BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041261
AVWGQKNGSHNSNNTSDDDGPNKIIVGSSDNWHFGFNYSVWAFQNAPFYVNDVLVFKYDP
PNDTVFPHSEYLLPNLWSYLRCDIGWQPYYFACDERGGLHWRDGRMKFMVLPLLRRWHY

High Scoring Gene Products

Symbol, full name Information P value
AT2G15780 protein from Arabidopsis thaliana 1.2e-28
AT2G15770 protein from Arabidopsis thaliana 1.8e-22
AT4G34300 protein from Arabidopsis thaliana 2.3e-07
AT4G33930 protein from Arabidopsis thaliana 5.9e-07
AT3G17675 protein from Arabidopsis thaliana 0.00093

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041261
        (119 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044611 - symbol:AT2G15780 species:3702 "Arabi...   235  1.2e-28   2
TAIR|locus:2044621 - symbol:AT2G15770 species:3702 "Arabi...   205  1.8e-22   2
TAIR|locus:2116199 - symbol:AT4G34300 species:3702 "Arabi...   124  2.3e-07   1
TAIR|locus:2118909 - symbol:AT4G33930 species:3702 "Arabi...   121  5.9e-07   1
TAIR|locus:4010713753 - symbol:AT3G17675 species:3702 "Ar...    84  0.00093   1


>TAIR|locus:2044611 [details] [associations]
            symbol:AT2G15780 species:3702 "Arabidopsis thaliana"
            [GO:0005507 "copper ion binding" evidence=IEA] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0009055 "electron carrier
            activity" evidence=IEA] InterPro:IPR003245 Pfam:PF02298
            PROSITE:PS51485 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0009055 GO:GO:0005507 Gene3D:2.60.40.420 InterPro:IPR008972
            SUPFAM:SSF49503 EMBL:AC006438 eggNOG:NOG44165
            ProtClustDB:CLSN2913161 EMBL:AF410284 EMBL:AY093722 IPI:IPI00547208
            PIR:C84533 RefSeq:NP_565380.1 UniGene:At.26527
            ProteinModelPortal:Q9XIL1 SMR:Q9XIL1 PRIDE:Q9XIL1
            EnsemblPlants:AT2G15780.1 GeneID:816073 KEGG:ath:AT2G15780
            TAIR:At2g15780 HOGENOM:HOG000153856 InParanoid:Q9XIL1 OMA:WASKTAP
            ArrayExpress:Q9XIL1 Genevestigator:Q9XIL1 Uniprot:Q9XIL1
        Length = 257

 Score = 235 (87.8 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
 Identities = 43/82 (52%), Positives = 55/82 (67%)

Query:     3 WGQKNGSHNSNNTSDDDGPNKIIVGSSDNWHFGFNYSVWAFQNAPFYVNDVLVFKYDPPN 62
             WG   G H+ N  +  +GP KIIVG    W +GFNY+ WA + APF++ND+LVFKY+PP 
Sbjct:   125 WGY--GGHSKNYNATYNGPRKIIVGGDKEWTYGFNYADWASKTAPFFLNDILVFKYNPP- 181

Query:    63 DTVFPHSEYLLPNLWSYLRCDI 84
                F HS YLLPN  SY +CD+
Sbjct:   182 -APFTHSVYLLPNPSSYEKCDV 202

 Score = 99 (39.9 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
 Identities = 16/31 (51%), Positives = 21/31 (67%)

Query:    87 QPYYFACDERGGLHWRDGRMKFMVLPLLRRW 117
             +PYY +C E  G H  +G MKF V+P+L RW
Sbjct:   227 KPYYISCGEHDGAHCSNGTMKFTVMPMLPRW 257

 Score = 38 (18.4 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query:     3 WGQKNGSHNSNNTSDDDGPNKIIVGSSDN---WHFGF 36
             WG   GS+ S+ ++   G      GSS N   W +G+
Sbjct:    54 WGWGQGSNYSSGSASTPGSGWGF-GSSRNGSGWGWGW 89

 Score = 33 (16.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
 Identities = 9/33 (27%), Positives = 15/33 (45%)

Query:     3 WGQKNGSHNSNNTSDDDGPNKIIVGSSDNWHFG 35
             WG   G   +N  S   G +   +G ++N+  G
Sbjct:    85 WGWGWGGVPNNTHSSGSGGSGWGMGPNNNYSSG 117


>TAIR|locus:2044621 [details] [associations]
            symbol:AT2G15770 species:3702 "Arabidopsis thaliana"
            [GO:0005507 "copper ion binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009055 "electron carrier activity"
            evidence=IEA] InterPro:IPR003245 Pfam:PF02298 PROSITE:PS51485
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009055 GO:GO:0005507
            Gene3D:2.60.40.420 InterPro:IPR008972 SUPFAM:SSF49503 EMBL:AC006438
            EMBL:AJ441119 IPI:IPI00535222 PIR:B84533 RefSeq:NP_179179.1
            UniGene:At.40354 ProteinModelPortal:Q9XIL0 SMR:Q9XIL0
            EnsemblPlants:AT2G15770.1 GeneID:816072 KEGG:ath:AT2G15770
            TAIR:At2g15770 eggNOG:euNOG12098 InParanoid:Q9XIL0
            ProtClustDB:CLSN2913161 Genevestigator:Q9XIL0 Uniprot:Q9XIL0
        Length = 301

 Score = 205 (77.2 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 41/87 (47%), Positives = 50/87 (57%)

Query:     3 WGQKNGSHNSNNTSDDDG-----PNKIIVGSSDNWHFGFNYSVWAFQNAPFYVNDVLVFK 57
             WG  +   NS+ +    G     P KIIVG SD W  G +Y  WA +NAPFYVNDVLVFK
Sbjct:   120 WGSNDNDSNSSGSDSGSGLDRETPKKIIVGGSDGWKKGLDYKDWASKNAPFYVNDVLVFK 179

