N V +++ K G+ AL+
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL++M ++IE VV F +ID LCK V +A++ F M G+ PNV Y++LI LC
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
A L +M ++ + P+ + ALID ++K F EA L + M + +D D+
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y SLV G L +A+ +F M+ + PD + +L+K + +++ EL EM
Sbjct: 367 TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Query: 247 MGRGLL 252
RGL+
Sbjct: 427 SHRGLV 432
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 126/246 (51%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I+AD+ ++ TII LC +D+ L EM+ G+ N V ++L+ G
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A LL +M++ +I +VTF LID K G EA + M + P++ Y +
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L++G C + +++A+ +F+ M +D PD Y LI G+ K + ++ L M+ G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ D YT+L+ GL G A+ +F +M+ G+ PD + LL G +++A+
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 241 ELQNEM 246
E+ + M
Sbjct: 491 EVFDYM 496
Score = 117 bits (294), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 125/251 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + +L YG ++ GLC + + LL++M+ + A+ VI T++D+ K
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+AL+L EM I VVT+ LI LC G +A M + ++PN+ + A
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID K+ A L+D+M KR + PD Y +L++G+ H+ +A + M
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
D+ Y +L+ G + +++ LF EM RG++ D + +L++ + G+ D A
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 241 ELQNEMMGRGL 251
++ +M+ G+
Sbjct: 456 KVFKQMVSDGV 466
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K I+ ++ Y ++I LC ++ D+ LLS+M E + N V L+DA+ K G+
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L D+M+ I+ + T+ L++G C + +A F M P+V Y
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI G CK +E LF EM R ++ DT YT LI G A + +M G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V D+ Y+ L+ GL G L++A +F M I D + ++++ + G +D+
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 241 EL 242
+L
Sbjct: 526 DL 527
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 116/239 (48%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y +I C S+ + LL +M + G + V ++L++ Y S+A++L+D+M+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ +TF LI GL EA+ RM G PN+ Y +++GLCK+ +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A NL ++M + D + +ID K+ +ALNL M G+ ++ Y+SL+
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L G +A L +MI + I P+ + +L+ + G EA +L ++M+ R +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K+ D+ Y T+I G C + ED L EM GL +TV TTL+ F G+
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 450
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A + +M+ + ++T+ +L+DGLC +G + +A++ F M + ++ +YT
Sbjct: 451 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 510
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I+G+CK ++ +LF + + + P+ Y +I G +EA L +M E G
Sbjct: 511 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
+ Y +L+ R G + L EM
Sbjct: 571 PLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M ++I D+ Y +++ G C+ + + +K + M + V TL+ + K+
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 415
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ L EM + VT+ LI GL G A F +M G+ P++ Y+
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DGLC +E+A +FD M K ++ D YT +I+G K + +L ++ G
Sbjct: 476 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V ++ Y +++ GL LQEA L +M G LP+ +L++ H G+ +
Sbjct: 536 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 595
Query: 241 ELQNEM 246
EL EM
Sbjct: 596 ELIREM 601
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
K +D+ L M ++ + V L+ A K + +SL ++M I + T+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
+LI+ C+ + A+ G+M G P++ ++L++G C I A L D+M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
PDT +T LI G H EA+ L +RM + G +L Y +V GL + G A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L ++M I D ++ +++ + ++D+A+ L EM +G+
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K +K ++ Y T+I GLC + +++ LL +MKE+G N+ TL+ A+ + G+ +
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAA 593
Query: 64 ALSLLDEMLDSRI 76
+ L+ EM R
Sbjct: 594 SAELIREMRSCRF 606
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 133/251 (52%), Gaps = 1/251 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ IK ++ Y +I LC + KFE ++ LL +M E GL N + L++ Y K G
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A+ +++ M ++ T+ LI G CKS V +A+ +M + + P+V Y +
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LIDG C+ + A L M R ++PD YT++ID K + +EA +L + + + G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V+ ++ YT+L+ G + G + EA ++ +M+ + LP+ + +L+ G + EA
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 241 ELQNEMMGRGL 251
L+ +M+ GL
Sbjct: 588 LLEEKMVKIGL 598
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 128/243 (52%), Gaps = 1/243 (0%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y +I LC + ++ L+ EM+E G+ N T L+D+ + +A LL +ML
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ + V+T+ LI+G CK G++ +A+D M L PN Y LI G CK N +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VH 444
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
+A + ++M +R ++PD Y +LIDG + +F A L + M + G+ D YTS++
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
L + ++EA LF + +G+ P+ ++ +L+ + + G +DEA + +M+ + L
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 253 SGS 255
S
Sbjct: 565 PNS 567
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 121/247 (48%), Gaps = 1/247 (0%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
+ D Y ++I G C + + + +EM G N V T L+ A EA+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
L +M D TV T+ VLI LC S EA++ M + G+ PN+ YT LID L
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
C + E+AR L +M ++ ++P+ Y ALI+GY K ++A+++ M + +
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
Y L+ G + ++ +A + ++M+ R +LPD + SL+ GN D A L +
Sbjct: 429 RTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 246 MMGRGLL 252
M RGL+
Sbjct: 488 MNDRGLV 494
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 125/251 (49%), Gaps = 1/251 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + + + Y +I G C +S + +L++M E + + V +L+D ++G
Sbjct: 419 MESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A LL M D + T+ +ID LCKS V EA D F + G++PNV +YTA
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LIDG CK ++ A + ++M ++ +P++ + ALI G KEA L+ +M ++G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ ++ T L+ L + G A F +M+ G PD + ++ + G + +A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 241 ELQNEMMGRGL 251
++ +M G+
Sbjct: 658 DMMAKMRENGV 668
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + D Y ++I LC + E++ L +++ G+ N V+ T L+D Y KAG+
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA +L++ML +TF LI GLC G ++EA +M GL P V+ T
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI L K + A + F +M PD YT I Y + +A ++ +M E G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
V DL Y+SL+ G G A + M G P + +SL+K
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIK 715
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 118/244 (48%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y T++ L ++ K + EM E+ + N +++ Y K G EA + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
++ ++ T+ LI G C+ + A F MP G N YT LI GLC I+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A +LF +M + P YT LI E EALNL M E G+ +++ YT L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
L ++AR L +M+ +G++P+ I +L+ + +RG +++A+++ M R L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 253 SGSK 256
++
Sbjct: 426 PNTR 429
Score = 104 bits (259), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + D+ Y ++I G C F+ + LLS M + GL + T+++D+ K+
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L D + + VV + LIDG CK+G V EA +M PN + A
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI GLC ++ A L ++M K + P + T LI LK F A + +M G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
D + YT+ + R G L +A + +M G+ PD SL+K + + G + A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 241 ELQNEMMGRG 250
++ M G
Sbjct: 693 DVLKRMRDTG 702
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%)
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
DE + + ++ + + L++ L + GLV E + M + + PN+ Y +++G CK
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL 231
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
+E A ++ + + PD YT+LI GY + + A + N M G + AY
Sbjct: 232 GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY 291
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
T L+ GL + EA LF +M P L+K EA+ L EM
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351
Query: 249 RGL 251
G+
Sbjct: 352 TGI 354
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 100/269 (37%), Gaps = 54/269 (20%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K D Y T I C E + D++ ++++M+ENG++ + ++L+ Y G+
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLID-------------------------------- 88
+ A +L M D+ E + TF LI
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 89 ---------------------GLCKSGLVREAIDYFGRMP-DFGLHPNVAVYTALIDGLC 126
G+C+ G +R A F M + G+ P+ V+ AL+ C
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
K A + D+M +P + LI G K + ++ + + G D
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDEL 867
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
A+ ++ G+ + G ++ LF+ M G
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKEN-GLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
Y +I G+C ++ + M+ N G++ + ++ L+ K + +EA ++D+M
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Query: 72 LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
+ + + VLI GL K G F + G + + + +IDG+ K+ +
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882
Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDG 159
E LF+ M K + Y+ LI+G
Sbjct: 883 EAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 128 bits (321), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 130/249 (52%), Gaps = 1/249 (0%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
+L + ++++G C E K ++K +L +MKE GL + V+ T L+ Y AG+ ++A L+
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKS-GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCK 127
++M E V + VLI LC++ + EA+ F M +G ++ YTALI G CK
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 128 KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNA 187
I++ ++ D+M K+ ++P Y ++ + K E F+E L L +M G DL
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 188 YTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
Y ++ + G ++EA L++EM G+ P + ++ +G + EA EM+
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474
Query: 248 GRGLLSGSK 256
RG+ S +
Sbjct: 475 SRGIFSAPQ 483
Score = 94.0 bits (232), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 119/255 (46%), Gaps = 2/255 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M ++ D ++G ++ LC +++ + +M+E N T+L+ + + G+
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGK 251
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA +L +M ++ +E +V F L+ G +G + +A D M G PNV YT
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 121 LIDGLCK-KNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
LI LC+ + ++ A +F EM + D YTALI G+ K + ++ + M +
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
GV Y ++ + +E L +M RG PD ++ +++ + G + EA
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEA 431
Query: 240 IELQNEMMGRGLLSG 254
+ L NEM GL G
Sbjct: 432 VRLWNEMEANGLSPG 446
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 13/240 (5%)
Query: 17 IWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRI 76
+WGL E + + +L+ E+ LM + A +A+ +LDEM +
Sbjct: 150 VWGLIEEMRKTNPELIEPEL-----------FVVLMRRFASANMVKKAVEVLDEMPKYGL 198
Query: 77 EVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARN 136
E F L+D LCK+G V+EA F M + PN+ +T+L+ G C++ + A+
Sbjct: 199 EPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKE 257
Query: 137 LFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLS 196
+ +M + + PD +T L+ GY +A +L N M + G + ++N YT L+ L
Sbjct: 258 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALC 317
Query: 197 RC-GHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
R + EA +F EM G D + +L+ + G +D+ + ++M +G++
Sbjct: 318 RTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQ 377
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
+AD+ Y +I G C + +L +M++ G+ + V +M A+ K + E L
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
L+++M ++ + V+I CK G V+EA+ + M GL P V + +I+G
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFT 458
Query: 127 KKNCIERARNLFDEMPKRDMI--PDTTAYTALIDGYLKHESFKEALNLKNRMTE--VGVD 182
+ + A N F EM R + P +L++ ++ + + A ++ + ++ +
Sbjct: 459 SQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCE 518
Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK 228
L+++A+T + L GH++EA +M+ ++P L+K
Sbjct: 519 LNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMK 564
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 127 bits (320), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 126/239 (52%), Gaps = 1/239 (0%)
Query: 2 KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
KGK I+AD+ +Y TII LC D+ L +EM G+ N V +L+ G
Sbjct: 248 KGK-IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 62 SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
S+A LL +M++ +I VVTF LID K G + EA + M + P++ Y++L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
I+G C + ++ A+++F+ M +D P+ Y LI G+ K + +E + L M++ G+
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ Y +L+ GL + G A+ +F +M+ G+ PD I LL + G +++A+
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Score = 127 bits (318), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 133/251 (52%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + DL YGT++ GLC + + LL +M++ + A+ VI TT++DA
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
++AL+L EM + I VVT+ LI LC G +A M + ++PNV ++A
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID K+ + A L+DEM KR + PD Y++LI+G+ H+ EA ++ M
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
++ Y +L+ G + ++E LF EM RG++ + + +L++ ++ G+ D A
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ 450
Query: 241 ELQNEMMGRGL 251
++ +M+ G+
Sbjct: 451 KIFKKMVSDGV 461
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 124/243 (51%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
+ T+I GL + +K ++ L+ M G + T+++ K G+ ALSLL +M
Sbjct: 188 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 247
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+IE VV + +ID LC V +A++ F M + G+ PNV Y +LI LC
Sbjct: 248 KGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 307
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A L +M +R + P+ ++ALID ++K EA L + M + +D D+ Y+SL+
Sbjct: 308 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 367
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
G L EA+ +F MI + P+ + +L+K + ++E +EL EM RGL+
Sbjct: 368 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Query: 253 SGS 255
+
Sbjct: 428 GNT 430
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 109/219 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K I+ ++ Y ++I LC ++ D+ LLS+M E + N V + L+DA+ K G+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L DEM+ I+ + T+ LI+G C + EA F M PNV Y
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI G CK +E LF EM +R ++ +T Y LI G + A + +M G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
V D+ Y+ L+ GL + G L++A V+F + + PD
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 123/251 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I DL Y +I C S+ + +L +M + G + V ++L++ Y
Sbjct: 106 MQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR 165
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
SEA++L+D+M + VTF LI GL EA+ RM G P++ Y
Sbjct: 166 ISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGT 225
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+++GLCK+ I+ A +L +M K + D YT +ID +++ +ALNL M G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ ++ Y SL+ L G +A L +MI R I P+ + +L+ + G + EA
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 241 ELQNEMMGRGL 251
+L +EM+ R +
Sbjct: 346 KLYDEMIKRSI 356
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 122/252 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M ++I D+ Y ++I G C+ + +++K + M N V TL+ + KA
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
E + L EM + VT+ LI GL ++G A F +M G+ P++ Y+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DGLCK +E+A +F+ + K M PD Y +I+G K ++ +L ++ G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V ++ YT+++ G R G +EA LF EM G LP+ +L++ G+ +
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 241 ELQNEMMGRGLL 252
EL EM G +
Sbjct: 591 ELIKEMRSCGFV 602
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K+ ++ Y T+I G C + E+ L EM + GL NTV TL+ F+AG+
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGD 445
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A + +M+ + ++T+ +L+DGLCK G + +A+ F + + P++ Y
Sbjct: 446 CDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I+G+CK +E +LF + + + P+ YT +I G+ + +EA L M E G
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
+ Y +L+ R G + L EM G + D
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
K +D+ L EM ++ + V L+ A K + +SL + M + RI + ++
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
+LI+ C+ + A+ G+M G P++ ++L++G C I A L D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
+ P+T + LI G H EA+ L +RM G DL Y ++V GL + G + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L +M I D ++ +++ N+++A+ L EM +G+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 127 bits (319), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 127/249 (51%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
+ D + T+I GL + +K ++ L+ M + G N V +++ K G+ A +
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL++M ++IE VV + +ID LCK +A++ F M + G+ PNV Y++LI LC
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
A L +M +R + P+ + ALID ++K EA L + M + +D D+
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y+SL+ G L EA+ +F MI + P+ + +L+ + +DE +EL EM
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 247 MGRGLLSGS 255
RGL+ +
Sbjct: 427 SQRGLVGNT 435
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 108/208 (51%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K ++ ++ Y ++I LC ++ D+ LLS+M E + N V L+DA+ K G+
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L DEM+ I+ + T+ LI+G C + EA F M PNV Y
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G CK I+ LF EM +R ++ +T YT LI G+ + A + +M G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
V ++ Y +L+ GL + G L++A V+F
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVF 493
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 128/240 (53%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I+A++ +Y T+I LC +D+ L +EM+ G+ N + ++L+
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A LL +M++ +I VVTF LID K G + EA + M + P++ Y++
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G C + ++ A+++F+ M +D P+ Y LI+G+ K + E + L M++ G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ + YT+L+ G + A+++F +M+ G+ P+ + +LL + G +++A+
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 126/251 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + +L YG ++ GLC + + LL++M+ + AN VI +T++D+ K
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+AL+L EM + + V+T+ LI LC +A M + ++PNV + A
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID K+ + A L+DEM KR + PD Y++LI+G+ H+ EA ++ M
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
++ Y +L+ G + + E LF EM RG++ + + +L+ ++ + D A
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 241 ELQNEMMGRGL 251
+ +M+ G+
Sbjct: 456 MVFKQMVSDGV 466
Score = 110 bits (275), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 123/251 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I +L Y +I C S+ + LL +M + G + V ++L++ Y
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A++L+D+M++ +TF LI GL EA+ RM G PN+ Y
