Your job contains 1 sequence.
>041265
MRTIRQTCGLENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIV
EGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFS
REIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAML
PLKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPF
CAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVV
MKDIKLVLL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041265
(309 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2130374 - symbol:CLA1 "CLOROPLASTOS ALTERADOS ... 511 4.8e-92 3
TAIR|locus:2148047 - symbol:DXPS3 "1-deoxy-D-xylulose 5-p... 337 1.5e-58 3
TIGR_CMR|CHY_1985 - symbol:CHY_1985 "1-deoxy-D-xylulose-5... 362 7.2e-49 2
TAIR|locus:2089885 - symbol:DXPS1 "1-deoxy-D-xylulose 5-p... 493 4.2e-47 1
TIGR_CMR|GSU_0686 - symbol:GSU_0686 "deoxyxylulose-5-phos... 353 1.5e-45 2
TIGR_CMR|GSU_1764 - symbol:GSU_1764 "deoxyxylulose-5-phos... 353 8.9e-45 2
TIGR_CMR|DET_0745 - symbol:DET_0745 "1-deoxy-D-xylulose-5... 324 4.6e-44 2
TIGR_CMR|BA_4400 - symbol:BA_4400 "1-deoxyxylulose-5-phos... 334 8.9e-44 2
UNIPROTKB|P77488 - symbol:dxs "Dxs" species:83333 "Escher... 357 1.4e-43 2
TIGR_CMR|SO_1525 - symbol:SO_1525 "deoxyxylulose-5-phosph... 351 1.6e-43 2
TIGR_CMR|CPS_1088 - symbol:CPS_1088 "1-deoxy-D-xylulose-5... 340 1.2e-42 2
TIGR_CMR|CJE_0366 - symbol:CJE_0366 "1-deoxy-D-xylulose-5... 298 5.0e-42 3
UNIPROTKB|Q9KTL3 - symbol:dxs "1-deoxy-D-xylulose-5-phosp... 330 6.2e-41 2
TIGR_CMR|VC_0889 - symbol:VC_0889 "1-deoxyxylulose-5-phos... 330 6.2e-41 2
TIGR_CMR|SPO_0247 - symbol:SPO_0247 "1-deoxy-D-xylulose-5... 403 4.1e-37 1
UNIPROTKB|O50408 - symbol:dxs2 "1-deoxy-D-xylulose-5-phos... 268 3.8e-34 2
GENEDB_PFALCIPARUM|MAL13P1.186 - symbol:DOXP synthase "1-... 257 7.4e-33 3
UNIPROTKB|Q8IDW0 - symbol:MAL13P1.186 "1-deoxy-D-xylulose... 257 7.4e-33 3
UNIPROTKB|P0A554 - symbol:dxs "1-deoxy-D-xylulose-5-phosp... 284 2.1e-29 2
TIGR_CMR|GSU_2918 - symbol:GSU_2918 "transketolase, C-ter... 177 2.0e-11 1
UNIPROTKB|Q3AFP6 - symbol:CHY_0166 "Putative transketolas... 176 2.5e-11 1
TIGR_CMR|CHY_0166 - symbol:CHY_0166 "putative transketola... 176 2.5e-11 1
UNIPROTKB|Q48M55 - symbol:PSPPH_1255 "Transketolase, C-te... 147 8.9e-08 1
MGI|MGI:1921669 - symbol:Tktl2 "transketolase-like 2" spe... 139 2.2e-06 1
UNIPROTKB|F1PE28 - symbol:TKT "Uncharacterized protein" s... 129 4.9e-06 2
UNIPROTKB|A7E3W4 - symbol:TKT "Transketolase" species:991... 126 9.3e-06 2
UNIPROTKB|A7Z014 - symbol:TKT "TKT protein" species:9913 ... 126 1.0e-05 2
RGD|1304767 - symbol:Tktl2 "transketolase-like 2" species... 132 1.3e-05 1
UNIPROTKB|Q6B855 - symbol:TKT "Transketolase" species:991... 124 1.7e-05 2
UNIPROTKB|A8U4R4 - symbol:tkt "Uncharacterized protein" s... 123 1.8e-05 2
MGI|MGI:105992 - symbol:Tkt "transketolase" species:10090... 124 2.8e-05 2
RGD|621036 - symbol:Tkt "transketolase" species:10116 "Ra... 123 2.9e-05 2
UNIPROTKB|F1P1A5 - symbol:TKT "Uncharacterized protein" s... 123 3.7e-05 2
UNIPROTKB|B4E022 - symbol:TKT "Transketolase" species:960... 123 4.7e-05 2
UNIPROTKB|P29401 - symbol:TKT "Transketolase" species:960... 123 5.8e-05 2
UNIPROTKB|I3L954 - symbol:TKTL1 "Uncharacterized protein"... 123 0.00011 1
UNIPROTKB|Q2NL26 - symbol:TKTL1 "Transketolase-like prote... 121 0.00021 1
UNIPROTKB|Q2NKZ4 - symbol:TKTL2 "Transketolase-like prote... 121 0.00022 1
>TAIR|locus:2130374 [details] [associations]
symbol:CLA1 "CLOROPLASTOS ALTERADOS 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008661 "1-deoxy-D-xylulose-5-phosphate synthase activity"
evidence=IEA;IDA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016114 "terpenoid biosynthetic process" evidence=IEA]
[GO:0016624 "oxidoreductase activity, acting on the aldehyde or oxo
group of donors, disulfide as acceptor" evidence=IEA] [GO:0015995
"chlorophyll biosynthetic process" evidence=RCA;IMP] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA;TAS] [GO:0000096
"sulfur amino acid metabolic process" evidence=RCA] [GO:0006546
"glycine catabolic process" evidence=RCA] [GO:0006636 "unsaturated
fatty acid biosynthetic process" evidence=RCA] [GO:0006655
"phosphatidylglycerol biosynthetic process" evidence=RCA]
[GO:0006733 "oxidoreduction coenzyme metabolic process"
evidence=RCA] [GO:0006766 "vitamin metabolic process" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009416 "response to light stimulus"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0015994 "chlorophyll metabolic process" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
[GO:0019216 "regulation of lipid metabolic process" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
[GO:0019748 "secondary metabolic process" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031408 "oxylipin
biosynthetic process" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0044272 "sulfur compound
biosynthetic process" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0046777 "protein autophosphorylation" evidence=RCA]
UniPathway:UPA00064 InterPro:IPR005476 InterPro:IPR005477
InterPro:IPR009014 InterPro:IPR015941 Pfam:PF02780 Pfam:PF13292
Pfam:PF02779 InterPro:IPR005474 GO:GO:0009507 GO:GO:0009570
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0016114
GO:GO:0009228 EMBL:Z97339 Gene3D:3.40.50.920 InterPro:IPR005475
SMART:SM00861 SUPFAM:SSF52922 GO:GO:0015995 EMBL:AL161542
GO:GO:0019288 eggNOG:COG1154 KO:K01662 GO:GO:0008661 GO:GO:0052865
InterPro:IPR020826 TIGRFAMs:TIGR00204 PROSITE:PS00801
PROSITE:PS00802 EMBL:U27099 EMBL:Y14333 EMBL:BT002340
IPI:IPI00516684 PIR:H85171 PIR:T52289 RefSeq:NP_193291.1
UniGene:At.23240 ProteinModelPortal:Q38854 SMR:Q38854 STRING:Q38854
PaxDb:Q38854 PRIDE:Q38854 EnsemblPlants:AT4G15560.1 GeneID:827230
KEGG:ath:AT4G15560 TAIR:At4g15560 HOGENOM:HOG000012988
InParanoid:Q38854 OMA:GDIKPDM PhylomeDB:Q38854 ProtClustDB:PLN02582
BioCyc:ARA:AT4G15560-MONOMER BioCyc:MetaCyc:AT4G15560-MONOMER
Genevestigator:Q38854 GermOnline:AT4G15560 Uniprot:Q38854
Length = 717
Score = 511 (184.9 bits), Expect = 4.8e-92, Sum P(3) = 4.8e-92
Identities = 93/104 (89%), Positives = 98/104 (94%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
MGGGTGLNLFQ+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFCAIYSSF+QR +DQV H
Sbjct: 426 MGGGTGLNLFQRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVH 485
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DVDLQKLPVRFA+DRAGLVGADGPTHCGAFD TFMACLPNM+VM
Sbjct: 486 DVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMIVM 529
Score = 243 (90.6 bits), Expect = 4.8e-92, Sum P(3) = 4.8e-92
Identities = 50/103 (48%), Positives = 70/103 (67%)
Query: 77 GVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFF 132
G L+ AL RL SNP R+L + A K ++ GG MH+ +D ++R + +G+ + F
Sbjct: 265 GALSSALSRLQSNPALRELREVA---KGMTKQIGGPMHQLAAKVDEYARGMISGTGSSLF 321
Query: 133 EDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK 175
E+LGLYYIGPVDGHN++DL +LK+VK+ G VLIHV+TEK
Sbjct: 322 EELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEK 364
Score = 196 (74.1 bits), Expect = 4.8e-92, Sum P(3) = 4.8e-92
Identities = 51/99 (51%), Positives = 63/99 (63%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M T+RQT GL E+ HD FG GHSST+ISAGL GMAVGRDL GKNN
Sbjct: 161 MPTMRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGL----------GMAVGRDLKGKNN 210
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-ALKRLHSNPQ 91
+V++VI +GA A +YEA+NNAG L+ + L+ N Q
Sbjct: 211 NVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQ 249
>TAIR|locus:2148047 [details] [associations]
symbol:DXPS3 "1-deoxy-D-xylulose 5-phosphate synthase 3"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity"
evidence=IEA;ISS;TAS] [GO:0016114 "terpenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR005476 InterPro:IPR005477
InterPro:IPR009014 InterPro:IPR015941 Pfam:PF02780 Pfam:PF13292
Pfam:PF02779 GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016114 HSSP:Q8ZUR7 Gene3D:3.40.50.920 InterPro:IPR005475
SMART:SM00861 SUPFAM:SSF52922 EMBL:AL360314 KO:K01662 GO:GO:0008661
TIGRFAMs:TIGR00204 HOGENOM:HOG000012988 IPI:IPI00544156
RefSeq:NP_196699.1 UniGene:At.32264 ProteinModelPortal:Q9LFL9
SMR:Q9LFL9 STRING:Q9LFL9 PRIDE:Q9LFL9 EnsemblPlants:AT5G11380.1
GeneID:831009 KEGG:ath:AT5G11380 TAIR:At5g11380 InParanoid:Q9LFL9
OMA:DSNMIVI PhylomeDB:Q9LFL9 ProtClustDB:PLN02225
Genevestigator:Q9LFL9 Uniprot:Q9LFL9
Length = 700
Score = 337 (123.7 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
Identities = 63/95 (66%), Positives = 75/95 (78%)
Query: 207 FQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPV 266
FQ+ FP R F+VG+AEQHAVTF+AGL++ GLKPFC I S+FLQR +DQV HDVD Q+ V
Sbjct: 416 FQERFPDRFFNVGMAEQHAVTFSAGLSSGGLKPFCIIPSAFLQRAYDQVVHDVDRQRKAV 475
Query: 267 RFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
RF I AGLVG+DGP CGAFD FM+ LPNM+ M
Sbjct: 476 RFVITSAGLVGSDGPVQCGAFDIAFMSSLPNMIAM 510
Score = 186 (70.5 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
Identities = 40/100 (40%), Positives = 63/100 (63%)
Query: 79 LNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE----IDAFSREIEAGSRACFFED 134
L+ + ++ S+ FR+ + A K ++ G M+E +D ++R + + + FE+
Sbjct: 267 LSSIMSKIQSSKVFRKFRELA---KAMTKRIGKGMYEWAAKVDEYARGMVGPTGSTLFEE 323
Query: 135 LGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITE 174
LGLYYIGPVDGHN+EDL VL++V ++ G VL+HVITE
Sbjct: 324 LGLYYIGPVDGHNIEDLVCVLREVSSLDSMGPVLVHVITE 363
Score = 132 (51.5 bits), Expect = 1.5e-58, Sum P(3) = 1.5e-58
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 7 TCGLENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATI- 65
T LE+ +D+FG GH SISAGL G+AV RD+ GK + V++VI + TI
Sbjct: 175 TSRLESEYDSFGTGHGCNSISAGL----------GLAVARDMKGKRDRVVAVI-DNVTIT 223
Query: 66 ARMSYEAINNAGVLN 80
A +YEA++NAG L+
Sbjct: 224 AGQAYEAMSNAGYLD 238
>TIGR_CMR|CHY_1985 [details] [associations]
symbol:CHY_1985 "1-deoxy-D-xylulose-5-phosphate synthase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008299 "isoprenoid biosynthetic process" evidence=ISS]
