BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041264
PRCDAEAAGDALWNNGAVWGKMLRHKCTEARNAAPHPWTGNNVNVKIVDHCSGCPSTIDL
SREAFTQIANPVSGIINIDYHGPIDYLSSSS

High Scoring Gene Products

Symbol, full name Information P value
AT4G30380 protein from Arabidopsis thaliana 1.6e-24
PNP-A
plant natriuretic peptide A 		protein from Arabidopsis thaliana 5.3e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041264
        (91 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2118656 - symbol:AT4G30380 "AT4G30380" species...   280  1.6e-24   1
TAIR|locus:2053983 - symbol:PNP-A "plant natriuretic pept...   124  5.3e-08   1


>TAIR|locus:2118656 [details] [associations]
            symbol:AT4G30380 "AT4G30380" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0071456 "cellular response
            to hypoxia" evidence=IEP] GO:GO:0005576 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0071456 EMBL:AL161577
            IPI:IPI00532361 PIR:C85355 RefSeq:NP_194767.1 UniGene:At.54557
            ProteinModelPortal:Q9M0C2 SMR:Q9M0C2 EnsemblPlants:AT4G30380.1
            GeneID:829161 KEGG:ath:AT4G30380 TAIR:At4g30380 eggNOG:NOG296324
            HOGENOM:HOG000242042 InParanoid:Q9M0C2 OMA:PHPCTGK PhylomeDB:Q9M0C2
            ProtClustDB:PLN03024 Genevestigator:Q9M0C2 GermOnline:AT4G30380
            Gene3D:2.40.40.10 InterPro:IPR014733 InterPro:IPR009009
            InterPro:IPR007112 Pfam:PF03330 SMART:SM00837 SUPFAM:SSF50685
            PROSITE:PS50842 Uniprot:Q9M0C2
        Length = 123

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 54/75 (72%), Positives = 59/75 (78%)

Query:     7 AAGDALWNNGAVWGKMLRHKCTEARNAAPHPWTGNNVNVKIVDHC-SGCPSTIDLSREAF 65
             AA D LW+NG V GKM   KC+  RNA PHP TG +V VKIVDHC SGC ST+DLSREAF
Sbjct:    47 AASDTLWDNGRVCGKMFTVKCSGPRNAVPHPCTGKSVKVKIVDHCPSGCASTLDLSREAF 106

Query:    66 TQIANPVSGIINIDY 80
              QIANPV+GIINIDY
Sbjct:   107 AQIANPVAGIINIDY 121


>TAIR|locus:2053983 [details] [associations]
            symbol:PNP-A "plant natriuretic peptide A" species:3702
            "Arabidopsis thaliana" [GO:0005576 "extracellular region"
            evidence=ISM;ISS] [GO:0005618 "cell wall" evidence=IDA] [GO:0048046
            "apoplast" evidence=IDA] [GO:0010230 "alternative respiration"
            evidence=IDA] [GO:0009627 "systemic acquired resistance"
            evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
            stress" evidence=RCA] GO:GO:0005618 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0048046 GO:GO:0010230 EMBL:AC005724
            HOGENOM:HOG000242042 Gene3D:2.40.40.10 InterPro:IPR014733
            InterPro:IPR009009 InterPro:IPR007112 Pfam:PF03330 SMART:SM00837
            SUPFAM:SSF50685 PROSITE:PS50842 EMBL:AY065269 EMBL:AY142603
            IPI:IPI00537939 PIR:A84567 RefSeq:NP_849979.1 UniGene:At.28538
            ProteinModelPortal:Q9ZV52 SMR:Q9ZV52 STRING:Q9ZV52
            EnsemblPlants:AT2G18660.1 GeneID:816381 KEGG:ath:AT2G18660
            TAIR:At2g18660 eggNOG:NOG312066 InParanoid:Q9ZV52 OMA:RYRVRCI
            PhylomeDB:Q9ZV52 ProtClustDB:CLSN2918029 Genevestigator:Q9ZV52
            GermOnline:AT2G18660 Uniprot:Q9ZV52
        Length = 130

 Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 28/70 (40%), Positives = 37/70 (52%)

Query:    12 LWNNGAVWGKMLRHKCTEARNAAPHPWTGNNVNVKIVDHC-SGCPSTIDLSREAFTQIAN 70
             LW NG   G+  R +C  A        TG  V+VK+VD C   C   ++LSR+AF  IAN
Sbjct:    58 LWQNGRACGRRYRVRCIGATYNFDRACTGRTVDVKVVDFCREPCNGDLNLSRDAFRVIAN 117

Query:    71 PVSGIINIDY 80
               +G I + Y
Sbjct:   118 TDAGNIRVVY 127


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       91        91   0.00091  102 3  11 22  0.38    30
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  561 (60 KB)
  Total size of DFA:  127 KB (2081 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.71u 0.13s 8.84t   Elapsed:  00:00:01
  Total cpu time:  8.71u 0.13s 8.84t   Elapsed:  00:00:01
  Start:  Fri May 10 05:31:18 2013   End:  Fri May 10 05:31:19 2013

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