Query:    58 YDPPNDTVFPHSEYLLPNLWSYLRCDI 84
             YD        ++ YL  + WSY+ CDI
Sbjct:   180 YD--KSAKRRNNVYLFKDRWSYMNCDI 204

 Score = 70 (29.7 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query:    87 QPYYFACDERGGLHWRDGRMKFMVLPLL 114
             QPY+FA  E  G + R+  MKF + P+L
Sbjct:   229 QPYFFASGEHDGDYCRNHNMKFTIFPVL 256


>TAIR|locus:2116199 [details] [associations]
            symbol:AT4G34300 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR003245
            PROSITE:PS51485 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0009055 GO:GO:0005507 EMBL:AL035521 EMBL:AL161585
            Gene3D:2.60.40.420 InterPro:IPR008972 SUPFAM:SSF49503
            eggNOG:NOG251775 HOGENOM:HOG000115158 ProtClustDB:CLSN2685708
            IPI:IPI00532353 PIR:T04776 RefSeq:NP_195156.1 UniGene:At.54599
            ProteinModelPortal:Q9SYZ5 SMR:Q9SYZ5 EnsemblPlants:AT4G34300.1
            GeneID:829580 KEGG:ath:AT4G34300 TAIR:At4g34300 OMA:SADAWSW
            Genevestigator:Q9SYZ5 Uniprot:Q9SYZ5
        Length = 313

 Score = 124 (48.7 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 36/97 (37%), Positives = 54/97 (55%)

Query:     4 GQKNGSHNSN---NTSDDDGPN---KIIVGSSDNWHFGFNYSVWAFQNAPFYVNDVLVFK 57
             G  +GS++S+   +T +   P+   KI V     W  G+ Y+ W  ++APFYVNDVLVF 
Sbjct:   167 GHSSGSNHSSIIGSTHNHTAPSLGRKIAVTV---WKNGYGYTEWTAKHAPFYVNDVLVFT 223

Query:    58 YDPPND-----TVFPHSE-----YLLPNLWSYLRCDI 84
             Y+  ND     T   H +     YLLP++ S+ RC++
Sbjct:   224 YNN-NDQTQSKTKHHHDKKKNDVYLLPDMKSFKRCNV 259


>TAIR|locus:2118909 [details] [associations]
            symbol:AT4G33930 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] InterPro:IPR003245
            PROSITE:PS51485 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0009055 GO:GO:0005507 EMBL:AL031032 EMBL:AL161584
            Gene3D:2.60.40.420 InterPro:IPR008972 SUPFAM:SSF49503
            IPI:IPI00530852 PIR:T05221 RefSeq:NP_195119.1 UniGene:At.65450
            ProteinModelPortal:O81761 SMR:O81761 EnsemblPlants:AT4G33930.1
            GeneID:829538 KEGG:ath:AT4G33930 TAIR:At4g33930 eggNOG:NOG251775
            HOGENOM:HOG000115158 ProtClustDB:CLSN2685708 Genevestigator:O81761
            Uniprot:O81761
        Length = 343

 Score = 121 (47.7 bits), Expect = 5.9e-07, P = 5.9e-07
 Identities = 30/80 (37%), Positives = 43/80 (53%)

Query:    13 NNTSDDDGPNKIIVGSSDNWHFGFNYSVWAFQNAPFYVNDVLVFKY--DPPNDTVFPHSE 70
             N+T+      KI V     W  G+ Y+ W  ++APFYV+DVLVFKY  D    +   H  
Sbjct:   213 NHTAPIPAGRKIAVTV---WKNGYGYTEWTAKHAPFYVSDVLVFKYNNDDQTQSKTKHRN 269

Query:    71 ------YLLPNLWSYLRCDI 84
                   YLLP++ S+ RC++
Sbjct:   270 KKKNDVYLLPDMKSFKRCNV 289


>TAIR|locus:4010713753 [details] [associations]
            symbol:AT3G17675 species:3702 "Arabidopsis thaliana"
            [GO:0005507 "copper ion binding" evidence=IEA] [GO:0005886 "plasma
            membrane" evidence=ISM] [GO:0009055 "electron carrier activity"
            evidence=IEA] InterPro:IPR003245 Pfam:PF02298 ProDom:PD003122
            PROSITE:PS51485 EMBL:CP002686 GO:GO:0009055 GO:GO:0005507
            Gene3D:2.60.40.420 InterPro:IPR008972 SUPFAM:SSF49503
            IPI:IPI00534093 RefSeq:NP_001078172.1 UniGene:At.72183
            ProteinModelPortal:F4J6D1 SMR:F4J6D1 PRIDE:F4J6D1
            EnsemblPlants:AT3G17675.1 GeneID:5008006 KEGG:ath:AT3G17675
            OMA:SEGTEHI Uniprot:F4J6D1
        Length = 106

 Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
 Identities = 17/34 (50%), Positives = 20/34 (58%)

Query:    25 IVGSSDNWHFGFNYSVWAFQNAPFYVNDVLVFKY 58
             IVG S+ W    NY+ W  Q   F+V DVLVF Y
Sbjct:    10 IVGDSNGWELFTNYTNWT-QGREFHVGDVLVFNY 42


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.142   0.515    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      119       119   0.00091  102 3  12 22  0.49    30
                                                     29  0.47    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  586 (62 KB)
  Total size of DFA:  137 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.24u 0.19s 12.43t   Elapsed:  00:00:01
  Total cpu time:  12.25u 0.19s 12.44t   Elapsed:  00:00:01
  Start:  Fri May 10 05:23:25 2013   End:  Fri May 10 05:23:26 2013

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