[GO:0008615 "pyridoxine biosynthetic process" evidence=ISS]
[GO:0008661 "1-deoxy-D-xylulose-5-phosphate synthase activity"
evidence=ISS] [GO:0009228 "thiamine biosynthetic process"
evidence=ISS] UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016114
GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 eggNOG:COG1154 HOGENOM:HOG000012987 KO:K01662
GO:GO:0008661 GO:GO:0052865 InterPro:IPR020826 TIGRFAMs:TIGR00204
PROSITE:PS00801 PROSITE:PS00802 RefSeq:YP_360804.1 STRING:Q3AAN0
GeneID:3728203 KEGG:chy:CHY_1985 PATRIC:21277057 OMA:HGAFDIS
BioCyc:CHYD246194:GJCN-1984-MONOMER Uniprot:Q3AAN0
Length = 622
Score = 362 (132.5 bits), Expect = 7.2e-49, Sum P(2) = 7.2e-49
Identities = 70/120 (58%), Positives = 88/120 (73%)
Query: 182 LKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFC 241
++L Q R + M GTGLN F +++P R +DVGIAEQHAVT AAG+A EGLKP
Sbjct: 326 VELAQDRPEVVAITAAMPTGTGLNYFAQNYPERFYDVGIAEQHAVTMAAGMACEGLKPVV 385
Query: 242 AIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
AIYS+FLQR FDQ+ HDV LQ LPV FA+DRAG+VG DGPTH G FD +++ +PN+ +M
Sbjct: 386 AIYSTFLQRSFDQIIHDVCLQNLPVVFAVDRAGIVGEDGPTHHGIFDLSYLRMIPNLTIM 445
Score = 176 (67.0 bits), Expect = 7.2e-49, Sum P(2) = 7.2e-49
Identities = 60/184 (32%), Positives = 92/184 (50%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRI----NYFRYVGMAVGRD--LLGKN-----NHVISVI 59
E+ +DAFGVGHSSTSISA L + +Y +AV D L G NH +
Sbjct: 106 ESPYDAFGVGHSSTSISAALGMALARDLKGEQYEVVAVIGDGALTGGMAFEALNHAGHLQ 165
Query: 60 VEGATIARMSYEAI-NNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI-- 116
+ + + +I N G L+ L R+ ++P++ + E + K G M +I
Sbjct: 166 KKLIVVVNDNEMSIAQNVGALSAYLSRIRTDPKYSRGKDELEALIKKIPHIGPTMVKIGE 225
Query: 117 ---DAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVIT 173
D+F + G FE+LG Y+GP+DGHN++++ V + K P V++HVIT
Sbjct: 226 RLKDSFKYLLVPGM---LFEELGFTYLGPIDGHNIKEMIEVFSRAKTFAGP--VVVHVIT 280
Query: 174 EKEK 177
+K K
Sbjct: 281 KKGK 284
>TAIR|locus:2089885 [details] [associations]
symbol:DXPS1 "1-deoxy-D-xylulose 5-phosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0008661 "1-deoxy-D-xylulose-5-phosphate
synthase activity" evidence=IEA;ISS;TAS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016114 "terpenoid biosynthetic process"
evidence=ISS] [GO:0016624 "oxidoreductase activity, acting on the
aldehyde or oxo group of donors, disulfide as acceptor"
evidence=IEA] [GO:0007568 "aging" evidence=RCA] HAMAP:MF_00315
InterPro:IPR005476 InterPro:IPR005477 InterPro:IPR009014
InterPro:IPR015941 Pfam:PF02780 Pfam:PF13292 Pfam:PF02779
InterPro:IPR005474 EMBL:CP002686 GO:GO:0046872 GO:GO:0016114
GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 KO:K01662 OMA:PVAYHGP GO:GO:0008661 GO:GO:0052865
InterPro:IPR020826 PROSITE:PS00801 PROSITE:PS00802 UniGene:At.27992
IPI:IPI00534399 RefSeq:NP_850620.2 ProteinModelPortal:F4IXL8
SMR:F4IXL8 EnsemblPlants:AT3G21500.2 GeneID:821704
KEGG:ath:AT3G21500 Uniprot:F4IXL8
Length = 641
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 90/104 (86%), Positives = 95/104 (91%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
MGGGT LNLF+ FP RCFDVGIAEQHAVTFAAGLA EGLKPFC IYSSF+QR +DQV H
Sbjct: 384 MGGGTMLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVH 443
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DVDLQKLPVRFAIDRAGL+GADGPTHCGAFD TFMACLPNM+VM
Sbjct: 444 DVDLQKLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVM 487
Score = 318 (117.0 bits), Expect = 9.3e-28, P = 9.3e-28
Identities = 97/265 (36%), Positives = 134/265 (50%)
Query: 1 MRTIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNN 53
M+TIRQT GL E+ HD+FG GHSST++SAGL GMAVGRDL G NN
Sbjct: 151 MKTIRQTNGLSGYTKRRESEHDSFGTGHSSTTLSAGL----------GMAVGRDLKGMNN 200
Query: 54 HVISVIVEGATIARMSYEAINNAGVLNK-ALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
V+SVI +GA A +YEA+NNAG L+ + L+ N Q
Sbjct: 201 SVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQPVGALSCA 260
Query: 113 MHEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVI 172
+ + + I S + FE+LG +Y+GPVDGHN++DL +L+ +K+ G VLIHV+
Sbjct: 261 LSRLQSNCGMIRETS-STLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVV 319
Query: 173 TEKEKAMLPLKLQQTRLFCKILD-NRMGGGTGLNLFQKHFPIRCF-DVGIAEQHAVTFAA 230
TEK + P + + +L + G N+ + CF + IAE A
Sbjct: 320 TEKGRGY-PYAERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIV 378
Query: 231 GL-AAEGLKPFCAIYSS-FLQRCFD 253
+ AA G ++ S F RCFD
Sbjct: 379 AIHAAMGGGTMLNLFESRFPTRCFD 403
>TIGR_CMR|GSU_0686 [details] [associations]
symbol:GSU_0686 "deoxyxylulose-5-phosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0008615
"pyridoxine biosynthetic process" evidence=ISS] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=ISS]
[GO:0009228 "thiamine biosynthetic process" evidence=ISS]
UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
GO:GO:0046872 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0016114
GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 RefSeq:NP_951743.1 ProteinModelPortal:Q74FC3
GeneID:2685342 KEGG:gsu:GSU0686 PATRIC:22024127 eggNOG:COG1154
HOGENOM:HOG000012987 KO:K01662 OMA:PVAYHGP ProtClustDB:PRK05444
BioCyc:GSUL243231:GH27-721-MONOMER GO:GO:0008661 GO:GO:0052865
InterPro:IPR020826 TIGRFAMs:TIGR00204 PROSITE:PS00801
PROSITE:PS00802 Uniprot:Q74FC3
Length = 637
Score = 353 (129.3 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 70/104 (67%), Positives = 79/104 (75%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
M GTGL F K FP R FDVGIAEQHAVTFAAGLAAEG +P AIYS+FLQR +DQV H
Sbjct: 344 MPDGTGLTGFAKEFPERFFDVGIAEQHAVTFAAGLAAEGFRPVTAIYSTFLQRAYDQVFH 403
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DV LQ LPV FA+DR G+VG DGPTH G FD +++ LP M +M
Sbjct: 404 DVCLQNLPVVFALDRGGVVGDDGPTHHGVFDLSYLRHLPGMTLM 447
Score = 155 (59.6 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 59/190 (31%), Positives = 81/190 (42%)
Query: 11 ENVHDAFGVGHSSTSISAGL--------RTRINYFRYV---GMAVGR---DLLGKNNHVI 56
E+ HDAF GHSSTSISAGL R N V G G + L + H+
Sbjct: 106 ESSHDAFDTGHSSTSISAGLGMAMARELRGGSNKVVAVIGDGSMTGGIAFEALNQAGHLK 165
Query: 57 SVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEI 116
++ MS N G + + R + FR+L +E G +I
Sbjct: 166 KNLIVVLNDNEMSISP--NVGAFSSFVSRKLTGSYFRELKKEVQGLLQNIPAIG---KDI 220
Query: 117 DAFSREIEAGSRA-----CFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHV 171
F+R E + FE LG YIGP+ GHNL L V + + + P V++HV
Sbjct: 221 LQFARRAENSLKGFLTPGMLFEALGFDYIGPIQGHNLPQLLEVFENARGLDGP--VVVHV 278
Query: 172 ITEKEKAMLP 181
+T K K +P
Sbjct: 279 MTTKGKGYVP 288
>TIGR_CMR|GSU_1764 [details] [associations]
symbol:GSU_1764 "deoxyxylulose-5-phosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0008615
"pyridoxine biosynthetic process" evidence=ISS] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=ISS]
[GO:0009228 "thiamine biosynthetic process" evidence=ISS]
UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
GO:GO:0046872 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0016114
GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 eggNOG:COG1154 HOGENOM:HOG000012987 KO:K01662
ProtClustDB:PRK05444 GO:GO:0008661 GO:GO:0052865 InterPro:IPR020826
TIGRFAMs:TIGR00204 PROSITE:PS00801 PROSITE:PS00802
RefSeq:NP_952814.1 ProteinModelPortal:Q74CB0 GeneID:2686761
KEGG:gsu:GSU1764 PATRIC:22026371 OMA:MACADEA
BioCyc:GSUL243231:GH27-1759-MONOMER Uniprot:Q74CB0
Length = 626
Score = 353 (129.3 bits), Expect = 8.9e-45, Sum P(2) = 8.9e-45
Identities = 70/104 (67%), Positives = 79/104 (75%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
M GTGL F P R FDVGIAEQH VTFAAGLAAEG +P AIYSSFLQR +DQ+ H
Sbjct: 344 MPDGTGLGSFSARHPGRFFDVGIAEQHGVTFAAGLAAEGYRPVFAIYSSFLQRAYDQLFH 403
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DV L LPV FAIDR+G+VG+DGPTH G FD +++ LPNMVVM
Sbjct: 404 DVCLMNLPVTFAIDRSGVVGSDGPTHHGLFDLSYLRTLPNMVVM 447
Score = 147 (56.8 bits), Expect = 8.9e-45, Sum P(2) = 8.9e-45
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVISVIVEGATIARMSY 70
E+ HD F GH+STSISA L G+A RDL G+NN V++VI +G+ ++Y
Sbjct: 106 ESPHDVFDAGHASTSISAAL----------GLAAARDLAGRNNKVVAVIGDGSMTGGIAY 155
Query: 71 EAINNAGVLNKAL 83
E +N+AG LN+ L
Sbjct: 156 EGLNHAGHLNRDL 168
Score = 50 (22.7 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 34/126 (26%), Positives = 55/126 (43%)
Query: 120 SREIEAGSRACFFEDLGLYYIGP-VDGHN-LE----DLAYV-LKQVKAIPDPGAVLIHVI 172
S + AGS C +G +GP ++ N LE DL V ++ VK + D +L +V
Sbjct: 495 SEVLRAGSGTCVVLAVGAM-VGPALEAANTLEGEGIDLTVVNVRFVKPL-DRELILSYVG 552
Query: 173 TEKEKAMLPLKLQQTRLFCKILDNRMGGGTG-LNLFQKHFPIRCFDVGIAEQHAVTFAAG 231
+ + Q +L+ G G + + + +P R + G EQH + G
Sbjct: 553 RAGTLVTIEENVLQGGFGSAVLELLADEGVGGVAVHRFGYPDRYVEQG--EQHELRSRYG 610
Query: 232 LAAEGL 237
L AEG+
Sbjct: 611 LDAEGI 616
>TIGR_CMR|DET_0745 [details] [associations]
symbol:DET_0745 "1-deoxy-D-xylulose-5-phosphate synthase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0008615
"pyridoxine biosynthetic process" evidence=ISS] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=ISS]
[GO:0009228 "thiamine biosynthetic process" evidence=ISS]
UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
GO:GO:0046872 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0016114
GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 eggNOG:COG1154 KO:K01662 OMA:PVAYHGP
ProtClustDB:PRK05444 GO:GO:0008661 GO:GO:0052865 TIGRFAMs:TIGR00204
PROSITE:PS00801 PROSITE:PS00802 HOGENOM:HOG000012988
RefSeq:YP_181480.1 ProteinModelPortal:Q3Z8G9 STRING:Q3Z8G9
GeneID:3229946 KEGG:det:DET0745 PATRIC:21608553
BioCyc:DETH243164:GJNF-746-MONOMER Uniprot:Q3Z8G9
Length = 647
Score = 324 (119.1 bits), Expect = 4.6e-44, Sum P(2) = 4.6e-44
Identities = 64/103 (62%), Positives = 75/103 (72%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
M G GL+ FP R FDVGI EQHAVTFAAG+A +G P IYS+FLQR FDQ+ H
Sbjct: 353 MTDGCGLSEVAADFPDRVFDVGICEQHAVTFAAGMATQGYIPVVVIYSTFLQRSFDQIIH 412
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVV 300
DV LQKLPV FAIDR G+VG DG TH G FD +FM+ +P+M+V
Sbjct: 413 DVCLQKLPVVFAIDRGGIVGDDGKTHQGIFDLSFMSLIPDMIV 455
Score = 172 (65.6 bits), Expect = 4.6e-44, Sum P(2) = 4.6e-44
