BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041264
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M0C2|EGC1_ARATH Putative EG45-like domain containing protein 1 OS=Arabidopsis
thaliana GN=EGC1 PE=3 SV=1
Length = 123
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Query: 7 AAGDALWNNGAVWGKMLRHKCTEARNAAPHPWTGNNVNVKIVDHC-SGCPSTIDLSREAF 65
AA D LW+NG V GKM KC+ RNA PHP TG +V VKIVDHC SGC ST+DLSREAF
Sbjct: 47 AASDTLWDNGRVCGKMFTVKCSGPRNAVPHPCTGKSVKVKIVDHCPSGCASTLDLSREAF 106
Query: 66 TQIANPVSGIINIDYH 81
QIANPV+GIINIDY
Sbjct: 107 AQIANPVAGIINIDYF 122
>sp|Q9ZP41|EGC_CITJA EG45-like domain containing protein OS=Citrus jambhiri GN=CjBAp12
PE=1 SV=1
Length = 131
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 7 AAGDALWNNGAVWGKMLRHKCTEARN-AAPHPWTGNNVNVKIVDHC-SGCPSTIDLSREA 64
AA A+WNNGAV K R KCT A N PHP G +V VKIVD C +GC +TIDLS+EA
Sbjct: 53 AASYAIWNNGAVCNKSFRVKCTGATNQGTPHPCRGGSVLVKIVDLCPAGCQATIDLSQEA 112
Query: 65 FTQIANPVSGIINIDYH 81
F+QIANP +G I I+++
Sbjct: 113 FSQIANPDAGKIKIEFN 129
>sp|Q9ZV52|EGC2_ARATH EG45-like domain containing protein 2 OS=Arabidopsis thaliana
GN=EGC2 PE=2 SV=2
Length = 130
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 12 LWNNGAVWGKMLRHKCTEARNAAPHPWTGNNVNVKIVDHCSG-CPSTIDLSREAFTQIAN 70
LW NG G+ R +C A TG V+VK+VD C C ++LSR+AF IAN
Sbjct: 58 LWQNGRACGRRYRVRCIGATYNFDRACTGRTVDVKVVDFCREPCNGDLNLSRDAFRVIAN 117
Query: 71 PVSGIINIDY 80
+G I + Y
Sbjct: 118 TDAGNIRVVY 127
>sp|P73455|Y3177_SYNY3 Uncharacterized protein ssl3177 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=ssl3177 PE=4 SV=1
Length = 90
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 39 TGNNVNVKIVDHCSGCPSTIDLSREAFTQIANPVSGII 76
TG +V V + D C+ C +IDLSR AF QIANP G +
Sbjct: 49 TGKSVVVTVSDRCN-C--SIDLSRSAFQQIANPRKGRV 83
>sp|Q9M203|EXPB5_ARATH Expansin-B5 OS=Arabidopsis thaliana GN=EXPB5 PE=2 SV=2
Length = 264
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 2 RCDAEAAGDALWNNGAVWGKMLRHKCTEARNAAPHPW-TGNNVNVKIVDHCSGCPST--- 57
RC A G +L+ +G G R KC HP T + V I D C GC
Sbjct: 67 RCMVSAGGPSLFKDGKGCGACYRLKCD-------HPLCTKKPIKVMISDECPGCTKESVH 119
Query: 58 IDLSREAFTQIANPVSG 74
DLS +AF +A G
Sbjct: 120 FDLSGKAFGALAKRGKG 136
>sp|Q5W6Z9|EXB18_ORYSJ Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1
Length = 264
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 26 KCTEARNAAPHPWTGNNVNVKIVDHCSGCPST-----IDLSREAFTQIANP-------VS 73
C + + + +GN V V + D C G P DLS AF +ANP +
Sbjct: 89 SCYQVKCSGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAA 148
Query: 74 GIINIDYH 81
G++ I Y+
Sbjct: 149 GVLQIQYN 156
>sp|Q7XT40|EXB15_ORYSJ Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2
Length = 264
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 18/94 (19%)
Query: 1 PRCDAEAAGD-ALWNNGAVWGKMLRHKCTEARNAAPHPWTGNNVNVKIVDHCSGCPST-- 57
P AAG +++ +G G + KCT N+A +GN V V + D C G P
Sbjct: 68 PFSSMIAAGSPSIYKSGLGCGSCYQVKCTG--NSAC---SGNPVTVVLTDECPGGPCLSE 122
Query: 58 ---IDLSREAFTQIANP-------VSGIINIDYH 81
DLS AF +ANP +G++ I Y+
Sbjct: 123 PVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYN 156
>sp|Q7XT39|EXPB5_ORYSJ Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2
Length = 275
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 17/87 (19%)
Query: 7 AAGDALWNNGAVWGKMLRHKCTEARNAAPHPWTGNNVNVKIVDHCSGC-----PSTIDLS 61
A G +L+ NG G + KCT R + P V V I D C G + D+S
Sbjct: 83 AGGPSLFKNGKGCGSCYQIKCTGNRACSGRP-----VTVVITDSCPGGVCLNEAAHFDMS 137
Query: 62 REAFTQIAN-------PVSGIINIDYH 81
AF +AN +G++ I Y
Sbjct: 138 GTAFGAMANRGMGDRLRSAGVLKIQYK 164
>sp|Q9SHY6|EXPB2_ARATH Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=3 SV=2
Length = 273
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 7 AAGDALWNNGAVWGKMLRHKCTEARNAAPHPWTGNNVNVKIVDHCSGCPST---IDLSRE 63
A G +L+ +G G + KCT + +P V V I D C GC DLS
Sbjct: 85 AGGPSLFKSGKGCGACYQVKCTSKSACSKNP-----VTVVITDECPGCVKESVHFDLSGT 139
Query: 64 AFTQIA 69
AF +A
Sbjct: 140 AFGAMA 145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,872,971
Number of Sequences: 539616
Number of extensions: 1208654
Number of successful extensions: 2067
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2056
Number of HSP's gapped (non-prelim): 12
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)