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+++GLCK+ I+ A NL ++M + + Y+ +ID K+ +ALNL M G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V ++ Y+SL+ L +A L +MI R I P+ + +L+ + G + EA
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 241 ELQNEMMGRGL 251
+L +EM+ R +
Sbjct: 351 KLYDEMIKRSI 361
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M ++I D+ Y ++I G C+ + +++K + M N V TL++ + KA
Sbjct: 356 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKR 415
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
E + L EM + VT+ LI G ++ A F +M G+HPN+ Y
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DGLCK +E+A +F+ + + M P Y +I+G K ++ +L ++ G
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
V D+ Y +++ G R G +EA LF +M G LPD
Sbjct: 536 VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 123/257 (47%), Gaps = 19/257 (7%)
Query: 12 LYGTIIWGLCIESKFEDSKLLLS---------------EMKENGLTANTVICTTLMDAYF 56
L+G ++ + S FE +KLL + +M+ G++ N L++ +
Sbjct: 72 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC 131
Query: 57 KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
+ + S AL+LL +M+ E ++VT L++G C + +A+ +M + G P+
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
+T LI GL N A L D M +R P+ Y +++G K A NL N+M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLK--KHYERG 234
++ ++ Y++++ L + H +A LF EM +G+ P+ I SL+ +YER
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER- 310
Query: 235 NMDEAIELQNEMMGRGL 251
+A L ++M+ R +
Sbjct: 311 -WSDASRLLSDMIERKI 326
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%)
Query: 63 EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
+A+ L M+ SR ++ F L+ + K I +M G+ N+ Y LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
+ C+++ I A L +M K P ++L++GY + +A+ L ++M E+G
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
D +T+L+ GL EA L M+ RG P+ + ++ +RG++D A L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 243 QNEM 246
N+M
Sbjct: 248 LNKM 251
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 68/153 (44%)
Query: 98 EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
+AI FG M P++ + L+ + K + +L ++M + + + Y LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
+ + + AL L +M ++G + + +SL+ G + +A L +M+ G
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
PD I +L+ + EA+ L + M+ RG
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 127 bits (319), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 125/246 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I+AD+ ++ TII LC +D+ L EM+ G+ N V ++L+ G
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A LL +M++ +I +VTF LID K G EA M + P++ Y +
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G C + +++A+ +F+ M +D PD Y LI G+ K + ++ L M+ G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ D YT+L+ GL G A+ +F +M+ G+ PD + LL G +++A+
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 241 ELQNEM 246
E+ + M
Sbjct: 416 EVFDYM 421
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 125/246 (50%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
+ D + T+I GL + +K ++ L+ M + G N V +++ K G+ A +
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL++M ++IE VV F +ID LCK V +A++ F M G+ PNV Y++LI LC
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
A L +M ++ + P+ + ALID ++K F EA L + M + +D D+
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y SL+ G L +A+ +F M+ + PD +L+K + +++ EL EM
Sbjct: 292 TYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 247 MGRGLL 252
RGL+
Sbjct: 352 SHRGLV 357
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 125/251 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + +L YG ++ GLC + + LL++M+ + A+ VI T++D+ K
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+AL+L EM I VVT+ LI LC G +A M + ++PN+ + A
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID K+ A L D+M KR + PD Y +LI+G+ H+ +A + M
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
DL+ Y +L+ G + +++ LF EM RG++ D + +L++ + G+ D A
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 380
Query: 241 ELQNEMMGRGL 251
++ +M+ G+
Sbjct: 381 KVFKQMVSDGV 391
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K I+ ++ Y ++I LC ++ D+ LLS+M E + N V L+DA+ K G+
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L D+M+ I+ + T+ LI+G C + +A F M P++ Y
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI G CK +E LF EM R ++ DT YT LI G A + +M G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V D+ Y+ L+ GL G L++A +F M I D + ++++ + G +D+
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 241 EL 242
+L
Sbjct: 451 DL 452
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I +L Y +I C S+ + LL +M + G + V ++L++ Y
Sbjct: 36 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 95
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A++L+D+M++ +TF LI GL EA+ RM G PN+ Y
Sbjct: 96 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+++GLCK+ I+ A NL ++M + D + +ID K+ +ALNL M G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ ++ Y+SL+ L G +A L +MI + I P+ + +L+ + G EA
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 241 ELQNEMMGRGL 251
+L ++M+ R +
Sbjct: 276 KLHDDMIKRSI 286
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K+ DL Y T+I G C + ED L EM GL +TV TTL+ F G+
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 375
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A + +M+ + ++T+ +L+DGLC +G + +A++ F M + ++ +YT
Sbjct: 376 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 435
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I+G+CK ++ +LF + + + P+ Y +I G +EA L +M E G
Sbjct: 436 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
D Y +L+ R G + L EM
Sbjct: 496 PLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 113/246 (45%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M ++I D+ Y ++I G C+ + + +K + M + TL+ + K+
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ L EM + VT+ LI GL G A F +M G+ P++ Y+
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DGLC +E+A +FD M K ++ D YT +I+G K + +L ++ G
Sbjct: 401 LLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 460
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V ++ Y +++ GL LQEA L +M G LPD +L++ H G+ +
Sbjct: 461 VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA 520
Query: 241 ELQNEM 246
EL EM
Sbjct: 521 ELIREM 526
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 115/239 (48%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
+ ++ + KF+ L +M+ G++ N L++ + + + S AL+LL +M+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
E ++VT L++G C + +A+ +M + G P+ +T LI GL N
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A L D M +R P+ Y +++G K A NL N+M ++ D+ + +++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L + H+ +A LF EM +GI P+ + SL+ G +A +L ++M+ + +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%)
Query: 71 MLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNC 130
M+ SR ++ F L+ + K I +M G+ N+ Y LI+ C+++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTS 190
I A L +M K P ++L++GY + +A+ L ++M E+G D +T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 191 LVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
L+ GL EA L M+ RG P+ + ++ +RG++D A L N+M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 62/138 (44%)
Query: 113 PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNL 172
P++ + L+ + K + +L ++M + + + Y LI+ + + AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
+M ++G + + +SL+ G + +A L +M+ G PD I +L+ +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 233 RGNMDEAIELQNEMMGRG 250
EA+ L + M+ RG
Sbjct: 128 HNKASEAVALVDRMVQRG 145
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K +K ++ Y T+I GLC + +++ LL +MKE+G ++ TL+ A+ + G+ +
Sbjct: 459 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 518
Query: 64 ALSLLDEMLDSRI 76
+ L+ EM R
Sbjct: 519 SAELIREMRSCRF 531
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 125/243 (51%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y ++I G + E +L M E G++ N V T+L+ Y K G EA + + +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ ++ + VL+DG C++G +R+A+ M + G+ N + +LI+G CK +
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A +F M + PD Y L+DGY + EAL L ++M + V + Y L+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
G SR G + L+ M+ RG+ DEI C +LL+ ++ G+ +EA++L ++ RGLL
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 253 SGS 255
+ +
Sbjct: 504 TDT 506
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 117/221 (52%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + ++ Y ++I G C + E+++ + +KE L A+ + LMD Y + G+
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A+ + D M++ + LI+G CKSG + EA F RM D+ L P+ Y
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DG C+ ++ A L D+M +++++P Y L+ GY + +F + L+L M + G
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEI 221
V+ D + ++L+ L + G EA L+ ++ RG+L D I
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTI 507
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 131/261 (50%), Gaps = 8/261 (3%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
++ + + + YG +I G C + + EM E G+T N IC+ + ++ F+ +
Sbjct: 602 LRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDK 661
Query: 61 PSEALSLLDEMLDSRIEV----TVVTFCVLIDGLC-KSGLVREAIDYFGRMPDFGLHPNV 115
EA LL +++D + + ++ F C K+ + E+++ P L PN
Sbjct: 662 IDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVE--NSTPKKLLVPNN 719
Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKRD-MIPDTTAYTALIDGYLKHESFKEALNLKN 174
VY I GLCK +E AR LF ++ D IPD YT LI G +A L++
Sbjct: 720 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRD 779
Query: 175 RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERG 234
M G+ ++ Y +L+ GL + G++ A+ L H++ +GI P+ I +L+ + G
Sbjct: 780 EMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839
Query: 235 NMDEAIELQNEMMGRGLLSGS 255
N+ EA+ L+ +M+ +GL+ GS
Sbjct: 840 NVAEAMRLKEKMIEKGLVRGS 860
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K + + Y ++ G F D L M + G+ A+ + C+TL++A FK G+
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGD 486
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+EA+ L + +L + +T V+I GLCK V EA + + F P V Y A
Sbjct: 487 FNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQA 546
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L G K ++ A + + M ++ + P Y LI G K+ + +L + G
Sbjct: 547 LSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARG 606
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ + Y +L+ G G + +A EMI +GI + +C + + +DEA
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEAC 666
Query: 241 ELQNEMMGRGLL 252
L +++ LL
Sbjct: 667 LLLQKIVDFDLL 678
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 58/291 (19%)
Query: 14 GTIIWGLCI----ESKFEDS--KLLLSEMKENGLTANTVICTTLMDAY------------ 55
G ++WG + E F + ++L E GL N + M Y
Sbjct: 137 GFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSL 196
Query: 56 ----FKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR------ 105
+ GE AL + D+M+ + V T ++++ C+SG V +A+ +
Sbjct: 197 LSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLG 256
Query: 106 ------------------------------MPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
M + G+ NV YT+LI G CKK +E A
Sbjct: 257 LELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAE 316
Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
++F+ + ++ ++ D Y L+DGY + ++A+ + + M E+GV + SL+ G
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
+ G L EA +F M + PD +L+ + G +DEA++L ++M
Sbjct: 377 CKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 121/286 (42%), Gaps = 35/286 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICT----------- 49
+K K + AD +YG ++ G C + D+ + M E G+ NT IC
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 50 ------------------------TLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
TL+D Y +AG EAL L D+M + TV+T+ +
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNI 441
Query: 86 LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
L+ G + G + + + M G++ + + L++ L K A L++ + R
Sbjct: 442 LLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARG 501
Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
++ DT +I G K E EA + + + + Y +L G + G+L+EA
Sbjct: 502 LLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF 561
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ M +GI P + +L+ ++ ++++ +L E+ RGL
Sbjct: 562 AVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGL 607
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 128/244 (52%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
D+ Y +I GLC E++ + + + E + V L+++ KAG+ ++A+ L
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
++ DS+I T+ +IDG CK+G++ A +M L P+V Y L+ LCK+
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
+++A LF+EM + + PD ++ +IDG LK K A +L M+ G+ DL Y
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
+ L+ + G+L EA F +M+ G PD +C S+LK +G D+ EL +++
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 249 RGLL 252
+ ++
Sbjct: 663 KDIV 666
Score = 110 bits (276), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 120/237 (50%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
+ ++ GLC + + LL EM+ N L + T++ + + E +AL L +EM
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
S ++VT+ +LID CK+G + EA+ + M GL ++ VYT+LI G C ++
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
R + LFDE+ +R P Y LI G+ K KEA + M E GV ++ YT L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
GL G +EA L + MI + P+ + ++ K + G + +A+E+ M R
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 116/242 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ ++ D+ Y T+I G C + E + L +EMK +G + + V L+DA+ KAG+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA+ L EM +E +V + LI G C G + F + + G P Y
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI G CK ++ A +F+ M +R + P+ YT LIDG KEAL L N M E
Sbjct: 288 LIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKD 347
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ + Y ++ L + G + +A + M R PD I LL +G++DEA
Sbjct: 348 EEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEAS 407
Query: 241 EL 242
+L
Sbjct: 408 KL 409
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MKG L +G +I C K +++ L EMK GL A+ V+ T+L+ + GE
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+L DE+L+ +T+ LI G CK G ++EA + F M + G+ PNV YT
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LIDGLC + A L + M ++D P+ Y +I+ K +A+ + M +
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMI 212
D Y L+ GL G L EA L + M+
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLML 414
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%)
Query: 35 EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
+M E N V + L++ Y + + A +L ML V +L+ GLC++
Sbjct: 97 KMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNL 156
Query: 95 LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
+A+ M L P+V Y +I G C+ +E+A L +EM +
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216
Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
LID + K EA+ M +G++ DL YTSL+ G CG L + LF E++ R
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
G P I +L++ + G + EA E+ M+ RG+
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV 313
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 37/271 (13%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y T+I G C + +++ + M E G+ N T L+D G+ EAL LL+ M+
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDF--------GL------- 111
+ E VT+ ++I+ LCK GLV +A++ M PD GL
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 112 ----------------HPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
P+V Y ALI GLCK+N + +A +++D + ++ D
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
L++ LK +A+ L ++++ + + + YT+++ G + G L A+ L +M
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEM 246
+ P LL + G++D+A L EM
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEM 555
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%)
Query: 32 LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
+L+ M + G N L+ + E +A+SLL EM + + V ++ +I G C
Sbjct: 129 VLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC 188
Query: 92 KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
+ + +A++ M G ++ + LID CK ++ A EM + D
Sbjct: 189 EGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLV 248
Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
YT+LI G+ L + + E G Y +L+ G + G L+EA +F M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
I RG+ P+ L+ G EA++L N M+
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 1/212 (0%)
Query: 32 LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
L ++ ++ + N+ T ++D + K G + A LL +M S ++ +V + L+ LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540
Query: 92 KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
K G + +A F M P+V + +IDG K I+ A +L M + + PD
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
Y+ LI+ +LK EA++ ++M + G + D + S++ G + L ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Query: 212 IGRGILPD-EILCISLLKKHYERGNMDEAIEL 242
+ + I+ D E+ C + NMD A L
Sbjct: 661 VDKDIVLDKELTCTVMDYMCNSSANMDLAKRL 692
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y ++ LC E + + L EM+ + + V ++D KAG+ A SLL M
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMS 591
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ + + T+ LI+ K G + EAI +F +M D G P+ + +++ + +
Sbjct: 592 RAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETD 651
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
+ L ++ +D++ D ++D Y+ + S ++L R+ V D
Sbjct: 652 KLTELVKKLVDKDIVLDKELTCTVMD-YMCNSS--ANMDLAKRLLRVTDD 698
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 1/155 (0%)
Query: 96 VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTA 155
++ A+ F + D G A L+ L + E A + + +M + D + + +
Sbjct: 54 LKNAVSVFQQAVDSGSSLAFA-GNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSG 112
Query: 156 LIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
L++ Y++ A + M + G ++ + L+ GL R +A L EM
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 216 ILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
++PD ++++ E +++A+EL NEM G G
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG 207
Score = 33.1 bits (74), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ N D+ + +I G + ++ LL M GL+ + + L++ + K G
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGY 614
Query: 61 PSEALSLLDEMLDSRIEV------TVVTFCV 85
EA+S D+M+DS E +V+ +C+
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCI 645
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 126/255 (49%), Gaps = 5/255 (1%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+GK I D+ YG +I G + + + EM E GLT N +I L+ + ++GE
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A LLDEM + VT+C +IDG CKSG + EA F M GL P+ VYT
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DG C+ N +ERA +F K+ T + ALI+ K + + NR+ +
Sbjct: 738 LVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 181 VDL----DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
D + Y ++ L + G+L+ A+ LFH+M ++P I SLL + + G
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 237 DEAIELQNEMMGRGL 251
E + +E + G+
Sbjct: 857 AEMFPVFDEAIAAGI 871
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 133/255 (52%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK + I D+ Y ++I GL + ++++ L EM ENGL N + Y +A E
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ A + EM + + V LI+ CK G V EA + M D G+ + YT
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L++GL K + ++ A +F EM + + PD +Y LI+G+ K + ++A ++ + M E G
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ ++ Y L+ G R G +++A+ L EM +G+ P+ + +++ + + G++ EA
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 241 ELQNEMMGRGLLSGS 255
L +EM +GL+ S
Sbjct: 718 RLFDEMKLKGLVPDS 732
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 124/237 (52%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
+K + YG I G S+F + + EM+E G+ N V+CT L++ Y K G+ EA
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
S M+D I T+ VL++GL K+ V +A + F M G+ P+V Y LI+G
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