Identities = 59/188 (31%), Positives = 89/188 (47%)
Query: 7 TCGLENVHDAFGVGHSSTSISAGLRTRI-------NY--FRYVG---MAVGRDLLGKNN- 53
TC E+ HD FG GH+STSISAGL + +Y +G ++ G NN
Sbjct: 116 TCRDESPHDPFGAGHASTSISAGLGMAVARDLAKEDYSVISVIGDGAISGGMSFEAINNA 175
Query: 54 -HVISVIVEGATIARMSYEAIN-NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGG 111
H+ + + I + AI+ + G L+K L + +P+F + + FG
Sbjct: 176 GHLHTKFI---VILNDNGMAISPSTGALSKFLNNVRFDPRF-EFAKRGAKQTITNMPFGK 231
Query: 112 QMHEID-AFSREIEAGSR-ACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLI 169
+ + R+ E +E+LG Y+GPVDGHN+ +L LK K + VLI
Sbjct: 232 SVWAFTKSIKRKFEKSMLPGSLWEELGFIYLGPVDGHNIRELEAALKCAKDF-ESQPVLI 290
Query: 170 HVITEKEK 177
H+IT+K K
Sbjct: 291 HMITKKGK 298
>TIGR_CMR|BA_4400 [details] [associations]
symbol:BA_4400 "1-deoxyxylulose-5-phosphate synthase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0008615
"pyridoxine biosynthetic process" evidence=ISS] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=ISS]
[GO:0009228 "thiamine biosynthetic process" evidence=ISS]
UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016114 GO:GO:0009228
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
eggNOG:COG1154 HOGENOM:HOG000012987 KO:K01662 ProtClustDB:PRK05444
GO:GO:0008661 GO:GO:0052865 InterPro:IPR020826 TIGRFAMs:TIGR00204
PROSITE:PS00801 PROSITE:PS00802 RefSeq:NP_846629.1
RefSeq:YP_021044.1 RefSeq:YP_030331.1 ProteinModelPortal:Q81M54
DNASU:1087729 EnsemblBacteria:EBBACT00000011092
EnsemblBacteria:EBBACT00000016687 EnsemblBacteria:EBBACT00000023815
GeneID:1087729 GeneID:2819989 GeneID:2852469 KEGG:ban:BA_4400
KEGG:bar:GBAA_4400 KEGG:bat:BAS4081 OMA:IDIEMIN
BioCyc:BANT260799:GJAJ-4138-MONOMER
BioCyc:BANT261594:GJ7F-4281-MONOMER Uniprot:Q81M54
Length = 630
Score = 334 (122.6 bits), Expect = 8.9e-44, Sum P(2) = 8.9e-44
Identities = 69/120 (57%), Positives = 82/120 (68%)
Query: 182 LKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFC 241
LKL +T + M G+ L FQK FP R DVGIAEQHA T AAG+A +G+KPF
Sbjct: 327 LKLARTDERIVAITPAMPVGSKLEKFQKEFPDRMIDVGIAEQHATTMAAGMATQGMKPFL 386
Query: 242 AIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
AIYS+FLQR +DQV HD+ Q L V IDR+GLVGADG TH G FD +F+ LPNMV+M
Sbjct: 387 AIYSTFLQRAYDQVVHDICRQNLNVFIGIDRSGLVGADGETHQGVFDISFLRHLPNMVIM 446
Score = 158 (60.7 bits), Expect = 8.9e-44, Sum P(2) = 8.9e-44
Identities = 60/188 (31%), Positives = 85/188 (45%)
Query: 11 ENVHDAFGVGHSSTSISAGL-----RTRINYFRYV------GMAVGRDLLGKNNHVISVI 59
E+ HD + GHSSTS+SA + R YV G G L NH+
Sbjct: 104 ESEHDVWETGHSSTSLSAAMGMALARDLKKTKEYVIPIIGDGALTGGMALEALNHIGHEK 163
Query: 60 VEGATIARMSYEAIN-NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQM----H 114
+ I + +I N G L+ L RL + ++ + E K GG++
Sbjct: 164 TDMIVILNDNEMSIAPNVGALHNVLGRLRTAGKYHWVKDELEYILKKIPAVGGKVAATAE 223
Query: 115 EI-DAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVIT 173
+I D+ + +G FFE+LG Y+GPVDGH+ E L L+ K P VL+HVIT
Sbjct: 224 KIKDSLKYLLVSG---VFFEELGFTYLGPVDGHDYEKLFETLQYAKKTKGP--VLVHVIT 278
Query: 174 EKEKAMLP 181
+K K P
Sbjct: 279 KKGKGYKP 286
>UNIPROTKB|P77488 [details] [associations]
symbol:dxs "Dxs" species:83333 "Escherichia coli K-12"
[GO:0016114 "terpenoid biosynthetic process" evidence=IEA]
[GO:0052865 "1-deoxy-D-xylulose 5-phosphate biosynthetic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0030976 "thiamine
pyrophosphate binding" evidence=IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity"
evidence=IEA;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008615 "pyridoxine biosynthetic process"
evidence=IDA] [GO:0009228 "thiamine biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00064 HAMAP:MF_00315
InterPro:IPR005476 InterPro:IPR005477 InterPro:IPR009014
InterPro:IPR015941 Pfam:PF02780 Pfam:PF13292 Pfam:PF02779
InterPro:IPR005474 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0006744 EMBL:U82664 GO:GO:0016114 GO:GO:0009228 GO:GO:0030976
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
eggNOG:COG1154 KO:K01662 ProtClustDB:PRK05444 GO:GO:0008661
GO:GO:0052865 InterPro:IPR020826 TIGRFAMs:TIGR00204 PROSITE:PS00801
PROSITE:PS00802 HOGENOM:HOG000012988 OMA:GDIKPDM EMBL:AF035440
PIR:D64771 RefSeq:NP_414954.1 RefSeq:YP_488712.1 PDB:2O1S
PDBsum:2O1S ProteinModelPortal:P77488 SMR:P77488 DIP:DIP-9485N
IntAct:P77488 MINT:MINT-1233858 PRIDE:P77488
EnsemblBacteria:EBESCT00000004332 EnsemblBacteria:EBESCT00000015309
GeneID:12930598 GeneID:945060 KEGG:ecj:Y75_p0408 KEGG:eco:b0420
PATRIC:32115989 EchoBASE:EB3378 EcoGene:EG13612
BioCyc:EcoCyc:DXS-MONOMER BioCyc:ECOL316407:JW0410-MONOMER
BioCyc:MetaCyc:DXS-MONOMER EvolutionaryTrace:P77488
Genevestigator:P77488 GO:GO:0008615 Uniprot:P77488
Length = 620
Score = 357 (130.7 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 69/104 (66%), Positives = 81/104 (77%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
M G+G+ F + FP R FDV IAEQHAVTFAAGLA G KP AIYS+FLQR +DQV H
Sbjct: 346 MREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQRAYDQVLH 405
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DV +QKLPV FAIDRAG+VGADG TH GAFD +++ C+P MV+M
Sbjct: 406 DVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIM 449
Score = 131 (51.2 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 53/187 (28%), Positives = 82/187 (43%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRI-----NYFRYVGMAVGRDLLGKN------NHVISVI 59
E+ +D VGHSSTSISAG+ + R +G + NH +
Sbjct: 112 ESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMAFEAMNHAGDIR 171
Query: 60 VEGATIARMSYEAIN-NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGG--QMHEI 116
+ I + +I+ N G LN L +L S + L + K+ F G + E+
Sbjct: 172 PDMLVILNDNEMSISENVGALNNHLAQLLSGKLYSSLREGG------KKVFSGVPPIKEL 225
Query: 117 DAFSREIEAGS--RACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITE 174
+ E G FE+LG YIGPVDGH++ L LK ++ + P +H++T+
Sbjct: 226 LKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQ--FLHIMTK 283
Query: 175 KEKAMLP 181
K + P
Sbjct: 284 KGRGYEP 290
Score = 128 (50.1 bits), Expect = 2.9e-43, Sum P(2) = 2.9e-43
Identities = 36/82 (43%), Positives = 47/82 (57%)
Query: 3 TIRQTCGL-------ENVHDAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHV 55
TIRQ GL E+ +D VGHSSTSISAG +G+AV + GKN
Sbjct: 97 TIRQKGGLHPFPWRGESEYDVLSVGHSSTSISAG----------IGIAVAAEKEGKNRRT 146
Query: 56 ISVIVEGATIARMSYEAINNAG 77
+ VI +GA A M++EA+N+AG
Sbjct: 147 VCVIGDGAITAGMAFEAMNHAG 168
>TIGR_CMR|SO_1525 [details] [associations]
symbol:SO_1525 "deoxyxylulose-5-phosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008615 "pyridoxine
biosynthetic process" evidence=ISS] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=ISS]
[GO:0009228 "thiamine biosynthetic process" evidence=ISS]
UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
GO:GO:0046872 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0016114
GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 eggNOG:COG1154 KO:K01662 ProtClustDB:PRK05444
GO:GO:0008661 GO:GO:0052865 InterPro:IPR020826 TIGRFAMs:TIGR00204
PROSITE:PS00801 PROSITE:PS00802 HOGENOM:HOG000012988 OMA:GDIKPDM
RefSeq:NP_717142.1 ProteinModelPortal:Q8EGR9 SMR:Q8EGR9
GeneID:1169334 KEGG:son:SO_1525 PATRIC:23522692 Uniprot:Q8EGR9
Length = 622
Score = 351 (128.6 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 67/104 (64%), Positives = 79/104 (75%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
M G+G+ F + FP + FD IAEQHAVT AG A EG KP AIYS+FLQR +DQ+ H
Sbjct: 346 MREGSGMVEFSQRFPKQYFDAAIAEQHAVTLGAGFACEGYKPVVAIYSTFLQRGYDQLIH 405
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DV LQ+LPV FAIDR G+VGADGPTH GAFD +FM C+PNMV+M
Sbjct: 406 DVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIM 449
Score = 137 (53.3 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 55/185 (29%), Positives = 86/185 (46%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRI-----NYFRYV------GMAVGRDLLGKNNHVISVI 59
E+ +D F VGHS TSISA L + R V G G + NH +
Sbjct: 112 ESEYDTFSVGHSGTSISAALAMAVAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLH 171
Query: 60 VEGATIARMSYEAIN-NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDA 118
+ + + +I+ N G LN L +L S +F +E SSK K K + E+
Sbjct: 172 NDMLMVLNDNEMSISENVGALNNHLAQLMSG-RFYTTIRE--SSK-KVLKGMPVIKEMAK 227
Query: 119 FSREIEAGS--RACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKE 176
+ E G FE+LG YIGP+DGH+++ L L+ ++ + P ++H++T+K
Sbjct: 228 RTEEHLKGMVVPGTLFEELGFNYIGPIDGHDVDALVETLRNMRNLKGPQ--VLHIMTKKG 285
Query: 177 KAMLP 181
+ P
Sbjct: 286 RGYEP 290
>TIGR_CMR|CPS_1088 [details] [associations]
symbol:CPS_1088 "1-deoxy-D-xylulose-5-phosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0008615
"pyridoxine biosynthetic process" evidence=ISS] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=ISS]
[GO:0009228 "thiamine biosynthetic process" evidence=ISS]
UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
GO:GO:0046872 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016114
GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 eggNOG:COG1154 KO:K01662 ProtClustDB:PRK05444
GO:GO:0008661 GO:GO:0052865 InterPro:IPR020826 TIGRFAMs:TIGR00204
PROSITE:PS00801 PROSITE:PS00802 HOGENOM:HOG000012988 OMA:GDIKPDM
RefSeq:YP_267832.1 ProteinModelPortal:Q487D3 SMR:Q487D3
STRING:Q487D3 GeneID:3522683 KEGG:cps:CPS_1088 PATRIC:21465447
BioCyc:CPSY167879:GI48-1170-MONOMER Uniprot:Q487D3
Length = 630
Score = 340 (124.7 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 65/104 (62%), Positives = 79/104 (75%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
M G+G+ F + FP + +DV IAEQH+VT+AAGLA GLKP AIYSSFLQR +DQ H
Sbjct: 346 MAEGSGMVEFSQRFPDQYYDVAIAEQHSVTYAAGLAIGGLKPVVAIYSSFLQRGYDQFIH 405
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DV +Q LPV FAIDRAG+VGADG TH G FD +F+ C+PN V+M
Sbjct: 406 DVAIQNLPVMFAIDRAGIVGADGATHQGVFDLSFLRCIPNTVIM 449
Score = 141 (54.7 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 56/183 (30%), Positives = 81/183 (44%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRI-------NYFRYVGMAVGRDLLGKN----NHVISVI 59
E+ +D VGHSSTSISA L + N + G G NH +
Sbjct: 112 ESEYDTLSVGHSSTSISAALGLAVAAEKEAKNRKTVAVIGDGAMTAGMAFEALNHAGDIK 171
Query: 60 VEGATIARMSYEAIN-NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGG--QMHEI 116
+ I + +I+ N G LN L +L S F F KK G + E+
Sbjct: 172 KDMLIILNDNDMSISKNVGALNNHLAKLLSGSIFT-----GFRESSKKL-LGNIPPIKEL 225
Query: 117 DAFSREIEAGS--RACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITE 174
+ + E G + FFE+LG YIGP+DGH++E L +K ++ + P +HV+T
Sbjct: 226 ASRAEEHLKGMVVPSTFFEELGFNYIGPIDGHDVESLVTTIKNMRNLKGPQ--FLHVVTT 283
Query: 175 KEK 177
K K
Sbjct: 284 KGK 286
>TIGR_CMR|CJE_0366 [details] [associations]
symbol:CJE_0366 "1-deoxy-D-xylulose-5-phosphate synthase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0008615
"pyridoxine biosynthetic process" evidence=ISS] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=ISS]
[GO:0009228 "thiamine biosynthetic process" evidence=ISS]
UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
GO:GO:0046872 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0016114
GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 eggNOG:COG1154 KO:K01662 ProtClustDB:PRK05444
GO:GO:0008661 GO:GO:0052865 InterPro:IPR020826 TIGRFAMs:TIGR00204
PROSITE:PS00801 PROSITE:PS00802 HOGENOM:HOG000012988
RefSeq:YP_178385.1 ProteinModelPortal:Q5HWF0 STRING:Q5HWF0
GeneID:3231128 KEGG:cjr:CJE0366 PATRIC:20042436 OMA:EINSKAC
BioCyc:CJEJ195099:GJC0-371-MONOMER Uniprot:Q5HWF0
Length = 615
Score = 298 (110.0 bits), Expect = 5.0e-42, Sum P(3) = 5.0e-42
Identities = 59/104 (56%), Positives = 73/104 (70%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
M GTGL+ + +P R +DV IAEQHAVT A +A EG KPF AIYS+FLQR +DQV H
Sbjct: 336 MPSGTGLDKLIEKYPNRFWDVAIAEQHAVTSMAAMAKEGFKPFIAIYSTFLQRAYDQVIH 395
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
D + L V FA+DRAG+VG DG TH G FD +F+A LPN ++
Sbjct: 396 DCAIMNLNVVFAMDRAGIVGEDGETHQGVFDLSFLAPLPNFTLL 439
Score = 118 (46.6 bits), Expect = 5.0e-42, Sum P(3) = 5.0e-42
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 132 FEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEK 177
FE+LGL YIGP+DGHNL ++ LKQ KA+ P +IH T K K
Sbjct: 233 FEELGLEYIGPIDGHNLGEIISALKQAKAMQKP--CVIHAQTIKGK 276
Score = 79 (32.9 bits), Expect = 5.0e-42, Sum P(3) = 5.0e-42
Identities = 29/80 (36%), Positives = 37/80 (46%)
Query: 3 TIRQTCGLENVH-----DAFGVGHSSTSISAGLRTRINYFRYVGMAVGRDLLGKNNHVIS 57
T+RQ GL D F GHSSTSIS VG L G+ ++
Sbjct: 89 TLRQINGLSGYTKPSEGDYFVAGHSSTSISLA----------VGACKAIALKGEKRIPVA 138
Query: 58 VIVEGATIARMSYEAINNAG 77
+I +GA A M+YEA+N G
Sbjct: 139 LIGDGALSAGMAYEALNELG 158
>UNIPROTKB|Q9KTL3 [details] [associations]
symbol:dxs "1-deoxy-D-xylulose-5-phosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008299 "isoprenoid biosynthetic process" evidence=ISS]
[GO:0008615 "pyridoxine biosynthetic process" evidence=ISS]
[GO:0008661 "1-deoxy-D-xylulose-5-phosphate synthase activity"
evidence=ISS] [GO:0009228 "thiamine biosynthetic process"
evidence=ISS] UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0016114
GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 GO:GO:0008299 eggNOG:COG1154 KO:K01662
ProtClustDB:PRK05444 GO:GO:0008661 GO:GO:0052865 InterPro:IPR020826
TIGRFAMs:TIGR00204 PROSITE:PS00801 PROSITE:PS00802 OMA:GDIKPDM
GO:GO:0008615 PIR:H82266 RefSeq:NP_230536.1
ProteinModelPortal:Q9KTL3 SMR:Q9KTL3 DNASU:2614118 GeneID:2614118
KEGG:vch:VC0889 PATRIC:20080876 Uniprot:Q9KTL3
Length = 626
Score = 330 (121.2 bits), Expect = 6.2e-41, Sum P(2) = 6.2e-41
Identities = 62/104 (59%), Positives = 77/104 (74%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
M G+G+ F K +P + FDV IAEQHAVT A G+A G P AIYS+FLQR +DQ+ H
Sbjct: 346 MREGSGMVRFSKEYPSQYFDVAIAEQHAVTLATGMAIAGYHPIVAIYSTFLQRGYDQLIH 405
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DV + LPV FAIDRAG+VGADG TH GAFD ++M C+PNM++M
Sbjct: 406 DVAIMNLPVMFAIDRAGIVGADGQTHQGAFDLSYMRCIPNMLIM 449
Score = 135 (52.6 bits), Expect = 6.2e-41, Sum P(2) = 6.2e-41
Identities = 56/186 (30%), Positives = 83/186 (44%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRI-----NYFRYVGMAVGRDLLGKN------NHVISVI 59
E+ +D VGHSSTSISA L I R V +G + NH V
Sbjct: 112 ESEYDTLSVGHSSTSISAALGMAICAGKEGKDRKVVSVIGDGAITAGMAFEAMNHAGDVH 171
Query: 60 VEGATIARMSYEAIN-NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFG-GQMHEID 117
+ + + +I+ N G LN L ++ S + + +E KK G + E+
Sbjct: 172 PDMLVVLNDNEMSISENVGALNNHLAQVLSGSLYTSI-REG----GKKVLSGIPPIKELV 226
Query: 118 AFSREIEAGS--RACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK 175
+ E G FE+LG YIGPVDGH++ +L LK ++ + P +HV+T+K
Sbjct: 227 RRTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVLELIKTLKNMRELKGPQ--FLHVMTKK 284
Query: 176 EKAMLP 181
K P
Sbjct: 285 GKGYAP 290
>TIGR_CMR|VC_0889 [details] [associations]
symbol:VC_0889 "1-deoxyxylulose-5-phosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] [GO:0008615
"pyridoxine biosynthetic process" evidence=ISS] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=ISS]
[GO:0009228 "thiamine biosynthetic process" evidence=ISS]
UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0016114
GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 GO:GO:0008299 eggNOG:COG1154 KO:K01662
ProtClustDB:PRK05444 GO:GO:0008661 GO:GO:0052865 InterPro:IPR020826
TIGRFAMs:TIGR00204 PROSITE:PS00801 PROSITE:PS00802 OMA:GDIKPDM
GO:GO:0008615 PIR:H82266 RefSeq:NP_230536.1
ProteinModelPortal:Q9KTL3 SMR:Q9KTL3 DNASU:2614118 GeneID:2614118
KEGG:vch:VC0889 PATRIC:20080876 Uniprot:Q9KTL3
Length = 626
Score = 330 (121.2 bits), Expect = 6.2e-41, Sum P(2) = 6.2e-41
Identities = 62/104 (59%), Positives = 77/104 (74%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
M G+G+ F K +P + FDV IAEQHAVT A G+A G P AIYS+FLQR +DQ+ H
Sbjct: 346 MREGSGMVRFSKEYPSQYFDVAIAEQHAVTLATGMAIAGYHPIVAIYSTFLQRGYDQLIH 405
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DV + LPV FAIDRAG+VGADG TH GAFD ++M C+PNM++M
Sbjct: 406 DVAIMNLPVMFAIDRAGIVGADGQTHQGAFDLSYMRCIPNMLIM 449
Score = 135 (52.6 bits), Expect = 6.2e-41, Sum P(2) = 6.2e-41
Identities = 56/186 (30%), Positives = 83/186 (44%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRI-----NYFRYVGMAVGRDLLGKN------NHVISVI 59
E+ +D VGHSSTSISA L I R V +G + NH V
Sbjct: 112 ESEYDTLSVGHSSTSISAALGMAICAGKEGKDRKVVSVIGDGAITAGMAFEAMNHAGDVH 171
Query: 60 VEGATIARMSYEAIN-NAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFG-GQMHEID 117
+ + + +I+ N G LN L ++ S + + +E KK G + E+
Sbjct: 172 PDMLVVLNDNEMSISENVGALNNHLAQVLSGSLYTSI-REG----GKKVLSGIPPIKELV 226
Query: 118 AFSREIEAGS--RACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEK 175
+ E G FE+LG YIGPVDGH++ +L LK ++ + P +HV+T+K
Sbjct: 227 RRTEEHLKGMVVPGTLFEELGFNYIGPVDGHDVLELIKTLKNMRELKGPQ--FLHVMTKK 284
Query: 176 EKAMLP 181
K P
Sbjct: 285 GKGYAP 290
>TIGR_CMR|SPO_0247 [details] [associations]
symbol:SPO_0247 "1-deoxy-D-xylulose-5-phosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008615 "pyridoxine
biosynthetic process" evidence=ISS] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=ISS]
[GO:0009228 "thiamine biosynthetic process" evidence=ISS]
[GO:0009240 "isopentenyl diphosphate biosynthetic process"
evidence=ISS] UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0016114
GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 eggNOG:COG1154 KO:K01662 ProtClustDB:PRK05444
GO:GO:0008661 GO:GO:0052865 InterPro:IPR020826 TIGRFAMs:TIGR00204
PROSITE:PS00801 PROSITE:PS00802 HOGENOM:HOG000012988 OMA:GDIKPDM
RefSeq:YP_165511.1 ProteinModelPortal:Q5LX42 GeneID:3196253
KEGG:sil:SPO0247 PATRIC:23373745 Uniprot:Q5LX42
Length = 642
Score = 403 (146.9 bits), Expect = 4.1e-37, P = 4.1e-37
Identities = 76/104 (73%), Positives = 87/104 (83%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
M GTGLNLF + +P RCFDVGIAEQH VTF+A LAA GLKPFCA+YS+FLQR +DQV H
Sbjct: 351 MPDGTGLNLFAERYPSRCFDVGIAEQHGVTFSAALAAGGLKPFCAMYSTFLQRGYDQVVH 410
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DV +Q+LPVRFAIDRAGLVGADG TH G+FD ++A LP MVVM
Sbjct: 411 DVAIQRLPVRFAIDRAGLVGADGATHAGSFDIAYLANLPGMVVM 454
Score = 155 (59.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 73/269 (27%), Positives = 110/269 (40%)
Query: 11 ENVHDAFGVGHSSTSISAGLRTRI-------------NYFRYVG---MAVGRDLLGKNN- 53
E+ +D FG HSSTSISA L + + +G M+ G NN
Sbjct: 111 ESPYDPFGAAHSSTSISAALGFAVARDLGGVTPEGLGDAIAVIGDGSMSAGMAFEAMNNA 170
Query: 54 -HVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQ 112
H+ ++ MS G L+ L RL++ F++L +A ++K
Sbjct: 171 GHLKKRLIVILNDNEMSIAP--PVGALSNYLSRLYAEEPFQEL--KA-AAKGAVSLLPEP 225
Query: 113 MHEIDAFSREIEAGSRA--CFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIH 170
E ++E+ G FE+LG YIGP+DGH++ L VL+ VKA G +L+H
Sbjct: 226 FREGAKRAKEMLKGMAVGGTLFEELGFSYIGPIDGHDMGQLLPVLRTVKARAT-GPILLH 284
Query: 171 VITEKEKAMLPLKLQQTR-----LFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHA 225
V+T+K K P + + R F + + + + F D +
Sbjct: 285 VLTKKGKGYAPAERARDRGHATAKFDVVTGEQKKAPSNAPSYTAVFGKALVDQAARDDKI 344
Query: 226 VTFAAGLA-AEGLKPFCAIYSSFLQRCFD 253
V A + GL F Y S RCFD
Sbjct: 345 VAVTAAMPDGTGLNLFAERYPS---RCFD 370
>UNIPROTKB|O50408 [details] [associations]
symbol:dxs2 "1-deoxy-D-xylulose-5-phosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
UniPathway:UPA00064 InterPro:IPR005476 InterPro:IPR005477
InterPro:IPR009014 InterPro:IPR015941 Pfam:PF02780 Pfam:PF13292
Pfam:PF02779 GO:GO:0005829 GO:GO:0005886 GenomeReviews:AL123456_GR
GO:GO:0046872 EMBL:BX842582 GO:GO:0016114 GO:GO:0009228
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
KO:K01662 GO:GO:0008661 GO:GO:0052865 InterPro:IPR020826
PROSITE:PS00802 OMA:MACADEA HOGENOM:HOG000012986 EMBL:CP003248
PIR:B70973 RefSeq:NP_217896.1 RefSeq:YP_006516862.1
ProteinModelPortal:O50408 SMR:O50408
EnsemblBacteria:EBMYCT00000000277 GeneID:13316980 GeneID:888080
KEGG:mtu:Rv3379c KEGG:mtv:RVBD_3379c PATRIC:18156128
TubercuList:Rv3379c Uniprot:O50408
Length = 536
Score = 268 (99.4 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 49/99 (49%), Positives = 64/99 (64%)
Query: 202 TGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAHDVDL 261