K +++A ++FDEM + + P+ Y L+ G+ + ++A L + M+ G+ +
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
Y +++ G + G L EA LF EM +G++PD + +L+ +++ AI +
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 120/251 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK +NI YGT++ G+C + + ++ EM +G N VI TTL+ + +
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A+ +L EM + I + + LI GL K+ + EA + M + GL PN Y A
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
I G + + A EM + ++P+ T LI+ Y K EA + M + G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ D YT L+ GL + + +A +F EM G+GI PD L+ + GNM +A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 241 ELQNEMMGRGL 251
+ +EM+ GL
Sbjct: 648 SIFDEMVEEGL 658
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 126/251 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + ++ +Y T+I S+F D+ +L EMKE G+ + +L+ KA
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA S L EM+++ ++ T+ I G ++ A Y M + G+ PN + T
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+ CKK + A + + M + ++ D YT L++G K++ +A + M G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ D+ +Y L+ G S+ G++Q+A +F EM+ G+ P+ I+ LL G +++A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 241 ELQNEMMGRGL 251
EL +EM +GL
Sbjct: 683 ELLDEMSVKGL 693
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 132/323 (40%), Gaps = 73/323 (22%)
Query: 7 KADLPL---YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K +PL Y +I GLC + ED+K LL EM G++ + + L+D K
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
A L+ EM+ I + + I + K G++ +A F M GL P Y +LI+
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 124 GLCKKNCIERARNLFDEMPKRDMI-----------------------------------P 148
G C++ + + L EM KR+++ P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
+ YT LI +L++ F +A+ + M E G+ D+ Y SL+ GLS+ + EAR
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 209 HEMIGR-----------------------------------GILPDEILCISLLKKHYER 233
EM+ G+LP+++LC L+ ++ ++
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 234 GNMDEAIELQNEMMGRGLLSGSK 256
G + EA M+ +G+L +K
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAK 593
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y ++I G C E LL EMK+ + + T++ +G+ A +++ EM+
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
S VV + LI ++ +A+ M + G+ P++ Y +LI GL K ++
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
AR+ EM + + P+ Y A I GY++ F A M E GV + T L+
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ G + EA + M+ +GIL D L+ ++ +D+A E+ EM G+G+
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK K + D +Y T++ G C + E + + K+ G ++T L++ FK G+
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGK 781
Query: 61 PSEALSLLDEMLDSRIE----VTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
+L+ ++D + VT+ ++ID LCK G + A + F +M + L P V
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
YT+L++G K +FDE + PD Y+ +I+ +LK +AL L ++M
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 177 -----TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK 229
+ G L ++ +L+ G ++ G ++ A + M+ +PD I L+ +
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINE 959
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 21/265 (7%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
D L+G + G + E++ + S L C L+DA + +
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY-FGRMPDF------------------ 109
M++ + V T+ +LI C++G V+ D F +F
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269
Query: 110 --GLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
GL P Y LIDGLCK +E A++L EM + D Y+ LIDG LK +
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
A L + M G+++ Y + +S+ G +++A+ LF MI G++P SL+
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 228 KKHYERGNMDEAIELQNEMMGRGLL 252
+ + N+ + EL EM R ++
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIV 414
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 35/223 (15%)
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
AL L + M+ + T+ VLIDGLCK + +A M G+ + Y+ LID
Sbjct: 261 ALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLID 320
Query: 124 GL-----------------------------------CKKNCIERARNLFDEMPKRDMIP 148
GL K+ +E+A+ LFD M +IP
Sbjct: 321 GLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIP 380
Query: 149 DTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
AY +LI+GY + ++ ++ L M + + + Y ++V G+ G L A +
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIV 440
Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
EMI G P+ ++ +L+K + +A+ + EM +G+
Sbjct: 441 KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 124/251 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ ++ Y +I GLC + K ++ + ++ L + V TL+ K E
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
L ++DEML R + L++GL K G + EA++ R+ DFG+ PN+ VY A
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID LCK A LFD M K + P+ Y+ LID + + AL+ M + G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ L + Y SL+ G + G + A EMI + + P + SL+ + +G +++A+
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 241 ELQNEMMGRGL 251
L +EM G+G+
Sbjct: 493 RLYHEMTGKGI 503
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 122/246 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
+ GK++K D+ Y T+++GLC +FE ++ EM + + ++L++ K G+
Sbjct: 288 LAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EAL+L+ ++D + + + LID LCK EA F RM GL PN Y+
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID C++ ++ A + EM + Y +LI+G+ K A M
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
++ + YTSL+ G G + +A L+HEM G+GI P +LL + G + +A+
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 241 ELQNEM 246
+L NEM
Sbjct: 528 KLFNEM 533
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 110/214 (51%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
+ +L +Y +I LC KF +++LL M + GL N V + L+D + + G+ AL
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
S L EM+D+ ++++V + LI+G CK G + A + M + L P V YT+L+ G
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
C K I +A L+ EM + + P +T L+ G + ++A+ L N M E V +
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
Y ++ G G + +A EM +GI+PD
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 133/261 (50%), Gaps = 8/261 (3%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKL---LLSEMKENGLTANTVICTTLMDAYFK 57
M + + DL YG +I G K +D KL LL EM + GL + VI T+++DA K
Sbjct: 638 MVQRGVDLDLVCYGVLIDG---SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK 694
Query: 58 AGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV 117
G+ EA + D M++ VT+ +I+GLCK+G V EA +M PN
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754
Query: 118 YTALIDGLCKKNC-IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
Y +D L K +++A L + + K ++ +T Y LI G+ + +EA L RM
Sbjct: 755 YGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRM 813
Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
GV D YT+++ L R +++A L++ M +GI PD + +L+ G M
Sbjct: 814 IGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873
Query: 237 DEAIELQNEMMGRGLLSGSKN 257
+A EL+NEM+ +GL+ +K
Sbjct: 874 GKATELRNEMLRQGLIPNNKT 894
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 35/285 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M +K + Y ++I G C ++ ++EM L V T+LM Y G+
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
++AL L EM I ++ TF L+ GL ++GL+R+A+ F M ++ + PN Y
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTA---------------------------- 152
+I+G C++ + +A EM ++ ++PDT +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 153 -------YTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
YT L+ G+ + +EAL++ M + GVDLDL Y L+ G + +
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
L EM RG+ PD+++ S++ + G+ EA + + M+ G
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 130/281 (46%), Gaps = 35/281 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K ++ + Y +++ G C + K + L EM G+ + TTL+ F+AG
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A+ L +EM + ++ VT+ V+I+G C+ G + +A ++ M + G+ P+ Y
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 121 LIDGLC----------------KKNC-------------------IERARNLFDEMPKRD 145
LI GLC K NC +E A ++ EM +R
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
+ D Y LIDG LKH+ K L M + G+ D YTS++ S+ G +EA
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
++ MI G +P+E+ +++ + G ++EA L ++M
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 107/220 (48%)
Query: 32 LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
L ++M G+ + I T ++ + + + S A ++ M + +V +V + VLIDGLC
Sbjct: 214 LFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLC 273
Query: 92 KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
K V EA+ + L P+V Y L+ GLCK E + DEM P
Sbjct: 274 KKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEA 333
Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
A ++L++G K +EALNL R+ + GV +L Y +L+ L + EA +LF M
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
G+ P+++ L+ RG +D A+ EM+ GL
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 120/254 (47%), Gaps = 6/254 (2%)
Query: 5 NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
N+K + Y +I G C E + L EM E G+ +T L+ G+ SEA
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 65 LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
+D + E+ + + L+ G C+ G + EA+ M G+ ++ Y LIDG
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
K + L EM R + PD YT++ID K FKEA + + M G +
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL--C-ISLLKKHYERGNMDEAIE 241
YT+++ GL + G + EA VL +M +P+++ C + +L K +M +A+E
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG--EVDMQKAVE 774
Query: 242 LQNEMMGRGLLSGS 255
L N ++ +GLL+ +
Sbjct: 775 LHNAIL-KGLLANT 787
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%)
Query: 80 VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
V T L+ GL K A++ F M G+ P+V +YT +I LC+ + RA+ +
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251
Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
M + Y LIDG K + EA+ +K + + D+ Y +LV+GL +
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311
Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ + EM+ P E SL++ +RG ++EA+ L ++ G+
Sbjct: 312 EFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV 363
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 125/239 (52%), Gaps = 1/239 (0%)
Query: 2 KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
KGK I+AD+ +Y T+I LC +D+ L +EM G+ + ++L+ G
Sbjct: 233 KGK-IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 62 SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
S+A LL +ML+ +I VVTF LID K G + EA F M + PN+ Y +L
Sbjct: 292 SDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSL 351
Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
I+G C + ++ A+ +F M +D +PD Y LI+G+ K + + + L M+ G+
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ YT+L+ G + A+++F +M+ G+ P+ + +LL + G +++A+
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 112/219 (51%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K I+ D+ Y ++I LC ++ D+ LLS+M E + N V +L+DA+ K G+
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L DEM+ I+ +VT+ LI+G C + EA F M P+V Y
Sbjct: 326 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 385
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G CK + LF +M +R ++ +T YT LI G+ + A + +M G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
V ++ Y +L+ GL + G L++A V+F + + PD
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
+ D + T++ GL +K ++ L+ M G + V +++ K GEP AL+
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL++M +IE VV + +ID LCK V +A++ F M + G+ P+V Y++LI LC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
A L +M +R + P+ + +LID + K EA L + M + +D ++
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y SL+ G L EA+ +F M+ + LPD + +L+ + + + +EL +M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 247 MGRGLLSGS 255
RGL+ +
Sbjct: 407 SRRGLVGNT 415
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 127/238 (53%)
Query: 15 TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
+++ G C ++ ++ L+ +M E G +TV TTL+ F+ + SEA++L++ M+
Sbjct: 140 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 199
Query: 75 RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
+ +VT+ +I+GLCK G A++ +M + +V +Y+ +ID LCK ++ A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
NLF EM + + PD Y++LI + + +A L + M E ++ ++ + SL+
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
++ G L EA LF EMI R I P+ + SL+ +DEA ++ M+ + L
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL 377
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 125/246 (50%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
+ +L Y +I LC S+ + +L +M + G + V +L++ + SEA+
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
+L+D+M++ + VTF L+ GL + EA+ RM G P++ Y A+I+GL
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
CK+ + A NL ++M K + D Y+ +ID K+ +ALNL M G+ D+
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
Y+SL+ L G +A L +M+ R I P+ + SL+ + G + EA +L +E
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 246 MMGRGL 251
M+ R +
Sbjct: 336 MIQRSI 341
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 125/248 (50%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K + DL YG +I GLC + + + LL++M++ + A+ VI +T++D+ K +
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
AL+L EM + I V T+ LI LC G +A M + ++PNV + +LID
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
K+ + A LFDEM +R + P+ Y +LI+G+ H+ EA + M
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
D+ Y +L+ G + + + LF +M RG++ + + +L+ ++ + D A +
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 244 NEMMGRGL 251
+M+ G+
Sbjct: 439 KQMVSDGV 446
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K+ D+ Y T+I G C K D L +M GL NTV TTL+ +F+A +
Sbjct: 371 MVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASD 430
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A + +M+ + ++T+ L+DGLCK+G + +A+ F + + P++ Y
Sbjct: 431 CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+ +G+CK +E +LF + + + PD AY +I G+ K +EA L +M E G
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
D Y +L+ R G + L EM
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 121/255 (47%), Gaps = 15/255 (5%)
Query: 12 LYGTIIWGLCIESKFEDSKLL--LSEMKEN-------------GLTANTVICTTLMDAYF 56
L+G ++ S E SKLL +++MK+ G++ N +++
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLC 111
Query: 57 KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
+ + S AL++L +M+ ++VT L++G C + EA+ +M + G P+
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171
Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
+T L+ GL + N A L + M + PD Y A+I+G K ALNL N+M
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
+ ++ D+ Y++++ L + H+ +A LF EM +GI PD SL+ G
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 237 DEAIELQNEMMGRGL 251
+A L ++M+ R +
Sbjct: 292 SDASRLLSDMLERKI 306
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
K +++ L EM ++ + V + L+ A K + +S ++M + + T+
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
++I+ LC+ + A+ G+M G P++ +L++G C N I A L D+M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
PDT +T L+ G +H EA+ L RM G DL Y +++ GL + G A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L ++M I D ++ +++ + ++D+A+ L EM +G+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 65/158 (41%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + ++ Y T++ GLC K E + ++ ++++ + + + + KAG+
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ L + ++ V+ + +I G CK GL EA F +M + G P+ Y
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID 158
LI + + L EM D + Y + D
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K +K D+ Y T+I G C + E++ L +MKE+G ++ TL+ A+ + G+ +
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGL 90
+ L+ EM R T+ ++ D L
Sbjct: 574 SAELIKEMRSCRFAGDASTYGLVTDML 600
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 123/251 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + D+ Y ++ G+C E + +++ L++M +G N + ++ + G
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A LL +ML +VVTF +LI+ LC+ GL+ AID +MP G PN Y
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+ G CK+ ++RA + M R PD Y ++ K ++A+ + N+++ G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
L Y +++ GL++ G +A L EM + + PD I SL+ G +DEAI
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 241 ELQNEMMGRGL 251
+ +E G+
Sbjct: 505 KFFHEFERMGI 515
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 35/282 (12%)
Query: 5 NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
++ D+ Y TI+ LC K + + +L M + + + T L++A + A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 65 LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN---------- 114
+ LLDEM D VVT+ VL++G+CK G + EAI + MP G PN
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 115 -------------------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
V + LI+ LC+K + RA ++ ++MP+ P+
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPN 378
Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
+ +Y L+ G+ K + A+ RM G D+ Y +++ L + G +++A + +
Sbjct: 379 SLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN 438
Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
++ +G P I +++ + G +AI+L +EM + L
Sbjct: 439 QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 111/236 (47%), Gaps = 3/236 (1%)
Query: 15 TIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDS 74
T+I G C K + +L ++ +G + + ++ Y KAGE + ALS+LD M
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM--- 198
Query: 75 RIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERA 134
+ VVT+ ++ LC SG +++A++ RM +P+V YT LI+ C+ + + A
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 135 RNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWG 194
L DEM R PD Y L++G K EA+ N M G ++ + ++
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 195 LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
+ G +A L +M+ +G P + L+ +G + AI++ +M G
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 116/252 (46%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K + + +I LC + + +L +M ++G N++ L+ + K +
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
A+ L+ M+ +VT+ ++ LCK G V +A++ ++ G P + Y +ID
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
GL K +A L DEM +D+ PDT Y++L+ G + EA+ + +G+
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
+ + S++ GL + A MI RG P+E L++ G EA+EL
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 244 NEMMGRGLLSGS 255
NE+ +GL+ S
Sbjct: 578 NELCNKGLMKKS 589
Score = 97.8 bits (242), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
+ E+ L M +G + + CTTL+ + + G+ +A +L+ + S V+T+
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
V+I G CK+G + A+ RM + P+V Y ++ LC +++A + D M +R
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
D PD YT LI+ + A+ L + M + G D+ Y LV G+ + G L EA
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
++M G P+ I +L+ G +A +L +M+ +G
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
++G D+ Y +I G C + ++ +L M ++ + V T++ + +G+
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGK 219
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A+ +LD ML V+T+ +LI+ C+ V A+ M D G P+V Y
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L++G+CK+ ++ A ++MP P+ + ++ + +A L M G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ + L+ L R G L A + +M G P+ + LL + MD AI
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 241 ELQNEMMGRG 250
E M+ RG
Sbjct: 400 EYLERMVSRG 409
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 3/194 (1%)
Query: 57 KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
+ GE E L+ M+ ++ LI G C+ G R+A + G P+V
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
Y +I G CK I A ++ D M + PD Y ++ K+A+ + +RM
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
+ D+ YT L+ R + A L EM RG PD + L+ + G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 237 DEAIELQNEMMGRG 250
DEAI+ N+M G
Sbjct: 291 DEAIKFLNDMPSSG 304
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 35/187 (18%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + D+ Y T++ LC + K ED+ +L+++ G + + T++D KAG+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAV--- 117