TGL + +P R FD GIAEQH + AAGLAA G P A+YS+FL R FDQ+ D+ L
Sbjct: 243 TGLGALSRRYPHRVFDSGIAEQHLLASAAGLAAAGTHPVVAVYSTFLHRAFDQLLFDIGL 302
Query: 262 QKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVV 300
+LPV +DRAG+ G DGP+H G +D +AC+P +
Sbjct: 303 HRLPVTLVLDRAGVTGPDGPSHHGLWDLALLACVPGFQI 341
Score = 132 (51.5 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 46/164 (28%), Positives = 74/164 (45%)
Query: 41 GMAVGRDLLGK-NNHVISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEA 99
G+A L G+ + VI+VI +GA +++E +NN G + P L
Sbjct: 58 GIAKALALQGQCDRRVIAVIGDGALTGGVAWEGLNNLGAATR--------PVIVVL---- 105
Query: 100 FSSKDKKQKFGGQMHEIDAFSREIEAGS-RAC-FFEDLGLYYIGPVDGHNLEDLAYVLKQ 157
D + + + A E+ G+ R FE++G YIGPVDGHN+ D VL++
Sbjct: 106 ---NDNGRSYDPTAGALAAHLEELRVGTPRGPNLFENMGFTYIGPVDGHNIPDTCAVLRK 162
Query: 158 VKAIPDPGAVLIHVITEKEKAMLPLKLQQTRLF--CKILDNRMG 199
A P V++H +T K + P + + C ++D G
Sbjct: 163 AAAAARP--VVVHAVTSKGRGYPPAEADERDHMHACGVVDIATG 204
>GENEDB_PFALCIPARUM|MAL13P1.186 [details] [associations]
symbol:DOXP synthase "1-deoxy-D-xylulose
5-phosphate synthase" species:5833 "Plasmodium falciparum"
[GO:0020011 "apicoplast" evidence=IDA] InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 GO:GO:0016114
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
EMBL:AL844509 GO:GO:0020011 KO:K01662 GO:GO:0008661
InterPro:IPR020826 PROSITE:PS00802 RefSeq:XP_001350100.1
ProteinModelPortal:Q8IDW0 IntAct:Q8IDW0 MINT:MINT-1630278
EnsemblProtists:MAL13P1.186:mRNA GeneID:813741 KEGG:pfa:MAL13P1.186
EuPathDB:PlasmoDB:PF3D7_1337200 HOGENOM:HOG000283293
ProtClustDB:CLSZ2432096 Uniprot:Q8IDW0
Length = 1205
Score = 257 (95.5 bits), Expect = 7.4e-33, Sum P(3) = 7.4e-33
Identities = 51/109 (46%), Positives = 73/109 (66%)
Query: 194 LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA-EGLKPFCAIYSSFLQRCF 252
L M GG+GL + +P +DVGIAEQH+VTFAA +A + LK IYS+FLQR +
Sbjct: 851 LSPAMLGGSGLVKISERYPNNVYDVGIAEQHSVTFAAAMAMNKKLKIQLCIYSTFLQRAY 910
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQ+ HD++LQ +P++ I R+GLVG DG TH G +D +++ L N ++
Sbjct: 911 DQIIHDLNLQNIPLKVIIGRSGLVGEDGATHQGIYDLSYLGTLNNAYII 959
Score = 98 (39.6 bits), Expect = 7.4e-33, Sum P(3) = 7.4e-33
Identities = 38/138 (27%), Positives = 60/138 (43%)
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE 115
I++I +G M+ EA+N LN + ++++ L A S + G
Sbjct: 623 IAIIGDGGLTGGMALEALNYISFLNSKILIIYNDNGQVSLPTNAVSISGNRP-IGSISDH 681
Query: 116 IDAFSREIEAG------SRAC----FFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPG 165
+ F IEA S+ FE+L YIG V+G+N E+L VL +K
Sbjct: 682 LHYFVSNIEANAGDNKLSKNAKENNIFENLNYDYIGVVNGNNTEELFKVLNNIKENKLKR 741
Query: 166 AVLIHVITEKEKAMLPLK 183
A ++HV T+K + K
Sbjct: 742 ATVLHVRTKKSNDFINSK 759
Score = 69 (29.3 bits), Expect = 7.4e-33, Sum P(3) = 7.4e-33
Identities = 12/18 (66%), Positives = 16/18 (88%)
Query: 11 ENVHDAFGVGHSSTSISA 28
E+++D FG GHSSTS+SA
Sbjct: 521 ESIYDKFGAGHSSTSLSA 538
Score = 41 (19.5 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 26/125 (20%), Positives = 56/125 (44%)
Query: 81 KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSR-EIEAGSRACFFEDLGLYY 139
K + L+ + + + S+D K+ + +ID ++ E E + F + G+Y
Sbjct: 339 KEIYELYVERNIPEYYERKYFSEDIKKSV---LFDIDKYNDVEFEKAIKEEFINN-GVY- 393
Query: 140 IGPVDG-HNLEDLAYVLKQVKAIPDPGAVLIHV---ITEKEKAMLPLKLQQTRLFCKILD 195
I +D + ++ ++K++ P LI+ + + +K LPL + ++F +
Sbjct: 394 INNIDNTYYKKENILIMKKILHY-FPLLKLINNPSDLKKLKKQYLPLLAHELKIFLFFIV 452
Query: 196 NRMGG 200
N GG
Sbjct: 453 NITGG 457
>UNIPROTKB|Q8IDW0 [details] [associations]
symbol:MAL13P1.186 "1-deoxy-D-xylulose 5-phosphate
synthase" species:36329 "Plasmodium falciparum 3D7" [GO:0020011
"apicoplast" evidence=IDA] InterPro:IPR005476 InterPro:IPR005477
InterPro:IPR009014 InterPro:IPR015941 Pfam:PF02780 Pfam:PF13292
Pfam:PF02779 GO:GO:0016114 Gene3D:3.40.50.920 InterPro:IPR005475
SMART:SM00861 SUPFAM:SSF52922 EMBL:AL844509 GO:GO:0020011 KO:K01662
GO:GO:0008661 InterPro:IPR020826 PROSITE:PS00802
RefSeq:XP_001350100.1 ProteinModelPortal:Q8IDW0 IntAct:Q8IDW0
MINT:MINT-1630278 EnsemblProtists:MAL13P1.186:mRNA GeneID:813741
KEGG:pfa:MAL13P1.186 EuPathDB:PlasmoDB:PF3D7_1337200
HOGENOM:HOG000283293 ProtClustDB:CLSZ2432096 Uniprot:Q8IDW0
Length = 1205
Score = 257 (95.5 bits), Expect = 7.4e-33, Sum P(3) = 7.4e-33
Identities = 51/109 (46%), Positives = 73/109 (66%)
Query: 194 LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA-EGLKPFCAIYSSFLQRCF 252
L M GG+GL + +P +DVGIAEQH+VTFAA +A + LK IYS+FLQR +
Sbjct: 851 LSPAMLGGSGLVKISERYPNNVYDVGIAEQHSVTFAAAMAMNKKLKIQLCIYSTFLQRAY 910
Query: 253 DQVAHDVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
DQ+ HD++LQ +P++ I R+GLVG DG TH G +D +++ L N ++
Sbjct: 911 DQIIHDLNLQNIPLKVIIGRSGLVGEDGATHQGIYDLSYLGTLNNAYII 959
Score = 98 (39.6 bits), Expect = 7.4e-33, Sum P(3) = 7.4e-33
Identities = 38/138 (27%), Positives = 60/138 (43%)
Query: 56 ISVIVEGATIARMSYEAINNAGVLNKALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHE 115
I++I +G M+ EA+N LN + ++++ L A S + G
Sbjct: 623 IAIIGDGGLTGGMALEALNYISFLNSKILIIYNDNGQVSLPTNAVSISGNRP-IGSISDH 681
Query: 116 IDAFSREIEAG------SRAC----FFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPG 165
+ F IEA S+ FE+L YIG V+G+N E+L VL +K
Sbjct: 682 LHYFVSNIEANAGDNKLSKNAKENNIFENLNYDYIGVVNGNNTEELFKVLNNIKENKLKR 741
Query: 166 AVLIHVITEKEKAMLPLK 183
A ++HV T+K + K
Sbjct: 742 ATVLHVRTKKSNDFINSK 759
Score = 69 (29.3 bits), Expect = 7.4e-33, Sum P(3) = 7.4e-33
Identities = 12/18 (66%), Positives = 16/18 (88%)
Query: 11 ENVHDAFGVGHSSTSISA 28
E+++D FG GHSSTS+SA
Sbjct: 521 ESIYDKFGAGHSSTSLSA 538
Score = 41 (19.5 bits), Expect = 4.3e-22, Sum P(2) = 4.3e-22
Identities = 26/125 (20%), Positives = 56/125 (44%)
Query: 81 KALKRLHSNPQFRQLCQEAFSSKDKKQKFGGQMHEIDAFSR-EIEAGSRACFFEDLGLYY 139
K + L+ + + + S+D K+ + +ID ++ E E + F + G+Y
Sbjct: 339 KEIYELYVERNIPEYYERKYFSEDIKKSV---LFDIDKYNDVEFEKAIKEEFINN-GVY- 393
Query: 140 IGPVDG-HNLEDLAYVLKQVKAIPDPGAVLIHV---ITEKEKAMLPLKLQQTRLFCKILD 195
I +D + ++ ++K++ P LI+ + + +K LPL + ++F +
Sbjct: 394 INNIDNTYYKKENILIMKKILHY-FPLLKLINNPSDLKKLKKQYLPLLAHELKIFLFFIV 452
Query: 196 NRMGG 200
N GG
Sbjct: 453 NITGG 457
>UNIPROTKB|P0A554 [details] [associations]
symbol:dxs "1-deoxy-D-xylulose-5-phosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0008661
"1-deoxy-D-xylulose-5-phosphate synthase activity" evidence=IDA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=IDA] [GO:0030145
"manganese ion binding" evidence=IDA] [GO:0030975 "thiamine
binding" evidence=IDA] [GO:0040007 "growth" evidence=IMP]
UniPathway:UPA00064 HAMAP:MF_00315 InterPro:IPR005476
InterPro:IPR005477 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF13292 Pfam:PF02779 InterPro:IPR005474
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842580 GO:GO:0000287 GO:GO:0030145
GO:GO:0016114 GO:GO:0009228 Gene3D:3.40.50.920 InterPro:IPR005475
SMART:SM00861 SUPFAM:SSF52922 GO:GO:0019288 eggNOG:COG1154
KO:K01662 OMA:PVAYHGP ProtClustDB:PRK05444 GO:GO:0008661
GO:GO:0052865 InterPro:IPR020826 TIGRFAMs:TIGR00204 PROSITE:PS00801
PROSITE:PS00802 PIR:E70528 RefSeq:NP_337257.1 RefSeq:YP_006516126.1
RefSeq:YP_177898.1 ProteinModelPortal:P0A554 SMR:P0A554
PRIDE:P0A554 EnsemblBacteria:EBMYCT00000003114
EnsemblBacteria:EBMYCT00000069695 GeneID:13319409 GeneID:887461
GeneID:925530 KEGG:mtc:MT2756 KEGG:mtu:Rv2682c KEGG:mtv:RVBD_2682c
PATRIC:18127798 TubercuList:Rv2682c HOGENOM:HOG000012986
BindingDB:P0A554 ChEMBL:CHEMBL5091 GO:GO:0030975 Uniprot:P0A554
Length = 638
Score = 284 (105.0 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 57/103 (55%), Positives = 70/103 (67%)
Query: 198 MGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRCFDQVAH 257
M G TGL F + FP R FDVGIAEQHA+T AAGLA GL P AIYS+FL R FDQ+
Sbjct: 341 MPGPTGLTAFGQRFPDRLFDVGIAEQHAMTSAAGLAMGGLHPVVAIYSTFLNRAFDQIMM 400
Query: 258 DVDLQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVV 300
DV L KLPV +DRAG+ G+DG +H G +D + + +P + V
Sbjct: 401 DVALHKLPVTMVLDRAGITGSDGASHNGMWDLSMLGIVPGIRV 443
Score = 104 (41.7 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 37/142 (26%), Positives = 54/142 (38%)
Query: 119 FSREIEAG-----SRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIPDPGAVLIHVIT 173
F ++AG S F DLGL Y+GPVDGH+ + L+ + P V++HV+T
Sbjct: 221 FLHSVKAGIKDSLSPQLLFTDLGLKYVGPVDGHDERAVEVALRSARRFGAP--VIVHVVT 278
Query: 174 EKEKAMLPLKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFD--VGIAEQHAVTFAAG 231
K P + Q + G + + D +G A++ A
Sbjct: 279 RKGMGYPPAEADQAEQMHSTVPIDPATGQATKVAGPGWTATFSDALIGYAQKRRDIVAIT 338
Query: 232 LAAEGLKPFCAIYSSFLQRCFD 253
A G A F R FD
Sbjct: 339 AAMPGPTGLTAFGQRFPDRLFD 360
Score = 74 (31.1 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 41 GMAVGRDLLG-KNNHVISVIVEGATIARMSYEAINN 75
G+A +L G +N HV++V+ +GA M +EA+NN
Sbjct: 123 GLAKAFELTGHRNRHVVAVVGDGALTGGMCWEALNN 158
>TIGR_CMR|GSU_2918 [details] [associations]
symbol:GSU_2918 "transketolase, C-terminal subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004802
"transketolase activity" evidence=ISS] [GO:0006098
"pentose-phosphate shunt" evidence=ISS] InterPro:IPR005476
InterPro:IPR009014 InterPro:IPR015941 Pfam:PF02780 Pfam:PF02779
GO:GO:0003824 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
KO:K00615 HSSP:P23254 HOGENOM:HOG000243869 OMA:IACGIMV
RefSeq:NP_953960.1 ProteinModelPortal:Q748T3 GeneID:2688545
KEGG:gsu:GSU2918 PATRIC:22028695 ProtClustDB:CLSK829003
BioCyc:GSUL243231:GH27-2921-MONOMER Uniprot:Q748T3
Length = 314
Score = 177 (67.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 42/111 (37%), Positives = 61/111 (54%)
Query: 193 ILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSF-LQRC 251
+LD + G T ++F K FP R F++GIAE + V AAGLAA G PF + ++ F + R
Sbjct: 27 VLDADLSGSTKTSVFAKKFPDRFFNMGIAEANMVGTAAGLAAAGKIPFVSTFAIFAVGRA 86
Query: 252 FDQVAHDVDLQKLPVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVVM 301
++QV + K V+ G+ VG DG +H D M +PNM V+
Sbjct: 87 WEQVRQSLAYPKANVKVVATHGGITVGEDGGSHQSVEDIAIMRAVPNMTVI 137
>UNIPROTKB|Q3AFP6 [details] [associations]