+A+ LLDEM ++ +T+ L+ GL + G V EAI +F G+ PN
Sbjct: 465 TGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 118 --------------------------------YTALIDGLCKKNCIERARNLFDEMPKRD 145
YT LI+GL + + A L +E+ +
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 146 MIPDTTA 152
++ ++A
Sbjct: 585 LMKKSSA 591
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 3/161 (1%)
Query: 90 LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
+ ++G + E + M G P++ T LI G C+ +A + + + +PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
Y +I GY K AL++ +RM+ V D+ Y +++ L G L++A +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
M+ R PD I L++ + A++L +EM RG
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 125/235 (53%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y T+I GLC++ K + + LL M + N V TL++ K ++A+ LL M
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ + + VLI GL K G EA+ + +M + G PN+ VY+ L+DGLC++
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPN 414
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A+ + + M +P+ Y++L+ G+ K +EA+ + M + G + Y+ L+
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
GL G ++EA +++ +M+ GI PD + S++K G+MD A++L +EM+
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 117/234 (50%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y T++ GLC E + +++ LLL EM+ G + + VI L+D K G+ + L+D M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
VT+ LI GLC G + +A+ RM PN Y LI+GL K+
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A L M +R + Y+ LI G K +EA++L +M E G ++ Y+ LV
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
GL R G EA+ + + MI G LP+ SL+K ++ G +EA+++ EM
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEM 458
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 118/252 (46%), Gaps = 2/252 (0%)
Query: 5 NIKADLPLYGTIIWGLCIESKFEDSKL-LLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
NI + + +I LC + +F D + + M E + TLMD K E
Sbjct: 182 NISPNGLSFNLVIKALC-KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
A+ LLDEM + V + VLIDGLCK G + M G PN Y LI
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
GLC K +++A +L + M IP+ Y LI+G +K +A+ L + M E G L
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
+ + Y+ L+ GL + G +EA L+ +M +G P+ ++ L+ G +EA E+
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 244 NEMMGRGLLSGS 255
N M+ G L +
Sbjct: 421 NRMIASGCLPNA 432
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Query: 12 LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
+Y +I GL E K E++ L +M E G N V+ + L+D + G+P+EA +L+ M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 72 LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
+ S T+ L+ G K+GL EA+ + M G N Y+ LIDGLC +
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM---TEVGVDLDLNAY 188
+ A ++ +M + PDT AY+++I G S AL L + M E D+ Y
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGN 235
L+ GL + A L + M+ RG PD I C + L E+ N
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K K ++ +Y ++ GLC E K ++K +L+ M +G N ++LM +FK G
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA+ + EM + + VLIDGLC G V+EA+ + +M G+ P+ Y++
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 121 LIDGLCKKNCIERARNLFDEM-----PKRDMIPDTTAYTALIDGYLKHESFKEALNLKNR 175
+I GLC ++ A L+ EM PK PD Y L+DG + A++L N
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQ--PDVVTYNILLDGLCMQKDISRAVDLLNS 565
Query: 176 MTEVGVDLDLNAYTSLVWGLS-RCGHLQEARVLFHEMIGR 214
M + G D D+ + + LS + + R E++ R
Sbjct: 566 MLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 4/206 (1%)
Query: 49 TTLMDAYFKAGEPSEALSLLDEMLDSRIEVTV----VTFCVLIDGLCKSGLVREAIDYFG 104
++++ G L D +++S + + + ++F ++I LCK V AI+ F
Sbjct: 152 NSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFR 211
Query: 105 RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
MP+ P+ Y L+DGLCK+ I+ A L DEM P Y LIDG K
Sbjct: 212 GMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG 271
Query: 165 SFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCI 224
L + M G + Y +L+ GL G L +A L M+ +P+++
Sbjct: 272 DLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYG 331
Query: 225 SLLKKHYERGNMDEAIELQNEMMGRG 250
+L+ ++ +A+ L + M RG
Sbjct: 332 TLINGLVKQRRATDAVRLLSSMEERG 357
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 118/227 (51%), Gaps = 1/227 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I+ + +Y TII LC D+ L +EM G+ N V +L+ G
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A LL +M++ +I VVTF LID K G + EA + M + P++ Y++
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G C + ++ A+++F+ M +D P+ Y LI G+ K + E + L M++ G
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
+ + YT+L+ G + A+++F +M+ G+LPD I+ S+L
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD-IMTYSIL 472
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 125/249 (50%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
+ D + T+I GL ++ ++ L+ M G + V +++ K G+ ALS
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL +M +IE VV + +ID LC V +A++ F M + G+ PNV Y +LI LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
A L +M +R + P+ ++ALID ++K EA L + M + +D D+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y+SL+ G L EA+ +F MI + P+ + +L+K + +DE +EL EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 247 MGRGLLSGS 255
RGL+ +
Sbjct: 423 SQRGLVGNT 431
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K I+ ++ Y ++I LC ++ D+ LLS+M E + N V + L+DA+ K G+
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L DEM+ I+ + T+ LI+G C + EA F M PNV Y
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI G CK ++ LF EM +R ++ +T YT LI G+ + A + +M G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
V D+ Y+ L+ GL G ++ A V+F + + PD
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 124/249 (49%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K + DL YG ++ GLC + + LL +M++ + VI T++DA ++
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
AL+L EM + I VVT+ LI LC G +A M + ++PNV ++ALID
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
K+ + A L+DEM KR + PD Y++LI+G+ H+ EA ++ M
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
++ Y +L+ G + + E LF EM RG++ + + +L+ ++ D A +
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 244 NEMMGRGLL 252
+M+ G+L
Sbjct: 455 KQMVSDGVL 463
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 117/246 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M ++I D+ Y ++I G C+ + +++K + M N V TL+ + KA
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
E + L EM + VT+ LI G ++ A F +M G+ P++ Y+
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DGLC +E A +F+ + + M PD Y +I+G K ++ +L ++ G
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V ++ YT+++ G R G +EA LF EM G LPD +L++ H G+ +
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 241 ELQNEM 246
EL EM
Sbjct: 592 ELIREM 597
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 123/251 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I +L Y +I C S+ + +L++M + G + V +L++ +
Sbjct: 107 MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNR 166
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A+SL+ +M++ + TF LI GL + EA+ RM G P++ Y
Sbjct: 167 ISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGI 226
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+++GLCK+ I+ A +L +M + + P Y +ID +++ +ALNL M G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ ++ Y SL+ L G +A L +MI R I P+ + +L+ + G + EA
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 241 ELQNEMMGRGL 251
+L +EM+ R +
Sbjct: 347 KLYDEMIKRSI 357
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
+ ++ + +KF+ L +M+ G++ N + L++ + + + S AL++L +M+
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
E +VT L++G C + +A+ G+M + G P+ + LI GL + N
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A L D M + PD Y +++G K AL+L +M + ++ + Y +++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L ++ +A LF EM +GI P+ + SL++ G +A L ++M+ R +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Score = 84.3 bits (207), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
K +D+ L +M ++ + V + L+ A K + +SL ++M + I + T+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
+LI+ C+ + A+ +M G P++ +L++G C N I A +L +M +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
PD+ + LI G +H EA+ L +RM G DL Y +V GL + G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L +M I P ++ +++ N+++A+ L EM +G+
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K +K ++ Y T++ G C + E++ L EMKE G ++ TL+ A+ + G+ +
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAA 589
Query: 64 ALSLLDEMLDSRI 76
+ L+ EM R
Sbjct: 590 SAELIREMRSCRF 602
>sp|Q9LER0|PP381_ARATH Pentatricopeptide repeat-containing protein At5g14770,
mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2
SV=2
Length = 940
Score = 124 bits (310), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/243 (32%), Positives = 132/243 (54%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
D+ + +II LC K + LLL EM+E + N V TTL+D+ FKA AL+L
Sbjct: 260 DVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALY 319
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
+M+ I V +V + VL+DGL K+G +REA F + + PNV YTAL+DGLCK
Sbjct: 320 SQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA 379
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
+ A + +M ++ +IP+ Y+++I+GY+K +EA++L +M + V + Y
Sbjct: 380 GDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTY 439
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
+++ GL + G + A L EM G+ + + +L+ G + E L +M+
Sbjct: 440 GTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVS 499
Query: 249 RGL 251
+G+
Sbjct: 500 KGV 502
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 126/239 (52%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y T++ L + + + L S+M G+ + V+ T LMD FKAG+ EA +L
Sbjct: 299 YTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 358
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ VVT+ L+DGLCK+G + A +M + + PNV Y+++I+G KK +E
Sbjct: 359 EDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLE 418
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A +L +M ++++P+ Y +IDG K + A+ L M +GV+ + +LV
Sbjct: 419 EAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALV 478
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L R G ++E + L +M+ +G+ D+I SL+ ++ G+ + A+ EM RG+
Sbjct: 479 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGM 537
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 126/252 (50%), Gaps = 7/252 (2%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
++ + I D Y T+I GLC +++ LSEM + G+ +TV TL+D + K G
Sbjct: 154 LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGN 213
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A +L+DE+ E+ ++T +L+ + EA + M G P+V +++
Sbjct: 214 FVRAKALVDEI----SELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSS 266
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I+ LCK + L EM + + P+ YT L+D K ++ AL L ++M G
Sbjct: 267 IINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRG 326
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ +DL YT L+ GL + G L+EA F ++ +P+ + +L+ + G++ A
Sbjct: 327 IPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE 386
Query: 241 ELQNEMMGRGLL 252
+ +M+ + ++
Sbjct: 387 FIITQMLEKSVI 398
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 119/252 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K I+ D+ + ++ + E L +MK G+ + + C ++ + G+
Sbjct: 566 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 625
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA+ +L++M+ I + T+ + +D K + +G+ + VY
Sbjct: 626 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 685
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI LCK ++A + +M R IPDT + +L+ GY ++AL+ + M E G
Sbjct: 686 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 745
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ ++ Y +++ GLS G ++E EM RG+ PD+ +L+ + GNM ++
Sbjct: 746 ISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSM 805
Query: 241 ELQNEMMGRGLL 252
+ EM+ GL+
Sbjct: 806 TIYCEMIADGLV 817
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 28/269 (10%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKE--------------------------- 38
I D Y T+I G C F +K L+ E+ E
Sbjct: 194 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMV 253
Query: 39 -NGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVR 97
+G + V +++++ K G+ E LL EM + + VT+ L+D L K+ + R
Sbjct: 254 MSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYR 313
Query: 98 EAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALI 157
A+ + +M G+ ++ VYT L+DGL K + A F + + + +P+ YTAL+
Sbjct: 314 HALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALV 373
Query: 158 DGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGIL 217
DG K A + +M E V ++ Y+S++ G + G L+EA L +M + ++
Sbjct: 374 DGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVV 433
Query: 218 PDEILCISLLKKHYERGNMDEAIELQNEM 246
P+ +++ ++ G + AIEL EM
Sbjct: 434 PNGFTYGTVIDGLFKAGKEEMAIELSKEM 462
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 117/247 (47%), Gaps = 11/247 (4%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
+ D L+ ++I + D L+ S+M G++ + L+ ++ K G S A
Sbjct: 91 VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 150
Query: 65 LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
+SLL + I + VT+ +I GLC+ GL EA + M G+ P+ Y LIDG
Sbjct: 151 ISLLRNRV---ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDG 207
Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
CK RA+ L DE+ + ++I +T L+ Y + +EA M G D D
Sbjct: 208 FCKVGNFVRAKALVDEISELNLI----THTILLSSYYNLHAIEEAY---RDMVMSGFDPD 260
Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQN 244
+ ++S++ L + G + E +L EM + P+ + +L+ ++ A+ L +
Sbjct: 261 VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 320
Query: 245 EMMGRGL 251
+M+ RG+
Sbjct: 321 QMVVRGI 327
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 13/226 (5%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
IK +Y T+I LC + + +++ +M+ G +TV +LM YF +AL
Sbjct: 676 IKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKAL 735
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
S M+++ I V T+ +I GL +GL++E + M G+ P+ Y ALI G
Sbjct: 736 STYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQ 795
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
K ++ + ++ EM ++P T+ Y LI + +A L M + GV +
Sbjct: 796 AKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNT 855
Query: 186 NAYTSLVWGLSR-CGH-----------LQEARVLFHEMI-GRGILP 218
+ Y +++ GL + C H L EA+ L EM+ +G +P
Sbjct: 856 STYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 901
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 1/239 (0%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y ++ GLC ++ ++++M E + N V +++++ Y K G EA+SLL +M
Sbjct: 369 YTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 428
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
D + T+ +IDGL K+G AI+ M G+ N + AL++ L + I+
Sbjct: 429 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 488
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
+ L +M + + D YT+LID + K + AL M E G+ D+ +Y L+
Sbjct: 489 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 548
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
G+ + G + A + M +GI PD ++ ++G+ + ++L ++M G+
Sbjct: 549 SGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI 606
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 4/194 (2%)
Query: 26 FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
F+ + LLS G+ + + TL+ K G +A ++ +M VTF
Sbjct: 665 FKTHETLLSY----GIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNS 720
Query: 86 LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
L+ G VR+A+ + M + G+ PNVA Y +I GL I+ EM R
Sbjct: 721 LMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 780
Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
M PD Y ALI G K + K ++ + M G+ + Y L+ + G + +AR
Sbjct: 781 MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 840
Query: 206 VLFHEMIGRGILPD 219
L EM RG+ P+
Sbjct: 841 ELLKEMGKRGVSPN 854
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 108/251 (43%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK IK L ++ LC K E++ +L++M + N +D K
Sbjct: 601 MKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR 660
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ +L I+++ + LI LCK G+ ++A G M G P+ + +
Sbjct: 661 ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNS 720
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+ G + + +A + + M + + P+ Y +I G KE + M G
Sbjct: 721 LMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 780
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ D Y +L+ G ++ G+++ + ++ EMI G++P L+ + G M +A
Sbjct: 781 MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 840
Query: 241 ELQNEMMGRGL 251
EL EM RG+
Sbjct: 841 ELLKEMGKRGV 851
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 1/244 (0%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K++ ++ Y ++I G + E++ LL +M++ + N T++D FKAG+
Sbjct: 395 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 454
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
A+ L EM +E L++ L + G ++E M G+ + YT+LID
Sbjct: 455 AIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID 514
Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
K E A +EM +R M D +Y LI G LK K M E G++
Sbjct: 515 VFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKG-MREKGIEP 573
Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
D+ + ++ + G + L+ +M GI P + C ++ E G M+EAI +
Sbjct: 574 DIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHIL 633
Query: 244 NEMM 247
N+MM
Sbjct: 634 NQMM 637
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 6/143 (4%)
Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCI-ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHE 164
M FG+ P+ ++ +LI + ++ ++ +M + PD A LI + K
Sbjct: 86 MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVG 145
Query: 165 SFKEALNL-KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILC 223
A++L +NR+ + +D Y +++ GL G EA EM+ GILPD +
Sbjct: 146 RLSFAISLLRNRV----ISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY 201
Query: 224 ISLLKKHYERGNMDEAIELQNEM 246
+L+ + GN A L +E+
Sbjct: 202 NTLIDGFCKVGNFVRAKALVDEI 224
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 125/273 (45%), Gaps = 31/273 (11%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M GK + D+ YGTI+ G+C + + LLS+M+E + + VI + ++D K G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A L EML+ I V T+ +IDG C G +A M + ++P+V + A
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEA----------- 169
LI K+ + A L DEM R + PDT Y ++I G+ KH F +A
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD 431
Query: 170 --------------------LNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
+ L ++ G+ + Y +L+ G +L A+ LF
Sbjct: 432 VVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQ 491
Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
EMI G+ PD I C LL E ++EA+EL
Sbjct: 492 EMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 125/249 (50%), Gaps = 15/249 (6%)
Query: 6 IKADLPLYGTIIWGLCIESK---------------FEDSKLLLSEMKENGLTANTVICTT 50
+ D+ + T++ GLC+E + F ++ L +M E GLT + T
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 51 LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
L++ G EA +L+++M+ + + VVT+ +++G+CK G + A++ +M +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
+ P+V +Y+A+ID LCK A+ LF EM ++ + P+ Y +IDG+ + +A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
L M E ++ D+ + +L+ + G L EA L EM+ R I PD + S++
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 231 YERGNMDEA 239
+ D+A
Sbjct: 412 CKHNRFDDA 420
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 120/253 (47%), Gaps = 8/253 (3%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + I D Y ++I+G C ++F+D+K + M + + V T++D Y +A
Sbjct: 392 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 447
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
E + LL E+ + T+ LI G C+ + A D F M G+ P+
Sbjct: 448 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 507
Query: 121 LIDGLCKKNCIERARNLFD--EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTE 178
L+ G C+ +E A LF+ +M K D+ DT AY +I G K EA +L +
Sbjct: 508 LLYGFCENEKLEEALELFEVIQMSKIDL--DTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 179 VGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDE 238
GV+ D+ Y ++ G + +A VLFH+M G PD +L++ + G +D+
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 239 AIELQNEMMGRGL 251
+IEL +EM G
Sbjct: 626 SIELISEMRSNGF 638
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 15/267 (5%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + I ++ + +I C K S ++ + G + V TL+
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 61 PSEALSL---------------LDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
SEAL+L D+M++ + V+TF LI+GLC G V EA +
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
M GLH +V Y +++G+CK + A NL +M + + PD Y+A+ID K
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 166 FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCIS 225
+A L + M E G+ ++ Y ++ G G +A+ L +MI R I PD + +
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 226 LLKKHYERGNMDEAIELQNEMMGRGLL 252
L+ + G + EA +L +EM+ R +
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIF 398
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
+ + A+ Y T+I G C ++ L EM +G+ +T+ C L+ + + + E
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
AL L + + S+I++ V + ++I G+CK V EA D F +P G+ P+V Y +I
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
G C K+ I A LF +M PD + Y LI G LK +++ L + M G
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 184 D 184
D
Sbjct: 641 D 641
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 1/232 (0%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
D+ + TII C + ++ LL E+ GL ANT TL+ + + + A L
Sbjct: 431 DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF 490
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
EM+ + +T +L+ G C++ + EA++ F + + + Y +I G+CK
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
+ ++ A +LF +P + PD Y +I G+ + +A L ++M + G + D + Y
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+L+ G + G + ++ L EM G D I ++ G +D++
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGFSGDA-FTIKMVADLITDGRLDKSF 661
Score = 84.7 bits (208), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 15/221 (6%)
Query: 46 VICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGR 105
V C ++ + + P A+SL +M RI + + +F +LI C + ++ FG+
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGK 166
Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIE---------------RARNLFDEMPKRDMIPDT 150
+ G P+V + L+ GLC ++ I A LFD+M + + P
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 151 TAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHE 210
+ LI+G EA L N+M G+ +D+ Y ++V G+ + G + A L +
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 211 MIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
M I PD ++ +++ + + G+ +A L +EM+ +G+
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 55 YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN 114
YFK+ + +A+ D M+ SR T V +I + AI + +M + N
Sbjct: 83 YFKSLD--DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLN 140
Query: 115 VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALID---------------G 159
+ + LI C + + + + F ++ K PD + L+ G
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 160 YLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
Y+ F EA+ L ++M E+G+ + + +L+ GL G + EA L ++M+G+G+ D
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 220 EILCISLLKKHYERGNMDEAIELQNEM 246
+ +++ + G+ A+ L ++M
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKM 287
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 124/250 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK K + AD+ Y +I LC ++ LLL +M++ + N V TL++ + G+
Sbjct: 254 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 313
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A LL+EML + VTF LIDG G +EA+ F M GL P+ Y
Sbjct: 314 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 373
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DGLCK + AR + M + + YT +IDG K+ EA+ L N M++ G
Sbjct: 374 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 433
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+D D+ Y++L+ G + G + A+ + + G+ P+ I+ +L+ G + EAI
Sbjct: 434 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 493
Query: 241 ELQNEMMGRG 250
+ M+ G
Sbjct: 494 RIYEAMILEG 503
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 124/255 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + I + Y T+I G E K + LL+EM GL+ N V L+D + G
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EAL + M + + V++ VL+DGLCK+ A ++ RM G+ YT
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+IDGLCK ++ A L +EM K + PD Y+ALI+G+ K FK A + R+ VG
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ + Y++L++ R G L+EA ++ MI G D L+ + G + EA
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 241 ELQNEMMGRGLLSGS 255
E M G+L +
Sbjct: 529 EFMRCMTSDGILPNT 543
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 35/290 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K + YG ++ GLC ++F+ ++ MK NG+ + T ++D K G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA+ LL+EM I+ +VT+ LI+G CK G + A + R+ GL PN +Y+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 121 LIDGLCKKNCIERARNLFDEM----PKRD------------------------------- 145
LI C+ C++ A +++ M RD
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
++P+T ++ LI+GY +A ++ + MT+VG Y SL+ GL + GHL+EA
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
+ D ++ +LL + GN+ +A+ L EM+ R +L S
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 116/251 (46%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + I D+ + +I LC E FE S L+ +M+++G V T++ Y K G
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A+ LLD M ++ V T+ +LI LC+S + + M +HPN Y
Sbjct: 244 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 303
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G + + A L +EM + P+ + ALIDG++ +FKEAL + M G
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ +Y L+ GL + AR + M G+ I ++ + G +DEA+
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 241 ELQNEMMGRGL 251
L NEM G+
Sbjct: 424 VLLNEMSKDGI 434
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 1/235 (0%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
+ ++ LC K +++ + M +G+ NTV L++ Y +GE +A S+ DEM
Sbjct: 511 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 570
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
T T+ L+ GLCK G +REA + + + +Y L+ +CK +
Sbjct: 571 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 630
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYL-KHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
+A +LF EM +R ++PD+ YT+LI G K ++ L K V + YT
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 690
Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
V G+ + G + +M G PD + +++ + G +++ +L EM
Sbjct: 691 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
+ +I G E F+++ + M+ GLT + V L+D K E A M
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ + V +T+ +IDGLCK+G + EA+ M G+ P++ Y+ALI+G CK +
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A+ + + + + P+ Y+ LI + KEA+ + M G D + LV
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
L + G + EA M GILP+ + L+ + G +A + +EM G
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Score = 90.9 bits (224), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 98/229 (42%)
Query: 23 ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
E +DS + M G + C ++ + K+GE S L EML +I V T
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 195
Query: 83 FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
F +LI+ LC G ++ +M G P + Y ++ CKK + A L D M
Sbjct: 196 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMK 255
Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
+ + D Y LI + + L M + + + Y +L+ G S G +
Sbjct: 256 SKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL 315
Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
A L +EM+ G+ P+ + +L+ H GN EA+++ M +GL
Sbjct: 316 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 364
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 111/275 (40%), Gaps = 36/275 (13%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
YG+++ GLC +++ L + +TV+ TL+ A K+G ++A+SL EM+
Sbjct: 581 YGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 640
Query: 73 DSRIEVTVVTFCVLIDGLCKSG-------LVREA-------------------------- 99
I T+ LI GLC+ G +EA
Sbjct: 641 QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 700
Query: 100 ---IDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
I + +M + G P++ A+IDG + IE+ +L EM ++ P+ T Y L
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
+ GY K + + L + G+ D SLV G+ L+ + I RG+
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGV 820
Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
D L+ K G ++ A +L M G+
Sbjct: 821 EVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M +N +L Y ++ G S LL + NG+ + + C +L+ ++
Sbjct: 745 MGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNM 804
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
L +L + +EV TF +LI C +G + A D M G+ + A
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
++ L + + + +R + EM K+ + P++ Y LI+G + K A +K M
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 924
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ A +++V L++CG EA +L M+ ++P +L+ + GN+ EA+
Sbjct: 925 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEAL 984
Query: 241 ELQNEMMGRGL 251
EL+ M GL
Sbjct: 985 ELRVVMSNCGL 995
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 115/285 (40%), Gaps = 36/285 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENG-LTANTVICTTLMDAYFKAG 59
M ++I D Y ++I GLC + K + L E + G + N V+ T +D FKAG
Sbjct: 639 MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698
Query: 60 EPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
+ + ++M + +VT +IDG + G + + D M + PN+ Y
Sbjct: 699 QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 758
Query: 120 -----------------------------------ALIDGLCKKNCIERARNLFDEMPKR 144
+L+ G+C+ N +E + R
Sbjct: 759 ILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICR 818
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
+ D + LI + A +L MT +G+ LD + ++V L+R QE+
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGR 249
R++ HEM +GI P+ I L+ G++ A ++ EM+
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH 923
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + I + Y +I GLC + + ++ EM + + V + ++ A K G+
Sbjct: 885 MSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGK 944
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA LL ML ++ T+ +F L+ CK+G V EA++ M + GL ++ Y
Sbjct: 945 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1004
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
LI GLC K + A L++EM + + T Y ALI G L E+
Sbjct: 1005 LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARET 1049
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 108/251 (43%), Gaps = 1/251 (0%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
+ ++ D + +I C + + L+ M G++ + C ++ + E
Sbjct: 818 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 877
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
+ +L EM I + LI+GLC+ G ++ A M + P +A++
Sbjct: 878 SRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVR 937
Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
L K + A L M K ++P ++T L+ K+ + EAL L+ M+ G+ L
Sbjct: 938 ALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKL 997
Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE-L 242
DL +Y L+ GL G + A L+ EM G G L + +L++ R + +
Sbjct: 998 DLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADII 1057
Query: 243 QNEMMGRGLLS 253
+++ RG ++
Sbjct: 1058 LKDLLARGFIT 1068
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
D+ +I G K E + LL EM N L+ Y K + S + L
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
++ + I +T L+ G+C+S ++ + G+ + + LI C
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
I A +L M + D A++ ++ F+E+ + + M++ G+ + Y
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
L+ GL R G ++ A V+ EMI I P + ++++ + G DEA L M+
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFML 956
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 127/244 (52%)
Query: 3 GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
+ K D+ Y +I LC E K E + L E + GL N + L+ AY K+ E
Sbjct: 338 ANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYD 397
Query: 63 EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
A LL +M + + +VT+ +LI GL SG + +A++ ++ D G+ P+ A+Y L+
Sbjct: 398 IASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLM 457
Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
GLCK A+ LF EM R+++PD Y LIDG+++ F EA + + E GV
Sbjct: 458 SGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVK 517
Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
+D+ + +++ G R G L EA + M ++PD+ +++ + ++ +M AI++
Sbjct: 518 VDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKI 577
Query: 243 QNEM 246
M
Sbjct: 578 FRYM 581
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 122/251 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
+K K L +GT+I G C E F S LLSE+KE GL + ++DA ++ G
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY 325
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ + ++ + + V T+ +LI+ LCK G A+ + GL PN Y
Sbjct: 326 KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI CK + A L +M +R PD Y LI G + +A+N+K ++ + G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V D Y L+ GL + G A++LF EM+ R ILPD + +L+ G+ DEA
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 241 ELQNEMMGRGL 251
++ + + +G+
Sbjct: 506 KVFSLSVEKGV 516
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 1/248 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + K D+ YG +I GL + +D+ + ++ + G++ + I LM K G
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A L EMLD I + LIDG +SG EA F + G+ +V + A
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I G C+ ++ A + M + ++PD Y+ +IDGY+K + A+ + M +
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKK-HYERGNMDEA 239
++ YTSL+ G G + A F EM R ++P+ + +L++ E +++A
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Query: 240 IELQNEMM 247
+ MM
Sbjct: 646 VYYWELMM 653
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 117/250 (46%)
Query: 3 GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
GK ++ Y TII G C E++ L+ E+K G T+++ + K G+
Sbjct: 233 GKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV 292
Query: 63 EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
+ LL E+ + + V+V +ID + G + + G + P+VA Y LI
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI 352
Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
+ LCK+ E A DE K+ +IP+ +Y LI Y K + + A L +M E G
Sbjct: 353 NRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412
Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
D+ Y L+ GL GH+ +A + ++I RG+ PD + L+ + G A L
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 243 QNEMMGRGLL 252
+EM+ R +L
Sbjct: 473 FSEMLDRNIL 482
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 107/240 (44%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y +I C +++ + LL +M E G + V L+ +G +A+++ +++
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLI 442
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
D + + +L+ GLCK+G A F M D + P+ VY LIDG + +
Sbjct: 443 DRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFD 502
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
AR +F ++ + D + A+I G+ + EAL NRM E + D Y++++
Sbjct: 503 EARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
G + + A +F M P+ + SL+ +G+ A E EM R L+
Sbjct: 563 DGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLV 622
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 120/320 (37%), Gaps = 91/320 (28%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
+ + D +Y ++ GLC +F +KLL SEM + + + + TL+D + ++G+ E
Sbjct: 444 RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDE 503
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRM------PDFGLH----- 112
A + ++ ++V VV +I G C+SG++ EA+ RM PD +
Sbjct: 504 ARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 113 ------------------------PNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIP 148
PNV YT+LI+G C + + A F EM RD++P
Sbjct: 564 GYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVP 623
Query: 149 DTTAYTALI------------------------------------DGYLKHES------- 165
+ YT LI G++K S
Sbjct: 624 NVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEP 683
Query: 166 ----------FKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
F E + RM G AY S + L G ++ A + +M+ +G
Sbjct: 684 DGSNHGQSSLFSEFFH---RMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG 740
Query: 216 ILPDEILCISLLKKHYERGN 235
PD + ++L GN
Sbjct: 741 FSPDPVSFAAILHGFCVVGN 760
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 6/212 (2%)
Query: 44 NTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLV---REAI 100
+ + C +L+ K+ +A + DEM D V + C+L+ G+C G V R+ I
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLI 228
Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
+ GR G PN+ Y +I G CK IE A +F E+ + +P + +I+G+
Sbjct: 229 E--GRWGK-GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGF 285
Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
K F + L + + E G+ + + +++ R G+ + +I PD
Sbjct: 286 CKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDV 345
Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
L+ + + G + A+ +E +GL+
Sbjct: 346 ATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K ++ Y ++I G C + F+ ++ EM+ L N V TTL+ + K
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESS 640
Query: 61 PSE-ALSLLDEMLDSRIEVTVVTFCVLIDGLCK--SGLVREAID------------YFGR 105
E A+ + M+ ++ VTF L+ G K SG V D +F R
Sbjct: 641 TLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHR 700
Query: 106 MPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHES 165
M G + A Y + + LC ++ A D+M K+ PD ++ A++ G+ +
Sbjct: 701 MKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760
Query: 166 FKEALNLKN-RMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
K+ N+ + E G+++ + L L + + EA + H M+ +
Sbjct: 761 SKQWRNMDFCNLGEKGLEVAVRYSQVLEQHLPQ-PVICEASTILHAMVEKA 810
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 95/259 (36%), Gaps = 35/259 (13%)
Query: 28 DSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLI 87
D++ + EM + G + + L+ G+ L++ +V + +I
Sbjct: 188 DARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTII 247
Query: 88 DGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR--- 144
G CK G + A F + G P + + +I+G CK+ + L E+ +R
Sbjct: 248 GGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLR 307
Query: 145 --------------------------------DMIPDTTAYTALIDGYLKHESFKEALNL 172
D PD Y LI+ K + A+
Sbjct: 308 VSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGF 367
Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
+ ++ G+ + +Y L+ + A L +M RG PD + L+
Sbjct: 368 LDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVV 427
Query: 233 RGNMDEAIELQNEMMGRGL 251
G+MD+A+ ++ +++ RG+
Sbjct: 428 SGHMDDAVNMKVKLIDRGV 446
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 96/220 (43%), Gaps = 1/220 (0%)
Query: 33 LSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCK 92
LS K++ +N C++ + + +E +L + + +++T ++ +
Sbjct: 87 LSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAE 146
Query: 93 SGLVREAIDYFGRMPD-FGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
SG + +A++ + + + + P+V +L+ L K + AR ++DEM R D
Sbjct: 147 SGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNY 206
Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
+ L+ G + L G ++ Y +++ G + G ++ A ++F E+
Sbjct: 207 STCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKEL 266
Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+G +P +++ + G+ + L +E+ RGL
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL 306
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 115/217 (52%)