symbol:CHY_0166 "Putative transketolase, C-terminal
subunit" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004802 "transketolase activity" evidence=ISS] [GO:0006098
"pentose-phosphate shunt" evidence=ISS] InterPro:IPR005476
InterPro:IPR009014 InterPro:IPR015941 Pfam:PF02780 Pfam:PF02779
GO:GO:0006098 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
KO:K00615 InterPro:IPR020826 PROSITE:PS00802 GO:GO:0004802
RefSeq:YP_359038.1 ProteinModelPortal:Q3AFP6 STRING:Q3AFP6
GeneID:3728326 KEGG:chy:CHY_0166 PATRIC:21273517 eggNOG:COG3958
HOGENOM:HOG000243869 OMA:IACGIMV BioCyc:CHYD246194:GJCN-167-MONOMER
Uniprot:Q3AFP6
Length = 312
Score = 176 (67.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 46/126 (36%), Positives = 68/126 (53%)
Query: 177 KAMLPLKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEG 236
KA++ L + ++ +LD + T + F K FP R F++GIAEQ+ + AAGL+ G
Sbjct: 12 KALVELGQENPKIV--VLDADLSKSTKTSDFAKAFPERFFNMGIAEQNLMGVAAGLSTVG 69
Query: 237 LKPFCAIYSSFLQ-RCFDQVAHDVDLQKLPVRFAIDRAGL-VGADGPTHCGAFDTTFMAC 294
PF + ++ F R F+ + + + KL V+ A AGL VG DG +H D M
Sbjct: 70 KIPFASTFAVFAAGRAFEIIRNSICYPKLNVKIAATHAGLTVGEDGASHQAIEDLALMRV 129
Query: 295 LPNMVV 300
LPNM V
Sbjct: 130 LPNMQV 135
>TIGR_CMR|CHY_0166 [details] [associations]
symbol:CHY_0166 "putative transketolase, C-terminal
subunit" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004802 "transketolase activity" evidence=ISS] [GO:0006098
"pentose-phosphate shunt" evidence=ISS] InterPro:IPR005476
InterPro:IPR009014 InterPro:IPR015941 Pfam:PF02780 Pfam:PF02779
GO:GO:0006098 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
KO:K00615 InterPro:IPR020826 PROSITE:PS00802 GO:GO:0004802
RefSeq:YP_359038.1 ProteinModelPortal:Q3AFP6 STRING:Q3AFP6
GeneID:3728326 KEGG:chy:CHY_0166 PATRIC:21273517 eggNOG:COG3958
HOGENOM:HOG000243869 OMA:IACGIMV BioCyc:CHYD246194:GJCN-167-MONOMER
Uniprot:Q3AFP6
Length = 312
Score = 176 (67.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 46/126 (36%), Positives = 68/126 (53%)
Query: 177 KAMLPLKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEG 236
KA++ L + ++ +LD + T + F K FP R F++GIAEQ+ + AAGL+ G
Sbjct: 12 KALVELGQENPKIV--VLDADLSKSTKTSDFAKAFPERFFNMGIAEQNLMGVAAGLSTVG 69
Query: 237 LKPFCAIYSSFLQ-RCFDQVAHDVDLQKLPVRFAIDRAGL-VGADGPTHCGAFDTTFMAC 294
PF + ++ F R F+ + + + KL V+ A AGL VG DG +H D M
Sbjct: 70 KIPFASTFAVFAAGRAFEIIRNSICYPKLNVKIAATHAGLTVGEDGASHQAIEDLALMRV 129
Query: 295 LPNMVV 300
LPNM V
Sbjct: 130 LPNMQV 135
>UNIPROTKB|Q48M55 [details] [associations]
symbol:PSPPH_1255 "Transketolase, C-terminal subunit,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0004802 "transketolase activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006098
"pentose-phosphate shunt" evidence=ISS] InterPro:IPR005476
InterPro:IPR009014 InterPro:IPR015941 Pfam:PF02780 Pfam:PF02779
GO:GO:0005737 GO:GO:0006098 EMBL:CP000058 GenomeReviews:CP000058_GR
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
KO:K00615 GO:GO:0004802 eggNOG:COG3958 HOGENOM:HOG000243869
RefSeq:YP_273517.1 ProteinModelPortal:Q48M55 STRING:Q48M55
GeneID:3556853 KEGG:psp:PSPPH_1255 PATRIC:19971625 OMA:IVDPCDA
ProtClustDB:CLSK2525608 Uniprot:Q48M55
Length = 339
Score = 147 (56.8 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 202 TGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFL-QRCFDQVAHDVD 260
T L++F K P R + +G+AEQ ++ AAG+A EG PF Y+ F +R +D + +
Sbjct: 64 TDLHIFAKAHPERFYQMGMAEQLLMSAAAGMAREGFVPFATTYAVFASRRAYDFICMAIA 123
Query: 261 LQKLPVRFAIDRAGLVGADGPTHCGAFDTTFMACLPNMVVM 301
L V+ GL GP+H D +PN++++
Sbjct: 124 EDNLNVKIVCGLPGLTTGYGPSHQATDDLAIFRAMPNLMIV 164
>MGI|MGI:1921669 [details] [associations]
symbol:Tktl2 "transketolase-like 2" species:10090 "Mus
musculus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004802 "transketolase activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR005476 InterPro:IPR009014
InterPro:IPR015941 Pfam:PF02780 Pfam:PF00456 Pfam:PF02779
MGI:MGI:1921669 InterPro:IPR005474 GO:GO:0005737 GO:GO:0046872
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
KO:K00615 InterPro:IPR020826 PROSITE:PS00801 PROSITE:PS00802
GO:GO:0004802 eggNOG:COG0021 GeneTree:ENSGT00390000005240
HOGENOM:HOG000243868 HOVERGEN:HBG004036 OrthoDB:EOG4R23TG
HSSP:P0AFG8 CTD:84076 EMBL:AK016603 EMBL:BC132110 EMBL:BC132298
IPI:IPI00317015 RefSeq:NP_001258503.1 RefSeq:NP_083203.2
UniGene:Mm.483407 UniGene:Mm.487219 ProteinModelPortal:Q9D4D4
SMR:Q9D4D4 STRING:Q9D4D4 PhosphoSite:Q9D4D4 PaxDb:Q9D4D4
PRIDE:Q9D4D4 Ensembl:ENSMUST00000002025 GeneID:74419 KEGG:mmu:74419
UCSC:uc009lvq.1 InParanoid:Q9D4D4 NextBio:340709 Bgee:Q9D4D4
CleanEx:MM_TKTL2 Genevestigator:Q9D4D4 Uniprot:Q9D4D4
Length = 627
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 46/157 (29%), Positives = 69/157 (43%)
Query: 148 LEDLAYV-LKQVKAIPDPGAVLIHVITEKEKAMLPL-KLQQTRLFCKILDNRMGGGTGLN 205
+ED + + K P L +I +E L L KL Q+ +LD T
Sbjct: 295 IEDSPRISMSNTKMTSLPVYKLGDMIATREAYGLALAKLGQSNQRVIVLDGDTKNSTFSE 354
Query: 206 LFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK-PFCAIYSSFLQRCFDQVAHDVDLQKL 264
+F+K P R + IAEQ+ V+ A G A G F + +++FL R FDQ+ + +
Sbjct: 355 VFKKEHPERFIECFIAEQNMVSVALGCATRGRTIAFVSTFAAFLTRAFDQIRMGA-ISQT 413
Query: 265 PVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
+ F G+ VG DGP+ D +PN V
Sbjct: 414 NINFVGSHCGVSVGEDGPSQMALEDLAMFRSIPNCTV 450
>UNIPROTKB|F1PE28 [details] [associations]
symbol:TKT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048037 "cofactor binding" evidence=IEA]
[GO:0046166 "glyceraldehyde-3-phosphate biosynthetic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004802 "transketolase
activity" evidence=IEA] InterPro:IPR005476 InterPro:IPR009014
InterPro:IPR015941 Pfam:PF02780 Pfam:PF00456 Pfam:PF02779
InterPro:IPR005474 GO:GO:0005634 GO:GO:0048037 GO:GO:0040008
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
InterPro:IPR020826 PROSITE:PS00802 GO:GO:0004802
GeneTree:ENSGT00390000005240 OMA:EAFGWHT GO:GO:0046166
EMBL:AAEX03012187 Ensembl:ENSCAFT00000013737 Uniprot:F1PE28
Length = 576
Score = 129 (50.5 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 37/144 (25%), Positives = 59/144 (40%)
Query: 161 IPDPGAVLI--HVITEKEKAMLPLKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDV 218
+P P + + + T K KL + LD T +F+K P R +
Sbjct: 256 MPSPPSYKVGDKIATRKAYGQALAKLGRAHDRIIALDGDTKNSTFSEIFRKEHPDRFIEC 315
Query: 219 GIAEQHAVTFAAGLAAEGLK-PFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL-V 276
IAEQ+ V+ A G A PFC+ + +F R FDQ+ + + + F G+ +
Sbjct: 316 YIAEQNMVSVAVGCATRNRTVPFCSAFGAFFTRAFDQIRMAA-ISESNINFCGSHCGVSI 374
Query: 277 GADGPTHCGAFDTTFMACLPNMVV 300
G DGP+ D +P +
Sbjct: 375 GEDGPSQMALEDLAMFRSIPTATI 398
Score = 48 (22.0 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 122 EIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIP 162
+++ + C E G + + VDGH++E+L Q K P
Sbjct: 151 QVDVYQKRC--ESFGWHAV-IVDGHSVEELCKAFGQAKHQP 188
>UNIPROTKB|A7E3W4 [details] [associations]
symbol:TKT "Transketolase" species:9913 "Bos taurus"
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR005476
InterPro:IPR009014 InterPro:IPR015941 Pfam:PF02780 Pfam:PF00456
Pfam:PF02779 InterPro:IPR005474 GO:GO:0003824 Gene3D:3.40.50.920
InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922 InterPro:IPR020826
PROSITE:PS00802 GeneTree:ENSGT00390000005240 HOGENOM:HOG000243868
HOVERGEN:HBG004036 UniGene:Bt.4750 EMBL:DAAA02054363 EMBL:BT030735
IPI:IPI00904104 STRING:A7E3W4 Ensembl:ENSBTAT00000052142
Uniprot:A7E3W4
Length = 596
Score = 126 (49.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 194 LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA-EGLKPFCAIYSSFLQRCF 252
LD T LF+K P R + IAEQ+ V+ A G A + PFC+ +++F R F
Sbjct: 311 LDGDTKNSTFSELFKKEHPDRFIECYIAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAF 370
Query: 253 DQVAHDVDLQKLPVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
DQ+ + + + G+ +G DGP+ D +P V
Sbjct: 371 DQIRMAA-ISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSIPTSTV 418
Score = 49 (22.3 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 143 VDGHNLEDLAYVLKQVKAIP 162
VDGH++E+L QVK P
Sbjct: 189 VDGHSVEELCKAFGQVKNQP 208
>UNIPROTKB|A7Z014 [details] [associations]
symbol:TKT "TKT protein" species:9913 "Bos taurus"
[GO:0048037 "cofactor binding" evidence=IEA] [GO:0046166
"glyceraldehyde-3-phosphate biosynthetic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0040008 "regulation of growth" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004802 "transketolase activity"
evidence=IEA] InterPro:IPR005476 InterPro:IPR009014
InterPro:IPR015941 Pfam:PF02780 Pfam:PF00456 Pfam:PF02779
InterPro:IPR005474 GO:GO:0005634 GO:GO:0048037 GO:GO:0040008
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
InterPro:IPR020826 PROSITE:PS00801 PROSITE:PS00802 GO:GO:0004802
GeneTree:ENSGT00390000005240 HOVERGEN:HBG004036 IPI:IPI00718109
UniGene:Bt.4750 OMA:EAFGWHT GO:GO:0046166 EMBL:DAAA02054363
EMBL:BC151562 EMBL:BC153211 STRING:A7Z014
Ensembl:ENSBTAT00000004892 InParanoid:A7Z014 Uniprot:A7Z014
Length = 623
Score = 126 (49.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 194 LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA-EGLKPFCAIYSSFLQRCF 252
LD T LF+K P R + IAEQ+ V+ A G A + PFC+ +++F R F
Sbjct: 338 LDGDTKNSTFSELFKKEHPDRFIECYIAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAF 397
Query: 253 DQVAHDVDLQKLPVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
DQ+ + + + G+ +G DGP+ D +P V
Sbjct: 398 DQIRMAA-ISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSIPTSTV 445
Score = 49 (22.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 143 VDGHNLEDLAYVLKQVKAIP 162
VDGH++E+L QVK P
Sbjct: 216 VDGHSVEELCKAFGQVKNQP 235
>RGD|1304767 [details] [associations]
symbol:Tktl2 "transketolase-like 2" species:10116 "Rattus
norvegicus" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR005476
InterPro:IPR009014 InterPro:IPR015941 Pfam:PF02780 Pfam:PF00456
Pfam:PF02779 RGD:1304767 InterPro:IPR005474 GO:GO:0005737