Query: 35 EMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSG 94
E+ + G N + LM+ + K G S+A + DE+ ++ TVV+F LI+G CK G
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 95 LVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYT 154
+ E +M P+V Y+ALI+ LCK+N ++ A LFDEM KR +IP+ +T
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 155 ALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGR 214
LI G+ ++ +M G+ D+ Y +LV G + G L AR + MI R
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 215 GILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
G+ PD+I +L+ G+++ A+E++ EM G+
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 35/274 (12%)
Query: 12 LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
++ ++ C E D++ + E+ + L V TL++ Y K G E L +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 72 LDSRIEVTVVTFCVLIDGLCKS----------------GLVREAIDY------------- 102
SR V T+ LI+ LCK GL+ + +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 103 ------FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTAL 156
+ +M GL P++ +Y L++G CK + ARN+ D M +R + PD YT L
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 157 IDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGI 216
IDG+ + + AL ++ M + G++LD +++LV G+ + G + +A EM+ GI
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 217 LPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
PD++ ++ ++G+ +L EM G
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 35/270 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + D+ Y +I LC E+K + + L EM + GL N VI TTL+ + + GE
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ML ++ +V + L++G CK+G + A + M GL P+ YT
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 121 LIDGLCKKNCIERARNLFDEMPK------------------------------RDMI--- 147
LIDG C+ +E A + EM + R+M+
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 148 --PDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
PD YT ++D + K + L M G + Y L+ GL + G ++ A
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGN 235
+L M+ G++PD+I +LL+ H+ N
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 4/211 (1%)
Query: 45 TVICTTLMDA----YFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAI 100
T +C L+DA Y G +A+ R +V + L+D + K
Sbjct: 166 TPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIW 225
Query: 101 DYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGY 160
++ + D G NV V+ L++ CK+ I A+ +FDE+ KR + P ++ LI+GY
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGY 285
Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
K + E LK++M + D+ Y++L+ L + + A LF EM RG++P++
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
Query: 221 ILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
++ +L+ H G +D E +M+ +GL
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGL 376
Score = 87.4 bits (215), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%)
Query: 48 CTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMP 107
C L+D K E+LD+ + V F +L++ CK G + +A F +
Sbjct: 208 CGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEIT 267
Query: 108 DFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
L P V + LI+G CK ++ L +M K PD Y+ALI+ K
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327
Query: 168 EALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
A L + M + G+ + +T+L+ G SR G + + + +M+ +G+ PD +L +L+
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387
Query: 228 KKHYERGNMDEAIELQNEMMGRGL 251
+ G++ A + + M+ RGL
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRGL 411
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 3/205 (1%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + ++ D Y T+I G C E + + EM +NG+ + V + L+ K G
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A L EML + I+ VT+ +++D CK G + M G P+V Y
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L++GLCK ++ A L D M ++PD Y L++G+ +H + + K E+G
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQK---PEIG 582
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEAR 205
+ DL +Y S+V L R R
Sbjct: 583 IVADLASYKSIVNELDRASKDHRNR 607
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 125/243 (51%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
+ T+I GL + +K ++ L+ M G + V +++ K G+ A +LL++M
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
++E V+ + +IDGLCK + +A++ F M G+ PNV Y++LI LC
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A L +M +R + PD ++ALID ++K EA L + M + +D + Y+SL+
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
G L EA+ +F M+ + PD + +L+K + ++E +E+ EM RGL+
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 253 SGS 255
+
Sbjct: 429 GNT 431
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 124/240 (51%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ ++ + +Y TII GLC +D+ L EM+ G+ N V ++L+ G
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A LL +M++ +I V TF LID K G + EA + M + P++ Y++
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G C + ++ A+ +F+ M + PD Y LI G+ K++ +E + + M++ G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ + Y L+ GL + G A+ +F EM+ G+ P+ + +LL + G +++A+
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 125/251 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K + DL YG ++ GLC + + LL++M++ L +I T++D K
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+AL+L EM I VVT+ LI LC G +A M + ++P+V ++A
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID K+ + A L+DEM KR + P Y++LI+G+ H+ EA + M
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
D+ Y +L+ G + ++E +F EM RG++ + + L++ ++ G+ D A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 451
Query: 241 ELQNEMMGRGL 251
E+ EM+ G+
Sbjct: 452 EIFKEMVSDGV 462
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 120/239 (50%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y +I C S+ + +L +M + G N V ++L++ Y + SEA++L+D+M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
+ + VTF LI GL EA+ RM G P++ Y +++GLCK+ +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A NL ++M + + P Y +IDG K++ +ALNL M G+ ++ Y+SL+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L G +A L +MI R I PD +L+ + G + EA +L +EM+ R +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K I+ ++ Y ++I LC ++ D+ LLS+M E + + + L+DA+ K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L DEM+ I+ ++VT+ LI+G C + EA F M P+V Y
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI G CK +E +F EM +R ++ +T Y LI G + A + M G
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
V ++ Y +L+ GL + G L++A V+F
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 119/251 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M ++I + Y ++I G C+ + +++K + M + V TL+ + K
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
E + + EM + VT+ +LI GL ++G A + F M G+ PN+ Y
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+DGLCK +E+A +F+ + + M P Y +I+G K ++ +L ++ G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V D+ AY +++ G R G +EA LF EM G LP+ +L++ G+ + +
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591
Query: 241 ELQNEMMGRGL 251
EL EM G
Sbjct: 592 ELIKEMRSCGF 602
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 1/240 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K+ D+ Y T+I G C + E+ + EM + GL NTV L+ F+AG+
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A + EM+ + ++T+ L+DGLCK+G + +A+ F + + P + Y
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I+G+CK +E +LF + + + PD AY +I G+ + S +EA L M E G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ Y +L+ R G + + L EM G D I L+ G +D++
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS-TIGLVTNMLHDGRLDKSF 625
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
+ ++ + +KF+ L +M+ G+ N + L++ + + + AL++L +M+
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
E +VT L++G C S + EA+ +M G PN + LI GL N
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A L D M + PD Y +++G K A NL N+M + ++ + Y +++
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
GL + H+ +A LF EM +GI P+ + SL+ G +A L ++M+ R +
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%)
Query: 23 ESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVT 82
E K +D+ L EM ++ + + + L+ A K + +SL ++M + I T
Sbjct: 59 ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYT 118
Query: 83 FCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMP 142
+ +LI+ C+ + A+ G+M G PN+ ++L++G C I A L D+M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 143 KRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQ 202
P+T + LI G H EA+ L +RM G DL Y +V GL + G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 203 EARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
A L ++M + P ++ +++ + +MD+A+ L EM +G+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 123/249 (49%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
K D + T+I GL + +K ++ L+ +M + G + V T+++ K G+ AL+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL++M +RI+ VV F +ID LCK V A+D F M G+ PNV Y +LI+ LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
A L M ++ + P+ + ALID + K EA L M + +D D
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y L+ G L EA+ +F M+ + LP+ +L+ + +++ +EL EM
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 247 MGRGLLSGS 255
RGL+ +
Sbjct: 425 SQRGLVGNT 433
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 123/248 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + DL YGT++ GLC + + LL++M+ + AN VI T++D+ K
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A+ L EM I VVT+ LI+ LC G +A M + ++PNV + A
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID K+ + A L +EM +R + PDT Y LI+G+ H EA + M
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
++ Y +L+ G +C +++ LF EM RG++ + + ++++ ++ G+ D A
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 241 ELQNEMMG 248
+ +M+
Sbjct: 454 MVFKQMVS 461
Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 1/227 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ IKA++ ++ TII LC E + L +EM+ G+ N V +L++ G
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A LL ML+ +I VVTF LID K G + EA M + P+ Y
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G C N ++ A+ +F M +D +P+ Y LI+G+ K + ++ + L M++ G
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
+ + YT+++ G + G A+++F +M+ + P +I+ S+L
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV-PTDIMTYSIL 474
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 105/208 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K I+ ++ Y ++I LC ++ D+ LLS M E + N V L+DA+FK G+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L +EM+ I+ +T+ +LI+G C + EA F M PN+ Y
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G CK +E LF EM +R ++ +T YT +I G+ + A + +M
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLF 208
V D+ Y+ L+ GL G L A V+F
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIF 491
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 125/246 (50%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
+ D+ +++ G C + D+ L+ +M E G +T TTL+ F + SEA++
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
L+D+M+ + +VT+ +++GLCK G + A++ +M + NV ++ +ID LC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
K +E A +LF EM + + P+ Y +LI+ + + +A L + M E ++ ++
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
+ +L+ + G L EA L EMI R I PD I L+ +DEA ++ M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 247 MGRGLL 252
+ + L
Sbjct: 390 VSKDCL 395
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 6/241 (2%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K+ ++ Y T+I G C + ED L EM + GL NTV TT++ +F+AG+
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A + +M+ +R+ ++T+ +L+ GLC G + A+ F + + N+ +Y
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I+G+CK + A +LF + + PD Y +I G +EA +L +M E G
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 181 VDLDLNAYTSLVWG-LSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
+ Y +L+ L C A L EM G + D ISL+ G +D++
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAE-LIKEMRSSGFVGDAS-TISLVTNMLHDGRLDKS 623
Query: 240 I 240
Sbjct: 624 F 624
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 122/251 (48%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I DL Y I C S+ + +L++M + G + V ++L++ Y +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A++L+D+M++ + TF LI GL EA+ +M G P++ Y
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+++GLCK+ I+ A NL ++M + + + +ID K+ + A++L M G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ ++ Y SL+ L G +A L M+ + I P+ + +L+ ++ G + EA
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 241 ELQNEMMGRGL 251
+L EM+ R +
Sbjct: 349 KLHEEMIQRSI 359
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 111/228 (48%)
Query: 24 SKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTF 83
+KFE L +M+ G++ + + ++ + + + S AL++L +M+ E +VT
Sbjct: 97 NKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 156
Query: 84 CVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
L++G C S + +A+ +M + G P+ +T LI GL N A L D+M +
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
R PD Y +++G K ALNL N+M + ++ + +++ L + H++
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
A LF EM +GI P+ + SL+ G +A L + M+ + +
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKI 324
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
K +D+ L +M ++ + V L+ A K + +SL ++M I + T+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
+ I+ C+ + A+ +M G P++ ++L++G C I A L D+M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
PDT +T LI G H EA+ L ++M + G DL Y ++V GL + G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L ++M I + ++ +++ + +++ A++L EM +G+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGI 289
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 1/252 (0%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + D Y ++ G + K +++ L+ M + G + CT ++ A + G
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 267
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ A+ +M+D + ++ F LIDGLCK G +++A + M G PNV +TA
Sbjct: 268 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
LIDGLCK+ E+A LF ++ + D P+ YT++I GY K + A L +RM E
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
G+ ++N YT+L+ G + G A L + M G +P+ + + ++ EA
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 240 IELQNEMMGRGL 251
EL N+ GL
Sbjct: 448 YELLNKAFSCGL 459
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 114/251 (45%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
++ K ++ Y ++I G C E K +++L S MKE GL N TTL++ + KAG
Sbjct: 349 VRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGS 408
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A L++ M D + T+ ID LCK EA + + GL + YT
Sbjct: 409 FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTI 468
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI CK+N I +A F M K D LI + + + KE+ L + +G
Sbjct: 469 LIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLG 528
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ YTS++ + G + A FH M G +PD SL+ ++ +DEA
Sbjct: 529 LIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEAC 588
Query: 241 ELQNEMMGRGL 251
+L M+ RGL
Sbjct: 589 KLYEAMIDRGL 599
Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 1/227 (0%)
Query: 27 EDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVL 86
E ++ + EM G+ ++ ++ F+ G+ EA L M+ T ++
Sbjct: 199 EYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLI 258
Query: 87 IDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDM 146
+ LC++GLV AI YF +M D G PN+ +T+LIDGLCKK I++A + +EM +
Sbjct: 259 LTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318
Query: 147 IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV-DLDLNAYTSLVWGLSRCGHLQEAR 205
P+ +TALIDG K ++A L ++ +++ YTS++ G + L A
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
+LF M +G+ P+ +L+ H + G+ A EL N M G +
Sbjct: 379 MLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFM 425
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 36/286 (12%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
K +L + ++I GLC + + + +L EM NG N T L+D K G +A
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 66 SLL-------------------------------DEMLDSRIE-----VTVVTFCVLIDG 89
L EML SR++ V T+ LI+G
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402
Query: 90 LCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPD 149
CK+G A + M D G PN+ Y A ID LCKK+ A L ++ + D
Sbjct: 403 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 462
Query: 150 TTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFH 209
YT LI K +AL RM + G + D+ L+ R ++E+ LF
Sbjct: 463 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 522
Query: 210 EMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
++ G++P + S++ + + G++D A++ + M G + S
Sbjct: 523 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%)
Query: 94 GLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
G + EA+ M + GL P+ +++ + IE A N+FDEM R ++PD+++Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 154 TALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIG 213
++ G + +EA M + G D T ++ L G + A F +MI
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 214 RGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
G P+ I SL+ ++G++ +A E+ EM+ G
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 92/192 (47%)
Query: 51 LMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFG 110
++ + + G +EA+ ++ +M + + + +T +++ + GL+ A + F M G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 111 LHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEAL 170
+ P+ + Y ++ G + I+ A M +R IPD T ++ ++ A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 171 NLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKH 230
+M ++G +L +TSL+ GL + G +++A + EM+ G P+ +L+
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 231 YERGNMDEAIEL 242
+RG ++A L
Sbjct: 333 CKRGWTEKAFRL 344
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 59/144 (40%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M +AD+ L +I C + K ++S+ L + GL T+++ Y K G+
Sbjct: 489 MNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGD 548
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
AL M T+ LI GLCK +V EA + M D GL P
Sbjct: 549 IDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVT 608
Query: 121 LIDGLCKKNCIERARNLFDEMPKR 144
L CK+N A L + + K+
Sbjct: 609 LAYEYCKRNDSANAMILLEPLDKK 632
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 126/251 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M G K ++ +Y TII GLC + +++ LL+ M+++G+ + V +L+ +G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A ++ M I V TF LID K G V EA +++ M L P++ Y+
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI GLC + ++ A +F M + PD Y+ LI+GY K + + + L M++ G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V + YT L+ G R G L A +F M+ G+ P+ I LL + G +++A+
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 241 ELQNEMMGRGL 251
+ +M G+
Sbjct: 417 VILADMQKNGM 427
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 127/252 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I D+ Y ++I GLC ++ D+ ++S M + + + L+DA K G
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
SEA +EM+ ++ +VT+ +LI GLC + EA + FG M G P+V Y+
Sbjct: 272 VSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSI 331
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G CK +E LF EM +R ++ +T YT LI GY + A + RM G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG 391
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V ++ Y L+ GL G +++A V+ +M G+ D + +++ + G + +A
Sbjct: 392 VHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 241 ELQNEMMGRGLL 252
++ + +GL+
Sbjct: 452 DIYCSLNCQGLM 463
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 113/220 (51%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M +++ D+ Y +I+GLC+ S+ ++++ + M G + V + L++ Y K+ +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ L EM + VT+ +LI G C++G + A + F RM G+HPN+ Y
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+ GLC IE+A + +M K M D Y +I G K +A ++ + G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
+ D+ YT+++ GL + G +EA LF +M GILP+E
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 113/236 (47%)
Query: 20 LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
C S+ + L +M + G + V +L++ + + +AL + D+M+ +
Sbjct: 126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPN 185
Query: 80 VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
VV + +IDGLCKS V A+D RM G+ P+V Y +LI GLC A +
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVS 245
Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
M KR++ PD + ALID +K EA M +D D+ Y+ L++GL
Sbjct: 246 CMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYS 305
Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
L EA +F M+ +G PD + L+ + + ++ ++L EM RG++ +
Sbjct: 306 RLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 114/226 (50%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
K++ L +M+ G+ N C L++ + + + S ALS L +M+ E ++VTF
Sbjct: 96 KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFG 155
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
L++G C+ V +A+ F +M G PNV +Y +IDGLCK ++ A +L + M K
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
+ PD Y +LI G + +A + + MT+ + D+ + +L+ + G + EA
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
+ EMI R + PD + L+ +DEA E+ M+ +G
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
K +DS L M + + + L+ A K + + L ++M I + T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
+L++ C+ + A+ + G+M G P++ + +L++G C+ + + A +FD+M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
P+ Y +IDG K + AL+L NRM + G+ D+ Y SL+ GL G +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+ M R I PD +L+ + G + EA E EM+ R L
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 118/248 (47%), Gaps = 1/248 (0%)
Query: 3 GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
G D+ Y ++I G C K ++ LL +M G+ V L+D Y KAGE
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 63 EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
A + +M+ VVTF LIDG C+ G V + + M G+ PN Y+ LI
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
+ LC +N + +AR L ++ +D+IP Y +IDG+ K EA + M +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIEL 242
D +T L+ G G + EA +FH+M+ G PD+I SLL + G EA L
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Query: 243 QNEMMGRG 250
N++ +G
Sbjct: 510 -NQIARKG 516
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 3/256 (1%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK + + L G ++ + K + LL + E + ++ +L++ K
Sbjct: 129 MKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSFE--VEGCCMVVNSLLNTLVKLDR 186
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A+ L DE L + TF +LI GLC G +A++ G M FG P++ Y
Sbjct: 187 VEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNT 246
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMI-PDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
LI G CK N + +A +F ++ + PD YT++I GY K +EA +L + M +
Sbjct: 247 LIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
G+ + LV G ++ G + A + +MI G PD + SL+ + G + +
Sbjct: 307 GIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQG 366
Query: 240 IELQNEMMGRGLLSGS 255
L EM RG+ +
Sbjct: 367 FRLWEEMNARGMFPNA 382
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 1/229 (0%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
+ ED+ L E +T L+ G+ +AL LL M E +VT+
Sbjct: 186 RVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYN 245
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGL-HPNVAVYTALIDGLCKKNCIERARNLFDEMPK 143
LI G CKS + +A + F + + P+V YT++I G CK + A +L D+M +
Sbjct: 246 TLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLR 305
Query: 144 RDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQE 203
+ P + L+DGY K A ++ +M G D+ +TSL+ G R G + +
Sbjct: 306 LGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 204 ARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
L+ EM RG+ P+ L+ + +A EL ++ + ++
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 34/210 (16%)
Query: 76 IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPN--------------------- 114
I + T+ +L LCK+GL A F M G+ PN
Sbjct: 99 IRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFAT 158
Query: 115 ------------VAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
V +L++ L K + +E A LFDE + DT + LI G
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM-IGRGILPDEI 221
++AL L M+ G + D+ Y +L+ G + L +A +F ++ G PD +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 222 LCISLLKKHYERGNMDEAIELQNEMMGRGL 251
S++ + + G M EA L ++M+ G+
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGI 308
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 129/246 (52%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + +L Y ++ LC + + +D+ + EM+E G++ N V TL+ + +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+EA ++D+M I ++T+ LIDG C G + +A+ + GL P++ Y
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+ G C+K A + EM +R + P YT LID + + ++ ++A+ L+ M E+G
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ D++ Y+ L+ G G + EA LF M+ + P+E++ +++ + + G+ A+
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 241 ELQNEM 246
+L EM
Sbjct: 499 KLLKEM 504
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 119/244 (48%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
++ +Y T+I G C + + E +K L EM + GL AN T L++ FK G + +
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
++M + + + T+ +++ LCK G ++A F M + G+ N+ Y LI GLC++
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
+ A + D+M + P+ Y LIDG+ +AL+L + G+ L Y
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
LV G R G A + EM RGI P ++ L+ NM++AI+L+ M
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 249 RGLL 252
GL+
Sbjct: 437 LGLV 440
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 123/243 (50%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
D+ +G +I G C + E S LL E+ E G + N VI TTL+D K GE +A L
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
EM + T+ VLI+GL K+G+ ++ + + +M + G+ PN+ Y +++ LCK
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
+ A +FDEM +R + + Y LI G + EA + ++M G++ +L Y
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMG 248
+L+ G G L +A L ++ RG+ P + L+ +G+ A ++ EM
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 249 RGL 251
RG+
Sbjct: 402 RGI 404
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
K LY II S +EM +NG + L+ + ++ S
Sbjct: 91 KTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS 150
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
+E S++ + V +F +LI G C++G + ++ D + +FG PNV +YT LIDG C
Sbjct: 151 FFNEN-KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
KK IE+A++LF EM K ++ + YT LI+G K+ K+ + +M E GV +L
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y ++ L + G ++A +F EM RG+ + + +L+ ++EA ++ ++M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 247 MGRGL 251
G+
Sbjct: 330 KSDGI 334
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 8/241 (3%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + + ++ Y T+I GLC E K ++ ++ +MK +G+ N + TL+D + G+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ALSL ++ + ++VT+ +L+ G C+ G A M + G+ P+ YT
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID + + +E+A L M + ++PD Y+ LI G+ EA L M E
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD--------EILCISLLKKHYE 232
+ + Y +++ G + G A L EM + + P+ E+LC K E
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 233 R 233
R
Sbjct: 534 R 534
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 126/251 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + +K ++ YGT++ G + + LL M NG+ + + + L+ AY K G+
Sbjct: 327 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A+ + +M + VT+ +I LCKSG V +A+ YF +M D GL P VY +
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI GLC N ERA L EM R + +T + ++ID + K E+ L M +G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
V ++ Y +L+ G G + EA L M+ G+ P+ + +L+ + + M++A+
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 241 ELQNEMMGRGL 251
L EM G+
Sbjct: 567 VLFKEMESSGV 577
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 125/251 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + I D+ Y +II LC + + +L+ M +NG+ + + +++ Y +G+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
P EA+ L +M +E VVT+ +L+D LCK+G EA F M GL P + Y
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
L+ G K + L D M + + PD ++ LI Y K +A+ + ++M + G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
++ + Y +++ L + G +++A + F +MI G+ P I+ SL+ + A
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461
Query: 241 ELQNEMMGRGL 251
EL EM+ RG+
Sbjct: 462 ELILEMLDRGI 472
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 127/254 (50%)
Query: 2 KGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEP 61
+G D+ Y T+I G E + + EM + G+ + V +++ A KA
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247
Query: 62 SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
+A+ +L+ M+ + + +T+ ++ G C SG +EAI + +M G+ P+V Y+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307
Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
+D LCK AR +FD M KR + P+ T Y L+ GY + E L + M G+
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367
Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
D ++ L+ ++ G + +A ++F +M +G+ P+ + +++ + G +++A+
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Query: 242 LQNEMMGRGLLSGS 255
+M+ GL G+
Sbjct: 428 YFEQMIDEGLSPGN 441
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 106/200 (53%)
Query: 12 LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
+Y ++I GLC +K+E ++ L+ EM + G+ NT+ +++D++ K G E+ L + M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 72 LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
+ ++ V+T+ LI+G C +G + EA+ M GL PN Y+ LI+G CK + +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
E A LF EM + PD Y ++ G + A L R+TE G ++L+ Y +
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622
Query: 192 VWGLSRCGHLQEARVLFHEM 211
+ GL + +A +F +
Sbjct: 623 LHGLCKNKLTDDALQMFQNL 642
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 4/252 (1%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDS-KLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
K + D + ++ GLC + + D+ ++L M E G N L+
Sbjct: 116 KGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQ 175
Query: 63 EALSLLDEMLDSR---IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYT 119
EAL LL M D R VV++ +I+G K G +A + M D G+ P+V Y
Sbjct: 176 EALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYN 235
Query: 120 ALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV 179
++I LCK +++A + + M K ++PD Y +++ GY KEA+ +M
Sbjct: 236 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSD 295
Query: 180 GVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
GV+ D+ Y+ L+ L + G EAR +F M RG+ P+ +LL+ + +G + E
Sbjct: 296 GVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM 355
Query: 240 IELQNEMMGRGL 251
L + M+ G+
Sbjct: 356 HGLLDLMVRNGI 367
Score = 101 bits (251), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + + + YG +I LC + ED+ L +M + GL+ ++ +L+ +
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
A L+ EMLD I + + F +ID CK G V E+ F M G+ PNV Y
Sbjct: 457 WERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNT 516
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G C ++ A L M + P+T Y+ LI+GY K ++AL L M G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRG 215
V D+ Y ++ GL + A+ L+ + G
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 117/251 (46%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ ++ D+ Y ++ LC + +++ + M + GL TL+ Y G
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
E LLD M+ + I F +LI K G V +A+ F +M GL+PN Y A
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I LCK +E A F++M + P Y +LI G ++ A L M + G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
+ L+ + S++ + G + E+ LF M+ G+ P+ I +L+ + G MDEA+
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 241 ELQNEMMGRGL 251
+L + M+ GL
Sbjct: 532 KLLSGMVSVGL 542
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
+K ++ Y T+I G C+ K +++ LLS M GL NTV +TL++ Y K +AL
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
L EM S + ++T+ +++ GL ++ A + + R+ + G ++ Y ++ GL
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
CK + A +F + D+ + + +ID LK EA +L + G+ +
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 686
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEA 239
Y + + G L+E LF M G D + ++++ +RG + A
Sbjct: 687 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%)
Query: 12 LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
+ +II C E + +S+ L M G+ N + TL++ Y AG+ EA+ LL M
Sbjct: 478 FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 72 LDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCI 131
+ ++ VT+ LI+G CK + +A+ F M G+ P++ Y ++ GL +
Sbjct: 538 VSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRT 597
Query: 132 ERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSL 191
A+ L+ + + + + Y ++ G K++ +AL + + + + L+ + +
Sbjct: 598 AAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIM 657
Query: 192 VWGLSRCGHLQEARVLFHEMIGRGILPD 219
+ L + G EA+ LF G++P+
Sbjct: 658 IDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 57 KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAID-YFGRMPDFGLHPNV 115
+AG + L ++ V + F L+ GLC +A+D RM + G PNV
Sbjct: 99 RAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNV 158
Query: 116 AVYTALIDGLCKKNCIERARNLFDEMPKR---DMIPDTTAYTALIDGYLKHESFKEALNL 172
Y L+ GLC +N + A L M PD +YT +I+G+ K +A +
Sbjct: 159 FSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYST 218
Query: 173 KNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYE 232
+ M + G+ D+ Y S++ L + + +A + + M+ G++PD + S+L +
Sbjct: 219 YHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 278
Query: 233 RGNMDEAIELQNEMMGRGL 251
G EAI +M G+
Sbjct: 279 SGQPKEAIGFLKKMRSDGV 297
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M +K + Y T+I G C S+ ED+ +L EM+ +G++ + + ++ F+
Sbjct: 537 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 596
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ A L + +S ++ + T+ +++ GLCK+ L +A+ F + L +
Sbjct: 597 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 656
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+ID L K + A++LF ++P+ Y + + + +E L M + G
Sbjct: 657 MIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEA 204
+D +V L + G + A
Sbjct: 717 CTVDSGMLNFIVRELLQRGEITRA 740
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 120 bits (302), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 3/241 (1%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
IK + Y T++ G + + E ++L++SEMK G + ++ G SE
Sbjct: 256 IKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE-- 313
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
+L EM + + V++ +LI G +G + A Y M G+ P Y LI GL
Sbjct: 314 -VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
+N IE A L E+ ++ ++ D+ Y LI+GY +H K+A L + M G+
Sbjct: 373 FMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
YTSL++ L R +EA LF +++G+G+ PD ++ +L+ H GNMD A L E
Sbjct: 433 FTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKE 492
Query: 246 M 246
M
Sbjct: 493 M 493
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 125/240 (52%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y T+I GL +E+K E +++L+ E++E G+ ++V L++ Y + G+ +A +L DEM+
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMM 424
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
I+ T T+ LI LC+ REA + F ++ G+ P++ + L+DG C ++
Sbjct: 425 TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMD 484
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
RA +L EM + PD Y L+ G F+EA L M G+ D +Y +L+
Sbjct: 485 RAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLI 544
Query: 193 WGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
G S+ G + A ++ EM+ G P + +LLK + + A EL EM G++
Sbjct: 545 SGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 38/286 (13%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
MK K + D+ Y I+ +C E + + +L EMKE GL ++V L+ G+
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 61 PSEALSLLDEM--------------------LDSRIEVT---------------VVTFCV 85
A + DEM ++++IE VT+ +
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 86 LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
LI+G C+ G ++A M G+ P YT+LI LC+KN A LF+++ +
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
M PD L+DG+ + A +L M + ++ D Y L+ GL G +EAR
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L EM RGI PD I +L+ + ++G+ A +++EM+ G
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 32/248 (12%)
Query: 36 MKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGL 95
MKE G T C ++ + A +M I+ V TF ++I+ LCK G
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 96 VREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR----DM----- 146
+++A + G M FG+ P + Y L+ G + IE AR + EM + DM
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 147 -----------------------IPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDL 183
+PD+ +Y LI G + + A ++ M + G+
Sbjct: 301 ILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360
Query: 184 DLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQ 243
Y +L+ GL ++ A +L E+ +GI+ D + L+ + + G+ +A L
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420
Query: 244 NEMMGRGL 251
+EMM G+
Sbjct: 421 DEMMTDGI 428
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y ++I+ LC ++K ++ L ++ G+ + V+ TLMD + G A SLL EM
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIE 132
I VT+ L+ GLC G EA + G M G+ P+ Y LI G KK +
Sbjct: 495 MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554
Query: 133 RARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLV 192
A + DEM P Y AL+ G K++ + A L M G+ + +++ S++
Sbjct: 555 HAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Query: 193 WGLS 196
+S
Sbjct: 615 EAMS 618
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%)
Query: 5 NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
+I D Y ++ GLC E KFE+++ L+ EMK G+ + + TL+ Y K G+ A
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA 556
Query: 65 LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
+ DEML T++T+ L+ GL K+ A + M G+ PN + + ++I+
Sbjct: 557 FMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Query: 125 L 125
+
Sbjct: 617 M 617
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 117/266 (43%), Gaps = 35/266 (13%)
Query: 16 IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
++ LC + K E LS+++E G+ + V TL+ AY G EA L++ M
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 76 IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
V T+ +I+GLCK G A + F M GL P+ Y +L+ CKK +
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 136 NLFDEMPKRD-----------------------------------MIPDTTAYTALIDGY 160
+F +M RD +IPD YT LI GY
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 161 LKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
+ A+NL+N M + G +D+ Y +++ GL + L EA LF+EM R + PD
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480
Query: 221 ILCISLLKKHYERGNMDEAIELQNEM 246
L+ H + GN+ A+EL +M
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 134/286 (46%), Gaps = 35/286 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M GK + Y T+I GLC K+E +K + +EM +GL+ ++ +L+ K G+
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
E + +M + +V F ++ +SG + +A+ YF + + GL P+ +YT
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 121 LIDGLCKKNCIERARN-----------------------------------LFDEMPKRD 145
LI G C+K I A N LF+EM +R
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
+ PD+ T LIDG+ K + + A+ L +M E + LD+ Y +L+ G + G + A+
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
++ +M+ + ILP I L+ +G++ EA + +EM+ + +
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 2/238 (0%)
Query: 16 IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
+I G C +++ L +MKE + + V TL+D + K G+ A + +M+
Sbjct: 486 LIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 76 IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
I T +++ +L++ LC G + EA + M + P V + ++I G C+
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGE 605
Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEV--GVDLDLNAYTSLVW 193
+ ++M +PD +Y LI G+++ E+ +A L +M E G+ D+ Y S++
Sbjct: 606 SFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILH 665
Query: 194 GLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
G R ++EA V+ +MI RG+ PD ++ + N+ EA + +EM+ RG
Sbjct: 666 GFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 112/219 (51%)
Query: 32 LLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLC 91
+ E+ +G+ N +++A K G+ + + L ++ + + +VT+ LI
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 92 KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
GL+ EA + MP G P V Y +I+GLCK ERA+ +F EM + + PD+T
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
Y +L+ K E + + M V DL ++S++ +R G+L +A + F+ +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
G++PD ++ L++ + +G + A+ L+NEM+ +G
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 105/228 (46%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
K ++ + ++ G T + C L+ + + G A + E+ S + + V T
Sbjct: 180 KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 239
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
++++ LCK G + + + ++ + G++P++ Y LI K +E A L + MP +
Sbjct: 240 IMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK 299
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
P Y +I+G KH ++ A + M G+ D Y SL+ + G + E
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
+F +M R ++PD + S++ GN+D+A+ N + GL+
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 108/238 (45%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
D +Y +I G C + + L +EM + G + V T++ K EA L
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 69 DEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKK 128
+EM + + T +LIDG CK G ++ A++ F +M + + +V Y L+DG K
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 129 NCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAY 188
I+ A+ ++ +M ++++P +Y+ L++ EA + + M + +
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 189 TSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
S++ G R G+ + +MI G +PD I +L+ NM +A L +M
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKM 646
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 13 YGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEML 72
Y ++ LC + ++ + EM + +IC +++ Y ++G S+ S L++M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 73 DSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPD--FGLHPNVAVYTALIDGLCKKNC 130
+++ LI G + + +A +M + GL P+V Y +++ G C++N
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 131 IERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
++ A + +M +R + PD + YT +I+G++ ++ EA + + M + G D
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%)
Query: 43 ANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
+N + L+ Y +A + EA + V++ LI L + G V A
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
+ + G+ NV +++ LCK +E+ ++ ++ + PD Y LI Y
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
+EA L N M G + Y +++ GL + G + A+ +F EM+ G+ PD
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLL 252
SLL + ++G++ E ++ ++M R ++
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVV 372
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%)
Query: 114 NVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLK 173
N +V+ LI + + A F + + A ALI ++ + A +
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 174 NRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYER 233
++ GV +++ +V L + G +++ ++ +G+ PD + +L+ + +
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 234 GNMDEAIELQNEMMGRGLLSG 254
G M+EA EL N M G+G G
Sbjct: 284 GLMEEAFELMNAMPGKGFSPG 304
Score = 37.7 bits (86), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 37/65 (56%)
Query: 9 DLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLL 68
D+ Y +I+ G C +++ ++++++L +M E G+ + T +++ + +EA +
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH 715
Query: 69 DEMLD 73
DEML
Sbjct: 716 DEMLQ 720
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 125/236 (52%)
Query: 20 LCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVT 79
+C+ S+ + L +M + G + V T+L++ Y +A++L D++L +
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187
Query: 80 VVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFD 139
VVT+ LI LCK+ + A++ F +M G PNV Y AL+ GLC+ A L
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247
Query: 140 EMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCG 199
+M KR + P+ +TALID ++K EA L N M ++ V D+ Y SL+ GL G
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYG 307
Query: 200 HLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
L EAR +F+ M G P+E++ +L+ + +++ +++ EM +G+++ +
Sbjct: 308 LLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%)
Query: 5 NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEA 64
++ D+ YG++I GLC+ ++++ + M+ NG N VI TTL+ + K+ +
Sbjct: 288 SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDG 347
Query: 65 LSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDG 124
+ + EM + +T+ VLI G C G A + F +M P++ Y L+DG
Sbjct: 348 MKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 125 LCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLD 184
LC +E+A +F+ M KR+M + YT +I G K ++A +L + G+ +
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 185 LNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDE 220
+ YT+++ G R G + EA LF +M G LP+E
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 105/217 (48%)
Query: 3 GKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPS 62
G K ++ Y T+I LC + L ++M NG N V L+ + G
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 63 EALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALI 122
+A LL +M+ RIE V+TF LID K G + EA + + M ++P+V Y +LI
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 123 DGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVD 182
+GLC ++ AR +F M + P+ YT LI G+ K + ++ + + M++ GV
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 183 LDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
+ YT L+ G G A+ +F++M R PD
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 123/281 (43%), Gaps = 35/281 (12%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
+ ++ Y ++ GLC ++ D+ LL +M + + N + T L+DA+ K G+ EA
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKE 279
Query: 67 LLDEMLDSRIEVTVVTF-----------------------------------CVLIDGLC 91
L + M+ + V T+ LI G C
Sbjct: 280 LYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFC 339
Query: 92 KSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTT 151
KS V + + F M G+ N YT LI G C + A+ +F++M R PD
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIR 399
Query: 152 AYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEM 211
Y L+DG + ++AL + M + +D+++ YT ++ G+ + G +++A LF +
Sbjct: 400 TYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Query: 212 IGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGLL 252
+G+ P+ I +++ RG + EA L +M G L
Sbjct: 460 FSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 97.4 bits (241), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
+ DL + +++ G C ++ ED+ L ++ G N V TTL+ K + A+
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
L ++M + VVT+ L+ GLC+ G +A M + PNV +TALID
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
K + A+ L++ M + + PD Y +LI+G + EA + M G +
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
YT+L+ G + +++ +F+EM +G++ + I L++ + G D A E+ N+
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 246 MMGR 249
M R
Sbjct: 389 MSSR 392
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 35/177 (19%)
Query: 12 LYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEM 71
+Y T+I G C + ED + EM + G+ ANT+ T L+ Y G P A + ++M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 72 LDSR-----------------------------------IEVTVVTFCVLIDGLCKSGLV 96
R +++ +VT+ ++I G+CK G V
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 97 REAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAY 153
+A D F + G+ PNV YT +I G C++ I A +LF +M + +P+ + Y
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
+F D+ L + M + + + T L+ K +SL ++M I + T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
+++ +C S A + G+M G P++ +T+L++G C N IE A LFD++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
P+ YT LI K+ A+ L N+M G ++ Y +LV GL G +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMM 247
L +M+ R I P+ I +L+ + G + EA EL N M+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%)
Query: 62 SEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTAL 121
++AL L M+ SR +++ F L+ + K I F +M G+ P + +
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 122 IDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGV 181
+ +C + RA +M K PD +T+L++GY ++A+ L +++ +G
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 182 DLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIE 241
++ YT+L+ L + HL A LF++M G P+ + +L+ E G +A
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 242 LQNEMMGR 249
L +MM R
Sbjct: 245 LLRDMMKR 252
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 128/249 (51%)
Query: 7 KADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALS 66
K D + T+I GL + +K ++ L+ M + G + V +++ K G+ AL+
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 67 LLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLC 126
LL++M ++IE VV + +ID LCK +A++ F M + G+ PNV Y++LI LC
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 127 KKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLN 186
A L +M +R + P+ ++ALID ++K +A L M + +D ++
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 187 AYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEM 246
Y+SL+ G L EA+ + MI + LP+ + +L+ + +D+ +EL EM
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 247 MGRGLLSGS 255
RGL+ +
Sbjct: 420 SQRGLVGNT 428
Score = 117 bits (293), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 112/219 (51%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K ++ ++ Y ++I LC ++ D+ LLS+M E + N V + L+DA+ K G+
Sbjct: 279 MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGK 338
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+A L +EM+ I+ + T+ LI+G C + EA M PNV Y
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNT 398
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G CK +++ LF EM +R ++ +T YT LI G+ + A + +M VG
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
V ++ Y L+ GL + G L +A V+F + + PD
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 497
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 117/219 (53%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ I+A++ +Y T+I LC +D+ L +EM+ G+ N + ++L+ G
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
S+A LL +M++ +I +VTF LID K G + +A + M + PN+ Y++
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LI+G C + + A+ + + M ++D +P+ Y LI+G+ K + + + L M++ G
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPD 219
+ + YT+L+ G + A+++F +M+ G+ P+
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 127/251 (50%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M + + DL YG ++ GLC + + LL++M+ + AN VI +T++D+ K
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+AL+L EM + + V+T+ LI LC G +A M + ++PN+ ++A
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
LID KK + +A L++EM KR + P+ Y++LI+G+ + EA + M
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAI 240
++ Y +L+ G + + + LF EM RG++ + + +L+ ++ + D A
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 241 ELQNEMMGRGL 251
+ +M+ G+
Sbjct: 449 MVFKQMVSVGV 459
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 122/246 (49%)
Query: 6 IKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEAL 65
I +L Y +I C S+ + LL +M + G + V +L++ + S+A+
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168
Query: 66 SLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGL 125
+L+D+M++ + VTF LI GL EA+ RM G P++ Y A+++GL
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228
Query: 126 CKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDL 185
CK+ + A NL ++M + + Y+ +ID K+ +ALNL M GV ++
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288
Query: 186 NAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNE 245
Y+SL+ L G +A L +MI R I P+ + +L+ ++G + +A +L E
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 246 MMGRGL 251
M+ R +
Sbjct: 349 MIKRSI 354
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 116/255 (45%), Gaps = 15/255 (5%)
Query: 12 LYGTIIWGLCIESKFEDSKLLLSEMKEN---------------GLTANTVICTTLMDAYF 56
L+G + S E SKLL + K N G++ N L++ +
Sbjct: 65 LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124
Query: 57 KAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVA 116
+ S AL+LL +M+ E +VT L++G C + +A+ +M + G P+
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTV 184
Query: 117 VYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRM 176
+T LI GL N A L D M +R PD Y A+++G K ALNL N+M
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
Query: 177 TEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNM 236
++ ++ Y++++ L + H +A LF EM +G+ P+ I SL+ G
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
Query: 237 DEAIELQNEMMGRGL 251
+A L ++M+ R +
Sbjct: 305 SDASRLLSDMIERKI 319
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M ++I ++ Y ++I G C+ + ++K +L M N V TL++ + KA
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
+ + L EM + VT+ LI G ++ A F +M G+HPN+ Y
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFK 167
L+DGLCK + +A +F+ + + M PD Y +I+G K +K
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 107/227 (47%)
Query: 25 KFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFC 84
+ +D+ L M ++ + + + L+ A K + +S ++M I + T+
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 85 VLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKR 144
+LI+ C+ + A+ G+M G P++ +L++G C N I A L D+M +
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 145 DMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEA 204
PDT +T LI G H EA+ L +RM + G DL Y ++V GL + G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 205 RVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
L ++M I + ++ +++ + + D+A+ L EM +G+
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 35/138 (25%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKA-- 58
M K+ ++ Y T+I G C + + L EM + GL NTV TTL+ +F+A
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 59 ---------------------------------GEPSEALSLLDEMLDSRIEVTVVTFCV 85
G+ ++A+ + + + S +E + T+ +
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNI 503
Query: 86 LIDGLCKSGLVREAIDYF 103
+I+G+CK+G + YF
Sbjct: 504 MIEGMCKAGKWKMGGIYF 521
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 130/285 (45%), Gaps = 35/285 (12%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ + I++D+ +Y ++I C + + + LL E+ E GL+ ++ L+D K GE
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREA-------------IDYFG--- 104
A L++EM + +T V F LIDG C+ G+V EA D F
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 105 -------------------RMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
RM + G+ + YT LID CK+ +E A+ LF EM +
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
+ P+ Y +I Y K KEA L+ M G+D D YTSL+ G ++ EA
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM 559
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRG 250
LF EM +G+ + + ++ + G DEA L +EM +G
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 112/227 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M+ K + ++ T+I G C + +++ ++ M++ G A+ C T+ + +
Sbjct: 390 MQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKR 449
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA L M++ ++++ V++ LID CK G V EA F M G+ PN Y
Sbjct: 450 YDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 121 LIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVG 180
+I CK+ I+ AR L M M PD+ YT+LI G ++ EA+ L + M G
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKG 569
Query: 181 VDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEILCISLL 227
+D + YT ++ GLS+ G EA L+ EM +G D + +L+
Sbjct: 570 LDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 128/283 (45%), Gaps = 35/283 (12%)
Query: 4 KNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSE 63
K IK + Y TII + F + +L MK++G+ N V T LM+ K G+ S+
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD 312
Query: 64 ALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALID 123
A L DEM + IE V + LI C+ G ++ A F + + GL P+ Y ALID
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372
Query: 124 GLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLKH-------------------- 163
G+CK + A L +EM + + + LIDGY +
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 164 ---------------ESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLF 208
+ + EA RM E GV L +YT+L+ + G+++EA+ LF
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 209 HEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
EM +G+ P+ I ++ + ++G + EA +L+ M G+
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGM 535
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 113/236 (47%)
Query: 16 IIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSR 75
++ GLC + E SK L+ E G+ T+++AY K + S +L M
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 76 IEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERAR 135
+ VT+ +L++ K+G + +A F M + G+ +V VYT+LI C+K ++RA
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 136 NLFDEMPKRDMIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGL 195
LFDE+ ++ + P + Y ALIDG K A L N M GV++ + +L+ G
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 196 SRCGHLQEARVLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
R G + EA +++ M +G D C ++ DEA + MM G+
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%)
Query: 26 FEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGEPSEALSLLDEMLDSRIEVTVVTFCV 85
FE+ + M + GL+ + C + A K L + M+DS +++TV + +
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 86 LIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRD 145
+++GLC+ G V ++ G+ P Y +I+ K+ + M K
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 146 MIPDTTAYTALIDGYLKHESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEAR 205
++ + YT L++ +K+ +A L + M E G++ D++ YTSL+ R G+++ A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 206 VLFHEMIGRGILPDEILCISLLKKHYERGNMDEAIELQNEMMGRGL 251
+LF E+ +G+ P +L+ + G M A L NEM +G+
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 22/273 (8%)
Query: 5 NIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTV--ICTTLMD--------- 53
N+K DL T+ L +F + + LL+ + +G V + + ++D
Sbjct: 92 NLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEKFE 151
Query: 54 -----------AYFKAGEPSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDY 102
Y G E L + D M+ + + + V + K + ++
Sbjct: 152 FFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEI 211
Query: 103 FGRMPDFGLHPNVAVYTALIDGLCKKNCIERARNLFDEMPKRDMIPDTTAYTALIDGYLK 162
F RM D G+ V T +++GLC++ +E+++ L E + + P+ Y +I+ Y+K
Sbjct: 212 FRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK 271
Query: 163 HESFKEALNLKNRMTEVGVDLDLNAYTSLVWGLSRCGHLQEARVLFHEMIGRGILPDEIL 222
F + M + GV + YT L+ + G + +A LF EM RGI D +
Sbjct: 272 QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 223 CISLLKKHYERGNMDEAIELQNEMMGRGLLSGS 255
SL+ + +GNM A L +E+ +GL S
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%)
Query: 1 MKGKNIKADLPLYGTIIWGLCIESKFEDSKLLLSEMKENGLTANTVICTTLMDAYFKAGE 60
M K ++ + Y +I+ C + K ++++ L + M+ NG+ ++ T+L+ A
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 61 PSEALSLLDEMLDSRIEVTVVTFCVLIDGLCKSGLVREAIDYFGRMPDFGLHPNVAVYTA 120
EA+ L EM ++ VT+ V+I GL K+G EA + M G + VYTA
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTA 614
Query: 121 LIDGL 125
LI +
Sbjct: 615 LIGSM 619
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,800,905
Number of Sequences: 539616
Number of extensions: 3921347
Number of successful extensions: 15896
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 9195
Number of HSP's gapped (non-prelim): 3257
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)