GO:GO:0003824 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 KO:K00615 InterPro:IPR020826 PROSITE:PS00802
GeneTree:ENSGT00390000005240 OrthoDB:EOG4R23TG CTD:84076
OMA:THADFEV EMBL:CH474045 IPI:IPI00201522 RefSeq:NP_001099550.1
UniGene:Rn.124739 Ensembl:ENSRNOT00000018987 GeneID:290685
KEGG:rno:290685 UCSC:RGD:1304767 NextBio:631504 Uniprot:D3ZHE7
Length = 627
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 43/157 (27%), Positives = 68/157 (43%)
Query: 148 LEDLAYV-LKQVKAIPDPGAVLIHVITEKEKAMLPL-KLQQTRLFCKILDNRMGGGTGLN 205
+ED + + K P L +I +E + L KL + +LD T
Sbjct: 295 VEDSPRISISNTKMTSLPAYKLGDMIATREAYGVALAKLGHSNQRVIVLDGDTKNSTFSE 354
Query: 206 LFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK-PFCAIYSSFLQRCFDQVAHDVDLQKL 264
+F+K P R + IAEQ+ V+ A G A G F + +++FL R FDQ+ + +
Sbjct: 355 VFKKEHPERFIECFIAEQNMVSVALGCATRGRTIAFVSTFAAFLTRAFDQIRMGA-ISQT 413
Query: 265 PVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
V F G+ +G DGP+ D +PN +
Sbjct: 414 NVNFVGSHCGVSIGEDGPSQMALEDLAMFRSIPNCTI 450
>UNIPROTKB|Q6B855 [details] [associations]
symbol:TKT "Transketolase" species:9913 "Bos taurus"
[GO:0004802 "transketolase activity" evidence=ISS] [GO:0040008
"regulation of growth" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR005476 InterPro:IPR009014
InterPro:IPR015941 Pfam:PF02780 Pfam:PF00456 Pfam:PF02779
InterPro:IPR005474 GO:GO:0046872 GO:GO:0040008 Gene3D:3.40.50.920
InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922 KO:K00615
InterPro:IPR020826 PROSITE:PS00801 PROSITE:PS00802 GO:GO:0004802
eggNOG:COG0021 HOGENOM:HOG000243868 HOVERGEN:HBG004036
OrthoDB:EOG4R23TG EMBL:AY675082 IPI:IPI00718109
RefSeq:NP_001003906.1 UniGene:Bt.4750 ProteinModelPortal:Q6B855
STRING:Q6B855 PRIDE:Q6B855 GeneID:445425 KEGG:bta:445425 CTD:7086
InParanoid:Q6B855 NextBio:20832128 Uniprot:Q6B855
Length = 623
Score = 124 (48.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 194 LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA-EGLKPFCAIYSSFLQRCF 252
LD T LF+K P R + IAEQ+ V+ A G A + PFC+ +++F R F
Sbjct: 338 LDGDTKNSTFSELFKKEHPDRFIECYIAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAF 397
Query: 253 DQVAHDVDLQKLPVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
DQ+ + + + G+ +G DGP+ D +P V
Sbjct: 398 DQIRMAA-ISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSIPMSTV 445
Score = 49 (22.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 143 VDGHNLEDLAYVLKQVKAIP 162
VDGH++E+L QVK P
Sbjct: 216 VDGHSVEELCKAFGQVKNQP 235
>UNIPROTKB|A8U4R4 [details] [associations]
symbol:tkt "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048037 "cofactor binding" evidence=IEA] [GO:0046166
"glyceraldehyde-3-phosphate biosynthetic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0040008 "regulation of growth" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004802 "transketolase activity"
evidence=IEA] InterPro:IPR005476 InterPro:IPR009014
InterPro:IPR015941 Pfam:PF02780 Pfam:PF00456 Pfam:PF02779
InterPro:IPR005474 GO:GO:0005634 GO:GO:0048037 GO:GO:0040008
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
KO:K00615 InterPro:IPR020826 PROSITE:PS00801 PROSITE:PS00802
GO:GO:0004802 GeneTree:ENSGT00390000005240 HOVERGEN:HBG004036
CTD:7086 OMA:EAFGWHT GO:GO:0046166 EMBL:FP236304 EMBL:EU103619
RefSeq:NP_001106151.1 UniGene:Ssc.54189 Ensembl:ENSSSCT00000025213
GeneID:100127150 KEGG:ssc:100127150 Uniprot:A8U4R4
Length = 623
Score = 123 (48.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 32/109 (29%), Positives = 48/109 (44%)
Query: 194 LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK-PFCAIYSSFLQRCF 252
LD T LF+K P R + IAEQ+ V+ A G A PFC+ +++F R F
Sbjct: 338 LDGDTKNSTFSELFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAF 397
Query: 253 DQVAHDVDLQKLPVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
DQ+ + + + G+ +G DGP+ D +P V
Sbjct: 398 DQIRMAA-ISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPMSTV 445
Score = 50 (22.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 114 HEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIP 162
H++D + + EA G + I VDGH++E+L QVK P
Sbjct: 197 HQMDVYQKRCEA---------FGWHAI-IVDGHSVEELCKAFGQVKNQP 235
>MGI|MGI:105992 [details] [associations]
symbol:Tkt "transketolase" species:10090 "Mus musculus"
[GO:0000287 "magnesium ion binding" evidence=ISO] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004802 "transketolase
activity" evidence=ISO;IDA] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=ISO]
[GO:0006098 "pentose-phosphate shunt" evidence=ISO] [GO:0008152
"metabolic process" evidence=IDA] [GO:0009052 "pentose-phosphate
shunt, non-oxidative branch" evidence=ISO] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=ISO] [GO:0030976 "thiamine pyrophosphate binding"
evidence=ISO] [GO:0040008 "regulation of growth" evidence=IMP]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0046166 "glyceraldehyde-3-phosphate biosynthetic
process" evidence=ISO] [GO:0046390 "ribose phosphate biosynthetic
process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048029 "monosaccharide binding" evidence=ISO]
[GO:0048037 "cofactor binding" evidence=ISO] InterPro:IPR005476
InterPro:IPR009014 InterPro:IPR015941 Pfam:PF02780 Pfam:PF00456
Pfam:PF02779 MGI:MGI:105992 InterPro:IPR005474 GO:GO:0005634
GO:GO:0005777 GO:GO:0005789 GO:GO:0000287 GO:GO:0048029
GO:GO:0040008 GO:GO:0030976 Gene3D:3.40.50.920 InterPro:IPR005475
SMART:SM00861 SUPFAM:SSF52922 KO:K00615 CleanEx:MM_TKT
InterPro:IPR020826 PROSITE:PS00801 PROSITE:PS00802 GO:GO:0046390
GO:GO:0004802 GO:GO:0009052 eggNOG:COG0021
GeneTree:ENSGT00390000005240 HOGENOM:HOG000243868
HOVERGEN:HBG004036 OrthoDB:EOG4R23TG CTD:7086 OMA:EAFGWHT
ChiTaRS:TKT GO:GO:0046166 EMBL:U05809 EMBL:AK002627 EMBL:AK012794
EMBL:AK030446 EMBL:AK140965 EMBL:AK144146 EMBL:AK146157
EMBL:AK150139 EMBL:AK150769 EMBL:AK150844 EMBL:AK150856
EMBL:AK152460 EMBL:AK159922 EMBL:AK167084 EMBL:BC055336 EMBL:U90889
EMBL:AF195533 IPI:IPI00137409 RefSeq:NP_033414.1 UniGene:Mm.290692
ProteinModelPortal:P40142 SMR:P40142 IntAct:P40142
MINT:MINT-1855010 STRING:P40142 PhosphoSite:P40142
REPRODUCTION-2DPAGE:P40142 SWISS-2DPAGE:P40142 PaxDb:P40142
PRIDE:P40142 Ensembl:ENSMUST00000022529 GeneID:21881 KEGG:mmu:21881
UCSC:uc007svc.1 InParanoid:P40142 NextBio:301390 Bgee:P40142
Genevestigator:P40142 GermOnline:ENSMUSG00000021957 Uniprot:P40142
Length = 623
Score = 124 (48.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 38/144 (26%), Positives = 60/144 (41%)
Query: 161 IPDPGAVLI--HVITEKEKAMLPLKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDV 218
+P P + + + T K + KL LD T LF+K P R +
Sbjct: 303 MPTPPSYKVGDKIATRKAYGLALAKLGHASDRIIALDGDTKNSTFSELFKKEHPDRFIEC 362
Query: 219 GIAEQHAVTFAAGLAA-EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL-V 276
IAEQ+ V+ A G A + PFC+ +++F R FDQ+ + + + G+ +
Sbjct: 363 YIAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAFDQIRMAA-ISESNINLCGSHCGVSI 421
Query: 277 GADGPTHCGAFDTTFMACLPNMVV 300
G DGP+ D +P V
Sbjct: 422 GEDGPSQMALEDLAMFRSVPMSTV 445
Score = 47 (21.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 114 HEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIP 162
H++D + + EA G + I VDGH++E+L Q K P
Sbjct: 197 HQVDIYQKRCEA---------FGWHTI-IVDGHSVEELCKAFGQAKHQP 235
>RGD|621036 [details] [associations]
symbol:Tkt "transketolase" species:10116 "Rattus norvegicus"
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004802 "transketolase
activity" evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0006098 "pentose-phosphate
shunt" evidence=IDA] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0009052 "pentose-phosphate shunt, non-oxidative branch"
evidence=IDA] [GO:0030246 "carbohydrate binding" evidence=IDA]
[GO:0030976 "thiamine pyrophosphate binding" evidence=IDA]
[GO:0040008 "regulation of growth" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0046166 "glyceraldehyde-3-phosphate biosynthetic process"
evidence=ISO] [GO:0046390 "ribose phosphate biosynthetic process"
evidence=IDA] [GO:0048029 "monosaccharide binding" evidence=IDA]
[GO:0048037 "cofactor binding" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR005476 InterPro:IPR009014
InterPro:IPR015941 Pfam:PF02780 EMBL:U09256 Pfam:PF00456
Pfam:PF02779 RGD:621036 InterPro:IPR005474 GO:GO:0005634
GO:GO:0005777 GO:GO:0005789 GO:GO:0000287 GO:GO:0048029
GO:GO:0040008 GO:GO:0030976 Gene3D:3.40.50.920 InterPro:IPR005475
SMART:SM00861 SUPFAM:SSF52922 KO:K00615 InterPro:IPR020826
PROSITE:PS00801 PROSITE:PS00802 GO:GO:0046390 GO:GO:0004802
GO:GO:0009052 eggNOG:COG0021 HOGENOM:HOG000243868
HOVERGEN:HBG004036 OrthoDB:EOG4R23TG CTD:7086 GO:GO:0046166
IPI:IPI00231139 RefSeq:NP_072114.1 UniGene:Rn.5950
ProteinModelPortal:P50137 IntAct:P50137 MINT:MINT-4566297
STRING:P50137 PhosphoSite:P50137 World-2DPAGE:0004:P50137
PRIDE:P50137 GeneID:64524 KEGG:rno:64524 UCSC:RGD:621036
InParanoid:P50137 SABIO-RK:P50137 NextBio:613342
Genevestigator:P50137 GermOnline:ENSRNOG00000016064 Uniprot:P50137
Length = 623
Score = 123 (48.4 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 194 LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAA-EGLKPFCAIYSSFLQRCF 252
LD T LF+K P R + IAEQ+ V+ A G A + PFC+ +++F R F
Sbjct: 338 LDGDTKNSTFSELFKKEHPDRFIECYIAEQNMVSIAVGCATRDRTVPFCSTFAAFFTRAF 397
Query: 253 DQVAHDVDLQKLPVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
DQ+ + + + G+ +G DGP+ D +P V
Sbjct: 398 DQIRMAA-ISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPMSTV 445
Score = 48 (22.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 114 HEIDAFSREIEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIP 162
H++D + + EA G + I VDGH++E+L Q K P
Sbjct: 197 HQVDVYQKRCEA---------FGWHAI-IVDGHSVEELCKAFGQAKHQP 235
>UNIPROTKB|F1P1A5 [details] [associations]
symbol:TKT "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004802 "transketolase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0046166 "glyceraldehyde-3-phosphate
biosynthetic process" evidence=IEA] [GO:0048037 "cofactor binding"
evidence=IEA] InterPro:IPR005476 InterPro:IPR009014
InterPro:IPR015941 Pfam:PF02780 Pfam:PF00456 Pfam:PF02779
InterPro:IPR005474 GO:GO:0005634 GO:GO:0048037 GO:GO:0040008
Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922
PROSITE:PS00801 GO:GO:0004802 GeneTree:ENSGT00390000005240
OMA:EAFGWHT GO:GO:0046166 EMBL:AADN02013981 EMBL:AADN02013979
EMBL:AADN02013980 IPI:IPI00586155 Ensembl:ENSGALT00000008512
Uniprot:F1P1A5
Length = 630
Score = 123 (48.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 42/157 (26%), Positives = 66/157 (42%)
Query: 149 EDLAYV-LKQVKAIPDPGAVLIHV--ITEKEKAMLPLKLQQTRLFCKILDNRMGGGTGLN 205
ED V ++ +K +P P + + T K + KL LD T
Sbjct: 292 EDAPVVNIRNIK-MPSPPSYKVGEKWATRKAYGLALAKLGHANDRVIALDGDTKNSTFSE 350
Query: 206 LFQKHFPIRCFDVGIAEQHAVTFAAGLAA-EGLKPFCAIYSSFLQRCFDQVAHDVDLQKL 264
LF+K P R + IAEQ+ V+ A G A + F + +++F R FDQ+ + +
Sbjct: 351 LFKKDHPSRYIECYIAEQNMVSVAVGCATRDRTVAFASTFATFFTRAFDQIRMAA-ISES 409
Query: 265 PVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
+ G+ +G DGP+ G D +PN V
Sbjct: 410 NINLCGSHCGVSIGEDGPSQMGLEDLCMFRAIPNATV 446
Score = 47 (21.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 123 IEAGSRACFFEDLGLYYIGPVDGHNLEDLAYVLKQVKAIP 162
+E + C E G + I VDGH++E+L Q K P
Sbjct: 200 VEIYQKRC--EAFGWHAI-IVDGHSVEELCKAFGQAKHQP 236
>UNIPROTKB|B4E022 [details] [associations]
symbol:TKT "Transketolase" species:9606 "Homo sapiens"
[GO:0004802 "transketolase activity" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR005476 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF00456 Pfam:PF02779 InterPro:IPR005474
GO:GO:0005634 GO:GO:0005777 GO:GO:0005789 GO:GO:0000287
GO:GO:0048029 GO:GO:0040008 GO:GO:0030976 Gene3D:3.40.50.920
InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922 EMBL:AC097015
InterPro:IPR020826 PROSITE:PS00802 GO:GO:0046390 GO:GO:0004802
GO:GO:0009052 HOVERGEN:HBG004036 UniGene:Hs.89643 HGNC:HGNC:11834
ChiTaRS:TKT EMBL:AK303191 IPI:IPI00946864 SMR:B4E022 STRING:B4E022
Ensembl:ENST00000296289 Uniprot:B4E022
Length = 576
Score = 123 (48.4 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 31/109 (28%), Positives = 48/109 (44%)
Query: 194 LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK-PFCAIYSSFLQRCF 252
LD T +F+K P R + IAEQ+ V+ A G A PFC+ +++F R F
Sbjct: 291 LDGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAF 350
Query: 253 DQVAHDVDLQKLPVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
DQ+ + + + G+ +G DGP+ D +P V
Sbjct: 351 DQIRMAA-ISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTV 398
Score = 45 (20.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 143 VDGHNLEDLAYVLKQVKAIP 162
VDGH++E+L Q K P
Sbjct: 169 VDGHSVEELCKAFGQAKHQP 188
>UNIPROTKB|P29401 [details] [associations]
symbol:TKT "Transketolase" species:9606 "Homo sapiens"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0004802 "transketolase activity"
evidence=EXP;IDA] [GO:0048037 "cofactor binding" evidence=IDA]
[GO:0046166 "glyceraldehyde-3-phosphate biosynthetic process"
evidence=IDA] [GO:0009052 "pentose-phosphate shunt, non-oxidative
branch" evidence=NAS] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0005999 "xylulose biosynthetic process" evidence=TAS]
[GO:0006098 "pentose-phosphate shunt" evidence=TAS] [GO:0006112
"energy reserve metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR005476 InterPro:IPR009014
InterPro:IPR015941 Pfam:PF02780 Pfam:PF00456 Pfam:PF02779
InterPro:IPR005474 GO:GO:0005829 GO:GO:0005634 GO:GO:0042803
GO:GO:0005777 GO:GO:0005789 EMBL:CH471055 GO:GO:0000287
GO:GO:0048029 GO:GO:0006112 GO:GO:0048037 GO:GO:0040008
GO:GO:0030976 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 KO:K00615 EMBL:AC097015 CleanEx:HS_TKT
InterPro:IPR020826 PROSITE:PS00801 PROSITE:PS00802 GO:GO:0046390
GO:GO:0004802 GO:GO:0009052 GO:GO:0005999 DrugBank:DB00152
eggNOG:COG0021 HOGENOM:HOG000243868 HOVERGEN:HBG004036
OrthoDB:EOG4R23TG CTD:7086 EMBL:X67688 EMBL:L12711 EMBL:U55017
EMBL:AK289454 EMBL:AK293438 EMBL:BC008615 EMBL:BC009970
EMBL:BC024026 IPI:IPI00643920 IPI:IPI00942979 PIR:A45050
RefSeq:NP_001055.1 RefSeq:NP_001128527.1 RefSeq:NP_001244957.1
UniGene:Hs.89643 PDB:3MOS PDB:3OOY PDBsum:3MOS PDBsum:3OOY
ProteinModelPortal:P29401 SMR:P29401 IntAct:P29401
MINT:MINT-3011391 STRING:P29401 PhosphoSite:P29401 DMDM:1729976
REPRODUCTION-2DPAGE:IPI00643920 PaxDb:P29401 PRIDE:P29401
DNASU:7086 Ensembl:ENST00000423516 Ensembl:ENST00000423525
Ensembl:ENST00000462138 GeneID:7086 KEGG:hsa:7086 UCSC:uc003dgo.3
GeneCards:GC03M053233 HGNC:HGNC:11834 HPA:HPA029480 HPA:HPA029481
MIM:606781 neXtProt:NX_P29401 PharmGKB:PA36537 InParanoid:P29401
PhylomeDB:P29401 SABIO-RK:P29401 BindingDB:P29401 ChEMBL:CHEMBL4983
ChiTaRS:TKT EvolutionaryTrace:P29401 GenomeRNAi:7086 NextBio:27715
ArrayExpress:P29401 Bgee:P29401 Genevestigator:P29401
GermOnline:ENSG00000163931 GO:GO:0046166 Uniprot:P29401
Length = 623
Score = 123 (48.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 31/109 (28%), Positives = 48/109 (44%)
Query: 194 LDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK-PFCAIYSSFLQRCF 252
LD T +F+K P R + IAEQ+ V+ A G A PFC+ +++F R F
Sbjct: 338 LDGDTKNSTFSEIFKKEHPDRFIECYIAEQNMVSIAVGCATRNRTVPFCSTFAAFFTRAF 397
Query: 253 DQVAHDVDLQKLPVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
DQ+ + + + G+ +G DGP+ D +P V
Sbjct: 398 DQIRMAA-ISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTV 445
Score = 45 (20.9 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 143 VDGHNLEDLAYVLKQVKAIP 162
VDGH++E+L Q K P
Sbjct: 216 VDGHSVEELCKAFGQAKHQP 235
>UNIPROTKB|I3L954 [details] [associations]
symbol:TKTL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR005476 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF00456 Pfam:PF02779 InterPro:IPR005474
GO:GO:0003824 Gene3D:3.40.50.920 InterPro:IPR005475 SMART:SM00861
SUPFAM:SSF52922 InterPro:IPR020826 PROSITE:PS00802
GeneTree:ENSGT00390000005240 Ensembl:ENSSSCT00000031565 OMA:DCALKQT
Uniprot:I3L954
Length = 553
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 37/132 (28%), Positives = 55/132 (41%)
Query: 171 VITEKEKAMLPLKLQQTRLFCKILDNRMGGGTGLNLFQKHFPIRCFDVGIAEQHAVTFAA 230
V T K + KL +LD T +F+K +P R + IAEQ+ V A
Sbjct: 252 VATRKACGLALAKLGHANDRVIVLDGDTKNSTFSEIFKKEYPERFIECFIAEQNMVNVAL 311
Query: 231 GLAA-EGLKPFCAIYSSFLQRCFDQVAHDVDLQKLPVRFAIDRAGL-VGADGPTHCGAFD 288
G A + F +++FL R FDQ+ + + + G+ VG DGP+ D
Sbjct: 312 GCATRDRTVAFVCTFAAFLTRAFDQIRVGA-IAQTNINLVGSHCGVSVGEDGPSQMALED 370
Query: 289 TTFMACLPNMVV 300
+PN V
Sbjct: 371 LAMFRAIPNCTV 382
>UNIPROTKB|Q2NL26 [details] [associations]
symbol:TKTL1 "Transketolase-like protein 1" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004802 "transketolase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR005476 InterPro:IPR009014 InterPro:IPR015941
Pfam:PF02780 Pfam:PF00456 Pfam:PF02779 InterPro:IPR005474
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 Gene3D:3.40.50.920
InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922 KO:K00615
InterPro:IPR020826 PROSITE:PS00801 PROSITE:PS00802 GO:GO:0004802
eggNOG:COG0021 GeneTree:ENSGT00390000005240 EMBL:BC111166
IPI:IPI00717695 RefSeq:NP_001039437.1 UniGene:Bt.37590
ProteinModelPortal:Q2NL26 STRING:Q2NL26 PRIDE:Q2NL26
Ensembl:ENSBTAT00000036390 GeneID:507517 KEGG:bta:507517 CTD:8277
HOGENOM:HOG000243868 HOVERGEN:HBG004036 OMA:FTKFLKY
NextBio:20868099 Uniprot:Q2NL26
Length = 596
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 38/157 (24%), Positives = 66/157 (42%)
Query: 148 LEDLAYV-LKQVKAIPDPGAVLIHVITEKEKAMLPL-KLQQTRLFCKILDNRMGGGTGLN 205
+ED + + ++ P + VI ++ L L KL +LD T +
Sbjct: 264 IEDSPQINISVIEMTSPPDYEISDVIATRKACGLALAKLGHANDRVIVLDGDTKNSTFSD 323
Query: 206 LFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK-PFCAIYSSFLQRCFDQVAHDVDLQKL 264
+F++ P R + IAEQ+ V+ A G G F +++FL R FDQ+ + +
Sbjct: 324 IFKREHPERFIECFIAEQNMVSVALGCVTRGRTVAFACTFAAFLTRAFDQIRMG-GISQT 382
Query: 265 PVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
+ G+ +G DGP+ D +PN +
Sbjct: 383 NINLIGSHCGVSIGEDGPSQMALEDLAMFRAIPNCTI 419
>UNIPROTKB|Q2NKZ4 [details] [associations]
symbol:TKTL2 "Transketolase-like protein 2" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004802
"transketolase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR005476 InterPro:IPR009014
InterPro:IPR015941 Pfam:PF02780 Pfam:PF00456 Pfam:PF02779
InterPro:IPR005474 GO:GO:0005737 GO:GO:0046872 Gene3D:3.40.50.920
InterPro:IPR005475 SMART:SM00861 SUPFAM:SSF52922 KO:K00615
InterPro:IPR020826 PROSITE:PS00801 PROSITE:PS00802 GO:GO:0004802
eggNOG:COG0021 GeneTree:ENSGT00390000005240 HOGENOM:HOG000243868
HOVERGEN:HBG004036 OrthoDB:EOG4R23TG EMBL:BC111320 IPI:IPI00717757
RefSeq:NP_001039490.1 UniGene:Bt.19091 HSSP:P0AFG8
ProteinModelPortal:Q2NKZ4 STRING:Q2NKZ4 PRIDE:Q2NKZ4
Ensembl:ENSBTAT00000011778 GeneID:509186 KEGG:bta:509186 CTD:84076
InParanoid:Q2NKZ4 OMA:CECAHVE NextBio:20868863 Uniprot:Q2NKZ4
Length = 626
Score = 121 (47.7 bits), Expect = 0.00022, P = 0.00022
Identities = 43/161 (26%), Positives = 65/161 (40%)
Query: 142 PVDGHNLEDLAYVLKQVKAIPDPGAVLIHVITEKEKAMLPLKLQQTRLFCKILDNRMGGG 201
PV+G + + ++ +PD V V T+K + KL +LD
Sbjct: 292 PVEGSPPVSITNI--KMTCLPDY-KVGDKVATQKAYGLALAKLGLANERVVVLDGDPKNS 348
Query: 202 TGLNLFQKHFPIRCFDVGIAEQHAVTFAAGLAAEGLK-PFCAIYSSFLQRCFDQVAHDVD 260
T +F+K P R + AEQ+ V+ A G A G F +FL R FDQ+
Sbjct: 349 TFFEIFKKEHPERFIECFAAEQNMVSVALGCATRGRTITFVTTLGAFLTRAFDQIRMGA- 407
Query: 261 LQKLPVRFAIDRAGL-VGADGPTHCGAFDTTFMACLPNMVV 300
+ + + G+ VG DGP+ D +PN V
Sbjct: 408 ISQSNINLIGSHCGVSVGEDGPSQMALEDLAMFRSIPNCTV 448
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.140 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 309 309 0.00079 116 3 11 22 0.46 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 585 (62 KB)
Total size of DFA: 199 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.64u 0.13s 24.77t Elapsed: 00:00:01
Total cpu time: 24.65u 0.13s 24.78t Elapsed: 00:00:01
Start: Fri May 10 05:31:45 2013 End: Fri May 10 05:31:46 2013